####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 31 ( 312), selected 31 , name T0537TS102_1-D2 # Molecule2: number of CA atoms 31 ( 254), selected 31 , name T0537-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0537TS102_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 351 - 366 4.79 14.14 LONGEST_CONTINUOUS_SEGMENT: 16 352 - 367 4.92 14.15 LCS_AVERAGE: 47.55 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 361 - 366 2.00 17.68 LONGEST_CONTINUOUS_SEGMENT: 6 362 - 367 1.57 17.45 LONGEST_CONTINUOUS_SEGMENT: 6 363 - 368 1.96 17.80 LONGEST_CONTINUOUS_SEGMENT: 6 364 - 369 1.77 19.15 LONGEST_CONTINUOUS_SEGMENT: 6 366 - 371 1.29 24.33 LONGEST_CONTINUOUS_SEGMENT: 6 373 - 378 1.79 23.26 LCS_AVERAGE: 17.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 362 - 366 0.86 16.99 LONGEST_CONTINUOUS_SEGMENT: 5 377 - 381 0.97 31.15 LCS_AVERAGE: 13.42 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 31 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 351 S 351 3 4 16 1 3 4 4 5 5 6 9 9 10 13 13 15 15 16 17 18 19 20 21 LCS_GDT A 352 A 352 3 4 16 0 3 3 4 4 4 5 7 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT E 353 E 353 3 4 16 3 3 3 4 5 5 6 9 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT E 354 E 354 3 4 16 3 3 3 4 4 6 6 9 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT L 355 L 355 4 4 16 3 4 4 4 4 5 8 9 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT G 356 G 356 4 5 16 3 4 4 4 5 6 8 9 10 12 13 14 15 15 16 16 16 17 17 18 LCS_GDT N 357 N 357 4 5 16 3 4 4 4 5 6 8 9 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT I 358 I 358 4 5 16 3 4 4 4 5 6 7 9 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT I 359 I 359 4 5 16 3 4 4 4 4 6 8 9 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT V 360 V 360 4 5 16 3 4 4 4 4 6 8 9 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT A 361 A 361 3 6 16 3 3 3 4 4 5 8 9 10 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT W 362 W 362 5 6 16 4 4 5 5 6 9 9 11 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT N 363 N 363 5 6 16 4 4 5 5 7 9 9 11 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT P 364 P 364 5 6 16 4 4 5 5 7 9 9 11 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT N 365 N 365 5 6 16 3 4 5 5 6 6 8 9 12 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT L 366 L 366 5 6 16 4 4 5 6 7 9 9 11 11 14 14 14 15 15 16 17 18 19 20 21 LCS_GDT W 367 W 367 4 6 16 3 4 5 6 7 9 9 11 11 12 12 13 14 15 16 17 18 19 20 21 LCS_GDT K 368 K 368 4 6 15 3 4 5 6 7 9 9 11 11 12 12 13 14 15 16 17 18 19 20 21 LCS_GDT K 369 K 369 4 6 15 3 4 5 6 6 6 7 11 11 12 12 13 13 14 15 16 17 17 20 21 LCS_GDT G 370 G 370 4 6 15 3 4 5 6 6 9 9 11 11 12 12 13 13 14 15 16 17 19 20 21 LCS_GDT T 371 T 371 4 6 15 3 4 5 6 7 9 9 11 11 12 12 13 14 15 15 17 18 19 20 21 LCS_GDT N 372 N 372 4 5 15 2 3 4 5 7 9 9 11 11 12 12 13 13 15 15 16 18 19 20 21 LCS_GDT G 373 G 373 4 6 15 3 4 4 5 6 8 9 11 11 12 12 13 13 13 15 16 17 17 18 20 LCS_GDT Y 374 Y 374 4 6 15 3 4 4 5 5 7 7 9 9 11 12 13 13 13 13 14 15 15 16 18 LCS_GDT P 375 P 375 4 6 14 3 4 4 5 5 7 7 9 9 9 9 10 10 10 12 12 12 13 14 15 LCS_GDT I 376 I 376 4 6 11 3 4 4 5 5 7 7 9 9 9 9 10 10 10 12 12 12 13 13 14 LCS_GDT F 377 F 377 5 6 11 3 4 5 5 5 7 7 9 9 9 9 10 10 10 12 12 12 13 13 14 LCS_GDT Q 378 Q 378 5 6 11 3 4 5 5 5 7 7 9 9 9 9 10 10 10 12 12 12 13 13 14 LCS_GDT W 379 W 379 5 5 11 3 4 5 5 5 7 7 9 9 9 9 10 10 10 12 12 12 13 13 14 LCS_GDT S 380 S 380 5 5 11 3 4 5 5 5 5 6 8 8 9 9 10 10 10 12 12 12 13 13 14 LCS_GDT E 381 E 381 5 5 11 3 3 5 5 5 5 6 6 7 8 8 9 10 10 11 11 12 13 13 14 LCS_AVERAGE LCS_A: 26.12 ( 13.42 17.38 47.55 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 5 6 7 9 9 11 12 14 14 14 15 15 16 17 18 19 20 21 GDT PERCENT_AT 12.90 12.90 16.13 19.35 22.58 29.03 29.03 35.48 38.71 45.16 45.16 45.16 48.39 48.39 51.61 54.84 58.06 61.29 64.52 67.74 GDT RMS_LOCAL 0.23 0.23 0.86 1.29 2.05 2.29 2.29 2.77 3.73 4.07 4.07 4.07 4.39 4.39 4.79 5.26 5.66 6.10 6.32 6.59 GDT RMS_ALL_AT 15.78 15.78 16.99 24.33 13.89 13.83 13.83 14.26 14.85 14.14 14.14 14.14 14.57 14.57 14.14 13.09 12.85 12.64 12.69 12.60 # Checking swapping # possible swapping detected: Y 374 Y 374 # possible swapping detected: F 377 F 377 # possible swapping detected: E 381 E 381 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA S 351 S 351 14.759 0 0.049 0.718 15.978 0.000 0.000 LGA A 352 A 352 17.428 0 0.627 0.608 17.809 0.000 0.000 LGA E 353 E 353 18.560 0 0.598 0.553 20.006 0.000 0.000 LGA E 354 E 354 17.653 0 0.046 0.192 20.727 0.000 0.000 LGA L 355 L 355 18.033 0 0.582 1.365 18.913 0.000 0.000 LGA G 356 G 356 20.874 0 0.036 0.036 20.874 0.000 0.000 LGA N 357 N 357 14.853 0 0.556 0.494 18.206 0.000 0.000 LGA I 358 I 358 11.235 0 0.052 0.065 15.110 0.357 0.179 LGA I 359 I 359 12.163 0 0.588 0.611 17.548 0.000 0.000 LGA V 360 V 360 11.354 0 0.654 1.478 13.343 1.548 0.884 LGA A 361 A 361 8.163 0 0.622 0.557 9.647 13.452 10.857 LGA W 362 W 362 3.060 0 0.641 1.328 5.144 47.738 44.150 LGA N 363 N 363 1.708 0 0.176 1.019 3.674 75.000 62.560 LGA P 364 P 364 2.416 0 0.702 0.778 3.029 64.881 66.259 LGA N 365 N 365 5.593 0 0.203 0.170 10.167 34.881 18.929 LGA L 366 L 366 1.425 0 0.074 1.444 5.674 82.262 60.833 LGA W 367 W 367 2.304 0 0.178 1.126 5.562 63.571 42.721 LGA K 368 K 368 2.055 0 0.026 0.077 5.465 55.714 56.296 LGA K 369 K 369 4.218 0 0.215 1.169 15.216 56.429 28.254 LGA G 370 G 370 3.034 0 0.259 0.259 3.045 57.381 57.381 LGA T 371 T 371 2.615 0 0.681 0.624 5.108 62.857 49.456 LGA N 372 N 372 2.665 0 0.650 1.435 6.765 59.286 47.976 LGA G 373 G 373 3.680 0 0.686 0.686 5.757 38.929 38.929 LGA Y 374 Y 374 7.781 0 0.031 1.323 11.448 6.071 20.635 LGA P 375 P 375 15.215 0 0.067 0.361 16.903 0.000 0.000 LGA I 376 I 376 19.663 0 0.181 1.136 23.191 0.000 0.000 LGA F 377 F 377 25.318 0 0.551 1.507 31.598 0.000 0.000 LGA Q 378 Q 378 24.463 0 0.112 1.456 26.410 0.000 0.000 LGA W 379 W 379 24.674 0 0.669 1.292 26.976 0.000 0.000 LGA S 380 S 380 23.649 0 0.090 0.684 26.080 0.000 0.000 LGA E 381 E 381 21.773 0 0.175 1.273 22.473 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 31 124 124 100.00 254 254 100.00 31 SUMMARY(RMSD_GDC): 11.086 11.067 11.853 23.237 19.558 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 31 31 4.0 11 2.77 30.645 28.368 0.384 LGA_LOCAL RMSD: 2.766 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.261 Number of assigned atoms: 31 Std_ASGN_ATOMS RMSD: 11.086 Standard rmsd on all 31 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.441784 * X + 0.897096 * Y + -0.006728 * Z + 10.568957 Y_new = -0.551912 * X + -0.277692 * Y + -0.786308 * Z + 43.816143 Z_new = -0.707262 * X + -0.343665 * Y + 0.617798 * Z + -9.630024 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.245818 0.785618 -0.507647 [DEG: -128.6759 45.0126 -29.0860 ] ZXZ: -0.008557 0.904856 -2.023107 [DEG: -0.4903 51.8445 -115.9155 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0537TS102_1-D2 REMARK 2: T0537-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0537TS102_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 31 31 4.0 11 2.77 28.368 11.09 REMARK ---------------------------------------------------------- MOLECULE T0537TS102_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0537 REMARK MODEL 1 REFINED REMARK PARENT 2o04_A ATOM 3113 N SER 351 5.778 2.255 60.912 1.00 7.76 N ATOM 3114 CA SER 351 6.723 1.887 59.906 1.00 7.76 C ATOM 3115 C SER 351 6.066 0.822 59.098 1.00 7.76 C ATOM 3116 O SER 351 5.189 0.114 59.590 1.00 7.76 O ATOM 3117 H SER 351 5.479 1.640 61.497 1.00 7.76 H ATOM 3118 CB SER 351 8.034 1.425 60.547 1.00 7.76 C ATOM 3119 HG SER 351 8.129 2.729 61.876 1.00 7.76 H ATOM 3120 OG SER 351 8.644 2.475 61.276 1.00 7.76 O ATOM 3121 N ALA 352 6.459 0.695 57.820 1.00 8.48 N ATOM 3122 CA ALA 352 5.838 -0.295 56.998 1.00 8.48 C ATOM 3123 C ALA 352 6.875 -1.306 56.661 1.00 8.48 C ATOM 3124 O ALA 352 8.047 -0.978 56.485 1.00 8.48 O ATOM 3125 H ALA 352 7.105 1.223 57.480 1.00 8.48 H ATOM 3126 CB ALA 352 5.240 0.348 55.756 1.00 8.48 C ATOM 3127 N GLU 353 6.448 -2.576 56.579 1.00 9.35 N ATOM 3128 CA GLU 353 7.345 -3.639 56.257 1.00 9.35 C ATOM 3129 C GLU 353 8.320 -3.795 57.372 1.00 9.35 C ATOM 3130 O GLU 353 8.632 -2.850 58.096 1.00 9.35 O ATOM 3131 H GLU 353 5.578 -2.751 56.732 1.00 9.35 H ATOM 3132 CB GLU 353 8.055 -3.359 54.930 1.00 9.35 C ATOM 3133 CD GLU 353 9.616 -4.188 53.128 1.00 9.35 C ATOM 3134 CG GLU 353 8.976 -4.476 54.472 1.00 9.35 C ATOM 3135 OE1 GLU 353 9.368 -3.096 52.573 1.00 9.35 O ATOM 3136 OE2 GLU 353 10.366 -5.052 52.628 1.00 9.35 O ATOM 3137 N GLU 354 8.816 -5.032 57.534 1.00 9.97 N ATOM 3138 CA GLU 354 9.737 -5.358 58.574 1.00 9.97 C ATOM 3139 C GLU 354 11.009 -4.613 58.342 1.00 9.97 C ATOM 3140 O GLU 354 11.631 -4.178 59.308 1.00 9.97 O ATOM 3141 H GLU 354 8.544 -5.667 56.957 1.00 9.97 H ATOM 3142 CB GLU 354 9.979 -6.868 58.621 1.00 9.97 C ATOM 3143 CD GLU 354 9.044 -9.167 59.091 1.00 9.97 C ATOM 3144 CG GLU 354 8.784 -7.673 59.102 1.00 9.97 C ATOM 3145 OE1 GLU 354 9.969 -9.604 58.373 1.00 9.97 O ATOM 3146 OE2 GLU 354 8.324 -9.901 59.801 1.00 9.97 O ATOM 3147 N LEU 355 11.369 -4.426 57.049 1.00 10.03 N ATOM 3148 CA LEU 355 12.580 -3.845 56.518 1.00 10.03 C ATOM 3149 C LEU 355 13.645 -3.671 57.554 1.00 10.03 C ATOM 3150 O LEU 355 13.580 -2.817 58.436 1.00 10.03 O ATOM 3151 H LEU 355 10.730 -4.723 56.490 1.00 10.03 H ATOM 3152 CB LEU 355 12.285 -2.489 55.872 1.00 10.03 C ATOM 3153 CG LEU 355 13.479 -1.758 55.256 1.00 10.03 C ATOM 3154 CD1 LEU 355 14.062 -2.557 54.100 1.00 10.03 C ATOM 3155 CD2 LEU 355 13.074 -0.369 54.787 1.00 10.03 C ATOM 3156 N GLY 356 14.682 -4.520 57.449 1.00 12.32 N ATOM 3157 CA GLY 356 15.757 -4.542 58.392 1.00 12.32 C ATOM 3158 C GLY 356 16.498 -3.248 58.352 1.00 12.32 C ATOM 3159 O GLY 356 16.903 -2.732 59.392 1.00 12.32 O ATOM 3160 H GLY 356 14.683 -5.091 56.752 1.00 12.32 H ATOM 3161 N ASN 357 16.700 -2.679 57.150 1.00 10.35 N ATOM 3162 CA ASN 357 17.501 -1.495 57.108 1.00 10.35 C ATOM 3163 C ASN 357 16.679 -0.330 57.534 1.00 10.35 C ATOM 3164 O ASN 357 16.054 0.343 56.716 1.00 10.35 O ATOM 3165 H ASN 357 16.353 -3.015 56.390 1.00 10.35 H ATOM 3166 CB ASN 357 18.085 -1.293 55.709 1.00 10.35 C ATOM 3167 CG ASN 357 19.093 -2.362 55.337 1.00 10.35 C ATOM 3168 OD1 ASN 357 20.003 -2.665 56.108 1.00 10.35 O ATOM 3169 HD21 ASN 357 19.504 -3.580 53.881 1.00 10.35 H ATOM 3170 HD22 ASN 357 18.253 -2.686 53.617 1.00 10.35 H ATOM 3171 ND2 ASN 357 18.934 -2.938 54.151 1.00 10.35 N ATOM 3172 N ILE 358 16.654 -0.079 58.853 1.00 9.23 N ATOM 3173 CA ILE 358 15.992 1.077 59.368 1.00 9.23 C ATOM 3174 C ILE 358 16.796 2.253 58.932 1.00 9.23 C ATOM 3175 O ILE 358 16.257 3.268 58.492 1.00 9.23 O ATOM 3176 H ILE 358 17.062 -0.653 59.414 1.00 9.23 H ATOM 3177 CB ILE 358 15.840 1.004 60.899 1.00 9.23 C ATOM 3178 CD1 ILE 358 14.873 -0.436 62.767 1.00 9.23 C ATOM 3179 CG1 ILE 358 14.878 -0.120 61.288 1.00 9.23 C ATOM 3180 CG2 ILE 358 15.394 2.349 61.453 1.00 9.23 C ATOM 3181 N ILE 359 18.132 2.126 59.026 1.00 9.26 N ATOM 3182 CA ILE 359 18.977 3.239 58.718 1.00 9.26 C ATOM 3183 C ILE 359 19.757 2.931 57.488 1.00 9.26 C ATOM 3184 O ILE 359 20.263 1.823 57.309 1.00 9.26 O ATOM 3185 H ILE 359 18.495 1.343 59.283 1.00 9.26 H ATOM 3186 CB ILE 359 19.912 3.580 59.893 1.00 9.26 C ATOM 3187 CD1 ILE 359 19.915 4.095 62.390 1.00 9.26 C ATOM 3188 CG1 ILE 359 19.097 3.987 61.123 1.00 9.26 C ATOM 3189 CG2 ILE 359 20.902 4.661 59.489 1.00 9.26 C ATOM 3190 N VAL 360 19.845 3.928 56.589 1.00 9.28 N ATOM 3191 CA VAL 360 20.627 3.807 55.398 1.00 9.28 C ATOM 3192 C VAL 360 21.698 4.820 55.551 1.00 9.28 C ATOM 3193 O VAL 360 21.511 5.787 56.286 1.00 9.28 O ATOM 3194 H VAL 360 19.393 4.687 56.756 1.00 9.28 H ATOM 3195 CB VAL 360 19.768 4.016 54.136 1.00 9.28 C ATOM 3196 CG1 VAL 360 18.670 2.965 54.059 1.00 9.28 C ATOM 3197 CG2 VAL 360 19.173 5.415 54.122 1.00 9.28 C ATOM 3198 N ALA 361 22.850 4.611 54.877 1.00 9.97 N ATOM 3199 CA ALA 361 23.943 5.525 55.042 1.00 9.97 C ATOM 3200 C ALA 361 23.440 6.886 54.710 1.00 9.97 C ATOM 3201 O ALA 361 23.132 7.198 53.561 1.00 9.97 O ATOM 3202 H ALA 361 22.935 3.903 54.327 1.00 9.97 H ATOM 3203 CB ALA 361 25.113 5.116 54.160 1.00 9.97 C ATOM 3204 N TRP 362 23.342 7.725 55.753 1.00 9.43 N ATOM 3205 CA TRP 362 22.812 9.044 55.624 1.00 9.43 C ATOM 3206 C TRP 362 22.673 9.624 56.989 1.00 9.43 C ATOM 3207 O TRP 362 22.386 8.911 57.949 1.00 9.43 O ATOM 3208 H TRP 362 23.626 7.430 56.555 1.00 9.43 H ATOM 3209 CB TRP 362 21.473 9.014 54.884 1.00 9.43 C ATOM 3210 HB2 TRP 362 20.692 8.784 55.524 1.00 9.43 H ATOM 3211 HB3 TRP 362 21.514 8.753 53.920 1.00 9.43 H ATOM 3212 CG TRP 362 20.900 10.372 54.627 1.00 9.43 C ATOM 3213 CD1 TRP 362 19.752 10.891 55.154 1.00 9.43 C ATOM 3214 HE1 TRP 362 18.824 12.715 54.913 1.00 9.43 H ATOM 3215 NE1 TRP 362 19.548 12.167 54.686 1.00 9.43 N ATOM 3216 CD2 TRP 362 21.446 11.389 53.778 1.00 9.43 C ATOM 3217 CE2 TRP 362 20.579 12.494 53.838 1.00 9.43 C ATOM 3218 CH2 TRP 362 21.935 13.721 52.344 1.00 9.43 C ATOM 3219 CZ2 TRP 362 20.812 13.668 53.123 1.00 9.43 C ATOM 3220 CE3 TRP 362 22.586 11.471 52.972 1.00 9.43 C ATOM 3221 CZ3 TRP 362 22.815 12.636 52.265 1.00 9.43 C ATOM 3222 N ASN 363 22.882 10.950 57.110 1.00 9.77 N ATOM 3223 CA ASN 363 22.720 11.581 58.384 1.00 9.77 C ATOM 3224 C ASN 363 21.688 12.642 58.212 1.00 9.77 C ATOM 3225 O ASN 363 21.754 13.474 57.307 1.00 9.77 O ATOM 3226 H ASN 363 23.122 11.437 56.392 1.00 9.77 H ATOM 3227 CB ASN 363 24.059 12.125 58.886 1.00 9.77 C ATOM 3228 CG ASN 363 25.063 11.028 59.175 1.00 9.77 C ATOM 3229 OD1 ASN 363 24.756 10.060 59.871 1.00 9.77 O ATOM 3230 HD21 ASN 363 26.904 10.553 58.782 1.00 9.77 H ATOM 3231 HD22 ASN 363 26.455 11.899 58.140 1.00 9.77 H ATOM 3232 ND2 ASN 363 26.270 11.177 58.643 1.00 9.77 N ATOM 3233 N PRO 364 20.719 12.595 59.070 1.00 10.12 N ATOM 3234 CA PRO 364 19.650 13.550 58.995 1.00 10.12 C ATOM 3235 C PRO 364 20.055 14.866 59.550 1.00 10.12 C ATOM 3236 O PRO 364 21.039 14.938 60.281 1.00 10.12 O ATOM 3237 CB PRO 364 18.528 12.918 59.823 1.00 10.12 C ATOM 3238 CD PRO 364 20.463 11.558 60.195 1.00 10.12 C ATOM 3239 CG PRO 364 19.239 12.117 60.864 1.00 10.12 C ATOM 3240 N ASN 365 19.322 15.920 59.153 1.00 10.73 N ATOM 3241 CA ASN 365 19.500 17.249 59.645 1.00 10.73 C ATOM 3242 C ASN 365 20.931 17.637 59.517 1.00 10.73 C ATOM 3243 O ASN 365 21.397 18.538 60.213 1.00 10.73 O ATOM 3244 H ASN 365 18.689 15.749 58.538 1.00 10.73 H ATOM 3245 CB ASN 365 19.015 17.353 61.092 1.00 10.73 C ATOM 3246 CG ASN 365 17.525 17.115 61.226 1.00 10.73 C ATOM 3247 OD1 ASN 365 16.733 17.604 60.420 1.00 10.73 O ATOM 3248 HD21 ASN 365 16.262 16.188 62.373 1.00 10.73 H ATOM 3249 HD22 ASN 365 17.748 16.022 62.815 1.00 10.73 H ATOM 3250 ND2 ASN 365 17.137 16.361 62.248 1.00 10.73 N ATOM 3251 N LEU 366 21.678 16.982 58.609 1.00 10.26 N ATOM 3252 CA LEU 366 23.013 17.459 58.421 1.00 10.26 C ATOM 3253 C LEU 366 22.808 18.819 57.871 1.00 10.26 C ATOM 3254 O LEU 366 23.447 19.790 58.277 1.00 10.26 O ATOM 3255 H LEU 366 21.380 16.281 58.131 1.00 10.26 H ATOM 3256 CB LEU 366 23.794 16.518 57.501 1.00 10.26 C ATOM 3257 CG LEU 366 24.129 15.138 58.068 1.00 10.26 C ATOM 3258 CD1 LEU 366 24.740 14.251 56.995 1.00 10.26 C ATOM 3259 CD2 LEU 366 25.073 15.260 59.254 1.00 10.26 C ATOM 3260 N TRP 367 21.856 18.899 56.926 1.00 9.75 N ATOM 3261 CA TRP 367 21.467 20.140 56.343 1.00 9.75 C ATOM 3262 C TRP 367 20.087 20.307 56.877 1.00 9.75 C ATOM 3263 O TRP 367 19.157 19.635 56.430 1.00 9.75 O ATOM 3264 H TRP 367 21.461 18.134 56.664 1.00 9.75 H ATOM 3265 CB TRP 367 21.565 20.069 54.818 1.00 9.75 C ATOM 3266 HB2 TRP 367 21.521 21.011 54.390 1.00 9.75 H ATOM 3267 HB3 TRP 367 21.204 19.235 54.397 1.00 9.75 H ATOM 3268 CG TRP 367 22.961 19.875 54.314 1.00 9.75 C ATOM 3269 CD1 TRP 367 23.866 20.853 54.013 1.00 9.75 C ATOM 3270 HE1 TRP 367 25.804 20.772 53.318 1.00 9.75 H ATOM 3271 NE1 TRP 367 25.043 20.293 53.579 1.00 9.75 N ATOM 3272 CD2 TRP 367 23.614 18.628 54.053 1.00 9.75 C ATOM 3273 CE2 TRP 367 24.911 18.925 53.596 1.00 9.75 C ATOM 3274 CH2 TRP 367 25.423 16.633 53.361 1.00 9.75 C ATOM 3275 CZ2 TRP 367 25.826 17.933 53.246 1.00 9.75 C ATOM 3276 CE3 TRP 367 23.230 17.289 54.160 1.00 9.75 C ATOM 3277 CZ3 TRP 367 24.140 16.308 53.813 1.00 9.75 C ATOM 3278 N LYS 368 19.911 21.206 57.858 1.00 8.86 N ATOM 3279 CA LYS 368 18.621 21.249 58.472 1.00 8.86 C ATOM 3280 C LYS 368 18.069 22.621 58.367 1.00 8.86 C ATOM 3281 O LYS 368 18.789 23.604 58.203 1.00 8.86 O ATOM 3282 H LYS 368 20.560 21.767 58.132 1.00 8.86 H ATOM 3283 CB LYS 368 18.709 20.804 59.933 1.00 8.86 C ATOM 3284 CD LYS 368 19.557 21.240 62.254 1.00 8.86 C ATOM 3285 CE LYS 368 20.363 22.178 63.140 1.00 8.86 C ATOM 3286 CG LYS 368 19.535 21.728 60.814 1.00 8.86 C ATOM 3287 HZ1 LYS 368 20.916 22.257 65.033 1.00 8.86 H ATOM 3288 HZ2 LYS 368 20.826 20.886 64.559 1.00 8.86 H ATOM 3289 HZ3 LYS 368 19.616 21.623 64.881 1.00 8.86 H ATOM 3290 NZ LYS 368 20.438 21.686 64.544 1.00 8.86 N ATOM 3291 N LYS 369 16.733 22.693 58.451 1.00 8.10 N ATOM 3292 CA LYS 369 16.029 23.931 58.401 1.00 8.10 C ATOM 3293 C LYS 369 15.129 23.888 59.586 1.00 8.10 C ATOM 3294 O LYS 369 15.334 23.101 60.509 1.00 8.10 O ATOM 3295 H LYS 369 16.278 21.920 58.542 1.00 8.10 H ATOM 3296 CB LYS 369 15.286 24.072 57.071 1.00 8.10 C ATOM 3297 CD LYS 369 15.438 26.562 56.798 1.00 8.10 C ATOM 3298 CE LYS 369 14.659 27.848 56.572 1.00 8.10 C ATOM 3299 CG LYS 369 14.506 25.368 56.931 1.00 8.10 C ATOM 3300 HZ1 LYS 369 15.066 29.768 56.374 1.00 8.10 H ATOM 3301 HZ2 LYS 369 16.129 28.937 55.834 1.00 8.10 H ATOM 3302 HZ3 LYS 369 16.003 29.112 57.271 1.00 8.10 H ATOM 3303 NZ LYS 369 15.554 29.036 56.506 1.00 8.10 N ATOM 3304 N GLY 370 14.108 24.756 59.591 1.00 8.01 N ATOM 3305 CA GLY 370 13.139 24.721 60.639 1.00 8.01 C ATOM 3306 C GLY 370 12.124 23.750 60.140 1.00 8.01 C ATOM 3307 O GLY 370 12.485 22.667 59.685 1.00 8.01 O ATOM 3308 H GLY 370 14.035 25.363 58.930 1.00 8.01 H ATOM 3309 N THR 371 10.829 24.083 60.248 1.00 8.16 N ATOM 3310 CA THR 371 9.830 23.211 59.700 1.00 8.16 C ATOM 3311 C THR 371 9.634 23.646 58.281 1.00 8.16 C ATOM 3312 O THR 371 9.872 24.807 57.951 1.00 8.16 O ATOM 3313 H THR 371 10.582 24.846 60.659 1.00 8.16 H ATOM 3314 CB THR 371 8.523 23.269 60.511 1.00 8.16 C ATOM 3315 HG1 THR 371 7.840 24.814 59.687 1.00 8.16 H ATOM 3316 OG1 THR 371 7.992 24.600 60.472 1.00 8.16 O ATOM 3317 CG2 THR 371 8.777 22.888 61.961 1.00 8.16 C ATOM 3318 N ASN 372 9.200 22.733 57.387 1.00 9.00 N ATOM 3319 CA ASN 372 9.078 23.154 56.021 1.00 9.00 C ATOM 3320 C ASN 372 7.677 23.038 55.518 1.00 9.00 C ATOM 3321 O ASN 372 6.830 22.341 56.075 1.00 9.00 O ATOM 3322 H ASN 372 8.990 21.889 57.619 1.00 9.00 H ATOM 3323 CB ASN 372 10.025 22.352 55.127 1.00 9.00 C ATOM 3324 CG ASN 372 11.485 22.612 55.442 1.00 9.00 C ATOM 3325 OD1 ASN 372 12.046 23.629 55.034 1.00 9.00 O ATOM 3326 HD21 ASN 372 12.972 21.797 56.386 1.00 9.00 H ATOM 3327 HD22 ASN 372 11.656 20.962 56.449 1.00 9.00 H ATOM 3328 ND2 ASN 372 12.105 21.692 56.171 1.00 9.00 N ATOM 3329 N GLY 373 7.447 23.776 54.412 1.00 8.65 N ATOM 3330 CA GLY 373 6.230 23.919 53.667 1.00 8.65 C ATOM 3331 C GLY 373 6.595 24.956 52.647 1.00 8.65 C ATOM 3332 O GLY 373 7.783 25.153 52.402 1.00 8.65 O ATOM 3333 H GLY 373 8.188 24.217 54.153 1.00 8.65 H ATOM 3334 N TYR 374 5.613 25.608 51.982 1.00 8.78 N ATOM 3335 CA TYR 374 5.964 26.691 51.097 1.00 8.78 C ATOM 3336 C TYR 374 4.698 27.311 50.561 1.00 8.78 C ATOM 3337 O TYR 374 3.934 26.679 49.835 1.00 8.78 O ATOM 3338 H TYR 374 4.750 25.373 52.086 1.00 8.78 H ATOM 3339 CB TYR 374 6.860 26.188 49.964 1.00 8.78 C ATOM 3340 CG TYR 374 6.197 25.168 49.066 1.00 8.78 C ATOM 3341 HH TYR 374 4.015 22.768 45.943 1.00 8.78 H ATOM 3342 OH TYR 374 4.368 22.377 46.584 1.00 8.78 O ATOM 3343 CZ TYR 374 4.974 23.299 47.406 1.00 8.78 C ATOM 3344 CD1 TYR 374 5.528 25.563 47.914 1.00 8.78 C ATOM 3345 CE1 TYR 374 4.920 24.640 47.086 1.00 8.78 C ATOM 3346 CD2 TYR 374 6.242 23.814 49.371 1.00 8.78 C ATOM 3347 CE2 TYR 374 5.638 22.876 48.556 1.00 8.78 C ATOM 3348 N PRO 375 4.452 28.546 50.920 1.00 7.97 N ATOM 3349 CA PRO 375 3.230 29.204 50.512 1.00 7.97 C ATOM 3350 C PRO 375 3.309 29.977 49.231 1.00 7.97 C ATOM 3351 O PRO 375 4.409 30.251 48.755 1.00 7.97 O ATOM 3352 CB PRO 375 2.920 30.157 51.668 1.00 7.97 C ATOM 3353 CD PRO 375 5.146 29.373 52.066 1.00 7.97 C ATOM 3354 CG PRO 375 4.258 30.581 52.171 1.00 7.97 C ATOM 3355 N ILE 376 2.131 30.338 48.671 1.00 8.35 N ATOM 3356 CA ILE 376 2.002 31.187 47.520 1.00 8.35 C ATOM 3357 C ILE 376 1.263 32.389 48.013 1.00 8.35 C ATOM 3358 O ILE 376 0.295 32.257 48.759 1.00 8.35 O ATOM 3359 H ILE 376 1.396 30.008 49.071 1.00 8.35 H ATOM 3360 CB ILE 376 1.284 30.465 46.364 1.00 8.35 C ATOM 3361 CD1 ILE 376 0.840 30.629 43.859 1.00 8.35 C ATOM 3362 CG1 ILE 376 1.234 31.360 45.125 1.00 8.35 C ATOM 3363 CG2 ILE 376 -0.103 30.015 46.795 1.00 8.35 C ATOM 3364 N PHE 377 1.749 33.594 47.654 1.00 8.96 N ATOM 3365 CA PHE 377 1.167 34.844 48.059 1.00 8.96 C ATOM 3366 C PHE 377 1.059 34.874 49.544 1.00 8.96 C ATOM 3367 O PHE 377 0.162 35.501 50.106 1.00 8.96 O ATOM 3368 H PHE 377 2.481 33.587 47.129 1.00 8.96 H ATOM 3369 CB PHE 377 -0.201 35.036 47.401 1.00 8.96 C ATOM 3370 CG PHE 377 -0.680 36.459 47.404 1.00 8.96 C ATOM 3371 CZ PHE 377 -1.573 39.092 47.412 1.00 8.96 C ATOM 3372 CD1 PHE 377 0.077 37.462 46.823 1.00 8.96 C ATOM 3373 CE1 PHE 377 -0.363 38.771 46.826 1.00 8.96 C ATOM 3374 CD2 PHE 377 -1.890 36.796 47.987 1.00 8.96 C ATOM 3375 CE2 PHE 377 -2.331 38.107 47.989 1.00 8.96 C ATOM 3376 N GLN 378 1.993 34.187 50.228 1.00 9.26 N ATOM 3377 CA GLN 378 1.984 34.218 51.657 1.00 9.26 C ATOM 3378 C GLN 378 2.310 35.615 52.054 1.00 9.26 C ATOM 3379 O GLN 378 1.655 36.203 52.914 1.00 9.26 O ATOM 3380 H GLN 378 2.620 33.711 49.791 1.00 9.26 H ATOM 3381 CB GLN 378 2.980 33.202 52.221 1.00 9.26 C ATOM 3382 CD GLN 378 1.649 32.557 54.268 1.00 9.26 C ATOM 3383 CG GLN 378 2.964 33.092 53.736 1.00 9.26 C ATOM 3384 OE1 GLN 378 1.201 31.480 53.873 1.00 9.26 O ATOM 3385 HE21 GLN 378 0.242 33.036 55.516 1.00 9.26 H ATOM 3386 HE22 GLN 378 1.387 34.088 55.431 1.00 9.26 H ATOM 3387 NE2 GLN 378 1.025 33.308 55.168 1.00 9.26 N ATOM 3388 N TRP 379 3.338 36.193 51.401 1.00 9.55 N ATOM 3389 CA TRP 379 3.729 37.533 51.711 1.00 9.55 C ATOM 3390 C TRP 379 3.878 38.241 50.406 1.00 9.55 C ATOM 3391 O TRP 379 4.351 37.663 49.430 1.00 9.55 O ATOM 3392 H TRP 379 3.778 35.730 50.767 1.00 9.55 H ATOM 3393 CB TRP 379 5.022 37.537 52.533 1.00 9.55 C ATOM 3394 HB2 TRP 379 5.191 38.461 52.967 1.00 9.55 H ATOM 3395 HB3 TRP 379 5.738 36.914 52.219 1.00 9.55 H ATOM 3396 CG TRP 379 4.876 36.901 53.881 1.00 9.55 C ATOM 3397 CD1 TRP 379 5.033 35.579 54.185 1.00 9.55 C ATOM 3398 HE1 TRP 379 4.874 34.542 55.958 1.00 9.55 H ATOM 3399 NE1 TRP 379 4.820 35.372 55.526 1.00 9.55 N ATOM 3400 CD2 TRP 379 4.544 37.559 55.110 1.00 9.55 C ATOM 3401 CE2 TRP 379 4.519 36.576 56.115 1.00 9.55 C ATOM 3402 CH2 TRP 379 3.960 38.176 57.757 1.00 9.55 C ATOM 3403 CZ2 TRP 379 4.227 36.874 57.446 1.00 9.55 C ATOM 3404 CE3 TRP 379 4.269 38.885 55.458 1.00 9.55 C ATOM 3405 CZ3 TRP 379 3.980 39.176 56.778 1.00 9.55 C ATOM 3406 N SER 380 3.464 39.518 50.345 1.00 10.18 N ATOM 3407 CA SER 380 3.596 40.240 49.117 1.00 10.18 C ATOM 3408 C SER 380 4.103 41.597 49.471 1.00 10.18 C ATOM 3409 O SER 380 3.960 42.045 50.606 1.00 10.18 O ATOM 3410 H SER 380 3.107 39.918 51.067 1.00 10.18 H ATOM 3411 CB SER 380 2.256 40.291 48.379 1.00 10.18 C ATOM 3412 HG SER 380 1.569 41.805 49.225 1.00 10.18 H ATOM 3413 OG SER 380 1.297 41.029 49.116 1.00 10.18 O ATOM 3414 N GLU 381 4.747 42.277 48.507 1.00 10.55 N ATOM 3415 CA GLU 381 5.216 43.603 48.769 1.00 10.55 C ATOM 3416 C GLU 381 4.709 44.471 47.626 1.00 10.55 C ATOM 3417 O GLU 381 4.032 43.918 46.720 1.00 10.55 O ATOM 3418 H GLU 381 4.884 41.902 47.699 1.00 10.55 H ATOM 3419 OXT GLU 381 4.992 45.699 47.647 1.00 10.55 O ATOM 3420 CB GLU 381 6.741 43.619 48.886 1.00 10.55 C ATOM 3421 CD GLU 381 6.914 43.386 51.396 1.00 10.55 C ATOM 3422 CG GLU 381 7.283 42.801 50.047 1.00 10.55 C ATOM 3423 OE1 GLU 381 6.845 44.628 51.506 1.00 10.55 O ATOM 3424 OE2 GLU 381 6.692 42.603 52.343 1.00 10.55 O TER END ########################## # # # ACE results: # # # ########################## WARNING!!! Different chains are predicted. Only first chain will be considered. Number of atoms possible to evaluate: 0 ERROR! The set of atoms possible to evaluate is empty-> END of the results output