####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 74 ( 296), selected 74 , name T0537AL396_1-D1 # Molecule2: number of CA atoms 286 ( 2058), selected 74 , name T0537-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0537AL396_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 103 - 126 4.76 25.26 LONGEST_CONTINUOUS_SEGMENT: 24 104 - 127 4.97 25.03 LCS_AVERAGE: 6.70 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 110 - 123 1.94 24.95 LCS_AVERAGE: 2.89 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 72 - 80 0.88 27.78 LONGEST_CONTINUOUS_SEGMENT: 9 115 - 123 0.85 24.11 LCS_AVERAGE: 1.75 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 74 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT K 66 K 66 3 3 14 0 3 3 3 4 4 5 8 9 11 13 14 16 16 18 18 19 22 22 23 LCS_GDT P 67 P 67 3 4 14 3 3 3 3 4 4 4 7 9 9 10 12 14 14 18 18 19 22 22 25 LCS_GDT Y 68 Y 68 3 4 16 3 3 3 3 4 5 7 9 10 14 14 15 16 19 20 20 21 23 24 25 LCS_GDT M 69 M 69 3 4 19 3 3 3 3 4 6 8 10 10 14 14 15 16 19 21 23 24 25 26 27 LCS_GDT I 70 I 70 3 4 20 3 3 3 6 6 6 8 10 10 14 14 17 21 21 22 24 24 25 26 27 LCS_GDT M 71 M 71 3 13 20 3 3 3 6 9 13 13 13 14 17 17 20 21 21 22 24 24 25 26 27 LCS_GDT N 72 N 72 9 13 20 8 8 10 12 12 13 13 14 15 17 17 20 21 21 22 24 24 25 26 27 LCS_GDT A 73 A 73 9 13 20 8 8 10 12 12 13 13 14 15 17 17 20 21 21 22 24 24 25 26 27 LCS_GDT T 74 T 74 9 13 20 8 8 10 12 12 13 13 14 15 17 17 20 21 21 22 24 24 25 26 27 LCS_GDT Q 75 Q 75 9 13 20 8 8 10 12 12 13 13 14 15 17 17 20 21 21 22 24 24 25 26 27 LCS_GDT I 76 I 76 9 13 20 8 8 10 12 12 13 13 14 15 17 17 20 21 21 22 24 24 25 26 27 LCS_GDT R 77 R 77 9 13 20 8 8 10 12 12 13 13 14 15 17 17 20 21 21 22 24 24 25 26 29 LCS_GDT N 78 N 78 9 13 20 8 8 10 12 12 13 13 14 15 17 17 20 21 21 22 24 24 25 26 29 LCS_GDT M 79 M 79 9 13 20 8 8 10 12 12 13 13 14 15 17 17 20 21 21 22 24 24 25 29 31 LCS_GDT R 80 R 80 9 13 20 5 6 10 12 12 13 13 14 15 17 17 20 21 24 24 25 26 27 29 31 LCS_GDT S 81 S 81 7 13 20 5 6 10 12 12 13 13 14 15 17 17 20 21 24 24 25 26 27 29 31 LCS_GDT V 82 V 82 7 13 20 5 6 10 12 12 13 13 14 15 17 17 20 21 24 24 25 26 27 29 31 LCS_GDT L 83 L 83 7 13 20 5 6 10 12 12 13 13 14 15 17 17 20 21 24 24 25 26 27 29 31 LCS_GDT K 84 K 84 4 13 20 4 4 4 5 6 8 11 14 15 17 17 20 21 21 22 24 26 27 29 31 LCS_GDT S 85 S 85 4 5 20 4 4 4 5 5 6 9 14 15 17 17 20 21 21 22 25 26 27 29 31 LCS_GDT G 86 G 86 4 5 20 4 4 4 5 5 5 7 10 15 17 17 20 21 21 22 24 26 27 29 29 LCS_GDT M 87 M 87 4 5 20 4 4 4 5 6 11 12 14 15 17 17 20 21 21 22 24 24 25 26 28 LCS_GDT K 88 K 88 3 5 20 1 4 4 5 5 7 8 10 11 15 17 19 19 21 21 22 26 27 29 31 LCS_GDT V 89 V 89 3 3 20 0 4 4 4 4 6 6 8 11 12 15 18 20 24 24 25 26 27 29 31 LCS_GDT Y 90 Y 90 3 3 19 1 3 3 3 5 6 7 8 11 12 15 18 20 24 24 25 26 27 29 31 LCS_GDT F 91 F 91 3 3 13 0 3 3 3 5 6 7 8 11 12 15 18 20 24 24 25 26 28 31 32 LCS_GDT Q 92 Q 92 3 3 13 0 3 3 3 6 8 8 8 11 12 15 18 20 24 24 26 29 30 31 32 LCS_GDT L 93 L 93 3 4 13 3 3 3 5 5 5 5 7 10 12 14 18 21 25 29 29 29 31 32 32 LCS_GDT G 94 G 94 3 4 13 3 3 3 5 8 14 16 19 20 23 23 24 27 28 30 30 30 31 32 32 LCS_GDT A 95 A 95 3 4 13 3 3 4 5 6 11 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT D 96 D 96 3 4 13 3 3 3 5 6 7 15 19 20 23 23 24 27 28 30 30 30 31 32 32 LCS_GDT I 97 I 97 3 4 16 3 3 3 4 6 7 7 19 19 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT D 98 D 98 3 6 17 3 4 4 4 5 6 7 9 12 13 15 20 26 28 30 30 30 31 32 32 LCS_GDT M 99 M 99 4 6 17 3 4 4 4 5 6 8 9 12 14 21 25 27 28 30 30 30 31 32 32 LCS_GDT A 100 A 100 4 6 17 3 4 4 4 5 6 7 9 10 12 15 16 21 28 30 30 30 31 32 32 LCS_GDT G 101 G 101 4 6 17 3 4 4 4 5 6 6 9 9 11 15 15 17 17 19 21 22 25 29 32 LCS_GDT I 102 I 102 4 6 17 3 4 4 4 5 6 8 10 10 11 15 16 17 17 19 21 24 30 32 32 LCS_GDT D 103 D 103 4 6 24 3 4 4 4 5 6 7 10 10 12 15 16 17 19 23 24 29 31 32 32 LCS_GDT D 104 D 104 4 5 24 3 4 4 4 4 6 8 10 12 14 16 25 27 28 30 30 30 31 32 32 LCS_GDT W 105 W 105 4 5 24 3 4 4 4 4 6 8 10 12 13 16 24 27 28 30 30 30 31 32 32 LCS_GDT Q 106 Q 106 3 5 24 0 3 3 3 4 5 8 10 12 18 23 25 27 28 30 30 30 31 32 32 LCS_GDT S 107 S 107 3 8 24 3 5 8 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT L 108 L 108 3 8 24 3 3 4 4 8 10 12 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT N 109 N 109 5 13 24 3 3 5 8 11 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT G 110 G 110 5 14 24 3 4 5 9 11 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT S 111 S 111 5 14 24 3 4 5 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT G 112 G 112 5 14 24 5 9 9 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT D 113 D 113 5 14 24 3 4 8 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT F 114 F 114 3 14 24 3 3 7 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT P 115 P 115 9 14 24 3 4 6 10 10 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT Y 116 Y 116 9 14 24 5 9 9 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT E 117 E 117 9 14 24 5 9 9 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT I 118 I 118 9 14 24 3 9 9 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT D 119 D 119 9 14 24 5 9 9 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT F 120 F 120 9 14 24 5 9 9 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT D 121 D 121 9 14 24 5 9 9 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT G 122 G 122 9 14 24 5 9 9 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT D 123 D 123 9 14 24 5 9 9 11 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT S 124 S 124 3 11 24 3 3 4 5 6 8 9 15 19 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT H 125 H 125 3 11 24 3 4 8 9 11 12 15 16 20 23 23 25 27 28 30 30 30 31 32 32 LCS_GDT V 126 V 126 3 4 24 3 3 5 5 7 8 11 13 17 18 20 25 27 28 30 30 30 31 32 32 LCS_GDT I 127 I 127 4 4 24 3 3 5 5 7 8 8 8 11 12 15 18 20 24 24 25 27 28 30 32 LCS_GDT K 128 K 128 4 4 20 3 3 4 5 7 7 8 8 10 11 14 18 20 24 24 25 27 28 29 31 LCS_GDT N 129 N 129 4 4 18 3 3 4 4 6 7 7 8 10 11 13 14 16 18 21 22 25 27 28 30 LCS_GDT F 130 F 130 4 4 12 3 3 4 4 5 7 7 8 10 12 14 18 20 24 24 25 26 27 29 31 LCS_GDT K 131 K 131 3 4 12 0 3 3 3 5 5 6 7 10 12 14 18 20 24 24 25 26 27 29 31 LCS_GDT C 132 C 132 3 5 12 3 3 3 4 5 6 6 7 9 11 13 15 18 24 24 25 26 27 29 31 LCS_GDT S 133 S 133 3 5 12 3 3 3 4 4 6 7 9 10 14 14 15 16 19 21 22 24 26 28 29 LCS_GDT A 134 A 134 3 5 12 3 3 3 4 5 9 11 11 13 15 15 16 20 24 24 25 26 27 29 31 LCS_GDT G 135 G 135 4 5 12 1 4 4 4 9 11 12 13 13 15 15 17 20 24 24 25 26 27 29 31 LCS_GDT D 136 D 136 4 5 12 3 4 4 4 4 5 6 7 8 12 14 16 20 24 24 25 26 27 29 31 LCS_GDT Y 137 Y 137 4 4 12 3 4 4 4 4 6 6 8 11 12 15 20 21 24 24 25 26 27 29 31 LCS_GDT P 138 P 138 4 4 12 3 4 4 6 6 8 9 11 12 16 17 20 21 24 24 25 26 27 29 31 LCS_GDT S 139 S 139 3 3 12 3 3 3 6 6 6 7 9 10 14 17 20 21 21 22 24 25 27 29 31 LCS_AVERAGE LCS_A: 3.78 ( 1.75 2.89 6.70 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 9 10 12 13 14 16 19 20 23 23 25 27 28 30 30 30 31 32 32 GDT PERCENT_AT 2.80 3.15 3.50 4.20 4.55 4.90 5.59 6.64 6.99 8.04 8.04 8.74 9.44 9.79 10.49 10.49 10.49 10.84 11.19 11.19 GDT RMS_LOCAL 0.32 0.59 1.07 1.19 1.58 1.74 2.11 2.61 2.74 3.40 3.40 4.31 4.42 4.60 4.98 4.98 4.98 5.27 5.50 5.50 GDT RMS_ALL_AT 27.16 24.39 28.91 28.33 24.96 24.87 25.27 25.76 25.92 25.82 25.82 25.44 25.84 25.68 25.92 25.92 25.92 25.91 25.80 25.80 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA K 66 K 66 44.713 5 0.555 0.555 46.550 0.000 0.000 LGA P 67 P 67 44.336 3 0.536 0.536 44.747 0.000 0.000 LGA Y 68 Y 68 42.091 8 0.518 0.518 43.501 0.000 0.000 LGA M 69 M 69 38.527 4 0.379 0.379 39.765 0.000 0.000 LGA I 70 I 70 38.394 4 0.657 0.657 38.743 0.000 0.000 LGA M 71 M 71 34.569 4 0.184 0.184 36.358 0.000 0.000 LGA N 72 N 72 34.487 4 0.613 0.613 34.996 0.000 0.000 LGA A 73 A 73 36.712 1 0.195 0.195 36.712 0.000 0.000 LGA T 74 T 74 35.542 3 0.031 0.031 35.787 0.000 0.000 LGA Q 75 Q 75 33.304 5 0.030 0.030 33.976 0.000 0.000 LGA I 76 I 76 33.747 4 0.050 0.050 34.125 0.000 0.000 LGA R 77 R 77 35.431 7 0.094 0.094 35.431 0.000 0.000 LGA N 78 N 78 33.623 4 0.152 0.152 34.053 0.000 0.000 LGA M 79 M 79 32.682 4 0.063 0.063 33.134 0.000 0.000 LGA R 80 R 80 34.913 7 0.076 0.076 34.913 0.000 0.000 LGA S 81 S 81 34.548 2 0.120 0.120 34.548 0.000 0.000 LGA V 82 V 82 31.770 3 0.353 0.353 32.713 0.000 0.000 LGA L 83 L 83 31.652 4 0.594 0.594 32.168 0.000 0.000 LGA K 84 K 84 34.538 5 0.549 0.549 35.150 0.000 0.000 LGA S 85 S 85 37.936 2 0.076 0.076 37.936 0.000 0.000 LGA G 86 G 86 36.336 0 0.211 0.211 36.818 0.000 0.000 LGA M 87 M 87 30.928 4 0.672 0.672 32.922 0.000 0.000 LGA K 88 K 88 28.898 5 0.582 0.582 30.184 0.000 0.000 LGA V 89 V 89 24.758 3 0.648 0.648 26.534 0.000 0.000 LGA Y 90 Y 90 18.873 8 0.635 0.635 21.010 0.000 0.000 LGA F 91 F 91 13.507 7 0.605 0.605 15.780 0.000 0.000 LGA Q 92 Q 92 11.249 5 0.582 0.582 12.060 1.548 0.688 LGA L 93 L 93 8.058 4 0.621 0.621 9.467 6.667 3.333 LGA G 94 G 94 4.250 0 0.273 0.273 6.072 30.714 30.714 LGA A 95 A 95 3.412 1 0.610 0.610 3.688 52.024 41.619 LGA D 96 D 96 4.916 4 0.648 0.648 6.211 27.976 13.988 LGA I 97 I 97 6.446 4 0.613 0.613 9.311 11.190 5.595 LGA D 98 D 98 11.533 4 0.600 0.600 12.076 0.357 0.179 LGA M 99 M 99 9.661 4 0.340 0.340 10.972 0.238 0.119 LGA A 100 A 100 11.352 1 0.615 0.615 12.692 0.000 0.000 LGA G 101 G 101 15.817 0 0.206 0.206 16.398 0.000 0.000 LGA I 102 I 102 14.830 4 0.607 0.607 14.883 0.000 0.000 LGA D 103 D 103 13.135 4 0.164 0.164 13.638 0.000 0.000 LGA D 104 D 104 9.242 4 0.310 0.310 10.412 2.857 1.429 LGA W 105 W 105 9.433 10 0.596 0.596 10.363 0.833 0.238 LGA Q 106 Q 106 8.181 5 0.626 0.626 8.435 12.024 5.344 LGA S 107 S 107 1.143 2 0.666 0.666 3.542 65.595 43.730 LGA L 108 L 108 3.943 4 0.168 0.168 4.663 43.810 21.905 LGA N 109 N 109 3.012 4 0.279 0.279 3.246 53.571 26.786 LGA G 110 G 110 2.795 0 0.046 0.046 2.887 59.048 59.048 LGA S 111 S 111 1.965 2 0.621 0.621 4.114 59.881 39.921 LGA G 112 G 112 2.188 0 0.193 0.193 2.188 66.786 66.786 LGA D 113 D 113 2.375 4 0.307 0.307 2.375 68.810 34.405 LGA F 114 F 114 2.092 7 0.580 0.580 3.941 61.429 22.338 LGA P 115 P 115 3.670 3 0.687 0.687 3.670 55.833 31.905 LGA Y 116 Y 116 1.788 8 0.085 0.085 2.182 68.810 22.937 LGA E 117 E 117 1.528 5 0.044 0.044 2.313 70.833 31.481 LGA I 118 I 118 1.639 4 0.162 0.162 1.639 81.548 40.774 LGA D 119 D 119 1.830 4 0.024 0.024 2.304 70.833 35.417 LGA F 120 F 120 1.723 7 0.127 0.127 1.723 72.857 26.494 LGA D 121 D 121 1.913 4 0.088 0.088 2.639 66.905 33.452 LGA G 122 G 122 2.779 0 0.156 0.156 3.238 57.262 57.262 LGA D 123 D 123 2.870 4 0.413 0.413 4.466 47.143 23.571 LGA S 124 S 124 8.435 2 0.314 0.314 9.753 6.310 4.206 LGA H 125 H 125 7.500 6 0.605 0.605 9.788 5.119 2.048 LGA V 126 V 126 10.675 3 0.611 0.611 13.057 0.357 0.204 LGA I 127 I 127 17.397 4 0.571 0.571 20.134 0.000 0.000 LGA K 128 K 128 20.162 5 0.646 0.646 21.336 0.000 0.000 LGA N 129 N 129 21.534 4 0.348 0.348 24.062 0.000 0.000 LGA F 130 F 130 24.993 7 0.588 0.588 28.740 0.000 0.000 LGA K 131 K 131 31.467 5 0.584 0.584 33.021 0.000 0.000 LGA C 132 C 132 33.213 2 0.614 0.614 35.980 0.000 0.000 LGA S 133 S 133 37.059 2 0.321 0.321 41.342 0.000 0.000 LGA A 134 A 134 42.182 1 0.558 0.558 42.761 0.000 0.000 LGA G 135 G 135 44.096 0 0.528 0.528 45.845 0.000 0.000 LGA D 136 D 136 43.982 4 0.611 0.611 43.982 0.000 0.000 LGA Y 137 Y 137 43.587 8 0.496 0.496 43.834 0.000 0.000 LGA P 138 P 138 44.072 3 0.423 0.423 44.884 0.000 0.000 LGA S 139 S 139 42.149 2 0.195 0.195 43.208 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 74 296 296 100.00 578 296 51.21 286 SUMMARY(RMSD_GDC): 18.822 18.806 18.806 4.298 2.545 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 74 286 4.0 19 2.61 6.119 5.352 0.700 LGA_LOCAL RMSD: 2.613 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 25.764 Number of assigned atoms: 74 Std_ASGN_ATOMS RMSD: 18.822 Standard rmsd on all 74 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.460788 * X + 0.874315 * Y + 0.152473 * Z + 21.743212 Y_new = 0.880937 * X + -0.471445 * Y + 0.041096 * Z + 35.544205 Z_new = 0.107814 * X + 0.115383 * Y + -0.987453 * Z + 92.245445 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.088867 -0.108024 3.025271 [DEG: 62.3875 -6.1893 173.3353 ] ZXZ: 1.834068 2.983014 0.751497 [DEG: 105.0844 170.9141 43.0576 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0537AL396_1-D1 REMARK 2: T0537-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0537AL396_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 74 286 4.0 19 2.61 5.352 18.82 REMARK ---------------------------------------------------------- MOLECULE T0537AL396_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 1fzc_A ATOM 1 N LYS 66 43.801 52.306 93.183 1.00 0.00 N ATOM 2 CA LYS 66 42.732 51.671 92.356 1.00 0.00 C ATOM 3 C LYS 66 42.882 52.018 90.883 1.00 0.00 C ATOM 4 O LYS 66 42.838 51.058 90.089 1.00 0.00 O ATOM 5 N PRO 67 43.127 53.271 90.512 1.00 0.00 N ATOM 6 CA PRO 67 43.309 53.561 89.078 1.00 0.00 C ATOM 7 C PRO 67 44.269 52.532 88.476 1.00 0.00 C ATOM 8 O PRO 67 43.918 51.789 87.562 1.00 0.00 O ATOM 9 N TYR 68 45.465 52.429 89.036 1.00 0.00 N ATOM 10 CA TYR 68 46.490 51.487 88.625 1.00 0.00 C ATOM 11 C TYR 68 46.092 50.035 88.878 1.00 0.00 C ATOM 12 O TYR 68 46.925 49.121 88.864 1.00 0.00 O ATOM 13 N MET 69 44.804 49.805 89.116 1.00 0.00 N ATOM 14 CA MET 69 44.295 48.442 89.288 1.00 0.00 C ATOM 15 C MET 69 42.910 48.322 88.648 1.00 0.00 C ATOM 16 O MET 69 42.737 48.583 87.457 1.00 0.00 O ATOM 17 N ILE 70 41.894 47.949 89.418 1.00 0.00 N ATOM 18 CA ILE 70 40.562 47.791 88.860 1.00 0.00 C ATOM 19 C ILE 70 40.266 48.803 87.757 1.00 0.00 C ATOM 20 O ILE 70 39.405 48.462 86.933 1.00 0.00 O ATOM 21 N MET 71 40.927 49.953 87.728 1.00 0.00 N ATOM 22 CA MET 71 40.610 50.885 86.638 1.00 0.00 C ATOM 23 C MET 71 41.384 50.450 85.396 1.00 0.00 C ATOM 24 O MET 71 40.848 50.438 84.282 1.00 0.00 O ATOM 25 N ASN 72 42.650 50.113 85.641 1.00 0.00 N ATOM 26 CA ASN 72 43.487 49.683 84.520 1.00 0.00 C ATOM 27 C ASN 72 42.946 48.390 83.929 1.00 0.00 C ATOM 28 O ASN 72 43.025 48.207 82.712 1.00 0.00 O ATOM 29 N ALA 73 42.348 47.546 84.767 1.00 0.00 N ATOM 30 CA ALA 73 41.784 46.307 84.242 1.00 0.00 C ATOM 31 C ALA 73 40.685 46.681 83.236 1.00 0.00 C ATOM 32 O ALA 73 40.705 46.382 82.043 1.00 0.00 O ATOM 33 N THR 74 39.718 47.421 83.764 1.00 0.00 N ATOM 34 CA THR 74 38.576 47.869 82.980 1.00 0.00 C ATOM 35 C THR 74 39.030 48.543 81.697 1.00 0.00 C ATOM 36 O THR 74 38.430 48.273 80.643 1.00 0.00 O ATOM 37 N GLN 75 40.075 49.357 81.741 1.00 0.00 N ATOM 38 CA GLN 75 40.624 49.993 80.557 1.00 0.00 C ATOM 39 C GLN 75 41.035 48.951 79.508 1.00 0.00 C ATOM 40 O GLN 75 40.920 49.250 78.310 1.00 0.00 O ATOM 41 N ILE 76 41.577 47.815 79.965 1.00 0.00 N ATOM 42 CA ILE 76 42.092 46.815 79.024 1.00 0.00 C ATOM 43 C ILE 76 40.960 45.942 78.491 1.00 0.00 C ATOM 44 O ILE 76 40.901 45.660 77.295 1.00 0.00 O ATOM 45 N ARG 77 40.009 45.585 79.351 1.00 0.00 N ATOM 46 CA ARG 77 38.833 44.830 78.946 1.00 0.00 C ATOM 47 C ARG 77 38.100 45.491 77.779 1.00 0.00 C ATOM 48 O ARG 77 37.496 44.793 76.951 1.00 0.00 O ATOM 49 N ASN 78 38.105 46.830 77.741 1.00 0.00 N ATOM 50 CA ASN 78 37.396 47.523 76.664 1.00 0.00 C ATOM 51 C ASN 78 38.192 47.331 75.367 1.00 0.00 C ATOM 52 O ASN 78 37.587 47.190 74.300 1.00 0.00 O ATOM 53 N MET 79 39.518 47.257 75.488 1.00 0.00 N ATOM 54 CA MET 79 40.325 47.065 74.285 1.00 0.00 C ATOM 55 C MET 79 40.222 45.647 73.726 1.00 0.00 C ATOM 56 O MET 79 40.332 45.478 72.517 1.00 0.00 O ATOM 57 N ARG 80 40.028 44.668 74.598 1.00 0.00 N ATOM 58 CA ARG 80 39.870 43.279 74.177 1.00 0.00 C ATOM 59 C ARG 80 38.520 43.148 73.469 1.00 0.00 C ATOM 60 O ARG 80 38.408 42.474 72.459 1.00 0.00 O ATOM 61 N SER 81 37.515 43.801 74.004 1.00 0.00 N ATOM 62 CA SER 81 36.156 43.817 73.520 1.00 0.00 C ATOM 63 C SER 81 36.066 44.450 72.138 1.00 0.00 C ATOM 64 O SER 81 35.284 43.997 71.311 1.00 0.00 O ATOM 65 N VAL 82 36.888 45.423 71.868 1.00 0.00 N ATOM 66 CA VAL 82 37.046 46.109 70.589 1.00 0.00 C ATOM 67 C VAL 82 37.653 45.073 69.637 1.00 0.00 C ATOM 68 O VAL 82 37.025 44.729 68.635 1.00 0.00 O ATOM 69 N LEU 83 38.782 44.487 70.006 1.00 0.00 N ATOM 70 CA LEU 83 39.392 43.459 69.187 1.00 0.00 C ATOM 71 C LEU 83 38.359 42.383 68.790 1.00 0.00 C ATOM 72 O LEU 83 38.304 42.030 67.631 1.00 0.00 O ATOM 73 N LYS 84 37.671 41.872 69.792 1.00 0.00 N ATOM 74 CA LYS 84 36.698 40.814 69.649 1.00 0.00 C ATOM 75 C LYS 84 35.737 41.085 68.491 1.00 0.00 C ATOM 76 O LYS 84 35.661 40.334 67.526 1.00 0.00 O ATOM 77 N SER 85 35.038 42.211 68.575 1.00 0.00 N ATOM 78 CA SER 85 34.143 42.653 67.525 1.00 0.00 C ATOM 79 C SER 85 34.903 42.762 66.197 1.00 0.00 C ATOM 80 O SER 85 34.349 42.414 65.156 1.00 0.00 O ATOM 81 N GLY 86 36.118 43.309 66.258 1.00 0.00 N ATOM 82 CA GLY 86 36.877 43.507 65.048 1.00 0.00 C ATOM 83 C GLY 86 37.148 42.175 64.362 1.00 0.00 C ATOM 84 O GLY 86 36.920 42.073 63.164 1.00 0.00 O ATOM 85 N MET 87 37.605 41.185 65.109 1.00 0.00 N ATOM 86 CA MET 87 37.938 39.908 64.494 1.00 0.00 C ATOM 87 C MET 87 36.674 39.155 64.068 1.00 0.00 C ATOM 88 O MET 87 36.798 38.314 63.168 1.00 0.00 O ATOM 89 N LYS 88 35.558 39.455 64.691 1.00 0.00 N ATOM 90 CA LYS 88 34.287 38.880 64.275 1.00 0.00 C ATOM 91 C LYS 88 33.997 39.336 62.829 1.00 0.00 C ATOM 92 O LYS 88 33.705 38.515 61.949 1.00 0.00 O ATOM 93 N VAL 89 34.192 40.639 62.597 1.00 0.00 N ATOM 94 CA VAL 89 34.001 41.160 61.231 1.00 0.00 C ATOM 95 C VAL 89 35.093 40.670 60.318 1.00 0.00 C ATOM 96 O VAL 89 34.790 40.484 59.150 1.00 0.00 O ATOM 97 N TYR 90 36.343 40.398 60.709 1.00 0.00 N ATOM 98 CA TYR 90 37.361 39.980 59.738 1.00 0.00 C ATOM 99 C TYR 90 37.210 38.498 59.327 1.00 0.00 C ATOM 100 O TYR 90 37.475 38.076 58.169 1.00 0.00 O ATOM 101 N PHE 91 36.671 37.656 60.211 1.00 0.00 N ATOM 102 CA PHE 91 36.336 36.288 59.837 1.00 0.00 C ATOM 103 C PHE 91 35.258 36.310 58.742 1.00 0.00 C ATOM 104 O PHE 91 35.326 35.565 57.803 1.00 0.00 O ATOM 105 N GLN 92 34.261 37.171 58.815 1.00 0.00 N ATOM 106 CA GLN 92 33.242 37.315 57.784 1.00 0.00 C ATOM 107 C GLN 92 33.873 37.818 56.470 1.00 0.00 C ATOM 108 O GLN 92 33.667 37.086 55.487 1.00 0.00 O ATOM 109 N LEU 93 34.680 38.869 56.468 1.00 0.00 N ATOM 110 CA LEU 93 35.415 39.275 55.284 1.00 0.00 C ATOM 111 C LEU 93 36.232 38.106 54.715 1.00 0.00 C ATOM 112 O LEU 93 36.259 37.941 53.517 1.00 0.00 O ATOM 113 N GLY 94 36.895 37.296 55.502 1.00 0.00 N ATOM 114 CA GLY 94 37.772 36.235 55.034 1.00 0.00 C ATOM 115 C GLY 94 36.959 35.105 54.425 1.00 0.00 C ATOM 116 O GLY 94 37.232 34.665 53.300 1.00 0.00 O ATOM 117 N ALA 95 35.821 34.782 55.018 1.00 0.00 N ATOM 118 CA ALA 95 34.963 33.726 54.406 1.00 0.00 C ATOM 119 C ALA 95 34.461 34.160 53.027 1.00 0.00 C ATOM 120 O ALA 95 34.494 33.374 52.065 1.00 0.00 O ATOM 121 N ASP 96 34.051 35.443 52.952 1.00 0.00 N ATOM 122 CA ASP 96 33.601 36.043 51.725 1.00 0.00 C ATOM 123 C ASP 96 34.652 36.163 50.637 1.00 0.00 C ATOM 124 O ASP 96 34.371 36.007 49.444 1.00 0.00 O ATOM 125 N ILE 97 35.908 36.351 50.981 1.00 0.00 N ATOM 126 CA ILE 97 37.016 36.443 50.023 1.00 0.00 C ATOM 127 C ILE 97 37.436 35.104 49.456 1.00 0.00 C ATOM 128 O ILE 97 37.806 34.871 48.285 1.00 0.00 O ATOM 129 N ASP 98 37.446 34.064 50.288 1.00 0.00 N ATOM 130 CA ASP 98 37.665 32.650 49.903 1.00 0.00 C ATOM 131 C ASP 98 36.593 32.126 48.915 1.00 0.00 C ATOM 132 O ASP 98 36.928 31.584 47.862 1.00 0.00 O ATOM 133 N MET 99 35.328 32.424 49.098 1.00 0.00 N ATOM 134 CA MET 99 34.243 32.006 48.207 1.00 0.00 C ATOM 135 C MET 99 34.355 32.815 46.909 1.00 0.00 C ATOM 136 O MET 99 34.373 32.244 45.811 1.00 0.00 O ATOM 137 N ALA 100 34.519 34.150 47.066 1.00 0.00 N ATOM 138 CA ALA 100 34.769 34.980 45.873 1.00 0.00 C ATOM 139 C ALA 100 35.976 34.518 45.083 1.00 0.00 C ATOM 140 O ALA 100 35.849 34.432 43.842 1.00 0.00 O ATOM 141 N GLY 101 37.101 34.156 45.653 1.00 0.00 N ATOM 142 CA GLY 101 38.230 33.639 44.877 1.00 0.00 C ATOM 143 C GLY 101 37.957 32.285 44.269 1.00 0.00 C ATOM 144 O GLY 101 38.334 32.046 43.125 1.00 0.00 O ATOM 145 N ILE 102 37.259 31.370 44.921 1.00 0.00 N ATOM 146 CA ILE 102 36.898 30.081 44.340 1.00 0.00 C ATOM 147 C ILE 102 36.020 30.304 43.106 1.00 0.00 C ATOM 148 O ILE 102 36.208 29.644 42.088 1.00 0.00 O ATOM 149 N ASP 103 35.027 31.190 43.186 1.00 0.00 N ATOM 150 CA ASP 103 34.168 31.502 42.017 1.00 0.00 C ATOM 151 C ASP 103 34.903 32.178 40.861 1.00 0.00 C ATOM 152 O ASP 103 34.615 31.860 39.696 1.00 0.00 O ATOM 153 N ASP 104 35.799 33.160 41.060 1.00 0.00 N ATOM 154 CA ASP 104 36.547 33.813 40.003 1.00 0.00 C ATOM 155 C ASP 104 37.613 32.924 39.331 1.00 0.00 C ATOM 156 O ASP 104 37.673 32.928 38.108 1.00 0.00 O ATOM 157 N TRP 105 38.282 32.028 40.072 1.00 0.00 N ATOM 158 CA TRP 105 39.209 31.078 39.447 1.00 0.00 C ATOM 159 C TRP 105 38.449 30.106 38.540 1.00 0.00 C ATOM 160 O TRP 105 38.856 29.878 37.401 1.00 0.00 O ATOM 161 N GLN 106 37.334 29.578 38.981 1.00 0.00 N ATOM 162 CA GLN 106 36.474 28.663 38.240 1.00 0.00 C ATOM 163 C GLN 106 35.976 29.351 36.945 1.00 0.00 C ATOM 164 O GLN 106 35.877 28.761 35.873 1.00 0.00 O ATOM 165 N SER 107 35.617 30.630 37.096 1.00 0.00 N ATOM 166 CA SER 107 35.191 31.408 35.952 1.00 0.00 C ATOM 167 C SER 107 36.320 31.648 34.946 1.00 0.00 C ATOM 168 O SER 107 36.046 32.196 33.867 1.00 0.00 O ATOM 169 N LEU 108 37.553 31.193 35.169 1.00 0.00 N ATOM 170 CA LEU 108 38.574 31.307 34.110 1.00 0.00 C ATOM 171 C LEU 108 38.614 30.040 33.277 1.00 0.00 C ATOM 172 O LEU 108 39.310 29.941 32.241 1.00 0.00 O ATOM 173 N ASN 109 37.968 28.986 33.720 1.00 0.00 N ATOM 174 CA ASN 109 37.966 27.701 32.978 1.00 0.00 C ATOM 175 C ASN 109 37.476 27.922 31.538 1.00 0.00 C ATOM 176 O ASN 109 37.875 27.158 30.661 1.00 0.00 O ATOM 177 N GLY 110 36.542 28.896 31.361 1.00 0.00 N ATOM 178 CA GLY 110 36.017 29.119 29.999 1.00 0.00 C ATOM 179 C GLY 110 36.892 30.037 29.136 1.00 0.00 C ATOM 180 O GLY 110 36.548 30.210 27.945 1.00 0.00 O ATOM 181 N SER 111 37.947 30.668 29.656 1.00 0.00 N ATOM 182 CA SER 111 38.810 31.456 28.766 1.00 0.00 C ATOM 183 C SER 111 40.268 30.978 28.651 1.00 0.00 C ATOM 184 O SER 111 40.917 31.150 27.614 1.00 0.00 O ATOM 185 N GLY 112 40.844 30.481 29.728 1.00 0.00 N ATOM 186 CA GLY 112 42.241 30.111 29.904 1.00 0.00 C ATOM 187 C GLY 112 42.478 28.633 29.621 1.00 0.00 C ATOM 188 O GLY 112 41.559 27.811 29.660 1.00 0.00 O ATOM 189 N ASP 113 43.750 28.299 29.295 1.00 0.00 N ATOM 190 CA ASP 113 44.189 26.943 29.046 1.00 0.00 C ATOM 191 C ASP 113 43.761 26.009 30.182 1.00 0.00 C ATOM 192 O ASP 113 43.422 24.874 29.856 1.00 0.00 O ATOM 193 N PHE 114 43.836 26.398 31.447 1.00 0.00 N ATOM 194 CA PHE 114 43.364 25.499 32.509 1.00 0.00 C ATOM 195 C PHE 114 43.080 26.325 33.778 1.00 0.00 C ATOM 196 O PHE 114 43.508 27.474 33.723 1.00 0.00 O ATOM 197 N PRO 115 42.325 25.734 34.703 1.00 0.00 N ATOM 198 CA PRO 115 42.029 26.428 35.958 1.00 0.00 C ATOM 199 C PRO 115 42.582 25.618 37.128 1.00 0.00 C ATOM 200 O PRO 115 42.563 24.377 37.139 1.00 0.00 O ATOM 201 N TYR 116 43.121 26.243 38.151 1.00 0.00 N ATOM 202 CA TYR 116 43.684 25.597 39.329 1.00 0.00 C ATOM 203 C TYR 116 42.703 24.681 40.079 1.00 0.00 C ATOM 204 O TYR 116 41.635 25.139 40.445 1.00 0.00 O ATOM 205 N GLU 117 43.038 23.401 40.314 1.00 0.00 N ATOM 206 CA GLU 117 42.123 22.533 41.079 1.00 0.00 C ATOM 207 C GLU 117 42.306 22.867 42.557 1.00 0.00 C ATOM 208 O GLU 117 43.424 22.950 43.077 1.00 0.00 O ATOM 209 N ILE 118 41.192 23.179 43.212 1.00 0.00 N ATOM 210 CA ILE 118 41.272 23.623 44.611 1.00 0.00 C ATOM 211 C ILE 118 40.082 23.049 45.370 1.00 0.00 C ATOM 212 O ILE 118 39.242 22.502 44.691 1.00 0.00 O ATOM 213 N ASP 119 40.067 23.138 46.679 1.00 0.00 N ATOM 214 CA ASP 119 38.995 22.619 47.500 1.00 0.00 C ATOM 215 C ASP 119 38.737 23.617 48.629 1.00 0.00 C ATOM 216 O ASP 119 39.675 23.897 49.371 1.00 0.00 O ATOM 217 N PHE 120 37.512 24.075 48.713 1.00 0.00 N ATOM 218 CA PHE 120 37.163 25.018 49.793 1.00 0.00 C ATOM 219 C PHE 120 36.303 24.314 50.832 1.00 0.00 C ATOM 220 O PHE 120 35.596 23.351 50.513 1.00 0.00 O ATOM 221 N ASP 121 36.368 24.676 52.087 1.00 0.00 N ATOM 222 CA ASP 121 35.506 24.098 53.111 1.00 0.00 C ATOM 223 C ASP 121 35.525 25.180 54.207 1.00 0.00 C ATOM 224 O ASP 121 36.580 25.571 54.693 1.00 0.00 O ATOM 225 N GLY 122 34.330 25.692 54.400 1.00 0.00 N ATOM 226 CA GLY 122 34.112 26.785 55.321 1.00 0.00 C ATOM 227 C GLY 122 34.057 26.313 56.762 1.00 0.00 C ATOM 228 O GLY 122 33.493 27.026 57.583 1.00 0.00 O ATOM 229 N ASP 123 34.535 25.105 57.033 1.00 0.00 N ATOM 230 CA ASP 123 34.483 24.461 58.354 1.00 0.00 C ATOM 231 C ASP 123 35.506 25.011 59.337 1.00 0.00 C ATOM 232 O ASP 123 35.240 25.320 60.502 1.00 0.00 O ATOM 233 N SER 124 36.739 25.171 58.851 1.00 0.00 N ATOM 234 CA SER 124 37.747 25.821 59.684 1.00 0.00 C ATOM 235 C SER 124 37.245 27.224 60.030 1.00 0.00 C ATOM 236 O SER 124 37.581 27.682 61.123 1.00 0.00 O ATOM 237 N HIS 125 36.491 27.873 59.131 1.00 0.00 N ATOM 238 CA HIS 125 35.991 29.217 59.346 1.00 0.00 C ATOM 239 C HIS 125 34.835 29.168 60.359 1.00 0.00 C ATOM 240 O HIS 125 34.636 30.068 61.177 1.00 0.00 O ATOM 241 N VAL 126 34.072 28.094 60.232 1.00 0.00 N ATOM 242 CA VAL 126 32.901 27.880 61.074 1.00 0.00 C ATOM 243 C VAL 126 33.260 27.455 62.496 1.00 0.00 C ATOM 244 O VAL 126 32.637 27.900 63.457 1.00 0.00 O ATOM 245 N ILE 127 34.316 26.695 62.607 1.00 0.00 N ATOM 246 CA ILE 127 34.828 26.291 63.926 1.00 0.00 C ATOM 247 C ILE 127 35.284 27.548 64.660 1.00 0.00 C ATOM 248 O ILE 127 34.843 27.871 65.749 1.00 0.00 O ATOM 249 N LYS 128 36.116 28.327 63.948 1.00 0.00 N ATOM 250 CA LYS 128 36.618 29.579 64.462 1.00 0.00 C ATOM 251 C LYS 128 35.541 30.607 64.789 1.00 0.00 C ATOM 252 O LYS 128 35.760 31.346 65.761 1.00 0.00 O ATOM 253 N ASN 129 34.453 30.661 64.014 1.00 0.00 N ATOM 254 CA ASN 129 33.406 31.637 64.358 1.00 0.00 C ATOM 255 C ASN 129 32.628 31.241 65.627 1.00 0.00 C ATOM 256 O ASN 129 32.256 32.120 66.414 1.00 0.00 O ATOM 257 N PHE 130 32.329 29.961 65.872 1.00 0.00 N ATOM 258 CA PHE 130 31.577 29.642 67.091 1.00 0.00 C ATOM 259 C PHE 130 32.502 29.828 68.290 1.00 0.00 C ATOM 260 O PHE 130 32.140 30.448 69.283 1.00 0.00 O ATOM 261 N LYS 131 33.728 29.352 68.127 1.00 0.00 N ATOM 262 CA LYS 131 34.776 29.508 69.123 1.00 0.00 C ATOM 263 C LYS 131 34.876 30.940 69.631 1.00 0.00 C ATOM 264 O LYS 131 34.914 31.231 70.816 1.00 0.00 O ATOM 265 N CYS 132 34.970 31.896 68.697 1.00 0.00 N ATOM 266 CA CYS 132 35.045 33.301 69.026 1.00 0.00 C ATOM 267 C CYS 132 33.731 33.735 69.670 1.00 0.00 C ATOM 268 O CYS 132 33.739 34.519 70.611 1.00 0.00 O ATOM 269 N SER 133 32.593 33.236 69.208 1.00 0.00 N ATOM 270 CA SER 133 31.295 33.588 69.749 1.00 0.00 C ATOM 271 C SER 133 31.154 33.127 71.203 1.00 0.00 C ATOM 272 O SER 133 30.441 33.769 71.977 1.00 0.00 O ATOM 273 N ALA 134 31.781 32.023 71.555 1.00 0.00 N ATOM 274 CA ALA 134 31.722 31.497 72.920 1.00 0.00 C ATOM 275 C ALA 134 32.415 32.492 73.846 1.00 0.00 C ATOM 276 O ALA 134 31.895 32.954 74.861 1.00 0.00 O ATOM 277 N GLY 135 33.616 32.884 73.422 1.00 0.00 N ATOM 278 CA GLY 135 34.411 33.854 74.170 1.00 0.00 C ATOM 279 C GLY 135 33.690 35.191 74.284 1.00 0.00 C ATOM 280 O GLY 135 33.611 35.741 75.384 1.00 0.00 O ATOM 281 N ASP 136 33.167 35.745 73.198 1.00 0.00 N ATOM 282 CA ASP 136 32.477 37.024 73.231 1.00 0.00 C ATOM 283 C ASP 136 31.248 36.959 74.147 1.00 0.00 C ATOM 284 O ASP 136 30.913 37.879 74.889 1.00 0.00 O ATOM 285 N TYR 137 30.541 35.838 74.053 1.00 0.00 N ATOM 286 CA TYR 137 29.296 35.619 74.761 1.00 0.00 C ATOM 287 C TYR 137 29.506 35.422 76.259 1.00 0.00 C ATOM 288 O TYR 137 28.858 36.027 77.095 1.00 0.00 O ATOM 289 N PRO 138 30.398 34.465 76.510 1.00 0.00 N ATOM 290 CA PRO 138 30.751 34.014 77.841 1.00 0.00 C ATOM 291 C PRO 138 31.654 35.026 78.527 1.00 0.00 C ATOM 292 O PRO 138 32.548 34.620 79.274 1.00 0.00 O ATOM 293 N SER 139 31.399 36.305 78.242 1.00 0.00 N ATOM 294 CA SER 139 32.169 37.382 78.847 1.00 0.00 C ATOM 295 C SER 139 31.370 38.095 79.935 1.00 0.00 C ATOM 296 O SER 139 30.720 37.419 80.730 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 296 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 94.57 32.2 146 25.6 570 ARMSMC SECONDARY STRUCTURE . . 100.33 23.7 38 15.7 242 ARMSMC SURFACE . . . . . . . . 97.79 27.6 87 32.0 272 ARMSMC BURIED . . . . . . . . 89.61 39.0 59 19.8 298 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 214 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 192 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 91 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 114 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 100 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 139 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 109 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 57 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 77 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 62 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 42 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 36 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 15 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 33 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 23 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 23 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 9 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 18 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 18.82 (Number of atoms: 74) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 18.82 74 25.9 286 CRMSCA CRN = ALL/NP . . . . . 0.2544 CRMSCA SECONDARY STRUCTURE . . 15.65 19 15.7 121 CRMSCA SURFACE . . . . . . . . 19.12 44 32.1 137 CRMSCA BURIED . . . . . . . . 18.37 30 20.1 149 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 18.81 296 21.4 1386 CRMSMC SECONDARY STRUCTURE . . 15.51 76 13.0 586 CRMSMC SURFACE . . . . . . . . 19.03 176 26.2 673 CRMSMC BURIED . . . . . . . . 18.47 120 16.8 713 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 914 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 794 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 399 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 495 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 419 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 18.81 296 14.4 2058 CRMSALL SECONDARY STRUCTURE . . 15.51 76 8.6 883 CRMSALL SURFACE . . . . . . . . 19.03 176 16.9 1043 CRMSALL BURIED . . . . . . . . 18.47 120 11.8 1015 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.196 1.000 0.500 74 25.9 286 ERRCA SECONDARY STRUCTURE . . 14.883 1.000 0.500 19 15.7 121 ERRCA SURFACE . . . . . . . . 18.594 1.000 0.500 44 32.1 137 ERRCA BURIED . . . . . . . . 17.612 1.000 0.500 30 20.1 149 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.164 1.000 0.500 296 21.4 1386 ERRMC SECONDARY STRUCTURE . . 14.701 1.000 0.500 76 13.0 586 ERRMC SURFACE . . . . . . . . 18.456 1.000 0.500 176 26.2 673 ERRMC BURIED . . . . . . . . 17.735 1.000 0.500 120 16.8 713 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 914 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 794 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 399 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 495 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 419 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 18.164 1.000 0.500 296 14.4 2058 ERRALL SECONDARY STRUCTURE . . 14.701 1.000 0.500 76 8.6 883 ERRALL SURFACE . . . . . . . . 18.456 1.000 0.500 176 16.9 1043 ERRALL BURIED . . . . . . . . 17.735 1.000 0.500 120 11.8 1015 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 0 6 74 286 DISTCA CA (P) 0.00 0.00 0.00 0.00 2.10 286 DISTCA CA (RMS) 0.00 0.00 0.00 0.00 7.75 DISTCA ALL (N) 0 0 0 2 21 296 2058 DISTALL ALL (P) 0.00 0.00 0.00 0.10 1.02 2058 DISTALL ALL (RMS) 0.00 0.00 0.00 4.30 7.37 DISTALL END of the results output