####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 110 ( 440), selected 110 , name T0537AL285_1 # Molecule2: number of CA atoms 339 ( 2467), selected 110 , name T0537.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0537AL285_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 43 129 - 174 4.67 11.08 LCS_AVERAGE: 9.26 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 147 - 165 1.98 11.58 LCS_AVERAGE: 3.30 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 147 - 155 0.69 11.57 LCS_AVERAGE: 1.56 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 110 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT Q 75 Q 75 5 10 26 4 5 9 9 14 24 32 34 40 54 56 60 64 68 75 82 89 95 100 103 LCS_GDT I 76 I 76 5 10 26 4 5 9 11 14 26 32 40 46 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT R 77 R 77 7 10 26 4 5 9 11 14 26 32 40 46 54 58 61 64 68 77 84 89 95 100 103 LCS_GDT N 78 N 78 7 10 26 4 6 9 9 14 26 32 40 46 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT M 79 M 79 7 10 26 5 6 9 9 13 19 29 42 44 53 58 61 64 71 77 84 89 95 100 103 LCS_GDT R 80 R 80 7 10 26 5 6 9 12 19 36 39 46 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT S 81 S 81 7 10 26 5 11 14 19 24 36 41 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT V 82 V 82 7 10 26 5 6 9 10 15 29 36 46 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT L 83 L 83 7 10 26 5 6 9 11 15 26 30 36 48 53 58 61 64 71 77 84 89 95 100 103 LCS_GDT K 84 K 84 3 10 26 3 4 10 17 28 37 42 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT S 85 S 85 3 3 26 3 3 7 11 14 17 22 32 38 48 54 57 62 65 71 75 79 91 99 103 LCS_GDT G 86 G 86 3 3 26 3 3 3 3 5 11 13 16 27 38 49 55 60 63 69 73 79 81 87 97 LCS_GDT M 87 M 87 3 13 26 3 3 10 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT K 88 K 88 8 13 26 4 7 11 20 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT V 89 V 89 8 13 26 4 11 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT Y 90 Y 90 8 13 26 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT F 91 F 91 8 13 26 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT Q 92 Q 92 8 13 26 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT L 93 L 93 8 13 26 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT G 94 G 94 8 13 26 4 7 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT A 95 A 95 8 13 26 3 4 10 17 29 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT D 96 D 96 5 13 26 4 5 13 25 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT I 97 I 97 5 13 26 4 8 13 24 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT D 98 D 98 5 13 26 4 5 12 23 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT M 99 M 99 5 13 26 4 5 7 13 26 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT A 100 A 100 5 13 26 2 5 7 8 17 29 40 47 51 54 58 61 64 71 77 83 89 95 100 103 LCS_GDT G 101 G 101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 15 18 20 21 LCS_GDT I 102 I 102 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 2 2 22 26 29 32 33 LCS_GDT G 112 G 112 0 6 19 0 2 16 24 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT D 113 D 113 4 6 19 0 4 4 10 16 31 40 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT F 114 F 114 4 10 19 1 7 12 19 24 36 40 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT P 115 P 115 4 10 19 3 4 4 14 29 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT Y 116 Y 116 6 10 19 3 4 8 12 22 27 35 44 51 54 58 61 64 71 76 84 89 94 99 103 LCS_GDT E 117 E 117 6 10 19 4 11 13 18 24 36 41 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT I 118 I 118 6 10 19 3 11 16 23 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT D 119 D 119 6 10 19 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT F 120 F 120 6 10 19 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT D 121 D 121 6 10 19 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT G 122 G 122 6 10 19 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT D 123 D 123 6 10 19 3 9 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT S 124 S 124 6 10 19 3 4 10 17 29 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT H 125 H 125 3 10 42 3 3 5 7 15 32 43 46 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT N 129 N 129 4 8 43 2 6 7 12 20 24 28 31 35 38 40 44 54 66 76 84 89 95 100 103 LCS_GDT F 130 F 130 4 8 43 3 6 8 10 15 18 21 29 33 37 46 55 64 71 77 84 89 95 100 103 LCS_GDT K 131 K 131 4 8 43 4 6 8 12 18 23 28 31 35 38 43 52 63 71 77 84 89 95 100 103 LCS_GDT C 132 C 132 4 8 43 3 5 9 12 21 24 28 31 35 38 46 54 64 71 77 84 89 95 100 103 LCS_GDT S 133 S 133 4 8 43 4 5 9 12 21 24 28 31 35 38 42 49 61 70 76 84 89 95 100 103 LCS_GDT A 134 A 134 3 8 43 3 4 7 12 20 24 28 31 35 38 42 50 61 70 76 84 89 95 100 103 LCS_GDT G 135 G 135 3 8 43 1 4 6 7 7 14 18 20 24 27 31 38 39 46 54 63 69 73 85 90 LCS_GDT D 136 D 136 3 8 43 0 4 6 9 11 11 13 18 20 21 24 26 34 38 42 49 58 65 68 79 LCS_GDT Y 137 Y 137 3 5 43 0 3 3 4 7 11 14 31 42 44 45 51 57 71 77 84 89 95 100 103 LCS_GDT P 138 P 138 4 5 43 3 3 9 17 26 35 43 45 47 53 57 61 64 71 77 84 89 95 100 103 LCS_GDT S 139 S 139 4 5 43 3 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT F 140 F 140 4 5 43 3 12 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT F 141 F 141 4 12 43 3 8 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT G 142 G 142 4 12 43 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT G 146 G 146 3 13 43 0 3 3 9 13 22 28 31 35 38 40 44 53 66 74 83 89 95 100 103 LCS_GDT D 147 D 147 9 19 43 4 9 12 14 21 24 28 31 35 38 40 44 48 55 62 78 83 95 100 103 LCS_GDT C 148 C 148 9 19 43 4 9 12 14 21 24 28 31 35 38 40 44 48 55 63 78 87 95 100 103 LCS_GDT R 149 R 149 9 19 43 5 9 12 14 21 24 28 31 35 38 40 44 48 53 61 70 82 90 100 103 LCS_GDT N 150 N 150 9 19 43 5 9 12 14 21 24 28 31 35 38 40 44 48 52 60 70 77 87 96 103 LCS_GDT V 151 V 151 9 19 43 5 9 12 14 21 24 28 31 35 38 40 44 48 53 61 70 82 90 100 103 LCS_GDT G 152 G 152 9 19 43 5 9 12 14 21 24 28 31 35 38 40 44 48 54 62 74 84 95 100 103 LCS_GDT F 153 F 153 9 19 43 5 9 12 14 21 24 28 31 35 38 40 44 48 56 67 80 89 95 100 103 LCS_GDT V 154 V 154 9 19 43 3 7 12 14 21 24 28 31 35 38 40 44 48 55 65 78 89 95 100 103 LCS_GDT N 155 N 155 9 19 43 3 9 12 14 21 24 28 31 35 38 40 44 48 56 66 78 89 95 100 103 LCS_GDT A 156 A 156 6 19 43 4 6 8 12 21 24 28 31 35 38 42 52 64 71 77 84 89 95 100 103 LCS_GDT S 157 S 157 6 19 43 4 6 9 12 21 24 28 31 35 38 42 52 61 71 77 84 89 95 100 103 LCS_GDT V 158 V 158 6 19 43 4 6 9 12 21 24 28 31 35 41 50 58 64 71 77 84 89 95 100 103 LCS_GDT S 159 S 159 6 19 43 4 6 9 12 16 23 28 30 35 38 42 49 61 70 76 84 89 95 100 103 LCS_GDT S 160 S 160 5 19 43 0 3 9 12 21 24 28 31 35 38 42 49 59 70 76 83 89 95 100 103 LCS_GDT A 161 A 161 3 19 43 3 8 12 14 21 24 28 31 35 38 42 50 61 70 77 84 89 95 100 103 LCS_GDT R 162 R 162 3 19 43 3 4 8 14 21 24 28 31 35 38 42 50 61 70 76 84 89 95 100 103 LCS_GDT Q 163 Q 163 3 19 43 3 8 12 14 21 24 28 31 42 44 50 57 64 71 77 84 89 95 100 103 LCS_GDT G 164 G 164 3 19 43 3 9 11 14 21 26 39 43 47 50 55 60 64 71 77 84 89 95 100 103 LCS_GDT I 165 I 165 3 19 43 3 8 12 19 31 39 43 45 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT G 166 G 166 3 11 43 3 3 8 21 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT I 167 I 167 3 7 43 3 4 8 18 23 31 40 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT I 168 I 168 3 6 43 3 3 4 4 7 17 20 30 34 41 57 60 64 66 77 84 89 95 100 103 LCS_GDT T 169 T 169 3 5 43 3 3 8 12 14 27 30 41 46 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT G 170 G 170 4 5 43 3 4 4 18 20 27 36 45 50 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT Y 171 Y 171 4 5 43 3 4 4 4 7 7 19 23 46 51 57 61 64 71 77 84 89 95 100 103 LCS_GDT L 172 L 172 4 5 43 3 4 4 4 7 7 9 16 20 33 38 44 48 59 65 72 86 95 100 103 LCS_GDT G 173 G 173 4 5 43 3 4 4 4 7 7 9 16 22 33 38 44 48 52 61 69 77 90 100 103 LCS_GDT L 174 L 174 4 6 43 3 4 4 5 6 9 10 11 15 24 30 36 50 59 67 73 89 95 100 103 LCS_GDT K 175 K 175 4 6 39 3 4 5 5 6 9 10 11 17 21 25 31 36 50 54 66 72 78 83 103 LCS_GDT D 176 D 176 4 6 39 3 4 5 5 7 9 11 11 15 22 38 43 50 55 71 78 89 95 100 103 LCS_GDT K 177 K 177 4 6 39 3 4 5 5 6 10 13 22 35 41 45 54 64 71 77 84 89 95 100 103 LCS_GDT G 178 G 178 4 6 39 3 4 5 8 11 17 21 25 32 44 45 51 60 71 77 84 89 95 100 103 LCS_GDT N 179 N 179 4 6 23 3 4 5 8 11 17 21 35 42 44 45 51 61 71 77 84 89 95 100 103 LCS_GDT G 180 G 180 3 4 23 3 3 3 8 11 17 21 25 32 44 45 51 59 70 77 84 89 95 100 103 LCS_GDT N 181 N 181 4 8 23 0 4 5 7 11 19 30 35 42 44 49 57 64 71 77 84 89 95 100 103 LCS_GDT K 182 K 182 4 14 23 3 4 9 16 27 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT T 183 T 183 7 14 23 5 11 16 23 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT G 184 G 184 7 14 23 5 11 16 23 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT R 185 R 185 7 14 23 4 11 17 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT I 186 I 186 8 14 23 5 11 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT V 187 V 187 8 14 23 5 12 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT N 188 N 188 8 14 23 5 11 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT C 189 C 189 8 14 23 5 11 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT Y 190 Y 190 8 14 23 5 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT T 191 T 191 8 14 23 5 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT T 192 T 192 8 14 23 5 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT G 193 G 193 8 14 23 3 7 11 26 31 38 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT E 194 E 194 8 14 23 3 9 16 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 LCS_GDT V 195 V 195 4 14 23 3 3 8 17 21 35 39 44 47 53 57 61 64 71 77 84 89 95 100 103 LCS_GDT I 196 I 196 4 14 23 3 4 5 11 18 28 32 35 44 49 51 57 64 71 77 84 89 95 100 103 LCS_GDT G 197 G 197 3 14 23 3 4 8 17 21 35 39 43 45 49 53 60 64 71 77 84 89 95 100 103 LCS_GDT S 198 S 198 3 4 23 3 3 3 6 10 16 24 33 39 46 54 60 64 71 77 84 89 95 100 103 LCS_GDT G 199 G 199 3 4 23 3 3 3 5 7 7 19 19 23 35 41 48 59 67 73 81 87 93 99 103 LCS_AVERAGE LCS_A: 4.71 ( 1.56 3.30 9.26 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 13 21 26 33 39 43 47 51 54 58 61 64 71 77 84 89 95 100 103 GDT PERCENT_AT 2.06 3.83 6.19 7.67 9.73 11.50 12.68 13.86 15.04 15.93 17.11 17.99 18.88 20.94 22.71 24.78 26.25 28.02 29.50 30.38 GDT RMS_LOCAL 0.33 0.80 1.03 1.27 1.72 2.01 2.19 2.50 2.69 2.88 3.16 3.34 3.56 4.52 5.14 5.54 5.80 6.38 6.68 6.83 GDT RMS_ALL_AT 9.19 9.24 9.23 9.25 9.17 9.10 9.05 9.27 9.21 9.30 9.37 9.30 9.33 8.80 8.38 8.31 8.25 8.05 8.02 8.01 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA Q 75 Q 75 6.747 5 0.065 0.065 7.563 14.762 6.561 LGA I 76 I 76 6.003 4 0.041 0.041 6.380 17.143 8.571 LGA R 77 R 77 6.867 7 0.140 0.140 6.867 13.333 4.848 LGA N 78 N 78 6.083 4 0.159 0.159 6.349 19.286 9.643 LGA M 79 M 79 5.881 4 0.041 0.041 5.881 23.810 11.905 LGA R 80 R 80 4.854 7 0.098 0.098 5.133 30.119 10.952 LGA S 81 S 81 4.270 2 0.151 0.151 4.278 37.143 24.762 LGA V 82 V 82 4.620 3 0.251 0.251 5.444 30.238 17.279 LGA L 83 L 83 6.129 4 0.608 0.608 6.129 22.738 11.369 LGA K 84 K 84 2.804 5 0.641 0.641 5.213 39.524 17.566 LGA S 85 S 85 8.049 2 0.030 0.030 10.200 6.190 4.127 LGA G 86 G 86 8.667 0 0.683 0.683 8.667 7.738 7.738 LGA M 87 M 87 3.664 4 0.057 0.057 4.470 54.524 27.262 LGA K 88 K 88 2.196 5 0.522 0.522 2.196 68.810 30.582 LGA V 89 V 89 1.253 3 0.049 0.049 1.337 85.952 49.116 LGA Y 90 Y 90 1.042 8 0.088 0.088 1.042 88.214 29.405 LGA F 91 F 91 1.263 7 0.065 0.065 1.408 81.429 29.610 LGA Q 92 Q 92 0.921 5 0.035 0.035 0.972 90.476 40.212 LGA L 93 L 93 1.257 4 0.046 0.046 1.880 81.548 40.774 LGA G 94 G 94 1.694 0 0.671 0.671 4.545 62.619 62.619 LGA A 95 A 95 2.905 1 0.729 0.729 3.635 59.524 47.619 LGA D 96 D 96 2.155 4 0.635 0.635 2.155 75.119 37.560 LGA I 97 I 97 2.051 4 0.090 0.090 2.554 62.857 31.429 LGA D 98 D 98 2.003 4 0.075 0.075 2.393 66.786 33.393 LGA M 99 M 99 2.867 4 0.564 0.564 4.258 50.357 25.179 LGA A 100 A 100 4.156 1 0.061 0.061 5.581 32.024 25.619 LGA G 101 G 101 25.724 0 0.084 0.084 25.724 0.000 0.000 LGA I 102 I 102 20.985 4 0.597 0.597 22.204 0.000 0.000 LGA G 112 G 112 1.544 0 0.675 0.675 4.588 58.571 58.571 LGA D 113 D 113 3.668 4 0.659 0.659 3.668 55.595 27.798 LGA F 114 F 114 4.069 7 0.404 0.404 4.339 41.905 15.238 LGA P 115 P 115 2.430 3 0.654 0.654 3.344 59.167 33.810 LGA Y 116 Y 116 5.237 8 0.164 0.164 5.706 29.048 9.683 LGA E 117 E 117 3.872 5 0.307 0.307 4.123 48.690 21.640 LGA I 118 I 118 1.732 4 0.027 0.027 2.285 79.643 39.821 LGA D 119 D 119 1.203 4 0.132 0.132 1.889 79.405 39.702 LGA F 120 F 120 1.869 7 0.076 0.076 2.381 68.810 25.022 LGA D 121 D 121 1.915 4 0.096 0.096 1.915 77.143 38.571 LGA G 122 G 122 0.494 0 0.668 0.668 2.758 84.524 84.524 LGA D 123 D 123 1.654 4 0.555 0.555 1.779 75.000 37.500 LGA S 124 S 124 3.382 2 0.630 0.630 3.773 51.905 34.603 LGA H 125 H 125 4.158 6 0.658 0.658 4.158 45.119 18.048 LGA N 129 N 129 13.937 4 0.563 0.563 14.245 0.000 0.000 LGA F 130 F 130 10.791 7 0.201 0.201 11.269 0.000 0.000 LGA K 131 K 131 11.404 5 0.036 0.036 11.404 0.000 0.000 LGA C 132 C 132 10.410 2 0.087 0.087 11.371 0.000 0.000 LGA S 133 S 133 13.441 2 0.400 0.400 13.834 0.000 0.000 LGA A 134 A 134 13.698 1 0.668 0.668 15.244 0.000 0.000 LGA G 135 G 135 19.872 0 0.600 0.600 20.393 0.000 0.000 LGA D 136 D 136 22.044 4 0.587 0.587 22.044 0.000 0.000 LGA Y 137 Y 137 10.247 8 0.092 0.092 11.801 2.381 0.794 LGA P 138 P 138 5.233 3 0.044 0.044 7.021 27.619 15.782 LGA S 139 S 139 2.675 2 0.083 0.083 3.155 55.357 36.905 LGA F 140 F 140 2.611 7 0.040 0.040 2.623 59.048 21.472 LGA F 141 F 141 2.891 7 0.674 0.674 5.411 47.619 17.316 LGA G 142 G 142 1.424 0 0.550 0.550 2.601 77.619 77.619 LGA G 146 G 146 11.776 0 0.091 0.091 11.776 0.119 0.119 LGA D 147 D 147 14.201 4 0.278 0.278 14.201 0.000 0.000 LGA C 148 C 148 12.914 2 0.055 0.055 13.844 0.000 0.000 LGA R 149 R 149 15.886 7 0.029 0.029 16.368 0.000 0.000 LGA N 150 N 150 17.256 4 0.198 0.198 17.256 0.000 0.000 LGA V 151 V 151 14.790 3 0.076 0.076 15.351 0.000 0.000 LGA G 152 G 152 14.140 0 0.066 0.066 14.446 0.000 0.000 LGA F 153 F 153 11.759 7 0.059 0.059 12.656 0.000 0.000 LGA V 154 V 154 13.720 3 0.096 0.096 13.735 0.000 0.000 LGA N 155 N 155 14.680 4 0.123 0.123 14.680 0.000 0.000 LGA A 156 A 156 10.570 1 0.063 0.063 11.434 0.000 0.000 LGA S 157 S 157 11.646 2 0.139 0.139 11.646 0.000 0.000 LGA V 158 V 158 9.912 3 0.106 0.106 11.113 0.119 0.068 LGA S 159 S 159 13.827 2 0.188 0.188 13.827 0.000 0.000 LGA S 160 S 160 14.256 2 0.129 0.129 16.275 0.000 0.000 LGA A 161 A 161 14.182 1 0.247 0.247 14.383 0.000 0.000 LGA R 162 R 162 13.993 7 0.689 0.689 14.068 0.000 0.000 LGA Q 163 Q 163 10.280 5 0.068 0.068 11.025 2.500 1.111 LGA G 164 G 164 6.688 0 0.048 0.048 8.309 10.000 10.000 LGA I 165 I 165 4.131 4 0.097 0.097 4.267 41.905 20.952 LGA G 166 G 166 2.888 0 0.624 0.624 3.249 65.357 65.357 LGA I 167 I 167 4.017 4 0.593 0.593 6.278 39.643 19.821 LGA I 168 I 168 7.048 4 0.602 0.602 7.048 16.667 8.333 LGA T 169 T 169 5.550 3 0.323 0.323 6.618 19.405 11.088 LGA G 170 G 170 4.792 0 0.396 0.396 6.080 26.548 26.548 LGA Y 171 Y 171 6.770 8 0.118 0.118 9.127 9.762 3.254 LGA L 172 L 172 12.615 4 0.182 0.182 13.472 0.000 0.000 LGA G 173 G 173 15.066 0 0.116 0.116 15.066 0.000 0.000 LGA L 174 L 174 13.219 4 0.086 0.086 14.290 0.000 0.000 LGA K 175 K 175 16.001 5 0.443 0.443 16.001 0.000 0.000 LGA D 176 D 176 16.170 4 0.242 0.242 16.330 0.000 0.000 LGA K 177 K 177 12.516 5 0.036 0.036 14.418 0.000 0.000 LGA G 178 G 178 13.877 0 0.652 0.652 13.877 0.000 0.000 LGA N 179 N 179 12.281 4 0.162 0.162 12.763 0.000 0.000 LGA G 180 G 180 11.928 0 0.684 0.684 12.024 0.357 0.357 LGA N 181 N 181 8.698 4 0.651 0.651 10.231 5.238 2.619 LGA K 182 K 182 3.623 5 0.696 0.696 4.625 55.119 24.497 LGA T 183 T 183 1.750 3 0.374 0.374 1.908 75.000 42.857 LGA G 184 G 184 1.622 0 0.079 0.079 1.850 75.000 75.000 LGA R 185 R 185 0.868 7 0.044 0.044 1.037 92.976 33.810 LGA I 186 I 186 1.147 4 0.033 0.033 1.300 83.690 41.845 LGA V 187 V 187 2.022 3 0.121 0.121 2.544 64.881 37.075 LGA N 188 N 188 2.209 4 0.071 0.071 2.493 64.762 32.381 LGA C 189 C 189 2.188 2 0.074 0.074 2.188 68.810 45.873 LGA Y 190 Y 190 1.726 8 0.101 0.101 2.143 70.833 23.611 LGA T 191 T 191 1.745 3 0.064 0.064 1.745 72.857 41.633 LGA T 192 T 192 1.820 3 0.064 0.064 2.684 66.905 38.231 LGA G 193 G 193 3.389 0 0.573 0.573 3.389 63.333 63.333 LGA E 194 E 194 2.926 5 0.053 0.053 6.856 37.738 16.772 LGA V 195 V 195 5.314 3 0.081 0.081 5.314 34.762 19.864 LGA I 196 I 196 8.036 4 0.644 0.644 9.977 5.000 2.500 LGA G 197 G 197 7.132 0 0.692 0.692 7.132 15.714 15.714 LGA S 198 S 198 8.981 2 0.422 0.422 12.123 1.905 1.270 LGA G 199 G 199 12.916 0 0.589 0.589 12.916 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 110 440 440 100.00 819 440 53.72 339 SUMMARY(RMSD_GDC): 8.002 7.926 7.926 10.423 5.976 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 110 339 4.0 47 2.50 12.537 10.443 1.810 LGA_LOCAL RMSD: 2.496 Number of atoms: 47 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.270 Number of assigned atoms: 110 Std_ASGN_ATOMS RMSD: 8.002 Standard rmsd on all 110 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.028538 * X + -0.856414 * Y + -0.515500 * Z + 88.270462 Y_new = -0.975525 * X + -0.088625 * Y + 0.201239 * Z + 33.047897 Z_new = -0.218030 * X + 0.508626 * Y + -0.832924 * Z + 141.140366 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.600042 0.219795 2.593379 [DEG: -91.6756 12.5933 148.5897 ] ZXZ: -1.942979 2.555168 -0.404970 [DEG: -111.3245 146.4003 -23.2031 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0537AL285_1 REMARK 2: T0537.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0537AL285_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 110 339 4.0 47 2.50 10.443 8.00 REMARK ---------------------------------------------------------- MOLECULE T0537AL285_1 REMARK Aligment from pdb entry: 1h80A ATOM 1 N GLN 75 42.903 42.305 42.985 1.00 0.00 ATOM 2 CA GLN 75 43.535 41.851 44.220 1.00 0.00 ATOM 3 C GLN 75 43.511 40.328 44.259 1.00 0.00 ATOM 4 O GLN 75 44.525 39.686 44.536 1.00 0.00 ATOM 5 N ILE 76 42.347 39.753 43.976 1.00 0.00 ATOM 6 CA ILE 76 42.215 38.304 43.988 1.00 0.00 ATOM 7 C ILE 76 43.063 37.656 42.903 1.00 0.00 ATOM 8 O ILE 76 43.708 36.636 43.142 1.00 0.00 ATOM 9 N ARG 77 43.086 38.246 41.711 1.00 0.00 ATOM 10 CA ARG 77 43.878 37.662 40.641 1.00 0.00 ATOM 11 C ARG 77 45.365 37.698 40.981 1.00 0.00 ATOM 12 O ARG 77 46.087 36.743 40.708 1.00 0.00 ATOM 13 N ASN 78 45.824 38.797 41.576 1.00 0.00 ATOM 14 CA ASN 78 47.228 38.893 41.961 1.00 0.00 ATOM 15 C ASN 78 47.558 37.838 43.013 1.00 0.00 ATOM 16 O ASN 78 48.633 37.243 42.983 1.00 0.00 ATOM 17 N MET 79 46.630 37.608 43.936 1.00 0.00 ATOM 18 CA MET 79 46.839 36.615 44.990 1.00 0.00 ATOM 19 C MET 79 46.962 35.229 44.376 1.00 0.00 ATOM 20 O MET 79 47.882 34.472 44.686 1.00 0.00 ATOM 21 N ARG 80 46.016 34.896 43.505 1.00 0.00 ATOM 22 CA ARG 80 46.018 33.607 42.831 1.00 0.00 ATOM 23 C ARG 80 47.311 33.414 42.043 1.00 0.00 ATOM 24 O ARG 80 47.953 32.371 42.128 1.00 0.00 ATOM 25 N SER 81 47.701 34.425 41.277 1.00 0.00 ATOM 26 CA SER 81 48.916 34.324 40.484 1.00 0.00 ATOM 27 C SER 81 50.148 34.113 41.359 1.00 0.00 ATOM 28 O SER 81 51.004 33.284 41.049 1.00 0.00 ATOM 29 N VAL 82 50.229 34.863 42.454 1.00 0.00 ATOM 30 CA VAL 82 51.361 34.760 43.366 1.00 0.00 ATOM 31 C VAL 82 51.463 33.366 43.970 1.00 0.00 ATOM 32 O VAL 82 52.546 32.788 44.045 1.00 0.00 ATOM 33 N LEU 83 50.329 32.822 44.388 1.00 0.00 ATOM 34 CA LEU 83 50.326 31.497 44.993 1.00 0.00 ATOM 35 C LEU 83 50.669 30.410 43.981 1.00 0.00 ATOM 36 O LEU 83 51.448 29.503 44.276 1.00 0.00 ATOM 37 N LYS 84 50.111 30.506 42.778 1.00 0.00 ATOM 38 CA LYS 84 50.365 29.489 41.769 1.00 0.00 ATOM 39 C LYS 84 51.817 29.460 41.300 1.00 0.00 ATOM 40 O LYS 84 52.278 28.451 40.768 1.00 0.00 ATOM 41 N SER 85 52.535 30.564 41.494 1.00 0.00 ATOM 42 CA SER 85 53.941 30.627 41.104 1.00 0.00 ATOM 43 C SER 85 54.814 29.786 42.035 1.00 0.00 ATOM 44 O SER 85 55.927 29.401 41.672 1.00 0.00 ATOM 45 N GLY 86 54.311 29.503 43.233 1.00 0.00 ATOM 46 CA GLY 86 55.060 28.699 44.199 1.00 0.00 ATOM 47 C GLY 86 54.967 27.221 43.816 1.00 0.00 ATOM 48 O GLY 86 53.887 26.714 43.516 1.00 0.00 ATOM 49 N MET 87 46.606 26.581 39.050 1.00 0.00 ATOM 50 CA MET 87 47.056 25.387 39.748 1.00 0.00 ATOM 51 C MET 87 47.639 25.610 41.131 1.00 0.00 ATOM 52 O MET 87 48.306 26.612 41.396 1.00 0.00 ATOM 53 N LYS 88 47.377 24.639 41.997 1.00 0.00 ATOM 54 CA LYS 88 47.871 24.621 43.360 1.00 0.00 ATOM 55 C LYS 88 47.448 25.794 44.223 1.00 0.00 ATOM 56 O LYS 88 48.166 26.199 45.133 1.00 0.00 ATOM 57 N VAL 89 46.270 26.329 43.929 1.00 0.00 ATOM 58 CA VAL 89 45.716 27.431 44.694 1.00 0.00 ATOM 59 C VAL 89 44.529 26.872 45.459 1.00 0.00 ATOM 60 O VAL 89 43.647 26.236 44.885 1.00 0.00 ATOM 61 N TYR 90 44.523 27.103 46.764 1.00 0.00 ATOM 62 CA TYR 90 43.465 26.604 47.620 1.00 0.00 ATOM 63 C TYR 90 42.879 27.761 48.387 1.00 0.00 ATOM 64 O TYR 90 43.501 28.313 49.291 1.00 0.00 ATOM 65 N PHE 91 41.672 28.135 47.985 1.00 0.00 ATOM 66 CA PHE 91 40.978 29.257 48.585 1.00 0.00 ATOM 67 C PHE 91 40.033 28.837 49.693 1.00 0.00 ATOM 68 O PHE 91 39.246 27.903 49.540 1.00 0.00 ATOM 69 N GLN 92 40.141 29.525 50.824 1.00 0.00 ATOM 70 CA GLN 92 39.278 29.268 51.964 1.00 0.00 ATOM 71 C GLN 92 38.586 30.581 52.254 1.00 0.00 ATOM 72 O GLN 92 39.216 31.639 52.296 1.00 0.00 ATOM 73 N LEU 93 37.279 30.509 52.447 1.00 0.00 ATOM 74 CA LEU 93 36.481 31.705 52.666 1.00 0.00 ATOM 75 C LEU 93 35.836 31.746 54.039 1.00 0.00 ATOM 76 O LEU 93 35.166 30.801 54.443 1.00 0.00 ATOM 77 N GLY 94 36.023 32.843 54.765 1.00 0.00 ATOM 78 CA GLY 94 35.417 32.928 56.086 1.00 0.00 ATOM 79 C GLY 94 33.895 32.914 55.993 1.00 0.00 ATOM 80 O GLY 94 33.310 33.294 54.976 1.00 0.00 ATOM 81 N ALA 95 33.265 32.469 57.071 1.00 0.00 ATOM 82 CA ALA 95 31.821 32.277 57.124 1.00 0.00 ATOM 83 C ALA 95 30.863 33.452 56.972 1.00 0.00 ATOM 84 O ALA 95 29.682 33.242 56.678 1.00 0.00 ATOM 85 N ASP 96 31.338 34.676 57.175 1.00 0.00 ATOM 86 CA ASP 96 30.455 35.831 57.036 1.00 0.00 ATOM 87 C ASP 96 30.734 36.594 55.752 1.00 0.00 ATOM 88 O ASP 96 30.224 37.694 55.542 1.00 0.00 ATOM 89 N ILE 97 31.542 35.998 54.885 1.00 0.00 ATOM 90 CA ILE 97 31.881 36.631 53.622 1.00 0.00 ATOM 91 C ILE 97 30.694 36.683 52.676 1.00 0.00 ATOM 92 O ILE 97 29.875 35.767 52.628 1.00 0.00 ATOM 93 N ASP 98 30.600 37.784 51.941 1.00 0.00 ATOM 94 CA ASP 98 29.557 37.955 50.949 1.00 0.00 ATOM 95 C ASP 98 30.301 38.301 49.673 1.00 0.00 ATOM 96 O ASP 98 31.107 39.234 49.646 1.00 0.00 ATOM 97 N MET 99 30.066 37.516 48.631 1.00 0.00 ATOM 98 CA MET 99 30.706 37.753 47.350 1.00 0.00 ATOM 99 C MET 99 29.639 38.154 46.347 1.00 0.00 ATOM 100 O MET 99 28.627 37.470 46.189 1.00 0.00 ATOM 101 N ALA 100 29.869 39.278 45.682 1.00 0.00 ATOM 102 CA ALA 100 28.933 39.787 44.687 1.00 0.00 ATOM 103 C ALA 100 29.656 39.969 43.363 1.00 0.00 ATOM 104 O ALA 100 30.862 40.193 43.329 1.00 0.00 ATOM 105 N GLY 101 40.154 26.661 34.462 1.00 0.00 ATOM 106 CA GLY 101 40.583 25.828 33.357 1.00 0.00 ATOM 107 C GLY 101 39.931 26.187 32.041 1.00 0.00 ATOM 108 O GLY 101 39.996 25.419 31.086 1.00 0.00 ATOM 109 N ILE 102 39.303 27.356 31.983 1.00 0.00 ATOM 110 CA ILE 102 38.647 27.778 30.754 1.00 0.00 ATOM 111 C ILE 102 39.676 28.263 29.744 1.00 0.00 ATOM 112 O ILE 102 39.644 27.865 28.577 1.00 0.00 ATOM 113 N GLY 112 40.594 29.110 30.205 1.00 0.00 ATOM 114 CA GLY 112 41.632 29.670 29.342 1.00 0.00 ATOM 115 C GLY 112 43.031 29.176 29.674 1.00 0.00 ATOM 116 O GLY 112 44.020 29.705 29.167 1.00 0.00 ATOM 117 N ASP 113 43.117 28.170 30.534 1.00 0.00 ATOM 118 CA ASP 113 44.406 27.612 30.907 1.00 0.00 ATOM 119 C ASP 113 44.214 26.208 31.459 1.00 0.00 ATOM 120 O ASP 113 43.115 25.656 31.406 1.00 0.00 ATOM 121 N PHE 114 45.290 25.630 31.974 1.00 0.00 ATOM 122 CA PHE 114 45.243 24.287 32.526 1.00 0.00 ATOM 123 C PHE 114 45.393 24.402 34.032 1.00 0.00 ATOM 124 O PHE 114 46.361 24.982 34.517 1.00 0.00 ATOM 125 N PRO 115 44.432 23.855 34.768 1.00 0.00 ATOM 126 CA PRO 115 44.476 23.925 36.222 1.00 0.00 ATOM 127 C PRO 115 44.503 22.541 36.847 1.00 0.00 ATOM 128 O PRO 115 43.727 21.663 36.476 1.00 0.00 ATOM 129 N TYR 116 45.408 22.355 37.802 1.00 0.00 ATOM 130 CA TYR 116 45.539 21.086 38.501 1.00 0.00 ATOM 131 C TYR 116 45.682 21.373 39.989 1.00 0.00 ATOM 132 O TYR 116 46.391 22.303 40.374 1.00 0.00 ATOM 133 N GLU 117 45.003 20.583 40.813 1.00 0.00 ATOM 134 CA GLU 117 45.066 20.725 42.270 1.00 0.00 ATOM 135 C GLU 117 44.535 22.079 42.698 1.00 0.00 ATOM 136 O GLU 117 45.294 22.997 43.020 1.00 0.00 ATOM 137 N ILE 118 43.216 22.186 42.732 1.00 0.00 ATOM 138 CA ILE 118 42.577 23.438 43.079 1.00 0.00 ATOM 139 C ILE 118 41.407 23.229 44.025 1.00 0.00 ATOM 140 O ILE 118 40.681 22.251 43.908 1.00 0.00 ATOM 141 N ASP 119 41.232 24.134 44.980 1.00 0.00 ATOM 142 CA ASP 119 40.082 24.022 45.861 1.00 0.00 ATOM 143 C ASP 119 39.574 25.409 46.239 1.00 0.00 ATOM 144 O ASP 119 40.335 26.378 46.279 1.00 0.00 ATOM 145 N PHE 120 38.268 25.494 46.460 1.00 0.00 ATOM 146 CA PHE 120 37.596 26.739 46.830 1.00 0.00 ATOM 147 C PHE 120 36.573 26.233 47.828 1.00 0.00 ATOM 148 O PHE 120 35.589 25.593 47.456 1.00 0.00 ATOM 149 N ASP 121 36.798 26.522 49.103 1.00 0.00 ATOM 150 CA ASP 121 35.902 26.020 50.131 1.00 0.00 ATOM 151 C ASP 121 35.567 27.016 51.226 1.00 0.00 ATOM 152 O ASP 121 36.433 27.740 51.716 1.00 0.00 ATOM 153 N GLY 122 34.297 27.043 51.609 1.00 0.00 ATOM 154 CA GLY 122 33.872 27.935 52.663 1.00 0.00 ATOM 155 C GLY 122 34.154 27.291 54.008 1.00 0.00 ATOM 156 O GLY 122 34.004 26.079 54.184 1.00 0.00 ATOM 157 N ASP 123 34.591 28.104 54.961 1.00 0.00 ATOM 158 CA ASP 123 34.852 27.631 56.308 1.00 0.00 ATOM 159 C ASP 123 33.536 27.638 57.074 1.00 0.00 ATOM 160 O ASP 123 32.583 28.316 56.685 1.00 0.00 ATOM 161 N SER 124 33.482 26.876 58.159 1.00 0.00 ATOM 162 CA SER 124 32.285 26.846 58.983 1.00 0.00 ATOM 163 C SER 124 31.010 26.465 58.259 1.00 0.00 ATOM 164 O SER 124 30.989 25.481 57.523 1.00 0.00 ATOM 165 N HIS 125 29.945 27.236 58.471 1.00 0.00 ATOM 166 CA HIS 125 28.673 26.934 57.830 1.00 0.00 ATOM 167 C HIS 125 28.549 27.517 56.428 1.00 0.00 ATOM 168 O HIS 125 27.462 27.540 55.849 1.00 0.00 ATOM 169 N ASN 129 29.664 27.990 55.884 1.00 0.00 ATOM 170 CA ASN 129 29.648 28.510 54.530 1.00 0.00 ATOM 171 C ASN 129 29.423 29.995 54.397 1.00 0.00 ATOM 172 O ASN 129 29.052 30.667 55.353 1.00 0.00 ATOM 173 N PHE 130 29.649 30.505 53.192 1.00 0.00 ATOM 174 CA PHE 130 29.485 31.924 52.940 1.00 0.00 ATOM 175 C PHE 130 28.383 32.162 51.934 1.00 0.00 ATOM 176 O PHE 130 27.700 31.235 51.506 1.00 0.00 ATOM 177 N LYS 131 28.232 33.417 51.540 1.00 0.00 ATOM 178 CA LYS 131 27.186 33.780 50.610 1.00 0.00 ATOM 179 C LYS 131 27.675 34.400 49.312 1.00 0.00 ATOM 180 O LYS 131 28.559 35.258 49.312 1.00 0.00 ATOM 181 N CYS 132 27.112 33.928 48.206 1.00 0.00 ATOM 182 CA CYS 132 27.384 34.499 46.892 1.00 0.00 ATOM 183 C CYS 132 26.037 35.163 46.646 1.00 0.00 ATOM 184 O CYS 132 25.011 34.487 46.588 1.00 0.00 ATOM 185 N SER 133 26.036 36.485 46.519 1.00 0.00 ATOM 186 CA SER 133 24.790 37.229 46.364 1.00 0.00 ATOM 187 C SER 133 24.600 37.891 44.999 1.00 0.00 ATOM 188 O SER 133 25.385 38.753 44.601 1.00 0.00 ATOM 189 N ALA 134 23.549 37.479 44.292 1.00 0.00 ATOM 190 CA ALA 134 23.226 38.038 42.979 1.00 0.00 ATOM 191 C ALA 134 21.996 38.937 43.072 1.00 0.00 ATOM 192 O ALA 134 21.588 39.531 42.074 1.00 0.00 ATOM 193 N GLY 135 21.410 39.033 44.260 1.00 0.00 ATOM 194 CA GLY 135 20.193 39.823 44.450 1.00 0.00 ATOM 195 C GLY 135 20.227 41.284 44.013 1.00 0.00 ATOM 196 O GLY 135 19.218 41.804 43.533 1.00 0.00 ATOM 197 N ASP 136 21.366 41.950 44.167 1.00 0.00 ATOM 198 CA ASP 136 21.458 43.358 43.782 1.00 0.00 ATOM 199 C ASP 136 22.176 43.583 42.454 1.00 0.00 ATOM 200 O ASP 136 22.481 44.723 42.090 1.00 0.00 ATOM 201 N TYR 137 23.214 37.609 33.130 1.00 0.00 ATOM 202 CA TYR 137 24.004 36.516 32.567 1.00 0.00 ATOM 203 C TYR 137 25.158 36.191 33.500 1.00 0.00 ATOM 204 O TYR 137 26.304 36.553 33.233 1.00 0.00 ATOM 205 N PRO 138 24.847 35.492 34.586 1.00 0.00 ATOM 206 CA PRO 138 25.847 35.155 35.591 1.00 0.00 ATOM 207 C PRO 138 25.920 33.698 36.019 1.00 0.00 ATOM 208 O PRO 138 24.903 33.054 36.250 1.00 0.00 ATOM 209 N SER 139 27.144 33.198 36.132 1.00 0.00 ATOM 210 CA SER 139 27.399 31.848 36.616 1.00 0.00 ATOM 211 C SER 139 28.443 32.071 37.704 1.00 0.00 ATOM 212 O SER 139 29.206 33.036 37.644 1.00 0.00 ATOM 213 N PHE 140 28.469 31.207 38.712 1.00 0.00 ATOM 214 CA PHE 140 29.448 31.361 39.779 1.00 0.00 ATOM 215 C PHE 140 30.784 30.765 39.339 1.00 0.00 ATOM 216 O PHE 140 31.829 31.409 39.447 1.00 0.00 ATOM 217 N PHE 141 30.740 29.536 38.838 1.00 0.00 ATOM 218 CA PHE 141 31.938 28.850 38.358 1.00 0.00 ATOM 219 C PHE 141 31.729 28.277 36.969 1.00 0.00 ATOM 220 O PHE 141 30.674 27.724 36.670 1.00 0.00 ATOM 221 N GLY 142 32.737 28.420 36.119 1.00 0.00 ATOM 222 CA GLY 142 32.703 27.797 34.808 1.00 0.00 ATOM 223 C GLY 142 33.971 26.958 34.841 1.00 0.00 ATOM 224 O GLY 142 35.075 27.491 34.976 1.00 0.00 ATOM 225 N GLY 146 36.603 24.091 33.181 1.00 0.00 ATOM 226 CA GLY 146 37.093 23.607 31.906 1.00 0.00 ATOM 227 C GLY 146 38.149 22.542 32.136 1.00 0.00 ATOM 228 O GLY 146 37.867 21.477 32.695 1.00 0.00 ATOM 229 N ASP 147 39.374 22.833 31.710 1.00 0.00 ATOM 230 CA ASP 147 40.481 21.901 31.858 1.00 0.00 ATOM 231 C ASP 147 41.062 21.969 33.267 1.00 0.00 ATOM 232 O ASP 147 42.110 22.579 33.497 1.00 0.00 ATOM 233 N CYS 148 40.365 21.338 34.204 1.00 0.00 ATOM 234 CA CYS 148 40.797 21.304 35.591 1.00 0.00 ATOM 235 C CYS 148 40.657 19.886 36.126 1.00 0.00 ATOM 236 O CYS 148 39.679 19.199 35.839 1.00 0.00 ATOM 237 N ARG 149 41.663 19.443 36.875 1.00 0.00 ATOM 238 CA ARG 149 41.653 18.106 37.463 1.00 0.00 ATOM 239 C ARG 149 42.114 18.188 38.898 1.00 0.00 ATOM 240 O ARG 149 42.972 19.009 39.235 1.00 0.00 ATOM 241 N ASN 150 41.548 17.310 39.720 1.00 0.00 ATOM 242 CA ASN 150 41.819 17.218 41.146 1.00 0.00 ATOM 243 C ASN 150 41.398 18.515 41.808 1.00 0.00 ATOM 244 O ASN 150 42.224 19.350 42.187 1.00 0.00 ATOM 245 N VAL 151 40.091 18.676 41.939 1.00 0.00 ATOM 246 CA VAL 151 39.562 19.892 42.517 1.00 0.00 ATOM 247 C VAL 151 38.417 19.657 43.473 1.00 0.00 ATOM 248 O VAL 151 37.791 18.601 43.481 1.00 0.00 ATOM 249 N GLY 152 38.153 20.668 44.286 1.00 0.00 ATOM 250 CA GLY 152 37.077 20.601 45.251 1.00 0.00 ATOM 251 C GLY 152 36.473 21.985 45.399 1.00 0.00 ATOM 252 O GLY 152 37.185 22.955 45.651 1.00 0.00 ATOM 253 N PHE 153 35.164 22.071 45.194 1.00 0.00 ATOM 254 CA PHE 153 34.417 23.323 45.326 1.00 0.00 ATOM 255 C PHE 153 33.363 22.972 46.371 1.00 0.00 ATOM 256 O PHE 153 32.582 22.040 46.189 1.00 0.00 ATOM 257 N VAL 154 33.325 23.746 47.455 1.00 0.00 ATOM 258 CA VAL 154 32.463 23.385 48.573 1.00 0.00 ATOM 259 C VAL 154 31.970 24.470 49.508 1.00 0.00 ATOM 260 O VAL 154 32.628 25.484 49.682 1.00 0.00 ATOM 261 N ASN 155 30.805 24.222 50.102 1.00 0.00 ATOM 262 CA ASN 155 30.250 25.063 51.149 1.00 0.00 ATOM 263 C ASN 155 29.905 26.546 51.032 1.00 0.00 ATOM 264 O ASN 155 30.580 27.401 51.618 1.00 0.00 ATOM 265 N ALA 156 28.823 26.843 50.326 1.00 0.00 ATOM 266 CA ALA 156 28.356 28.208 50.223 1.00 0.00 ATOM 267 C ALA 156 26.930 28.215 49.728 1.00 0.00 ATOM 268 O ALA 156 26.407 27.202 49.252 1.00 0.00 ATOM 269 N SER 157 26.291 29.358 49.911 1.00 0.00 ATOM 270 CA SER 157 24.915 29.545 49.499 1.00 0.00 ATOM 271 C SER 157 24.929 30.578 48.391 1.00 0.00 ATOM 272 O SER 157 25.715 31.525 48.423 1.00 0.00 ATOM 273 N VAL 158 24.073 30.374 47.402 1.00 0.00 ATOM 274 CA VAL 158 23.976 31.295 46.289 1.00 0.00 ATOM 275 C VAL 158 22.587 31.905 46.308 1.00 0.00 ATOM 276 O VAL 158 21.598 31.201 46.112 1.00 0.00 ATOM 277 N SER 159 22.511 33.203 46.583 1.00 0.00 ATOM 278 CA SER 159 21.236 33.905 46.575 1.00 0.00 ATOM 279 C SER 159 21.078 34.411 45.150 1.00 0.00 ATOM 280 O SER 159 21.583 35.475 44.786 1.00 0.00 ATOM 281 N SER 160 20.386 33.619 44.341 1.00 0.00 ATOM 282 CA SER 160 20.171 33.943 42.940 1.00 0.00 ATOM 283 C SER 160 19.012 34.919 42.799 1.00 0.00 ATOM 284 O SER 160 18.316 35.230 43.770 1.00 0.00 ATOM 285 N ALA 161 16.996 34.627 39.742 1.00 0.00 ATOM 286 CA ALA 161 16.549 34.048 38.487 1.00 0.00 ATOM 287 C ALA 161 17.422 34.473 37.317 1.00 0.00 ATOM 288 O ALA 161 16.928 34.873 36.264 1.00 0.00 ATOM 289 N ARG 162 18.734 34.384 37.508 1.00 0.00 ATOM 290 CA ARG 162 19.667 34.740 36.450 1.00 0.00 ATOM 291 C ARG 162 19.751 33.613 35.429 1.00 0.00 ATOM 292 O ARG 162 19.361 32.475 35.703 1.00 0.00 ATOM 293 N GLN 163 20.255 33.943 34.247 1.00 0.00 ATOM 294 CA GLN 163 20.443 32.956 33.198 1.00 0.00 ATOM 295 C GLN 163 21.674 32.154 33.619 1.00 0.00 ATOM 296 O GLN 163 22.505 32.657 34.381 1.00 0.00 ATOM 297 N GLY 164 21.771 30.916 33.139 1.00 0.00 ATOM 298 CA GLY 164 22.892 30.017 33.427 1.00 0.00 ATOM 299 C GLY 164 22.850 29.334 34.780 1.00 0.00 ATOM 300 O GLY 164 22.497 29.942 35.791 1.00 0.00 ATOM 301 N ILE 165 23.216 28.057 34.786 1.00 0.00 ATOM 302 CA ILE 165 23.289 27.307 36.027 1.00 0.00 ATOM 303 C ILE 165 24.475 27.935 36.746 1.00 0.00 ATOM 304 O ILE 165 25.367 28.497 36.110 1.00 0.00 ATOM 305 N GLY 166 24.500 27.830 38.067 1.00 0.00 ATOM 306 CA GLY 166 25.574 28.431 38.840 1.00 0.00 ATOM 307 C GLY 166 26.943 27.807 38.637 1.00 0.00 ATOM 308 O GLY 166 27.949 28.506 38.658 1.00 0.00 ATOM 309 N ILE 167 26.980 26.492 38.458 1.00 0.00 ATOM 310 CA ILE 167 28.242 25.802 38.246 1.00 0.00 ATOM 311 C ILE 167 28.162 25.072 36.918 1.00 0.00 ATOM 312 O ILE 167 27.368 24.146 36.740 1.00 0.00 ATOM 313 N ILE 168 28.986 25.512 35.978 1.00 0.00 ATOM 314 CA ILE 168 29.015 24.927 34.652 1.00 0.00 ATOM 315 C ILE 168 30.205 23.987 34.556 1.00 0.00 ATOM 316 O ILE 168 31.349 24.431 34.517 1.00 0.00 ATOM 317 N THR 169 29.927 22.686 34.548 1.00 0.00 ATOM 318 CA THR 169 30.972 21.667 34.444 1.00 0.00 ATOM 319 C THR 169 31.078 21.504 32.936 1.00 0.00 ATOM 320 O THR 169 30.564 20.553 32.347 1.00 0.00 ATOM 321 N GLY 170 31.771 22.463 32.333 1.00 0.00 ATOM 322 CA GLY 170 31.887 22.577 30.886 1.00 0.00 ATOM 323 C GLY 170 33.129 22.063 30.177 1.00 0.00 ATOM 324 O GLY 170 34.048 21.504 30.778 1.00 0.00 ATOM 325 N TYR 171 33.128 22.281 28.867 1.00 0.00 ATOM 326 CA TYR 171 34.232 21.889 28.007 1.00 0.00 ATOM 327 C TYR 171 34.871 23.165 27.474 1.00 0.00 ATOM 328 O TYR 171 34.254 24.234 27.489 1.00 0.00 ATOM 329 N LEU 172 36.118 23.054 27.033 1.00 0.00 ATOM 330 CA LEU 172 36.830 24.191 26.469 1.00 0.00 ATOM 331 C LEU 172 37.689 23.688 25.321 1.00 0.00 ATOM 332 O LEU 172 38.177 22.560 25.351 1.00 0.00 ATOM 333 N GLY 173 37.856 24.528 24.305 1.00 0.00 ATOM 334 CA GLY 173 38.648 24.171 23.137 1.00 0.00 ATOM 335 C GLY 173 40.108 24.589 23.264 1.00 0.00 ATOM 336 O GLY 173 40.413 25.708 23.684 1.00 0.00 ATOM 337 N LEU 174 41.004 23.677 22.899 1.00 0.00 ATOM 338 CA LEU 174 42.434 23.951 22.920 1.00 0.00 ATOM 339 C LEU 174 43.165 22.923 22.065 1.00 0.00 ATOM 340 O LEU 174 42.906 21.721 22.154 1.00 0.00 ATOM 341 N LYS 175 44.067 23.414 21.220 1.00 0.00 ATOM 342 CA LYS 175 44.854 22.563 20.340 1.00 0.00 ATOM 343 C LYS 175 44.021 21.647 19.445 1.00 0.00 ATOM 344 O LYS 175 44.395 20.501 19.194 1.00 0.00 ATOM 345 N ASP 176 42.885 22.155 18.977 1.00 0.00 ATOM 346 CA ASP 176 42.041 21.387 18.078 1.00 0.00 ATOM 347 C ASP 176 41.070 20.375 18.655 1.00 0.00 ATOM 348 O ASP 176 40.413 19.656 17.901 1.00 0.00 ATOM 349 N LYS 177 40.967 20.303 19.976 1.00 0.00 ATOM 350 CA LYS 177 40.043 19.356 20.588 1.00 0.00 ATOM 351 C LYS 177 39.445 19.924 21.867 1.00 0.00 ATOM 352 O LYS 177 39.827 21.008 22.311 1.00 0.00 ATOM 353 N GLY 178 38.510 19.185 22.453 1.00 0.00 ATOM 354 CA GLY 178 37.863 19.626 23.682 1.00 0.00 ATOM 355 C GLY 178 38.507 19.048 24.929 1.00 0.00 ATOM 356 O GLY 178 39.038 17.938 24.926 1.00 0.00 ATOM 357 N ASN 179 38.442 19.823 26.001 1.00 0.00 ATOM 358 CA ASN 179 38.997 19.433 27.284 1.00 0.00 ATOM 359 C ASN 179 37.943 19.729 28.333 1.00 0.00 ATOM 360 O ASN 179 37.141 20.642 28.172 1.00 0.00 ATOM 361 N GLY 180 37.935 18.948 29.403 1.00 0.00 ATOM 362 CA GLY 180 36.964 19.167 30.460 1.00 0.00 ATOM 363 C GLY 180 37.507 18.630 31.766 1.00 0.00 ATOM 364 O GLY 180 38.594 18.061 31.797 1.00 0.00 ATOM 365 N ASN 181 36.751 18.805 32.840 1.00 0.00 ATOM 366 CA ASN 181 37.240 18.394 34.147 1.00 0.00 ATOM 367 C ASN 181 37.164 16.921 34.501 1.00 0.00 ATOM 368 O ASN 181 36.339 16.163 33.983 1.00 0.00 ATOM 369 N LYS 182 38.060 16.530 35.400 1.00 0.00 ATOM 370 CA LYS 182 38.136 15.163 35.880 1.00 0.00 ATOM 371 C LYS 182 38.602 15.195 37.322 1.00 0.00 ATOM 372 O LYS 182 39.353 16.087 37.720 1.00 0.00 ATOM 373 N THR 183 38.151 14.215 38.092 1.00 0.00 ATOM 374 CA THR 183 38.560 14.063 39.481 1.00 0.00 ATOM 375 C THR 183 38.272 15.285 40.329 1.00 0.00 ATOM 376 O THR 183 39.147 16.110 40.591 1.00 0.00 ATOM 377 N GLY 184 37.030 15.394 40.763 1.00 0.00 ATOM 378 CA GLY 184 36.666 16.534 41.574 1.00 0.00 ATOM 379 C GLY 184 35.470 16.258 42.445 1.00 0.00 ATOM 380 O GLY 184 34.761 15.268 42.272 1.00 0.00 ATOM 381 N ARG 185 35.273 17.143 43.411 1.00 0.00 ATOM 382 CA ARG 185 34.150 17.058 44.324 1.00 0.00 ATOM 383 C ARG 185 33.500 18.429 44.356 1.00 0.00 ATOM 384 O ARG 185 34.175 19.435 44.553 1.00 0.00 ATOM 385 N ILE 186 32.195 18.461 44.130 1.00 0.00 ATOM 386 CA ILE 186 31.433 19.709 44.180 1.00 0.00 ATOM 387 C ILE 186 30.381 19.397 45.228 1.00 0.00 ATOM 388 O ILE 186 29.521 18.538 45.023 1.00 0.00 ATOM 389 N VAL 187 30.447 20.085 46.363 1.00 0.00 ATOM 390 CA VAL 187 29.541 19.755 47.450 1.00 0.00 ATOM 391 C VAL 187 29.120 20.876 48.364 1.00 0.00 ATOM 392 O VAL 187 29.708 21.951 48.370 1.00 0.00 ATOM 393 N ASN 188 28.091 20.593 49.157 1.00 0.00 ATOM 394 CA ASN 188 27.567 21.529 50.141 1.00 0.00 ATOM 395 C ASN 188 27.261 22.906 49.584 1.00 0.00 ATOM 396 O ASN 188 27.853 23.904 49.999 1.00 0.00 ATOM 397 N CYS 189 26.324 22.959 48.648 1.00 0.00 ATOM 398 CA CYS 189 25.935 24.220 48.056 1.00 0.00 ATOM 399 C CYS 189 24.422 24.293 48.035 1.00 0.00 ATOM 400 O CYS 189 23.742 23.306 47.763 1.00 0.00 ATOM 401 N TYR 190 23.902 25.468 48.363 1.00 0.00 ATOM 402 CA TYR 190 22.469 25.700 48.361 1.00 0.00 ATOM 403 C TYR 190 22.246 26.904 47.473 1.00 0.00 ATOM 404 O TYR 190 22.946 27.907 47.601 1.00 0.00 ATOM 405 N THR 191 21.294 26.796 46.555 1.00 0.00 ATOM 406 CA THR 191 20.976 27.904 45.670 1.00 0.00 ATOM 407 C THR 191 19.533 28.317 45.890 1.00 0.00 ATOM 408 O THR 191 18.630 27.480 45.876 1.00 0.00 ATOM 409 N THR 192 19.324 29.609 46.113 1.00 0.00 ATOM 410 CA THR 192 17.978 30.123 46.320 1.00 0.00 ATOM 411 C THR 192 17.506 30.908 45.111 1.00 0.00 ATOM 412 O THR 192 18.290 31.585 44.445 1.00 0.00 ATOM 413 N GLY 193 16.214 30.795 44.834 1.00 0.00 ATOM 414 CA GLY 193 15.563 31.510 43.744 1.00 0.00 ATOM 415 C GLY 193 16.211 31.379 42.367 1.00 0.00 ATOM 416 O GLY 193 16.565 32.373 41.732 1.00 0.00 ATOM 417 N GLU 194 16.346 30.144 41.899 1.00 0.00 ATOM 418 CA GLU 194 16.924 29.882 40.585 1.00 0.00 ATOM 419 C GLU 194 15.840 29.969 39.512 1.00 0.00 ATOM 420 O GLU 194 14.658 29.738 39.789 1.00 0.00 ATOM 421 N VAL 195 16.245 30.308 38.294 1.00 0.00 ATOM 422 CA VAL 195 15.317 30.387 37.170 1.00 0.00 ATOM 423 C VAL 195 15.023 28.951 36.743 1.00 0.00 ATOM 424 O VAL 195 15.915 28.101 36.756 1.00 0.00 ATOM 425 N ILE 196 13.783 28.680 36.352 1.00 0.00 ATOM 426 CA ILE 196 13.385 27.327 35.974 1.00 0.00 ATOM 427 C ILE 196 14.266 26.619 34.951 1.00 0.00 ATOM 428 O ILE 196 14.462 25.409 35.040 1.00 0.00 ATOM 429 N GLY 197 14.787 27.365 33.985 1.00 0.00 ATOM 430 CA GLY 197 15.606 26.759 32.950 1.00 0.00 ATOM 431 C GLY 197 17.026 26.448 33.368 1.00 0.00 ATOM 432 O GLY 197 17.802 25.902 32.582 1.00 0.00 ATOM 433 N SER 198 17.368 26.775 34.604 1.00 0.00 ATOM 434 CA SER 198 18.718 26.533 35.063 1.00 0.00 ATOM 435 C SER 198 18.782 25.850 36.413 1.00 0.00 ATOM 436 O SER 198 18.132 24.832 36.615 1.00 0.00 ATOM 437 N GLY 199 19.565 26.394 37.333 1.00 0.00 ATOM 438 CA GLY 199 19.680 25.761 38.628 1.00 0.00 ATOM 439 C GLY 199 21.108 25.772 39.124 1.00 0.00 ATOM 440 O GLY 199 21.913 26.612 38.731 1.00 0.00 END ########################## # # # ACE results: # # # ########################## # WARNING! TARGET 2467 atoms, MODEL 2089 atoms, 1780 common with TARGET Number of atoms possible to evaluate: 860 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 81.05 43.6 296 44.0 673 ARMSMC SECONDARY STRUCTURE . . 82.75 37.6 141 51.8 272 ARMSMC SURFACE . . . . . . . . 77.94 50.0 130 43.9 296 ARMSMC BURIED . . . . . . . . 83.41 38.6 166 44.0 377 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 197 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 180 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 69 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 96 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 101 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 95 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 83 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 30 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 45 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 50 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 21 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 18 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 7 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 4 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 16.49 (Number of atoms: 215) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 16.49 215 63.4 339 CRMSCA CRN = ALL/NP . . . . . 0.0767 CRMSCA SECONDARY STRUCTURE . . 16.03 96 70.6 136 CRMSCA SURFACE . . . . . . . . 18.18 90 60.0 150 CRMSCA BURIED . . . . . . . . 15.16 125 66.1 189 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 16.44 860 52.4 1642 CRMSMC SECONDARY STRUCTURE . . 16.03 384 58.2 660 CRMSMC SURFACE . . . . . . . . 18.00 360 49.0 734 CRMSMC BURIED . . . . . . . . 15.23 500 55.1 908 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 1111 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 969 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 451 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 512 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 599 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 16.44 860 34.9 2467 CRMSALL SECONDARY STRUCTURE . . 16.03 384 38.6 995 CRMSALL SURFACE . . . . . . . . 18.00 360 32.4 1112 CRMSALL BURIED . . . . . . . . 15.23 500 36.9 1355 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.235 1.000 0.500 215 63.4 339 ERRCA SECONDARY STRUCTURE . . 14.708 1.000 0.500 96 70.6 136 ERRCA SURFACE . . . . . . . . 17.138 1.000 0.500 90 60.0 150 ERRCA BURIED . . . . . . . . 13.864 1.000 0.500 125 66.1 189 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.202 1.000 0.500 860 52.4 1642 ERRMC SECONDARY STRUCTURE . . 14.739 1.000 0.500 384 58.2 660 ERRMC SURFACE . . . . . . . . 16.951 1.000 0.500 360 49.0 734 ERRMC BURIED . . . . . . . . 13.944 1.000 0.500 500 55.1 908 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 1111 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 969 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 451 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 512 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 599 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.202 1.000 0.500 860 34.9 2467 ERRALL SECONDARY STRUCTURE . . 14.739 1.000 0.500 384 38.6 995 ERRALL SURFACE . . . . . . . . 16.951 1.000 0.500 360 32.4 1112 ERRALL BURIED . . . . . . . . 13.944 1.000 0.500 500 36.9 1355 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 2 11 46 215 339 DISTCA CA (P) 0.00 0.00 0.59 3.24 13.57 339 DISTCA CA (RMS) 0.00 0.00 2.40 3.61 7.20 DISTCA ALL (N) 0 1 5 47 187 860 2467 DISTALL ALL (P) 0.00 0.04 0.20 1.91 7.58 2467 DISTALL ALL (RMS) 0.00 1.32 2.20 3.93 7.20 DISTALL END of the results output END of the results output