####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 45 ( 314), selected 45 , name T0534TS481_1_3-D2 # Molecule2: number of CA atoms 176 ( 1347), selected 45 , name T0534-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0534TS481_1_3-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 212 - 246 4.68 9.83 LONGEST_CONTINUOUS_SEGMENT: 35 213 - 247 4.79 9.23 LONGEST_CONTINUOUS_SEGMENT: 35 214 - 248 4.92 8.84 LCS_AVERAGE: 19.28 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 214 - 239 1.91 9.86 LCS_AVERAGE: 11.68 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 214 - 230 0.77 9.21 LCS_AVERAGE: 7.05 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 45 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT N 212 N 212 3 4 35 3 3 4 4 4 4 4 7 10 12 15 19 19 22 25 28 29 32 33 33 LCS_GDT E 213 E 213 3 19 35 3 3 4 4 5 7 10 16 29 30 31 31 32 32 32 32 32 32 34 35 LCS_GDT T 214 T 214 17 26 35 3 5 13 19 23 26 26 29 29 30 31 31 32 32 32 32 32 34 38 39 LCS_GDT V 215 V 215 17 26 35 7 15 17 18 22 26 26 29 29 30 31 31 32 32 32 32 32 34 38 39 LCS_GDT A 216 A 216 17 26 35 3 13 17 19 23 26 26 29 29 30 31 31 32 32 32 32 32 34 38 39 LCS_GDT A 217 A 217 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 32 34 38 39 LCS_GDT M 218 M 218 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 32 35 38 39 LCS_GDT D 219 D 219 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 32 35 38 39 LCS_GDT A 220 A 220 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 32 35 38 39 LCS_GDT C 221 C 221 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 33 35 38 39 LCS_GDT A 222 A 222 17 26 35 7 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT E 223 E 223 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 33 35 38 39 LCS_GDT L 224 L 224 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT E 225 E 225 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT S 226 S 226 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT I 227 I 227 17 26 35 5 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT L 228 L 228 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT K 229 K 229 17 26 35 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT N 230 N 230 17 26 35 4 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT D 231 D 231 13 26 35 5 8 12 18 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT L 232 L 232 10 26 35 5 8 11 18 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT K 233 K 233 10 26 35 5 8 11 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT S 234 S 234 10 26 35 4 8 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT Y 235 Y 235 10 26 35 5 8 11 18 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT I 236 I 236 10 26 35 4 8 11 16 22 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT A 237 A 237 10 26 35 5 8 11 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT N 238 N 238 10 26 35 4 8 12 18 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT N 239 N 239 10 26 35 3 7 10 18 22 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT S 240 S 240 10 21 35 3 4 8 12 16 22 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT N 241 N 241 4 15 35 3 4 5 12 16 21 24 26 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT N 242 N 242 4 13 35 3 4 5 10 13 19 23 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT I 243 I 243 4 8 35 3 4 5 12 18 23 26 29 29 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT N 244 N 244 4 13 35 3 4 5 10 11 16 20 25 28 30 31 31 32 32 32 32 34 35 38 39 LCS_GDT T 245 T 245 12 13 35 5 7 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 38 39 LCS_GDT D 246 D 246 12 13 35 5 10 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 37 39 LCS_GDT A 247 A 247 12 13 35 5 6 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 38 39 LCS_GDT V 248 V 248 12 13 35 5 10 12 12 12 13 18 20 23 24 24 26 28 29 31 32 34 35 38 39 LCS_GDT L 249 L 249 12 13 29 8 10 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 38 39 LCS_GDT N 250 N 250 12 13 29 8 10 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 38 39 LCS_GDT P 251 P 251 12 13 29 8 10 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 38 39 LCS_GDT V 252 V 252 12 13 29 8 10 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 38 39 LCS_GDT V 253 V 253 12 13 29 8 10 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 37 39 LCS_GDT T 254 T 254 12 13 29 8 10 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 37 38 LCS_GDT Q 255 Q 255 12 13 29 8 10 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 36 38 LCS_GDT Y 256 Y 256 12 13 29 8 10 12 12 12 16 18 20 23 24 24 26 28 29 31 32 34 35 36 38 LCS_AVERAGE LCS_A: 12.67 ( 7.05 11.68 19.28 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 15 17 19 23 26 26 29 29 30 31 31 32 32 32 32 34 35 38 39 GDT PERCENT_AT 6.25 8.52 9.66 10.80 13.07 14.77 14.77 16.48 16.48 17.05 17.61 17.61 18.18 18.18 18.18 18.18 19.32 19.89 21.59 22.16 GDT RMS_LOCAL 0.38 0.60 0.80 1.27 1.72 1.91 1.91 2.43 2.43 2.61 2.84 2.82 3.05 3.05 3.05 3.05 6.02 6.18 6.01 6.17 GDT RMS_ALL_AT 9.29 9.28 9.19 9.20 9.62 9.86 9.86 10.10 10.10 10.47 10.79 10.13 10.43 10.43 10.43 10.43 11.09 10.53 7.94 7.94 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA N 212 N 212 12.033 3 0.189 0.198 14.702 0.000 0.000 LGA E 213 E 213 7.605 4 0.079 0.082 8.860 12.143 6.878 LGA T 214 T 214 2.220 2 0.581 0.582 3.933 53.810 37.891 LGA V 215 V 215 3.344 2 0.273 0.282 4.391 61.190 40.272 LGA A 216 A 216 1.875 0 0.032 0.034 2.324 77.381 74.857 LGA A 217 A 217 1.407 0 0.027 0.025 2.411 81.548 78.190 LGA M 218 M 218 2.193 3 0.019 0.019 3.002 72.976 42.738 LGA D 219 D 219 1.538 3 0.029 0.029 2.285 79.286 47.738 LGA A 220 A 220 1.649 0 0.011 0.016 2.279 75.238 74.762 LGA C 221 C 221 2.008 1 0.015 0.070 2.348 70.833 58.016 LGA A 222 A 222 0.520 0 0.016 0.016 0.838 95.238 94.286 LGA E 223 E 223 1.647 4 0.031 0.038 2.302 75.238 40.635 LGA L 224 L 224 2.754 3 0.013 0.015 3.398 60.952 36.726 LGA E 225 E 225 1.821 4 0.046 0.044 2.208 81.667 43.492 LGA S 226 S 226 0.989 1 0.022 0.023 1.717 86.190 69.603 LGA I 227 I 227 2.792 3 0.061 0.073 3.495 57.262 34.881 LGA L 228 L 228 2.792 3 0.062 0.072 3.301 62.857 37.679 LGA K 229 K 229 1.502 4 0.057 0.056 1.662 75.000 42.381 LGA N 230 N 230 0.557 3 0.208 0.226 1.218 88.214 55.417 LGA D 231 D 231 1.171 3 0.045 0.042 1.467 83.690 52.024 LGA L 232 L 232 2.259 3 0.068 0.073 2.723 64.881 39.583 LGA K 233 K 233 2.767 4 0.054 0.062 3.137 60.952 32.646 LGA S 234 S 234 1.654 1 0.068 0.075 1.795 75.000 62.143 LGA Y 235 Y 235 2.024 7 0.120 0.128 2.398 66.786 27.659 LGA I 236 I 236 3.379 3 0.025 0.030 4.191 51.786 30.536 LGA A 237 A 237 2.965 0 0.096 0.105 3.394 60.952 58.762 LGA N 238 N 238 1.608 3 0.218 0.286 2.857 68.929 43.571 LGA N 239 N 239 1.455 3 0.205 0.206 2.492 73.095 45.655 LGA S 240 S 240 4.592 1 0.648 0.585 6.764 30.238 23.730 LGA N 241 N 241 6.182 3 0.115 0.122 7.803 22.738 12.262 LGA N 242 N 242 4.749 3 0.308 0.306 5.127 32.976 20.417 LGA I 243 I 243 3.622 3 0.514 0.487 3.915 48.452 31.369 LGA N 244 N 244 6.614 3 0.672 0.631 10.380 8.333 4.762 LGA T 245 T 245 11.968 2 0.595 0.595 13.299 0.357 0.204 LGA D 246 D 246 14.877 3 0.019 0.019 15.911 0.000 0.000 LGA A 247 A 247 14.944 0 0.022 0.021 15.479 0.000 0.000 LGA V 248 V 248 12.936 2 0.048 0.056 14.503 0.000 0.000 LGA L 249 L 249 13.933 3 0.123 0.144 16.340 0.000 0.000 LGA N 250 N 250 17.954 3 0.054 0.055 19.859 0.000 0.000 LGA P 251 P 251 19.007 2 0.097 0.101 20.458 0.000 0.000 LGA V 252 V 252 17.893 2 0.019 0.022 20.045 0.000 0.000 LGA V 253 V 253 20.273 2 0.044 0.053 23.196 0.000 0.000 LGA T 254 T 254 24.251 2 0.047 0.069 26.561 0.000 0.000 LGA Q 255 Q 255 24.787 4 0.007 0.012 26.458 0.000 0.000 LGA Y 256 Y 256 23.868 7 0.051 0.061 26.530 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 45 180 180 100.00 340 225 66.18 176 SUMMARY(RMSD_GDC): 7.537 7.456 7.591 11.456 7.965 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 45 176 4.0 29 2.43 13.494 13.680 1.146 LGA_LOCAL RMSD: 2.430 Number of atoms: 29 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.102 Number of assigned atoms: 45 Std_ASGN_ATOMS RMSD: 7.537 Standard rmsd on all 45 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.874297 * X + 0.202509 * Y + -0.441129 * Z + -14.826009 Y_new = 0.090886 * X + 0.824438 * Y + 0.558607 * Z + 16.122644 Z_new = 0.476806 * X + -0.528480 * Y + 0.702399 * Z + 68.810257 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.103581 -0.497018 -0.645031 [DEG: 5.9348 -28.4770 -36.9576 ] ZXZ: -2.473167 0.792034 2.407552 [DEG: -141.7020 45.3802 137.9425 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0534TS481_1_3-D2 REMARK 2: T0534-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0534TS481_1_3-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 45 176 4.0 29 2.43 13.680 7.54 REMARK ---------------------------------------------------------- MOLECULE T0534TS481_1_3-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 3 REMARK PFRMAT TS REMARK TARGET T0534 REMARK PARENT N/A ATOM 1460 N ASN 212 -14.826 16.123 68.810 1.00 0.00 N ATOM 1461 CA ASN 212 -13.551 16.255 69.505 1.00 0.00 C ATOM 1462 C ASN 212 -12.782 17.476 69.018 1.00 0.00 C ATOM 1463 O ASN 212 -11.670 17.743 69.471 1.00 0.00 O ATOM 1464 CB ASN 212 -12.704 15.006 69.353 1.00 0.00 C ATOM 1465 CEN ASN 212 -12.532 14.109 69.871 1.00 0.00 C ATOM 1466 H ASN 212 -15.020 15.301 68.274 1.00 0.00 H ATOM 1467 N GLU 213 -13.381 18.215 68.090 1.00 0.00 N ATOM 1468 CA GLU 213 -12.733 19.382 67.504 1.00 0.00 C ATOM 1469 C GLU 213 -12.738 20.559 68.471 1.00 0.00 C ATOM 1470 O GLU 213 -11.887 21.445 68.390 1.00 0.00 O ATOM 1471 CB GLU 213 -13.421 19.775 66.194 1.00 0.00 C ATOM 1472 CEN GLU 213 -13.478 19.753 64.492 1.00 0.00 C ATOM 1473 H GLU 213 -14.310 17.962 67.784 1.00 0.00 H ATOM 1474 N THR 214 -13.701 20.562 69.386 1.00 0.00 N ATOM 1475 CA THR 214 -13.797 21.613 70.394 1.00 0.00 C ATOM 1476 C THR 214 -14.399 21.082 71.688 1.00 0.00 C ATOM 1477 O THR 214 -15.252 20.193 71.668 1.00 0.00 O ATOM 1478 CB THR 214 -14.642 22.799 69.895 1.00 0.00 C ATOM 1479 CEN THR 214 -14.747 23.231 69.517 1.00 0.00 C ATOM 1480 H THR 214 -14.384 19.819 69.385 1.00 0.00 H ATOM 1481 N VAL 215 -13.952 21.629 72.812 1.00 0.00 N ATOM 1482 CA VAL 215 -14.466 21.230 74.116 1.00 0.00 C ATOM 1483 C VAL 215 -15.655 22.089 74.527 1.00 0.00 C ATOM 1484 O VAL 215 -16.165 21.969 75.640 1.00 0.00 O ATOM 1485 CB VAL 215 -13.380 21.322 75.205 1.00 0.00 C ATOM 1486 CEN VAL 215 -12.974 20.947 75.616 1.00 0.00 C ATOM 1487 H VAL 215 -13.237 22.341 72.762 1.00 0.00 H ATOM 1488 N ALA 216 -16.092 22.957 73.621 1.00 0.00 N ATOM 1489 CA ALA 216 -17.217 23.845 73.889 1.00 0.00 C ATOM 1490 C ALA 216 -18.501 23.056 74.109 1.00 0.00 C ATOM 1491 O ALA 216 -19.273 23.349 75.021 1.00 0.00 O ATOM 1492 CB ALA 216 -17.390 24.840 72.752 1.00 0.00 C ATOM 1493 CEN ALA 216 -17.390 24.839 72.752 1.00 0.00 C ATOM 1494 H ALA 216 -15.634 23.002 72.721 1.00 0.00 H ATOM 1495 N ALA 217 -18.725 22.052 73.266 1.00 0.00 N ATOM 1496 CA ALA 217 -19.891 21.189 73.397 1.00 0.00 C ATOM 1497 C ALA 217 -19.713 20.188 74.532 1.00 0.00 C ATOM 1498 O ALA 217 -20.652 19.902 75.274 1.00 0.00 O ATOM 1499 CB ALA 217 -20.163 20.465 72.086 1.00 0.00 C ATOM 1500 CEN ALA 217 -20.164 20.465 72.087 1.00 0.00 C ATOM 1501 H ALA 217 -18.069 21.884 72.517 1.00 0.00 H ATOM 1502 N MET 218 -18.500 19.659 74.662 1.00 0.00 N ATOM 1503 CA MET 218 -18.201 18.673 75.692 1.00 0.00 C ATOM 1504 C MET 218 -18.521 19.213 77.080 1.00 0.00 C ATOM 1505 O MET 218 -19.122 18.522 77.903 1.00 0.00 O ATOM 1506 CB MET 218 -16.735 18.253 75.612 1.00 0.00 C ATOM 1507 CEN MET 218 -15.690 16.913 75.178 1.00 0.00 C ATOM 1508 H MET 218 -17.768 19.948 74.029 1.00 0.00 H ATOM 1509 N ASP 219 -18.114 20.452 77.336 1.00 0.00 N ATOM 1510 CA ASP 219 -18.350 21.086 78.627 1.00 0.00 C ATOM 1511 C ASP 219 -19.839 21.267 78.887 1.00 0.00 C ATOM 1512 O ASP 219 -20.318 21.039 79.997 1.00 0.00 O ATOM 1513 CB ASP 219 -17.635 22.437 78.701 1.00 0.00 C ATOM 1514 CEN ASP 219 -16.775 22.850 79.057 1.00 0.00 C ATOM 1515 H ASP 219 -17.627 20.968 76.616 1.00 0.00 H ATOM 1516 N ALA 220 -20.569 21.680 77.855 1.00 0.00 N ATOM 1517 CA ALA 220 -22.012 21.861 77.960 1.00 0.00 C ATOM 1518 C ALA 220 -22.706 20.554 78.324 1.00 0.00 C ATOM 1519 O ALA 220 -23.621 20.534 79.147 1.00 0.00 O ATOM 1520 CB ALA 220 -22.572 22.418 76.660 1.00 0.00 C ATOM 1521 CEN ALA 220 -22.572 22.418 76.661 1.00 0.00 C ATOM 1522 H ALA 220 -20.112 21.874 76.976 1.00 0.00 H ATOM 1523 N CYS 221 -22.263 19.464 77.707 1.00 0.00 N ATOM 1524 CA CYS 221 -22.834 18.149 77.972 1.00 0.00 C ATOM 1525 C CYS 221 -22.559 17.707 79.403 1.00 0.00 C ATOM 1526 O CYS 221 -23.408 17.091 80.048 1.00 0.00 O ATOM 1527 CB CYS 221 -22.094 17.253 76.979 1.00 0.00 C ATOM 1528 CEN CYS 221 -22.433 16.791 76.128 1.00 0.00 C ATOM 1529 H CYS 221 -21.512 19.548 77.036 1.00 0.00 H ATOM 1530 N ALA 222 -21.366 18.023 79.895 1.00 0.00 N ATOM 1531 CA ALA 222 -20.955 17.611 81.232 1.00 0.00 C ATOM 1532 C ALA 222 -21.963 18.060 82.281 1.00 0.00 C ATOM 1533 O ALA 222 -22.303 17.307 83.193 1.00 0.00 O ATOM 1534 CB ALA 222 -19.572 18.159 81.554 1.00 0.00 C ATOM 1535 CEN ALA 222 -19.573 18.159 81.553 1.00 0.00 C ATOM 1536 H ALA 222 -20.726 18.562 79.328 1.00 0.00 H ATOM 1537 N GLU 223 -22.440 19.294 82.147 1.00 0.00 N ATOM 1538 CA GLU 223 -23.421 19.842 83.075 1.00 0.00 C ATOM 1539 C GLU 223 -24.741 19.087 82.991 1.00 0.00 C ATOM 1540 O GLU 223 -25.313 18.700 84.010 1.00 0.00 O ATOM 1541 CB GLU 223 -23.647 21.329 82.800 1.00 0.00 C ATOM 1542 CEN GLU 223 -23.338 22.964 83.170 1.00 0.00 C ATOM 1543 H GLU 223 -22.114 19.866 81.381 1.00 0.00 H ATOM 1544 N LEU 224 -25.221 18.880 81.769 1.00 0.00 N ATOM 1545 CA LEU 224 -26.481 18.179 81.549 1.00 0.00 C ATOM 1546 C LEU 224 -26.399 16.735 82.029 1.00 0.00 C ATOM 1547 O LEU 224 -27.299 16.247 82.711 1.00 0.00 O ATOM 1548 CB LEU 224 -26.863 18.229 80.065 1.00 0.00 C ATOM 1549 CEN LEU 224 -27.901 19.052 79.278 1.00 0.00 C ATOM 1550 H LEU 224 -24.700 19.217 80.972 1.00 0.00 H ATOM 1551 N GLU 225 -25.315 16.058 81.666 1.00 0.00 N ATOM 1552 CA GLU 225 -25.117 14.668 82.055 1.00 0.00 C ATOM 1553 C GLU 225 -25.049 14.524 83.570 1.00 0.00 C ATOM 1554 O GLU 225 -25.600 13.579 84.138 1.00 0.00 O ATOM 1555 CB GLU 225 -23.842 14.110 81.418 1.00 0.00 C ATOM 1556 CEN GLU 225 -23.077 13.204 80.194 1.00 0.00 C ATOM 1557 H GLU 225 -24.612 16.518 81.107 1.00 0.00 H ATOM 1558 N SER 226 -24.374 15.464 84.220 1.00 0.00 N ATOM 1559 CA SER 226 -24.224 15.438 85.671 1.00 0.00 C ATOM 1560 C SER 226 -25.564 15.643 86.366 1.00 0.00 C ATOM 1561 O SER 226 -25.882 14.955 87.336 1.00 0.00 O ATOM 1562 CB SER 226 -23.232 16.496 86.112 1.00 0.00 C ATOM 1563 CEN SER 226 -22.962 16.968 86.119 1.00 0.00 C ATOM 1564 H SER 226 -23.952 16.218 83.696 1.00 0.00 H ATOM 1565 N ILE 227 -26.346 16.593 85.864 1.00 0.00 N ATOM 1566 CA ILE 227 -27.651 16.894 86.441 1.00 0.00 C ATOM 1567 C ILE 227 -28.646 15.774 86.169 1.00 0.00 C ATOM 1568 O ILE 227 -29.435 15.406 87.039 1.00 0.00 O ATOM 1569 CB ILE 227 -28.218 18.217 85.894 1.00 0.00 C ATOM 1570 CEN ILE 227 -28.232 19.300 86.015 1.00 0.00 C ATOM 1571 H ILE 227 -26.029 17.120 85.063 1.00 0.00 H ATOM 1572 N LEU 228 -28.605 15.233 84.956 1.00 0.00 N ATOM 1573 CA LEU 228 -29.543 14.195 84.546 1.00 0.00 C ATOM 1574 C LEU 228 -29.375 12.938 85.389 1.00 0.00 C ATOM 1575 O LEU 228 -30.356 12.346 85.839 1.00 0.00 O ATOM 1576 CB LEU 228 -29.357 13.870 83.059 1.00 0.00 C ATOM 1577 CEN LEU 228 -30.168 14.230 81.800 1.00 0.00 C ATOM 1578 H LEU 228 -27.904 15.551 84.301 1.00 0.00 H ATOM 1579 N LYS 229 -28.127 12.534 85.600 1.00 0.00 N ATOM 1580 CA LYS 229 -27.829 11.354 86.401 1.00 0.00 C ATOM 1581 C LYS 229 -28.388 11.490 87.812 1.00 0.00 C ATOM 1582 O LYS 229 -29.052 10.585 88.316 1.00 0.00 O ATOM 1583 CB LYS 229 -26.319 11.110 86.455 1.00 0.00 C ATOM 1584 CEN LYS 229 -24.641 10.002 85.799 1.00 0.00 C ATOM 1585 H LYS 229 -27.366 13.059 85.194 1.00 0.00 H ATOM 1586 N ASN 230 -28.114 12.626 88.444 1.00 0.00 N ATOM 1587 CA ASN 230 -28.580 12.878 89.802 1.00 0.00 C ATOM 1588 C ASN 230 -30.102 12.864 89.875 1.00 0.00 C ATOM 1589 O ASN 230 -30.682 12.361 90.837 1.00 0.00 O ATOM 1590 CB ASN 230 -28.041 14.192 90.340 1.00 0.00 C ATOM 1591 CEN ASN 230 -27.219 14.530 90.896 1.00 0.00 C ATOM 1592 H ASN 230 -27.570 13.333 87.971 1.00 0.00 H ATOM 1593 N ASP 231 -30.743 13.419 88.852 1.00 0.00 N ATOM 1594 CA ASP 231 -32.199 13.453 88.788 1.00 0.00 C ATOM 1595 C ASP 231 -32.779 12.050 88.681 1.00 0.00 C ATOM 1596 O ASP 231 -33.763 11.721 89.346 1.00 0.00 O ATOM 1597 CB ASP 231 -32.664 14.306 87.606 1.00 0.00 C ATOM 1598 CEN ASP 231 -32.988 15.250 87.398 1.00 0.00 C ATOM 1599 H ASP 231 -30.207 13.826 88.098 1.00 0.00 H ATOM 1600 N LEU 232 -32.165 11.223 87.841 1.00 0.00 N ATOM 1601 CA LEU 232 -32.614 9.849 87.654 1.00 0.00 C ATOM 1602 C LEU 232 -32.462 9.040 88.936 1.00 0.00 C ATOM 1603 O LEU 232 -33.320 8.223 89.271 1.00 0.00 O ATOM 1604 CB LEU 232 -31.833 9.187 86.511 1.00 0.00 C ATOM 1605 CEN LEU 232 -32.200 8.847 85.054 1.00 0.00 C ATOM 1606 H LEU 232 -31.368 11.556 87.318 1.00 0.00 H ATOM 1607 N LYS 233 -31.367 9.274 89.651 1.00 0.00 N ATOM 1608 CA LYS 233 -31.136 8.623 90.935 1.00 0.00 C ATOM 1609 C LYS 233 -32.216 8.997 91.943 1.00 0.00 C ATOM 1610 O LYS 233 -32.636 8.170 92.752 1.00 0.00 O ATOM 1611 CB LYS 233 -29.756 8.991 91.483 1.00 0.00 C ATOM 1612 CEN LYS 233 -27.747 8.439 91.842 1.00 0.00 C ATOM 1613 H LYS 233 -30.676 9.918 89.295 1.00 0.00 H ATOM 1614 N SER 234 -32.662 10.247 91.888 1.00 0.00 N ATOM 1615 CA SER 234 -33.675 10.741 92.813 1.00 0.00 C ATOM 1616 C SER 234 -35.003 10.022 92.611 1.00 0.00 C ATOM 1617 O SER 234 -35.615 9.547 93.568 1.00 0.00 O ATOM 1618 CB SER 234 -33.853 12.237 92.643 1.00 0.00 C ATOM 1619 CEN SER 234 -33.880 12.720 92.395 1.00 0.00 C ATOM 1620 H SER 234 -32.290 10.873 91.188 1.00 0.00 H ATOM 1621 N TYR 235 -35.443 9.944 91.360 1.00 0.00 N ATOM 1622 CA TYR 235 -36.721 9.323 91.034 1.00 0.00 C ATOM 1623 C TYR 235 -36.655 7.809 91.198 1.00 0.00 C ATOM 1624 O TYR 235 -37.676 7.154 91.412 1.00 0.00 O ATOM 1625 CB TYR 235 -37.141 9.678 89.606 1.00 0.00 C ATOM 1626 CEN TYR 235 -38.203 10.775 88.748 1.00 0.00 C ATOM 1627 H TYR 235 -34.877 10.325 90.614 1.00 0.00 H ATOM 1628 N ILE 236 -35.451 7.261 91.097 1.00 0.00 N ATOM 1629 CA ILE 236 -35.241 5.830 91.290 1.00 0.00 C ATOM 1630 C ILE 236 -35.548 5.417 92.724 1.00 0.00 C ATOM 1631 O ILE 236 -36.187 4.392 92.961 1.00 0.00 O ATOM 1632 CB ILE 236 -33.798 5.418 90.945 1.00 0.00 C ATOM 1633 CEN ILE 236 -33.124 5.119 90.143 1.00 0.00 C ATOM 1634 H ILE 236 -34.658 7.848 90.881 1.00 0.00 H ATOM 1635 N ALA 237 -35.089 6.221 93.678 1.00 0.00 N ATOM 1636 CA ALA 237 -35.283 5.921 95.091 1.00 0.00 C ATOM 1637 C ALA 237 -36.759 5.967 95.466 1.00 0.00 C ATOM 1638 O ALA 237 -37.231 5.158 96.265 1.00 0.00 O ATOM 1639 CB ALA 237 -34.483 6.888 95.952 1.00 0.00 C ATOM 1640 CEN ALA 237 -34.484 6.888 95.951 1.00 0.00 C ATOM 1641 H ALA 237 -34.592 7.060 93.416 1.00 0.00 H ATOM 1642 N ASN 238 -37.482 6.918 94.886 1.00 0.00 N ATOM 1643 CA ASN 238 -38.918 7.033 95.111 1.00 0.00 C ATOM 1644 C ASN 238 -39.659 5.812 94.582 1.00 0.00 C ATOM 1645 O ASN 238 -39.116 5.037 93.795 1.00 0.00 O ATOM 1646 CB ASN 238 -39.478 8.298 94.488 1.00 0.00 C ATOM 1647 CEN ASN 238 -39.673 9.291 94.771 1.00 0.00 C ATOM 1648 H ASN 238 -37.026 7.578 94.272 1.00 0.00 H ATOM 1649 N ASN 239 -40.903 5.647 95.018 1.00 0.00 N ATOM 1650 CA ASN 239 -41.711 4.503 94.614 1.00 0.00 C ATOM 1651 C ASN 239 -42.454 4.784 93.314 1.00 0.00 C ATOM 1652 O ASN 239 -43.273 3.979 92.869 1.00 0.00 O ATOM 1653 CB ASN 239 -42.689 4.102 95.702 1.00 0.00 C ATOM 1654 CEN ASN 239 -42.726 3.440 96.515 1.00 0.00 C ATOM 1655 H ASN 239 -41.300 6.332 95.645 1.00 0.00 H ATOM 1656 N SER 240 -42.165 5.931 92.710 1.00 0.00 N ATOM 1657 CA SER 240 -42.779 6.305 91.442 1.00 0.00 C ATOM 1658 C SER 240 -42.450 5.294 90.351 1.00 0.00 C ATOM 1659 O SER 240 -41.285 4.965 90.129 1.00 0.00 O ATOM 1660 CB SER 240 -42.326 7.693 91.031 1.00 0.00 C ATOM 1661 CEN SER 240 -41.999 8.123 90.970 1.00 0.00 C ATOM 1662 H SER 240 -41.503 6.562 93.141 1.00 0.00 H ATOM 1663 N ASN 241 -43.482 4.805 89.673 1.00 0.00 N ATOM 1664 CA ASN 241 -43.301 3.849 88.587 1.00 0.00 C ATOM 1665 C ASN 241 -43.655 4.471 87.242 1.00 0.00 C ATOM 1666 O ASN 241 -43.101 4.097 86.209 1.00 0.00 O ATOM 1667 CB ASN 241 -44.118 2.590 88.813 1.00 0.00 C ATOM 1668 CEN ASN 241 -43.990 1.642 89.246 1.00 0.00 C ATOM 1669 H ASN 241 -44.416 5.102 89.917 1.00 0.00 H ATOM 1670 N ASN 242 -44.583 5.423 87.262 1.00 0.00 N ATOM 1671 CA ASN 242 -44.963 6.148 86.055 1.00 0.00 C ATOM 1672 C ASN 242 -43.748 6.782 85.388 1.00 0.00 C ATOM 1673 O ASN 242 -43.695 6.907 84.165 1.00 0.00 O ATOM 1674 CB ASN 242 -46.011 7.204 86.349 1.00 0.00 C ATOM 1675 CEN ASN 242 -47.057 7.289 86.349 1.00 0.00 C ATOM 1676 H ASN 242 -45.037 5.650 88.135 1.00 0.00 H ATOM 1677 N ILE 243 -42.776 7.182 86.201 1.00 0.00 N ATOM 1678 CA ILE 243 -41.615 7.911 85.704 1.00 0.00 C ATOM 1679 C ILE 243 -40.441 6.974 85.452 1.00 0.00 C ATOM 1680 O ILE 243 -39.986 6.276 86.358 1.00 0.00 O ATOM 1681 CB ILE 243 -41.178 9.014 86.687 1.00 0.00 C ATOM 1682 CEN ILE 243 -41.337 10.046 86.997 1.00 0.00 C ATOM 1683 H ILE 243 -42.843 6.975 87.187 1.00 0.00 H ATOM 1684 N ASN 244 -39.956 6.960 84.216 1.00 0.00 N ATOM 1685 CA ASN 244 -38.844 6.096 83.838 1.00 0.00 C ATOM 1686 C ASN 244 -37.581 6.906 83.578 1.00 0.00 C ATOM 1687 O ASN 244 -37.641 8.117 83.362 1.00 0.00 O ATOM 1688 CB ASN 244 -39.186 5.252 82.624 1.00 0.00 C ATOM 1689 CEN ASN 244 -39.582 4.302 82.418 1.00 0.00 C ATOM 1690 H ASN 244 -40.367 7.566 83.519 1.00 0.00 H ATOM 1691 N THR 245 -36.437 6.231 83.599 1.00 0.00 N ATOM 1692 CA THR 245 -35.158 6.881 83.338 1.00 0.00 C ATOM 1693 C THR 245 -35.227 7.751 82.090 1.00 0.00 C ATOM 1694 O THR 245 -34.731 8.878 82.079 1.00 0.00 O ATOM 1695 CB THR 245 -34.024 5.852 83.171 1.00 0.00 C ATOM 1696 CEN THR 245 -33.694 5.414 83.373 1.00 0.00 C ATOM 1697 H THR 245 -36.453 5.242 83.802 1.00 0.00 H ATOM 1698 N ASP 246 -35.845 7.222 81.039 1.00 0.00 N ATOM 1699 CA ASP 246 -35.965 7.944 79.778 1.00 0.00 C ATOM 1700 C ASP 246 -36.900 9.139 79.913 1.00 0.00 C ATOM 1701 O ASP 246 -36.613 10.223 79.407 1.00 0.00 O ATOM 1702 CB ASP 246 -36.462 7.010 78.671 1.00 0.00 C ATOM 1703 CEN ASP 246 -36.106 6.444 77.903 1.00 0.00 C ATOM 1704 H ASP 246 -36.242 6.296 81.117 1.00 0.00 H ATOM 1705 N ALA 247 -38.019 8.933 80.600 1.00 0.00 N ATOM 1706 CA ALA 247 -38.996 9.995 80.808 1.00 0.00 C ATOM 1707 C ALA 247 -38.431 11.096 81.696 1.00 0.00 C ATOM 1708 O ALA 247 -38.606 12.283 81.417 1.00 0.00 O ATOM 1709 CB ALA 247 -40.274 9.428 81.408 1.00 0.00 C ATOM 1710 CEN ALA 247 -40.273 9.429 81.408 1.00 0.00 C ATOM 1711 H ALA 247 -38.198 8.017 80.987 1.00 0.00 H ATOM 1712 N VAL 248 -37.754 10.697 82.766 1.00 0.00 N ATOM 1713 CA VAL 248 -37.135 11.650 83.680 1.00 0.00 C ATOM 1714 C VAL 248 -35.889 12.273 83.066 1.00 0.00 C ATOM 1715 O VAL 248 -35.588 13.444 83.300 1.00 0.00 O ATOM 1716 CB VAL 248 -36.758 10.986 85.018 1.00 0.00 C ATOM 1717 CEN VAL 248 -36.922 10.952 85.686 1.00 0.00 C ATOM 1718 H VAL 248 -37.665 9.708 82.952 1.00 0.00 H ATOM 1719 N LEU 249 -35.166 11.485 82.277 1.00 0.00 N ATOM 1720 CA LEU 249 -34.087 12.011 81.449 1.00 0.00 C ATOM 1721 C LEU 249 -34.622 12.953 80.379 1.00 0.00 C ATOM 1722 O LEU 249 -34.042 14.007 80.121 1.00 0.00 O ATOM 1723 CB LEU 249 -33.304 10.859 80.805 1.00 0.00 C ATOM 1724 CEN LEU 249 -31.930 10.231 81.106 1.00 0.00 C ATOM 1725 H LEU 249 -35.370 10.496 82.250 1.00 0.00 H ATOM 1726 N ASN 250 -35.732 12.566 79.758 1.00 0.00 N ATOM 1727 CA ASN 250 -36.352 13.380 78.721 1.00 0.00 C ATOM 1728 C ASN 250 -36.753 14.748 79.260 1.00 0.00 C ATOM 1729 O ASN 250 -36.574 15.766 78.592 1.00 0.00 O ATOM 1730 CB ASN 250 -37.556 12.683 78.114 1.00 0.00 C ATOM 1731 CEN ASN 250 -37.767 12.051 77.302 1.00 0.00 C ATOM 1732 H ASN 250 -36.155 11.685 80.012 1.00 0.00 H ATOM 1733 N PRO 251 -37.296 14.764 80.473 1.00 0.00 N ATOM 1734 CA PRO 251 -37.675 16.011 81.125 1.00 0.00 C ATOM 1735 C PRO 251 -36.461 16.901 81.359 1.00 0.00 C ATOM 1736 O PRO 251 -36.501 18.104 81.099 1.00 0.00 O ATOM 1737 CB PRO 251 -38.326 15.562 82.444 1.00 0.00 C ATOM 1738 CEN PRO 251 -37.897 13.926 81.877 1.00 0.00 C ATOM 1739 N VAL 252 -35.381 16.304 81.851 1.00 0.00 N ATOM 1740 CA VAL 252 -34.170 17.051 82.171 1.00 0.00 C ATOM 1741 C VAL 252 -33.575 17.695 80.925 1.00 0.00 C ATOM 1742 O VAL 252 -33.298 18.894 80.907 1.00 0.00 O ATOM 1743 CB VAL 252 -33.108 16.150 82.829 1.00 0.00 C ATOM 1744 CEN VAL 252 -32.786 16.016 83.423 1.00 0.00 C ATOM 1745 H VAL 252 -35.400 15.307 82.008 1.00 0.00 H ATOM 1746 N VAL 253 -33.382 16.891 79.885 1.00 0.00 N ATOM 1747 CA VAL 253 -32.806 17.379 78.638 1.00 0.00 C ATOM 1748 C VAL 253 -33.631 18.520 78.058 1.00 0.00 C ATOM 1749 O VAL 253 -33.085 19.509 77.570 1.00 0.00 O ATOM 1750 CB VAL 253 -32.695 16.255 77.589 1.00 0.00 C ATOM 1751 CEN VAL 253 -32.248 15.851 77.255 1.00 0.00 C ATOM 1752 H VAL 253 -33.641 15.918 79.960 1.00 0.00 H ATOM 1753 N THR 254 -34.951 18.377 78.114 1.00 0.00 N ATOM 1754 CA THR 254 -35.855 19.393 77.588 1.00 0.00 C ATOM 1755 C THR 254 -35.717 20.703 78.353 1.00 0.00 C ATOM 1756 O THR 254 -35.733 21.783 77.763 1.00 0.00 O ATOM 1757 CB THR 254 -37.322 18.928 77.645 1.00 0.00 C ATOM 1758 CEN THR 254 -37.750 18.556 77.501 1.00 0.00 C ATOM 1759 H THR 254 -35.338 17.543 78.533 1.00 0.00 H ATOM 1760 N GLN 255 -35.583 20.600 79.671 1.00 0.00 N ATOM 1761 CA GLN 255 -35.472 21.778 80.524 1.00 0.00 C ATOM 1762 C GLN 255 -34.128 22.469 80.337 1.00 0.00 C ATOM 1763 O GLN 255 -34.051 23.697 80.299 1.00 0.00 O ATOM 1764 CB GLN 255 -35.657 21.394 81.994 1.00 0.00 C ATOM 1765 CEN GLN 255 -36.787 21.366 83.324 1.00 0.00 C ATOM 1766 H GLN 255 -35.555 19.683 80.093 1.00 0.00 H ATOM 1767 N TYR 256 -33.071 21.673 80.221 1.00 0.00 N ATOM 1768 CA TYR 256 -31.720 22.208 80.093 1.00 0.00 C ATOM 1769 C TYR 256 -31.559 22.994 78.799 1.00 0.00 C ATOM 1770 O TYR 256 -30.934 24.054 78.779 1.00 0.00 O ATOM 1771 CB TYR 256 -30.689 21.079 80.151 1.00 0.00 C ATOM 1772 CEN TYR 256 -29.577 20.324 81.276 1.00 0.00 C ATOM 1773 H TYR 256 -33.205 20.672 80.222 1.00 0.00 H TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 225 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 41.91 80.7 88 25.1 350 ARMSMC SECONDARY STRUCTURE . . 25.54 92.8 69 30.3 228 ARMSMC SURFACE . . . . . . . . 39.04 75.9 54 26.0 208 ARMSMC BURIED . . . . . . . . 46.11 88.2 34 23.9 142 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 146 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 137 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 94 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 90 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 56 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 108 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 74 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 68 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 69 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 39 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 28 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 24 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 23 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 22 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 13 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 10 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 7.54 (Number of atoms: 45) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 7.54 45 25.6 176 CRMSCA CRN = ALL/NP . . . . . 0.1675 CRMSCA SECONDARY STRUCTURE . . 7.47 35 30.7 114 CRMSCA SURFACE . . . . . . . . 8.35 28 26.7 105 CRMSCA BURIED . . . . . . . . 5.96 17 23.9 71 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 7.59 225 25.8 873 CRMSMC SECONDARY STRUCTURE . . 7.48 175 30.9 567 CRMSMC SURFACE . . . . . . . . 8.38 140 26.9 521 CRMSMC BURIED . . . . . . . . 6.08 85 24.1 352 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 8.07 45 7.0 643 CRMSSC RELIABLE SIDE CHAINS . 8.07 45 8.3 543 CRMSSC SECONDARY STRUCTURE . . 7.88 35 8.5 412 CRMSSC SURFACE . . . . . . . . 8.99 28 7.0 398 CRMSSC BURIED . . . . . . . . 6.25 17 6.9 245 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 7.59 225 16.7 1347 CRMSALL SECONDARY STRUCTURE . . 7.48 175 20.2 868 CRMSALL SURFACE . . . . . . . . 8.38 140 17.1 818 CRMSALL BURIED . . . . . . . . 6.08 85 16.1 529 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.962 1.000 0.500 45 25.6 176 ERRCA SECONDARY STRUCTURE . . 6.897 1.000 0.500 35 30.7 114 ERRCA SURFACE . . . . . . . . 7.829 1.000 0.500 28 26.7 105 ERRCA BURIED . . . . . . . . 5.535 1.000 0.500 17 23.9 71 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.998 1.000 0.500 225 25.8 873 ERRMC SECONDARY STRUCTURE . . 6.889 1.000 0.500 175 30.9 567 ERRMC SURFACE . . . . . . . . 7.826 1.000 0.500 140 26.9 521 ERRMC BURIED . . . . . . . . 5.634 1.000 0.500 85 24.1 352 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.495 1.000 0.500 45 7.0 643 ERRSC RELIABLE SIDE CHAINS . 7.495 1.000 0.500 45 8.3 543 ERRSC SECONDARY STRUCTURE . . 7.332 1.000 0.500 35 8.5 412 ERRSC SURFACE . . . . . . . . 8.489 1.000 0.500 28 7.0 398 ERRSC BURIED . . . . . . . . 5.858 1.000 0.500 17 6.9 245 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.998 1.000 0.500 225 16.7 1347 ERRALL SECONDARY STRUCTURE . . 6.889 1.000 0.500 175 20.2 868 ERRALL SURFACE . . . . . . . . 7.826 1.000 0.500 140 17.1 818 ERRALL BURIED . . . . . . . . 5.634 1.000 0.500 85 16.1 529 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 0 17 35 45 176 DISTCA CA (P) 0.00 0.00 0.00 9.66 19.89 176 DISTCA CA (RMS) 0.00 0.00 0.00 4.39 5.97 DISTCA ALL (N) 0 0 0 82 177 225 1347 DISTALL ALL (P) 0.00 0.00 0.00 6.09 13.14 1347 DISTALL ALL (RMS) 0.00 0.00 0.00 4.35 6.03 DISTALL END of the results output