####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 85 ( 666), selected 85 , name T0534TS471_1-D1 # Molecule2: number of CA atoms 178 ( 1402), selected 85 , name T0534-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0534TS471_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 53 257 - 309 3.46 21.05 LCS_AVERAGE: 22.95 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 37 261 - 297 1.98 21.92 LCS_AVERAGE: 14.24 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 261 - 285 0.79 20.68 LCS_AVERAGE: 8.29 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 85 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT N 49 N 49 5 18 24 5 5 5 9 14 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT Y 50 Y 50 5 18 24 5 5 5 9 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT M 51 M 51 16 18 24 5 9 15 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT R 52 R 52 16 18 24 5 5 5 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT N 53 N 53 16 18 24 7 13 15 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT V 54 V 54 16 18 24 5 13 15 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT A 55 A 55 16 18 24 5 13 15 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT A 56 A 56 16 18 24 5 13 15 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT L 57 L 57 16 18 24 7 13 15 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT L 58 L 58 16 18 24 7 13 15 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT K 59 K 59 16 18 24 7 13 15 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT T 60 T 60 16 18 24 7 13 15 16 16 18 19 19 19 20 22 23 23 24 25 27 28 29 30 31 LCS_GDT D 61 D 61 16 18 24 7 13 15 16 16 18 19 19 19 20 22 23 24 37 43 48 51 54 55 57 LCS_GDT A 62 A 62 16 18 24 7 13 15 16 16 18 19 19 19 20 22 23 23 24 28 38 42 53 55 57 LCS_GDT T 63 T 63 16 18 24 6 13 15 16 16 18 19 19 19 20 22 23 23 26 28 38 50 54 55 57 LCS_GDT N 64 N 64 16 18 24 6 11 15 16 16 18 19 19 24 28 43 50 52 53 53 53 54 54 55 57 LCS_GDT L 65 L 65 16 18 24 6 13 15 16 16 18 19 20 30 41 48 51 52 53 53 53 54 54 55 57 LCS_GDT Y 66 Y 66 16 18 24 6 13 15 16 16 18 19 19 19 20 24 29 36 46 49 52 54 54 55 57 LCS_GDT N 67 N 67 3 18 24 2 3 3 4 6 8 14 17 19 20 22 23 23 30 33 39 46 51 55 56 LCS_GDT A 68 A 68 3 4 24 3 3 3 4 4 5 8 11 17 20 22 23 23 31 33 42 46 51 55 56 LCS_GDT W 69 W 69 3 4 24 3 3 3 3 4 4 6 10 14 20 22 23 23 24 28 30 39 40 44 50 LCS_GDT N 70 N 70 3 6 24 3 3 4 5 6 7 9 11 17 20 22 23 23 24 25 29 31 33 37 39 LCS_GDT S 71 S 71 4 6 24 3 4 4 5 6 7 9 9 9 10 17 19 23 24 25 26 28 33 34 38 LCS_GDT S 72 S 72 4 6 24 3 4 4 5 6 7 9 9 9 10 12 14 20 21 23 26 28 33 37 39 LCS_GDT Y 73 Y 73 4 6 11 3 4 4 5 6 7 9 9 9 11 14 16 20 23 25 29 31 33 37 39 LCS_GDT K 74 K 74 4 6 11 3 4 4 5 6 7 9 9 9 11 14 16 20 23 25 29 31 33 37 39 LCS_GDT G 75 G 75 4 6 11 3 4 4 4 6 7 9 9 9 11 14 16 20 23 25 29 31 33 37 39 LCS_GDT G 76 G 76 4 5 11 0 4 4 4 5 7 7 7 9 10 13 16 20 22 24 29 31 33 37 38 LCS_GDT E 77 E 77 3 5 11 3 3 3 4 4 5 5 7 9 10 10 12 13 15 18 20 27 33 37 38 LCS_GDT S 78 S 78 3 5 11 3 3 3 4 4 5 5 7 8 8 8 10 10 15 25 26 27 33 37 38 LCS_GDT Y 79 Y 79 3 5 11 3 3 3 4 4 5 5 7 8 8 9 10 10 11 18 18 20 20 24 27 LCS_GDT A 80 A 80 3 4 11 3 3 3 4 4 4 5 7 8 8 9 10 10 15 18 18 22 22 24 27 LCS_GDT V 257 V 257 4 4 53 3 4 4 4 4 6 8 21 24 37 43 46 49 51 53 53 54 54 55 55 LCS_GDT D 258 D 258 4 29 53 3 4 4 4 4 11 24 40 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT A 259 A 259 4 30 53 3 4 4 4 4 15 24 32 36 44 49 51 52 53 53 53 54 54 55 57 LCS_GDT V 260 V 260 4 36 53 3 4 4 4 11 26 31 34 38 42 45 49 50 52 53 53 54 54 55 55 LCS_GDT V 261 V 261 25 37 53 5 18 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT V 262 V 262 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT P 263 P 263 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT T 264 T 264 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT Y 265 Y 265 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT K 266 K 266 25 37 53 14 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT S 267 S 267 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT L 268 L 268 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT K 269 K 269 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT E 270 E 270 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT K 271 K 271 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT N 272 N 272 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT D 273 D 273 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT A 274 A 274 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT L 275 L 275 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT Y 276 Y 276 25 37 53 9 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT N 277 N 277 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT A 278 A 278 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT V 279 V 279 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT I 280 I 280 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT V 281 V 281 25 37 53 4 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT L 282 L 282 25 37 53 18 22 25 27 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT A 283 A 283 25 37 53 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT D 284 D 284 25 37 53 4 16 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT N 285 N 285 25 37 53 4 11 22 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT P 286 P 286 5 37 53 3 5 6 7 21 33 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT S 287 S 287 5 37 53 4 5 16 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT N 288 N 288 5 37 53 4 5 9 19 31 33 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT S 289 S 289 5 37 53 4 5 9 19 31 33 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT A 290 A 290 5 37 53 4 5 14 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT F 291 F 291 15 37 53 4 14 22 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT E 292 E 292 15 37 53 4 12 22 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT T 293 T 293 15 37 53 4 12 22 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT A 294 A 294 15 37 53 7 12 16 19 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT C 295 C 295 15 37 53 8 10 16 27 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT D 296 D 296 15 37 53 8 12 16 18 29 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT A 297 A 297 15 37 53 8 12 16 18 25 31 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT W 298 W 298 15 23 53 8 12 16 18 28 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT I 299 I 299 15 23 53 8 12 16 18 25 30 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT T 300 T 300 15 23 53 8 12 16 18 25 28 34 40 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT A 301 A 301 15 23 53 8 12 16 18 25 28 34 40 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT R 302 R 302 15 23 53 7 12 16 18 25 28 37 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT E 303 E 303 15 23 53 8 10 16 18 25 28 33 38 42 47 50 50 52 53 53 53 54 54 55 57 LCS_GDT P 304 P 304 15 23 53 6 12 16 18 25 28 33 38 42 46 50 51 52 53 53 53 54 54 55 57 LCS_GDT W 305 W 305 15 23 53 6 11 16 18 25 30 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT E 306 E 306 15 23 53 6 9 16 18 25 31 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT K 307 K 307 15 23 53 6 10 16 18 25 28 35 40 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT S 308 S 308 11 23 53 3 7 12 18 25 28 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_GDT E 309 E 309 8 23 53 12 22 25 27 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 LCS_AVERAGE LCS_A: 15.16 ( 8.29 14.24 22.95 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 18 22 25 29 33 35 38 43 46 48 50 51 52 53 53 53 54 54 55 57 GDT PERCENT_AT 10.11 12.36 14.04 16.29 18.54 19.66 21.35 24.16 25.84 26.97 28.09 28.65 29.21 29.78 29.78 29.78 30.34 30.34 30.90 32.02 GDT RMS_LOCAL 0.33 0.42 0.67 1.32 1.52 1.71 1.98 2.46 2.71 2.88 3.09 3.37 3.45 3.76 3.46 3.46 3.73 3.73 4.03 5.16 GDT RMS_ALL_AT 20.53 20.52 20.76 21.78 21.53 21.52 21.67 21.26 21.03 20.94 20.83 20.58 20.56 20.24 21.05 21.05 20.76 20.76 20.43 19.49 # Checking swapping # possible swapping detected: D 61 D 61 # possible swapping detected: Y 79 Y 79 # possible swapping detected: E 292 E 292 # possible swapping detected: E 306 E 306 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA N 49 N 49 47.868 0 0.466 0.740 52.259 0.000 0.000 LGA Y 50 Y 50 43.893 0 0.036 0.710 45.932 0.000 0.000 LGA M 51 M 51 43.919 0 0.040 1.095 51.069 0.000 0.000 LGA R 52 R 52 43.570 0 0.025 1.502 50.597 0.000 0.000 LGA N 53 N 53 37.907 0 0.072 0.959 41.674 0.000 0.000 LGA V 54 V 54 33.961 0 0.037 0.236 36.289 0.000 0.000 LGA A 55 A 55 33.502 0 0.039 0.043 35.896 0.000 0.000 LGA A 56 A 56 32.140 0 0.039 0.049 33.662 0.000 0.000 LGA L 57 L 57 25.893 0 0.053 1.116 28.533 0.000 0.000 LGA L 58 L 58 23.663 0 0.043 0.680 28.181 0.000 0.000 LGA K 59 K 59 25.045 0 0.050 0.796 36.728 0.000 0.000 LGA T 60 T 60 21.156 0 0.036 1.223 22.835 0.000 0.000 LGA D 61 D 61 15.472 0 0.063 1.059 17.853 0.000 0.000 LGA A 62 A 62 16.271 0 0.047 0.049 18.340 0.000 0.000 LGA T 63 T 63 18.704 0 0.036 0.105 22.309 0.000 0.000 LGA N 64 N 64 13.833 0 0.066 1.117 15.288 0.000 0.000 LGA L 65 L 65 11.670 0 0.035 1.360 13.531 0.000 2.202 LGA Y 66 Y 66 16.736 0 0.575 1.314 24.393 0.000 0.000 LGA N 67 N 67 22.248 0 0.657 0.697 24.354 0.000 0.000 LGA A 68 A 68 24.261 0 0.626 0.610 25.429 0.000 0.000 LGA W 69 W 69 26.164 0 0.648 1.343 28.336 0.000 0.000 LGA N 70 N 70 30.040 0 0.674 0.562 34.301 0.000 0.000 LGA S 71 S 71 36.636 0 0.565 0.674 38.070 0.000 0.000 LGA S 72 S 72 38.941 0 0.137 0.517 42.397 0.000 0.000 LGA Y 73 Y 73 39.220 0 0.113 1.057 42.436 0.000 0.000 LGA K 74 K 74 43.912 0 0.407 0.889 47.252 0.000 0.000 LGA G 75 G 75 47.510 0 0.689 0.689 48.323 0.000 0.000 LGA G 76 G 76 46.728 0 0.588 0.588 47.438 0.000 0.000 LGA E 77 E 77 49.632 0 0.291 1.215 55.761 0.000 0.000 LGA S 78 S 78 45.764 0 0.218 0.886 47.190 0.000 0.000 LGA Y 79 Y 79 40.192 0 0.651 1.580 41.912 0.000 0.000 LGA A 80 A 80 40.016 0 0.560 0.565 40.374 0.000 0.000 LGA V 257 V 257 7.687 0 0.066 1.224 10.562 12.143 7.551 LGA D 258 D 258 4.760 0 0.087 1.194 6.924 32.976 25.714 LGA A 259 A 259 5.638 0 0.568 0.518 8.921 17.262 16.476 LGA V 260 V 260 6.561 0 0.567 1.056 10.011 24.286 14.354 LGA V 261 V 261 2.186 0 0.247 1.043 3.268 65.119 67.619 LGA V 262 V 262 1.506 0 0.067 0.161 2.352 75.000 72.925 LGA P 263 P 263 2.641 0 0.031 0.166 3.818 62.857 56.395 LGA T 264 T 264 1.943 0 0.021 0.989 3.153 77.143 69.728 LGA Y 265 Y 265 0.121 0 0.079 0.420 4.433 92.857 74.206 LGA K 266 K 266 2.186 0 0.036 0.627 4.688 66.786 54.762 LGA S 267 S 267 2.487 0 0.043 0.682 4.988 64.762 57.937 LGA L 268 L 268 1.162 0 0.057 0.140 2.225 85.952 81.667 LGA K 269 K 269 0.766 0 0.041 0.804 4.613 88.214 70.317 LGA E 270 E 270 1.845 0 0.045 1.324 6.363 75.000 57.884 LGA K 271 K 271 1.695 0 0.082 0.808 5.661 72.857 60.582 LGA N 272 N 272 0.711 0 0.028 0.881 2.803 90.476 87.500 LGA D 273 D 273 1.125 0 0.032 0.890 2.878 83.690 73.333 LGA A 274 A 274 2.031 0 0.050 0.053 2.232 66.786 66.381 LGA L 275 L 275 1.722 0 0.048 1.105 4.057 72.857 67.500 LGA Y 276 Y 276 1.075 0 0.036 1.475 8.375 81.429 56.389 LGA N 277 N 277 1.629 0 0.047 0.232 1.855 75.000 73.929 LGA A 278 A 278 1.999 0 0.035 0.040 2.104 72.857 71.238 LGA V 279 V 279 1.281 0 0.043 1.284 3.157 81.429 72.449 LGA I 280 I 280 0.651 0 0.642 0.931 3.145 78.095 73.750 LGA V 281 V 281 2.343 0 0.122 0.785 3.428 64.762 59.456 LGA L 282 L 282 2.773 0 0.071 1.368 7.409 60.952 42.798 LGA A 283 A 283 1.775 0 0.063 0.075 1.975 72.857 72.857 LGA D 284 D 284 1.487 0 0.036 0.134 2.502 79.286 73.095 LGA N 285 N 285 1.302 0 0.307 0.624 4.809 77.262 63.155 LGA P 286 P 286 3.562 0 0.648 0.755 5.397 59.524 46.803 LGA S 287 S 287 1.825 0 0.074 0.563 2.955 62.976 65.079 LGA N 288 N 288 3.861 0 0.041 0.326 5.055 45.238 37.679 LGA S 289 S 289 3.781 1 0.266 0.277 4.133 51.905 40.794 LGA A 290 A 290 1.965 0 0.022 0.037 2.691 73.214 73.143 LGA F 291 F 291 1.839 0 0.355 0.500 6.578 81.548 47.446 LGA E 292 E 292 1.181 0 0.055 1.222 6.486 83.690 60.529 LGA T 293 T 293 1.332 0 0.049 0.958 2.635 77.381 74.422 LGA A 294 A 294 2.393 0 0.053 0.074 2.788 64.881 63.333 LGA C 295 C 295 1.852 0 0.019 0.799 3.771 68.810 65.238 LGA D 296 D 296 2.932 0 0.033 0.192 3.824 53.810 56.429 LGA A 297 A 297 3.954 0 0.049 0.050 4.482 43.452 42.190 LGA W 298 W 298 2.991 0 0.036 0.233 4.524 50.119 48.469 LGA I 299 I 299 3.933 0 0.023 0.998 5.073 37.738 39.821 LGA T 300 T 300 5.730 0 0.057 0.923 6.233 22.857 21.633 LGA A 301 A 301 5.440 0 0.066 0.066 5.878 25.000 25.238 LGA R 302 R 302 4.759 0 0.073 1.314 5.440 28.810 43.203 LGA E 303 E 303 6.948 0 0.054 0.243 11.081 14.286 7.302 LGA P 304 P 304 7.390 0 0.044 0.391 9.347 13.571 9.320 LGA W 305 W 305 4.847 0 0.077 1.321 7.384 33.333 29.490 LGA E 306 E 306 4.235 0 0.044 0.751 7.512 34.286 26.243 LGA K 307 K 307 6.200 0 0.238 0.948 7.714 19.286 13.545 LGA S 308 S 308 5.579 0 0.710 0.829 6.944 27.738 22.937 LGA E 309 E 309 2.605 0 0.375 1.399 10.089 45.952 25.873 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 85 340 340 100.00 664 664 100.00 178 SUMMARY(RMSD_GDC): 17.375 17.073 17.630 17.362 15.339 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 85 178 4.0 43 2.46 20.646 19.841 1.680 LGA_LOCAL RMSD: 2.460 Number of atoms: 43 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 21.260 Number of assigned atoms: 85 Std_ASGN_ATOMS RMSD: 17.375 Standard rmsd on all 85 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.226739 * X + -0.434124 * Y + 0.871852 * Z + -68.802017 Y_new = -0.799616 * X + 0.594051 * Y + 0.087845 * Z + -19.847610 Z_new = -0.556061 * X + -0.677229 * Y + -0.481827 * Z + 107.428207 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.847102 0.589639 -2.189178 [DEG: -105.8312 33.7838 -125.4306 ] ZXZ: 1.671214 2.073535 -2.454128 [DEG: 95.7535 118.8048 -140.6112 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0534TS471_1-D1 REMARK 2: T0534-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0534TS471_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 85 178 4.0 43 2.46 19.841 17.38 REMARK ---------------------------------------------------------- MOLECULE T0534TS471_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0534 REMARK MODEL 1 REMARK PARENT 2nrj_A ATOM 1 N ASN 49 -37.969 -11.196 88.937 1.00 0.00 N ATOM 2 CA ASN 49 -38.405 -11.062 87.531 1.00 0.00 C ATOM 3 CB ASN 49 -39.892 -10.669 87.472 1.00 0.00 C ATOM 4 CG ASN 49 -40.407 -10.926 86.062 1.00 0.00 C ATOM 5 OD1 ASN 49 -39.627 -11.128 85.132 1.00 0.00 O ATOM 6 ND2 ASN 49 -41.756 -10.910 85.893 1.00 0.00 N ATOM 7 C ASN 49 -37.589 -10.011 86.853 1.00 0.00 C ATOM 8 O ASN 49 -36.363 -9.996 86.955 1.00 0.00 O ATOM 9 N TYR 50 -38.259 -9.096 86.130 1.00 0.00 N ATOM 10 CA TYR 50 -37.548 -8.074 85.427 1.00 0.00 C ATOM 11 CB TYR 50 -38.482 -7.172 84.599 1.00 0.00 C ATOM 12 CG TYR 50 -37.648 -6.137 83.925 1.00 0.00 C ATOM 13 CD1 TYR 50 -37.338 -4.961 84.572 1.00 0.00 C ATOM 14 CD2 TYR 50 -37.175 -6.338 82.650 1.00 0.00 C ATOM 15 CE1 TYR 50 -36.571 -4.002 83.957 1.00 0.00 C ATOM 16 CE2 TYR 50 -36.405 -5.382 82.029 1.00 0.00 C ATOM 17 CZ TYR 50 -36.102 -4.212 82.683 1.00 0.00 C ATOM 18 OH TYR 50 -35.314 -3.230 82.049 1.00 0.00 O ATOM 19 C TYR 50 -36.846 -7.207 86.419 1.00 0.00 C ATOM 20 O TYR 50 -35.658 -6.920 86.281 1.00 0.00 O ATOM 21 N MET 51 -37.568 -6.776 87.467 1.00 0.00 N ATOM 22 CA MET 51 -36.986 -5.893 88.430 1.00 0.00 C ATOM 23 CB MET 51 -38.003 -5.418 89.485 1.00 0.00 C ATOM 24 CG MET 51 -37.486 -4.307 90.405 1.00 0.00 C ATOM 25 SD MET 51 -36.231 -4.820 91.618 1.00 0.00 S ATOM 26 CE MET 51 -37.412 -5.640 92.726 1.00 0.00 C ATOM 27 C MET 51 -35.884 -6.605 89.143 1.00 0.00 C ATOM 28 O MET 51 -34.824 -6.034 89.399 1.00 0.00 O ATOM 29 N ARG 52 -36.112 -7.887 89.477 1.00 0.00 N ATOM 30 CA ARG 52 -35.183 -8.621 90.285 1.00 0.00 C ATOM 31 CB ARG 52 -35.707 -10.024 90.642 1.00 0.00 C ATOM 32 CG ARG 52 -37.012 -9.985 91.441 1.00 0.00 C ATOM 33 CD ARG 52 -37.562 -11.364 91.813 1.00 0.00 C ATOM 34 NE ARG 52 -36.909 -11.782 93.086 1.00 0.00 N ATOM 35 CZ ARG 52 -37.524 -12.689 93.899 1.00 0.00 C ATOM 36 NH1 ARG 52 -38.730 -13.219 93.540 1.00 0.00 N ATOM 37 NH2 ARG 52 -36.938 -13.063 95.074 1.00 0.00 N ATOM 38 C ARG 52 -33.854 -8.793 89.616 1.00 0.00 C ATOM 39 O ARG 52 -32.822 -8.498 90.217 1.00 0.00 O ATOM 40 N ASN 53 -33.820 -9.250 88.349 1.00 0.00 N ATOM 41 CA ASN 53 -32.519 -9.516 87.806 1.00 0.00 C ATOM 42 CB ASN 53 -32.198 -11.020 87.748 1.00 0.00 C ATOM 43 CG ASN 53 -33.227 -11.697 86.855 1.00 0.00 C ATOM 44 OD1 ASN 53 -32.927 -12.098 85.732 1.00 0.00 O ATOM 45 ND2 ASN 53 -34.478 -11.832 87.368 1.00 0.00 N ATOM 46 C ASN 53 -32.396 -8.982 86.418 1.00 0.00 C ATOM 47 O ASN 53 -31.308 -8.592 85.996 1.00 0.00 O ATOM 48 N VAL 54 -33.507 -8.929 85.667 1.00 0.00 N ATOM 49 CA VAL 54 -33.409 -8.501 84.305 1.00 0.00 C ATOM 50 CB VAL 54 -34.741 -8.483 83.612 1.00 0.00 C ATOM 51 CG1 VAL 54 -34.549 -7.951 82.183 1.00 0.00 C ATOM 52 CG2 VAL 54 -35.340 -9.899 83.677 1.00 0.00 C ATOM 53 C VAL 54 -32.853 -7.109 84.277 1.00 0.00 C ATOM 54 O VAL 54 -31.954 -6.810 83.493 1.00 0.00 O ATOM 55 N ALA 55 -33.341 -6.234 85.175 1.00 0.00 N ATOM 56 CA ALA 55 -32.960 -4.849 85.160 1.00 0.00 C ATOM 57 CB ALA 55 -33.642 -4.035 86.272 1.00 0.00 C ATOM 58 C ALA 55 -31.482 -4.710 85.348 1.00 0.00 C ATOM 59 O ALA 55 -30.837 -3.909 84.672 1.00 0.00 O ATOM 60 N ALA 56 -30.898 -5.500 86.263 1.00 0.00 N ATOM 61 CA ALA 56 -29.501 -5.376 86.558 1.00 0.00 C ATOM 62 CB ALA 56 -29.038 -6.346 87.658 1.00 0.00 C ATOM 63 C ALA 56 -28.705 -5.680 85.331 1.00 0.00 C ATOM 64 O ALA 56 -27.708 -5.020 85.041 1.00 0.00 O ATOM 65 N LEU 57 -29.146 -6.685 84.559 1.00 0.00 N ATOM 66 CA LEU 57 -28.384 -7.112 83.427 1.00 0.00 C ATOM 67 CB LEU 57 -29.003 -8.324 82.707 1.00 0.00 C ATOM 68 CG LEU 57 -27.994 -9.143 81.870 1.00 0.00 C ATOM 69 CD1 LEU 57 -27.261 -8.305 80.815 1.00 0.00 C ATOM 70 CD2 LEU 57 -27.029 -9.912 82.787 1.00 0.00 C ATOM 71 C LEU 57 -28.332 -5.950 82.476 1.00 0.00 C ATOM 72 O LEU 57 -27.333 -5.750 81.787 1.00 0.00 O ATOM 73 N LEU 58 -29.405 -5.130 82.426 1.00 0.00 N ATOM 74 CA LEU 58 -29.394 -4.029 81.499 1.00 0.00 C ATOM 75 CB LEU 58 -30.586 -3.050 81.575 1.00 0.00 C ATOM 76 CG LEU 58 -31.973 -3.578 81.170 1.00 0.00 C ATOM 77 CD1 LEU 58 -32.591 -4.448 82.266 1.00 0.00 C ATOM 78 CD2 LEU 58 -32.895 -2.425 80.739 1.00 0.00 C ATOM 79 C LEU 58 -28.224 -3.159 81.823 1.00 0.00 C ATOM 80 O LEU 58 -27.539 -2.665 80.928 1.00 0.00 O ATOM 81 N LYS 59 -27.955 -2.961 83.123 1.00 0.00 N ATOM 82 CA LYS 59 -26.908 -2.067 83.520 1.00 0.00 C ATOM 83 CB LYS 59 -26.739 -2.000 85.047 1.00 0.00 C ATOM 84 CG LYS 59 -27.921 -1.341 85.760 1.00 0.00 C ATOM 85 CD LYS 59 -27.955 -1.598 87.269 1.00 0.00 C ATOM 86 CE LYS 59 -29.140 -0.936 87.975 1.00 0.00 C ATOM 87 NZ LYS 59 -29.161 -1.328 89.401 1.00 0.00 N ATOM 88 C LYS 59 -25.609 -2.530 82.939 1.00 0.00 C ATOM 89 O LYS 59 -24.822 -1.723 82.443 1.00 0.00 O ATOM 90 N THR 60 -25.347 -3.848 82.965 1.00 0.00 N ATOM 91 CA THR 60 -24.086 -4.318 82.468 1.00 0.00 C ATOM 92 CB THR 60 -23.912 -5.804 82.597 1.00 0.00 C ATOM 93 OG1 THR 60 -24.862 -6.489 81.795 1.00 0.00 O ATOM 94 CG2 THR 60 -24.088 -6.190 84.076 1.00 0.00 C ATOM 95 C THR 60 -23.981 -3.985 81.014 1.00 0.00 C ATOM 96 O THR 60 -22.943 -3.521 80.541 1.00 0.00 O ATOM 97 N ASP 61 -25.076 -4.188 80.265 1.00 0.00 N ATOM 98 CA ASP 61 -25.041 -3.967 78.847 1.00 0.00 C ATOM 99 CB ASP 61 -26.374 -4.281 78.155 1.00 0.00 C ATOM 100 CG ASP 61 -26.576 -5.786 78.186 1.00 0.00 C ATOM 101 OD1 ASP 61 -25.701 -6.499 78.745 1.00 0.00 O ATOM 102 OD2 ASP 61 -27.617 -6.240 77.644 1.00 0.00 O ATOM 103 C ASP 61 -24.742 -2.529 78.589 1.00 0.00 C ATOM 104 O ASP 61 -24.008 -2.198 77.658 1.00 0.00 O ATOM 105 N ALA 62 -25.291 -1.635 79.426 1.00 0.00 N ATOM 106 CA ALA 62 -25.098 -0.229 79.235 1.00 0.00 C ATOM 107 CB ALA 62 -25.785 0.614 80.323 1.00 0.00 C ATOM 108 C ALA 62 -23.634 0.045 79.307 1.00 0.00 C ATOM 109 O ALA 62 -23.109 0.863 78.552 1.00 0.00 O ATOM 110 N THR 63 -22.926 -0.663 80.206 1.00 0.00 N ATOM 111 CA THR 63 -21.529 -0.402 80.387 1.00 0.00 C ATOM 112 CB THR 63 -20.876 -1.328 81.372 1.00 0.00 C ATOM 113 OG1 THR 63 -21.493 -1.201 82.644 1.00 0.00 O ATOM 114 CG2 THR 63 -19.381 -0.976 81.471 1.00 0.00 C ATOM 115 C THR 63 -20.833 -0.577 79.083 1.00 0.00 C ATOM 116 O THR 63 -20.001 0.247 78.705 1.00 0.00 O ATOM 117 N ASN 64 -21.169 -1.645 78.341 1.00 0.00 N ATOM 118 CA ASN 64 -20.489 -1.874 77.102 1.00 0.00 C ATOM 119 CB ASN 64 -21.001 -3.123 76.363 1.00 0.00 C ATOM 120 CG ASN 64 -20.730 -4.336 77.238 1.00 0.00 C ATOM 121 OD1 ASN 64 -21.582 -5.211 77.379 1.00 0.00 O ATOM 122 ND2 ASN 64 -19.515 -4.389 77.848 1.00 0.00 N ATOM 123 C ASN 64 -20.749 -0.708 76.198 1.00 0.00 C ATOM 124 O ASN 64 -19.839 -0.162 75.578 1.00 0.00 O ATOM 125 N LEU 65 -22.017 -0.280 76.115 1.00 0.00 N ATOM 126 CA LEU 65 -22.393 0.768 75.211 1.00 0.00 C ATOM 127 CB LEU 65 -23.908 1.031 75.218 1.00 0.00 C ATOM 128 CG LEU 65 -24.784 -0.127 74.705 1.00 0.00 C ATOM 129 CD1 LEU 65 -26.272 0.263 74.731 1.00 0.00 C ATOM 130 CD2 LEU 65 -24.327 -0.616 73.323 1.00 0.00 C ATOM 131 C LEU 65 -21.754 2.077 75.568 1.00 0.00 C ATOM 132 O LEU 65 -21.222 2.740 74.678 1.00 0.00 O ATOM 133 N TYR 66 -21.761 2.431 76.880 1.00 0.00 N ATOM 134 CA TYR 66 -21.389 3.707 77.463 1.00 0.00 C ATOM 135 CB TYR 66 -20.465 3.675 78.696 1.00 0.00 C ATOM 136 CG TYR 66 -21.285 3.605 79.938 1.00 0.00 C ATOM 137 CD1 TYR 66 -22.046 4.690 80.310 1.00 0.00 C ATOM 138 CD2 TYR 66 -21.265 2.502 80.754 1.00 0.00 C ATOM 139 CE1 TYR 66 -22.801 4.668 81.458 1.00 0.00 C ATOM 140 CE2 TYR 66 -22.017 2.468 81.905 1.00 0.00 C ATOM 141 CZ TYR 66 -22.787 3.550 82.257 1.00 0.00 C ATOM 142 OH TYR 66 -23.556 3.516 83.438 1.00 0.00 O ATOM 143 C TYR 66 -20.810 4.710 76.528 1.00 0.00 C ATOM 144 O TYR 66 -19.817 4.482 75.838 1.00 0.00 O ATOM 145 N ASN 67 -21.433 5.904 76.556 1.00 0.00 N ATOM 146 CA ASN 67 -21.043 7.009 75.737 1.00 0.00 C ATOM 147 CB ASN 67 -22.222 7.706 75.045 1.00 0.00 C ATOM 148 CG ASN 67 -22.946 6.669 74.216 1.00 0.00 C ATOM 149 OD1 ASN 67 -22.429 5.568 74.032 1.00 0.00 O ATOM 150 ND2 ASN 67 -24.166 7.015 73.723 1.00 0.00 N ATOM 151 C ASN 67 -20.491 8.035 76.659 1.00 0.00 C ATOM 152 O ASN 67 -20.894 8.129 77.817 1.00 0.00 O ATOM 153 N ALA 68 -19.520 8.820 76.165 1.00 0.00 N ATOM 154 CA ALA 68 -18.986 9.867 76.974 1.00 0.00 C ATOM 155 CB ALA 68 -17.716 9.467 77.741 1.00 0.00 C ATOM 156 C ALA 68 -18.615 10.965 76.043 1.00 0.00 C ATOM 157 O ALA 68 -18.350 10.734 74.864 1.00 0.00 O ATOM 158 N TRP 69 -18.610 12.210 76.552 1.00 0.00 N ATOM 159 CA TRP 69 -18.217 13.301 75.721 1.00 0.00 C ATOM 160 CB TRP 69 -18.538 14.679 76.332 1.00 0.00 C ATOM 161 CG TRP 69 -17.983 14.898 77.719 1.00 0.00 C ATOM 162 CD2 TRP 69 -18.672 14.523 78.923 1.00 0.00 C ATOM 163 CD1 TRP 69 -16.801 15.457 78.110 1.00 0.00 C ATOM 164 NE1 TRP 69 -16.711 15.453 79.482 1.00 0.00 N ATOM 165 CE2 TRP 69 -17.856 14.880 79.994 1.00 0.00 C ATOM 166 CE3 TRP 69 -19.887 13.930 79.115 1.00 0.00 C ATOM 167 CZ2 TRP 69 -18.245 14.646 81.283 1.00 0.00 C ATOM 168 CZ3 TRP 69 -20.276 13.696 80.415 1.00 0.00 C ATOM 169 CH2 TRP 69 -19.470 14.047 81.479 1.00 0.00 C ATOM 170 C TRP 69 -16.746 13.162 75.529 1.00 0.00 C ATOM 171 O TRP 69 -16.024 12.781 76.449 1.00 0.00 O ATOM 172 N ASN 70 -16.267 13.439 74.302 1.00 0.00 N ATOM 173 CA ASN 70 -14.873 13.258 74.033 1.00 0.00 C ATOM 174 CB ASN 70 -14.605 12.473 72.740 1.00 0.00 C ATOM 175 CG ASN 70 -13.112 12.204 72.648 1.00 0.00 C ATOM 176 OD1 ASN 70 -12.531 11.542 73.507 1.00 0.00 O ATOM 177 ND2 ASN 70 -12.474 12.728 71.568 1.00 0.00 N ATOM 178 C ASN 70 -14.247 14.601 73.893 1.00 0.00 C ATOM 179 O ASN 70 -14.749 15.472 73.183 1.00 0.00 O ATOM 180 N SER 71 -13.117 14.795 74.595 1.00 0.00 N ATOM 181 CA SER 71 -12.451 16.057 74.568 1.00 0.00 C ATOM 182 CB SER 71 -11.515 16.281 75.764 1.00 0.00 C ATOM 183 OG SER 71 -12.261 16.223 76.970 1.00 0.00 O ATOM 184 C SER 71 -11.612 16.125 73.342 1.00 0.00 C ATOM 185 O SER 71 -11.184 15.109 72.797 1.00 0.00 O ATOM 186 N SER 72 -11.354 17.359 72.880 1.00 0.00 N ATOM 187 CA SER 72 -10.520 17.525 71.733 1.00 0.00 C ATOM 188 CB SER 72 -11.047 18.555 70.725 1.00 0.00 C ATOM 189 OG SER 72 -11.153 19.822 71.355 1.00 0.00 O ATOM 190 C SER 72 -9.221 18.040 72.239 1.00 0.00 C ATOM 191 O SER 72 -9.150 18.616 73.324 1.00 0.00 O ATOM 192 N TYR 73 -8.145 17.811 71.470 1.00 0.00 N ATOM 193 CA TYR 73 -6.874 18.293 71.903 1.00 0.00 C ATOM 194 CB TYR 73 -5.746 17.241 71.849 1.00 0.00 C ATOM 195 CG TYR 73 -5.879 16.311 73.008 1.00 0.00 C ATOM 196 CD1 TYR 73 -6.786 15.276 73.001 1.00 0.00 C ATOM 197 CD2 TYR 73 -5.069 16.464 74.111 1.00 0.00 C ATOM 198 CE1 TYR 73 -6.891 14.430 74.083 1.00 0.00 C ATOM 199 CE2 TYR 73 -5.169 15.621 75.195 1.00 0.00 C ATOM 200 CZ TYR 73 -6.086 14.599 75.186 1.00 0.00 C ATOM 201 OH TYR 73 -6.196 13.732 76.297 1.00 0.00 O ATOM 202 C TYR 73 -6.463 19.386 70.988 1.00 0.00 C ATOM 203 O TYR 73 -6.063 19.136 69.852 1.00 0.00 O ATOM 204 N LYS 74 -6.602 20.644 71.447 1.00 0.00 N ATOM 205 CA LYS 74 -6.027 21.700 70.677 1.00 0.00 C ATOM 206 CB LYS 74 -6.328 23.131 71.173 1.00 0.00 C ATOM 207 CG LYS 74 -7.756 23.619 70.912 1.00 0.00 C ATOM 208 CD LYS 74 -8.020 25.053 71.397 1.00 0.00 C ATOM 209 CE LYS 74 -8.346 25.193 72.886 1.00 0.00 C ATOM 210 NZ LYS 74 -7.109 25.391 73.677 1.00 0.00 N ATOM 211 C LYS 74 -4.568 21.482 70.847 1.00 0.00 C ATOM 212 O LYS 74 -3.776 21.649 69.921 1.00 0.00 O ATOM 213 N GLY 75 -4.194 21.084 72.078 1.00 0.00 N ATOM 214 CA GLY 75 -2.828 20.826 72.402 1.00 0.00 C ATOM 215 C GLY 75 -2.845 20.014 73.648 1.00 0.00 C ATOM 216 O GLY 75 -3.780 20.090 74.445 1.00 0.00 O ATOM 217 N GLY 76 -1.789 19.212 73.856 1.00 0.00 N ATOM 218 CA GLY 76 -1.801 18.409 75.030 1.00 0.00 C ATOM 219 C GLY 76 -0.529 18.665 75.748 1.00 0.00 C ATOM 220 O GLY 76 0.084 17.739 76.274 1.00 0.00 O ATOM 221 N GLU 77 -0.106 19.940 75.817 1.00 0.00 N ATOM 222 CA GLU 77 1.085 20.198 76.561 1.00 0.00 C ATOM 223 CB GLU 77 1.775 21.524 76.200 1.00 0.00 C ATOM 224 CG GLU 77 2.451 21.541 74.825 1.00 0.00 C ATOM 225 CD GLU 77 3.758 20.768 74.938 1.00 0.00 C ATOM 226 OE1 GLU 77 3.756 19.714 75.627 1.00 0.00 O ATOM 227 OE2 GLU 77 4.770 21.210 74.331 1.00 0.00 O ATOM 228 C GLU 77 0.662 20.287 77.990 1.00 0.00 C ATOM 229 O GLU 77 0.288 21.345 78.493 1.00 0.00 O ATOM 230 N SER 78 0.710 19.135 78.677 1.00 0.00 N ATOM 231 CA SER 78 0.353 19.008 80.058 1.00 0.00 C ATOM 232 CB SER 78 -1.142 19.205 80.391 1.00 0.00 C ATOM 233 OG SER 78 -1.522 20.557 80.185 1.00 0.00 O ATOM 234 C SER 78 0.666 17.593 80.373 1.00 0.00 C ATOM 235 O SER 78 1.547 16.993 79.758 1.00 0.00 O ATOM 236 N TYR 79 -0.044 17.029 81.359 1.00 0.00 N ATOM 237 CA TYR 79 0.170 15.659 81.698 1.00 0.00 C ATOM 238 CB TYR 79 -0.721 15.195 82.861 1.00 0.00 C ATOM 239 CG TYR 79 -0.198 16.005 84.005 1.00 0.00 C ATOM 240 CD1 TYR 79 -0.649 17.287 84.241 1.00 0.00 C ATOM 241 CD2 TYR 79 0.773 15.487 84.831 1.00 0.00 C ATOM 242 CE1 TYR 79 -0.143 18.031 85.285 1.00 0.00 C ATOM 243 CE2 TYR 79 1.282 16.222 85.876 1.00 0.00 C ATOM 244 CZ TYR 79 0.819 17.495 86.108 1.00 0.00 C ATOM 245 OH TYR 79 1.342 18.251 87.180 1.00 0.00 O ATOM 246 C TYR 79 -0.018 14.850 80.451 1.00 0.00 C ATOM 247 O TYR 79 -0.773 15.228 79.557 1.00 0.00 O ATOM 248 N ALA 80 0.711 13.719 80.362 1.00 0.00 N ATOM 249 CA ALA 80 0.789 12.900 79.185 1.00 0.00 C ATOM 250 CB ALA 80 1.468 11.539 79.417 1.00 0.00 C ATOM 251 C ALA 80 -0.567 12.628 78.631 1.00 0.00 C ATOM 252 O ALA 80 -1.588 12.751 79.306 1.00 0.00 O ATOM 1600 N VAL 257 -40.524 -7.828 74.268 1.00 0.00 N ATOM 1601 CA VAL 257 -40.209 -7.913 72.874 1.00 0.00 C ATOM 1602 CB VAL 257 -41.377 -8.332 72.020 1.00 0.00 C ATOM 1603 CG1 VAL 257 -41.809 -9.745 72.446 1.00 0.00 C ATOM 1604 CG2 VAL 257 -42.499 -7.287 72.129 1.00 0.00 C ATOM 1605 C VAL 257 -39.754 -6.573 72.407 1.00 0.00 C ATOM 1606 O VAL 257 -38.780 -6.467 71.663 1.00 0.00 O ATOM 1607 N ASP 258 -40.434 -5.504 72.853 1.00 0.00 N ATOM 1608 CA ASP 258 -40.073 -4.209 72.370 1.00 0.00 C ATOM 1609 CB ASP 258 -41.024 -3.070 72.806 1.00 0.00 C ATOM 1610 CG ASP 258 -40.992 -2.847 74.312 1.00 0.00 C ATOM 1611 OD1 ASP 258 -39.916 -2.470 74.847 1.00 0.00 O ATOM 1612 OD2 ASP 258 -42.064 -3.032 74.945 1.00 0.00 O ATOM 1613 C ASP 258 -38.685 -3.905 72.810 1.00 0.00 C ATOM 1614 O ASP 258 -37.926 -3.281 72.070 1.00 0.00 O ATOM 1615 N ALA 259 -38.289 -4.340 74.021 1.00 0.00 N ATOM 1616 CA ALA 259 -36.962 -3.965 74.394 1.00 0.00 C ATOM 1617 CB ALA 259 -36.843 -3.541 75.867 1.00 0.00 C ATOM 1618 C ALA 259 -36.029 -5.117 74.195 1.00 0.00 C ATOM 1619 O ALA 259 -35.875 -5.961 75.073 1.00 0.00 O ATOM 1620 N VAL 260 -35.379 -5.166 73.015 1.00 0.00 N ATOM 1621 CA VAL 260 -34.325 -6.096 72.726 1.00 0.00 C ATOM 1622 CB VAL 260 -34.814 -7.408 72.169 1.00 0.00 C ATOM 1623 CG1 VAL 260 -35.734 -7.160 70.959 1.00 0.00 C ATOM 1624 CG2 VAL 260 -33.584 -8.276 71.851 1.00 0.00 C ATOM 1625 C VAL 260 -33.422 -5.412 71.722 1.00 0.00 C ATOM 1626 O VAL 260 -33.734 -5.347 70.536 1.00 0.00 O ATOM 1627 N VAL 261 -32.273 -4.875 72.186 1.00 0.00 N ATOM 1628 CA VAL 261 -31.316 -4.137 71.394 1.00 0.00 C ATOM 1629 CB VAL 261 -30.470 -3.156 72.169 1.00 0.00 C ATOM 1630 CG1 VAL 261 -29.515 -3.889 73.113 1.00 0.00 C ATOM 1631 CG2 VAL 261 -29.758 -2.239 71.161 1.00 0.00 C ATOM 1632 C VAL 261 -30.450 -5.026 70.544 1.00 0.00 C ATOM 1633 O VAL 261 -29.746 -4.538 69.661 1.00 0.00 O ATOM 1634 N VAL 262 -30.472 -6.351 70.786 1.00 0.00 N ATOM 1635 CA VAL 262 -29.574 -7.284 70.154 1.00 0.00 C ATOM 1636 CB VAL 262 -29.989 -8.725 70.309 1.00 0.00 C ATOM 1637 CG1 VAL 262 -28.998 -9.590 69.513 1.00 0.00 C ATOM 1638 CG2 VAL 262 -30.095 -9.104 71.792 1.00 0.00 C ATOM 1639 C VAL 262 -29.547 -7.085 68.673 1.00 0.00 C ATOM 1640 O VAL 262 -28.471 -7.153 68.082 1.00 0.00 O ATOM 1641 N PRO 263 -30.642 -6.844 68.024 1.00 0.00 N ATOM 1642 CA PRO 263 -30.573 -6.743 66.597 1.00 0.00 C ATOM 1643 CD PRO 263 -31.944 -7.311 68.472 1.00 0.00 C ATOM 1644 CB PRO 263 -32.021 -6.650 66.124 1.00 0.00 C ATOM 1645 CG PRO 263 -32.787 -7.458 67.190 1.00 0.00 C ATOM 1646 C PRO 263 -29.661 -5.668 66.103 1.00 0.00 C ATOM 1647 O PRO 263 -29.084 -5.843 65.032 1.00 0.00 O ATOM 1648 N THR 264 -29.512 -4.548 66.833 1.00 0.00 N ATOM 1649 CA THR 264 -28.643 -3.525 66.332 1.00 0.00 C ATOM 1650 CB THR 264 -28.710 -2.250 67.130 1.00 0.00 C ATOM 1651 OG1 THR 264 -27.904 -1.254 66.519 1.00 0.00 O ATOM 1652 CG2 THR 264 -28.251 -2.508 68.575 1.00 0.00 C ATOM 1653 C THR 264 -27.228 -4.020 66.329 1.00 0.00 C ATOM 1654 O THR 264 -26.511 -3.873 65.341 1.00 0.00 O ATOM 1655 N TYR 265 -26.793 -4.639 67.441 1.00 0.00 N ATOM 1656 CA TYR 265 -25.443 -5.096 67.567 1.00 0.00 C ATOM 1657 CB TYR 265 -25.136 -5.556 68.999 1.00 0.00 C ATOM 1658 CG TYR 265 -25.602 -4.415 69.838 1.00 0.00 C ATOM 1659 CD1 TYR 265 -25.026 -3.170 69.719 1.00 0.00 C ATOM 1660 CD2 TYR 265 -26.615 -4.593 70.750 1.00 0.00 C ATOM 1661 CE1 TYR 265 -25.464 -2.118 70.491 1.00 0.00 C ATOM 1662 CE2 TYR 265 -27.054 -3.546 71.525 1.00 0.00 C ATOM 1663 CZ TYR 265 -26.481 -2.305 71.396 1.00 0.00 C ATOM 1664 OH TYR 265 -26.933 -1.232 72.191 1.00 0.00 O ATOM 1665 C TYR 265 -25.256 -6.223 66.611 1.00 0.00 C ATOM 1666 O TYR 265 -24.213 -6.348 65.968 1.00 0.00 O ATOM 1667 N LYS 266 -26.288 -7.077 66.500 1.00 0.00 N ATOM 1668 CA LYS 266 -26.253 -8.203 65.615 1.00 0.00 C ATOM 1669 CB LYS 266 -27.572 -8.993 65.621 1.00 0.00 C ATOM 1670 CG LYS 266 -27.576 -10.205 64.688 1.00 0.00 C ATOM 1671 CD LYS 266 -28.851 -11.042 64.808 1.00 0.00 C ATOM 1672 CE LYS 266 -30.067 -10.365 64.168 1.00 0.00 C ATOM 1673 NZ LYS 266 -31.269 -11.212 64.326 1.00 0.00 N ATOM 1674 C LYS 266 -26.085 -7.679 64.229 1.00 0.00 C ATOM 1675 O LYS 266 -25.302 -8.214 63.444 1.00 0.00 O ATOM 1676 N SER 267 -26.813 -6.597 63.899 1.00 0.00 N ATOM 1677 CA SER 267 -26.759 -6.050 62.576 1.00 0.00 C ATOM 1678 CB SER 267 -27.684 -4.836 62.388 1.00 0.00 C ATOM 1679 OG SER 267 -29.042 -5.228 62.525 1.00 0.00 O ATOM 1680 C SER 267 -25.363 -5.592 62.322 1.00 0.00 C ATOM 1681 O SER 267 -24.838 -5.738 61.220 1.00 0.00 O ATOM 1682 N LEU 268 -24.718 -5.035 63.359 1.00 0.00 N ATOM 1683 CA LEU 268 -23.383 -4.549 63.205 1.00 0.00 C ATOM 1684 CB LEU 268 -22.848 -3.871 64.476 1.00 0.00 C ATOM 1685 CG LEU 268 -21.412 -3.340 64.328 1.00 0.00 C ATOM 1686 CD1 LEU 268 -21.335 -2.227 63.269 1.00 0.00 C ATOM 1687 CD2 LEU 268 -20.837 -2.909 65.686 1.00 0.00 C ATOM 1688 C LEU 268 -22.520 -5.722 62.877 1.00 0.00 C ATOM 1689 O LEU 268 -21.589 -5.619 62.079 1.00 0.00 O ATOM 1690 N LYS 269 -22.818 -6.885 63.480 1.00 0.00 N ATOM 1691 CA LYS 269 -22.025 -8.044 63.215 1.00 0.00 C ATOM 1692 CB LYS 269 -22.526 -9.294 63.956 1.00 0.00 C ATOM 1693 CG LYS 269 -21.682 -10.542 63.681 1.00 0.00 C ATOM 1694 CD LYS 269 -21.984 -11.713 64.618 1.00 0.00 C ATOM 1695 CE LYS 269 -21.139 -12.955 64.331 1.00 0.00 C ATOM 1696 NZ LYS 269 -21.491 -14.036 65.279 1.00 0.00 N ATOM 1697 C LYS 269 -22.099 -8.342 61.752 1.00 0.00 C ATOM 1698 O LYS 269 -21.085 -8.620 61.113 1.00 0.00 O ATOM 1699 N GLU 270 -23.313 -8.277 61.181 1.00 0.00 N ATOM 1700 CA GLU 270 -23.496 -8.588 59.795 1.00 0.00 C ATOM 1701 CB GLU 270 -24.976 -8.546 59.378 1.00 0.00 C ATOM 1702 CG GLU 270 -25.223 -9.049 57.955 1.00 0.00 C ATOM 1703 CD GLU 270 -25.106 -10.566 57.974 1.00 0.00 C ATOM 1704 OE1 GLU 270 -24.138 -11.075 58.599 1.00 0.00 O ATOM 1705 OE2 GLU 270 -25.986 -11.236 57.372 1.00 0.00 O ATOM 1706 C GLU 270 -22.767 -7.583 58.962 1.00 0.00 C ATOM 1707 O GLU 270 -22.093 -7.938 57.997 1.00 0.00 O ATOM 1708 N LYS 271 -22.868 -6.294 59.336 1.00 0.00 N ATOM 1709 CA LYS 271 -22.275 -5.246 58.558 1.00 0.00 C ATOM 1710 CB LYS 271 -22.557 -3.846 59.128 1.00 0.00 C ATOM 1711 CG LYS 271 -24.016 -3.415 58.971 1.00 0.00 C ATOM 1712 CD LYS 271 -24.463 -3.314 57.511 1.00 0.00 C ATOM 1713 CE LYS 271 -25.922 -2.884 57.340 1.00 0.00 C ATOM 1714 NZ LYS 271 -26.263 -2.805 55.902 1.00 0.00 N ATOM 1715 C LYS 271 -20.794 -5.430 58.512 1.00 0.00 C ATOM 1716 O LYS 271 -20.180 -5.288 57.457 1.00 0.00 O ATOM 1717 N ASN 272 -20.178 -5.761 59.659 1.00 0.00 N ATOM 1718 CA ASN 272 -18.753 -5.913 59.695 1.00 0.00 C ATOM 1719 CB ASN 272 -18.190 -6.106 61.111 1.00 0.00 C ATOM 1720 CG ASN 272 -18.147 -4.732 61.767 1.00 0.00 C ATOM 1721 OD1 ASN 272 -17.080 -4.133 61.899 1.00 0.00 O ATOM 1722 ND2 ASN 272 -19.335 -4.207 62.174 1.00 0.00 N ATOM 1723 C ASN 272 -18.346 -7.071 58.846 1.00 0.00 C ATOM 1724 O ASN 272 -17.291 -7.034 58.215 1.00 0.00 O ATOM 1725 N ASP 273 -19.168 -8.137 58.816 1.00 0.00 N ATOM 1726 CA ASP 273 -18.848 -9.301 58.040 1.00 0.00 C ATOM 1727 CB ASP 273 -19.912 -10.405 58.189 1.00 0.00 C ATOM 1728 CG ASP 273 -19.414 -11.662 57.490 1.00 0.00 C ATOM 1729 OD1 ASP 273 -18.311 -11.603 56.883 1.00 0.00 O ATOM 1730 OD2 ASP 273 -20.129 -12.696 57.557 1.00 0.00 O ATOM 1731 C ASP 273 -18.797 -8.895 56.602 1.00 0.00 C ATOM 1732 O ASP 273 -17.912 -9.313 55.856 1.00 0.00 O ATOM 1733 N ALA 274 -19.744 -8.038 56.183 1.00 0.00 N ATOM 1734 CA ALA 274 -19.799 -7.596 54.821 1.00 0.00 C ATOM 1735 CB ALA 274 -20.960 -6.624 54.557 1.00 0.00 C ATOM 1736 C ALA 274 -18.528 -6.867 54.530 1.00 0.00 C ATOM 1737 O ALA 274 -17.966 -6.981 53.442 1.00 0.00 O ATOM 1738 N LEU 275 -18.037 -6.105 55.522 1.00 0.00 N ATOM 1739 CA LEU 275 -16.853 -5.315 55.365 1.00 0.00 C ATOM 1740 CB LEU 275 -16.517 -4.512 56.641 1.00 0.00 C ATOM 1741 CG LEU 275 -15.259 -3.616 56.563 1.00 0.00 C ATOM 1742 CD1 LEU 275 -13.950 -4.425 56.558 1.00 0.00 C ATOM 1743 CD2 LEU 275 -15.358 -2.634 55.386 1.00 0.00 C ATOM 1744 C LEU 275 -15.715 -6.238 55.061 1.00 0.00 C ATOM 1745 O LEU 275 -14.861 -5.916 54.237 1.00 0.00 O ATOM 1746 N TYR 276 -15.674 -7.422 55.705 1.00 0.00 N ATOM 1747 CA TYR 276 -14.579 -8.317 55.458 1.00 0.00 C ATOM 1748 CB TYR 276 -14.714 -9.698 56.126 1.00 0.00 C ATOM 1749 CG TYR 276 -14.717 -9.567 57.605 1.00 0.00 C ATOM 1750 CD1 TYR 276 -13.541 -9.625 58.313 1.00 0.00 C ATOM 1751 CD2 TYR 276 -15.903 -9.398 58.279 1.00 0.00 C ATOM 1752 CE1 TYR 276 -13.548 -9.511 59.681 1.00 0.00 C ATOM 1753 CE2 TYR 276 -15.918 -9.284 59.647 1.00 0.00 C ATOM 1754 CZ TYR 276 -14.738 -9.341 60.345 1.00 0.00 C ATOM 1755 OH TYR 276 -14.746 -9.226 61.748 1.00 0.00 O ATOM 1756 C TYR 276 -14.596 -8.637 54.001 1.00 0.00 C ATOM 1757 O TYR 276 -13.560 -8.657 53.340 1.00 0.00 O ATOM 1758 N ASN 277 -15.798 -8.892 53.460 1.00 0.00 N ATOM 1759 CA ASN 277 -15.906 -9.276 52.086 1.00 0.00 C ATOM 1760 CB ASN 277 -17.360 -9.532 51.653 1.00 0.00 C ATOM 1761 CG ASN 277 -17.854 -10.779 52.375 1.00 0.00 C ATOM 1762 OD1 ASN 277 -17.144 -11.778 52.470 1.00 0.00 O ATOM 1763 ND2 ASN 277 -19.105 -10.715 52.906 1.00 0.00 N ATOM 1764 C ASN 277 -15.371 -8.179 51.226 1.00 0.00 C ATOM 1765 O ASN 277 -14.682 -8.447 50.245 1.00 0.00 O ATOM 1766 N ALA 278 -15.695 -6.915 51.554 1.00 0.00 N ATOM 1767 CA ALA 278 -15.248 -5.798 50.768 1.00 0.00 C ATOM 1768 CB ALA 278 -15.863 -4.467 51.229 1.00 0.00 C ATOM 1769 C ALA 278 -13.756 -5.646 50.840 1.00 0.00 C ATOM 1770 O ALA 278 -13.114 -5.355 49.832 1.00 0.00 O ATOM 1771 N VAL 279 -13.159 -5.816 52.037 1.00 0.00 N ATOM 1772 CA VAL 279 -11.740 -5.622 52.170 1.00 0.00 C ATOM 1773 CB VAL 279 -11.239 -5.709 53.585 1.00 0.00 C ATOM 1774 CG1 VAL 279 -11.944 -4.617 54.402 1.00 0.00 C ATOM 1775 CG2 VAL 279 -11.426 -7.133 54.125 1.00 0.00 C ATOM 1776 C VAL 279 -11.053 -6.656 51.351 1.00 0.00 C ATOM 1777 O VAL 279 -10.099 -6.371 50.628 1.00 0.00 O ATOM 1778 N ILE 280 -11.563 -7.893 51.405 1.00 0.00 N ATOM 1779 CA ILE 280 -10.980 -8.893 50.576 1.00 0.00 C ATOM 1780 CB ILE 280 -11.367 -10.299 50.938 1.00 0.00 C ATOM 1781 CG2 ILE 280 -12.879 -10.461 50.711 1.00 0.00 C ATOM 1782 CG1 ILE 280 -10.505 -11.309 50.164 1.00 0.00 C ATOM 1783 CD1 ILE 280 -10.629 -12.739 50.686 1.00 0.00 C ATOM 1784 C ILE 280 -11.598 -8.547 49.274 1.00 0.00 C ATOM 1785 O ILE 280 -12.492 -7.721 49.236 1.00 0.00 O ATOM 1786 N VAL 281 -11.074 -9.024 48.151 1.00 0.00 N ATOM 1787 CA VAL 281 -11.649 -8.669 46.884 1.00 0.00 C ATOM 1788 CB VAL 281 -13.168 -8.692 46.758 1.00 0.00 C ATOM 1789 CG1 VAL 281 -13.829 -7.306 46.908 1.00 0.00 C ATOM 1790 CG2 VAL 281 -13.487 -9.361 45.411 1.00 0.00 C ATOM 1791 C VAL 281 -11.050 -7.353 46.477 1.00 0.00 C ATOM 1792 O VAL 281 -10.402 -7.265 45.437 1.00 0.00 O ATOM 1793 N LEU 282 -11.241 -6.291 47.292 1.00 0.00 N ATOM 1794 CA LEU 282 -10.673 -5.003 47.010 1.00 0.00 C ATOM 1795 CB LEU 282 -11.093 -3.908 48.006 1.00 0.00 C ATOM 1796 CG LEU 282 -12.574 -3.502 47.886 1.00 0.00 C ATOM 1797 CD1 LEU 282 -12.937 -2.407 48.900 1.00 0.00 C ATOM 1798 CD2 LEU 282 -12.929 -3.117 46.441 1.00 0.00 C ATOM 1799 C LEU 282 -9.191 -5.156 47.086 1.00 0.00 C ATOM 1800 O LEU 282 -8.445 -4.489 46.371 1.00 0.00 O ATOM 1801 N ALA 283 -8.733 -6.068 47.959 1.00 0.00 N ATOM 1802 CA ALA 283 -7.333 -6.293 48.172 1.00 0.00 C ATOM 1803 CB ALA 283 -7.056 -7.414 49.188 1.00 0.00 C ATOM 1804 C ALA 283 -6.708 -6.695 46.873 1.00 0.00 C ATOM 1805 O ALA 283 -5.543 -6.393 46.618 1.00 0.00 O ATOM 1806 N ASP 284 -7.461 -7.413 46.021 1.00 0.00 N ATOM 1807 CA ASP 284 -6.926 -7.891 44.776 1.00 0.00 C ATOM 1808 CB ASP 284 -7.937 -8.736 43.983 1.00 0.00 C ATOM 1809 CG ASP 284 -8.158 -10.038 44.741 1.00 0.00 C ATOM 1810 OD1 ASP 284 -7.420 -10.276 45.733 1.00 0.00 O ATOM 1811 OD2 ASP 284 -9.070 -10.809 44.339 1.00 0.00 O ATOM 1812 C ASP 284 -6.515 -6.746 43.891 1.00 0.00 C ATOM 1813 O ASP 284 -5.486 -6.827 43.220 1.00 0.00 O ATOM 1814 N ASN 285 -7.295 -5.645 43.868 1.00 0.00 N ATOM 1815 CA ASN 285 -7.016 -4.559 42.962 1.00 0.00 C ATOM 1816 CB ASN 285 -8.054 -3.424 43.033 1.00 0.00 C ATOM 1817 CG ASN 285 -9.378 -3.959 42.506 1.00 0.00 C ATOM 1818 OD1 ASN 285 -8.216 -3.938 42.103 1.00 0.00 O ATOM 1819 ND2 ASN 285 -10.073 -3.537 43.597 1.00 0.00 N ATOM 1820 C ASN 285 -5.675 -3.960 43.262 1.00 0.00 C ATOM 1821 O ASN 285 -5.257 -3.827 44.409 1.00 0.00 O ATOM 1822 N PRO 286 -4.973 -3.661 42.198 1.00 0.00 N ATOM 1823 CA PRO 286 -3.679 -3.034 42.307 1.00 0.00 C ATOM 1824 CD PRO 286 -5.059 -4.523 41.029 1.00 0.00 C ATOM 1825 CB PRO 286 -2.995 -3.250 40.959 1.00 0.00 C ATOM 1826 CG PRO 286 -3.650 -4.530 40.415 1.00 0.00 C ATOM 1827 C PRO 286 -3.696 -1.591 42.722 1.00 0.00 C ATOM 1828 O PRO 286 -2.708 -1.136 43.297 1.00 0.00 O ATOM 1829 N SER 287 -4.791 -0.851 42.464 1.00 0.00 N ATOM 1830 CA SER 287 -4.790 0.561 42.726 1.00 0.00 C ATOM 1831 CB SER 287 -6.106 1.260 42.341 1.00 0.00 C ATOM 1832 OG SER 287 -6.023 2.648 42.628 1.00 0.00 O ATOM 1833 C SER 287 -4.554 0.811 44.183 1.00 0.00 C ATOM 1834 O SER 287 -4.926 0.017 45.044 1.00 0.00 O ATOM 1835 N ASN 288 -3.886 1.946 44.476 1.00 0.00 N ATOM 1836 CA ASN 288 -3.564 2.353 45.814 1.00 0.00 C ATOM 1837 CB ASN 288 -2.656 3.594 45.856 1.00 0.00 C ATOM 1838 CG ASN 288 -1.294 3.200 45.303 1.00 0.00 C ATOM 1839 OD1 ASN 288 -0.736 2.167 45.667 1.00 0.00 O ATOM 1840 ND2 ASN 288 -0.745 4.045 44.389 1.00 0.00 N ATOM 1841 C ASN 288 -4.829 2.707 46.537 1.00 0.00 C ATOM 1842 O ASN 288 -4.967 2.453 47.732 1.00 0.00 O ATOM 1843 N SER 289 -5.781 3.323 45.815 1.00 0.00 N ATOM 1844 CA SER 289 -7.027 3.809 46.346 1.00 0.00 C ATOM 1845 CB SER 289 -7.709 4.811 45.394 1.00 0.00 C ATOM 1846 OG SER 289 -8.917 5.301 45.959 1.00 0.00 O ATOM 1847 C SER 289 -7.977 2.670 46.584 1.00 0.00 C ATOM 1848 O SER 289 -9.168 2.881 46.799 1.00 0.00 O ATOM 1849 N ALA 290 -7.477 1.426 46.587 1.00 0.00 N ATOM 1850 CA ALA 290 -8.335 0.278 46.660 1.00 0.00 C ATOM 1851 CB ALA 290 -7.553 -1.046 46.718 1.00 0.00 C ATOM 1852 C ALA 290 -9.223 0.325 47.872 1.00 0.00 C ATOM 1853 O ALA 290 -10.381 -0.085 47.782 1.00 0.00 O ATOM 1854 N PHE 291 -8.736 0.787 49.045 1.00 0.00 N ATOM 1855 CA PHE 291 -9.634 0.758 50.170 1.00 0.00 C ATOM 1856 CB PHE 291 -8.979 0.216 51.453 1.00 0.00 C ATOM 1857 CG PHE 291 -8.633 -1.217 51.234 1.00 0.00 C ATOM 1858 CD1 PHE 291 -9.609 -2.185 51.275 1.00 0.00 C ATOM 1859 CD2 PHE 291 -7.330 -1.595 51.005 1.00 0.00 C ATOM 1860 CE1 PHE 291 -9.291 -3.508 51.079 1.00 0.00 C ATOM 1861 CE2 PHE 291 -7.006 -2.916 50.808 1.00 0.00 C ATOM 1862 CZ PHE 291 -7.988 -3.876 50.843 1.00 0.00 C ATOM 1863 C PHE 291 -10.108 2.144 50.502 1.00 0.00 C ATOM 1864 O PHE 291 -10.527 2.405 51.628 1.00 0.00 O ATOM 1865 N GLU 292 -10.127 3.054 49.515 1.00 0.00 N ATOM 1866 CA GLU 292 -10.531 4.413 49.746 1.00 0.00 C ATOM 1867 CB GLU 292 -10.328 5.312 48.515 1.00 0.00 C ATOM 1868 CG GLU 292 -10.673 6.780 48.773 1.00 0.00 C ATOM 1869 CD GLU 292 -9.565 7.374 49.632 1.00 0.00 C ATOM 1870 OE1 GLU 292 -8.554 6.660 49.870 1.00 0.00 O ATOM 1871 OE2 GLU 292 -9.714 8.549 50.061 1.00 0.00 O ATOM 1872 C GLU 292 -11.987 4.449 50.089 1.00 0.00 C ATOM 1873 O GLU 292 -12.428 5.272 50.889 1.00 0.00 O ATOM 1874 N THR 293 -12.769 3.529 49.497 1.00 0.00 N ATOM 1875 CA THR 293 -14.197 3.516 49.641 1.00 0.00 C ATOM 1876 CB THR 293 -14.845 2.389 48.892 1.00 0.00 C ATOM 1877 OG1 THR 293 -16.258 2.532 48.917 1.00 0.00 O ATOM 1878 CG2 THR 293 -14.431 1.058 49.543 1.00 0.00 C ATOM 1879 C THR 293 -14.559 3.365 51.084 1.00 0.00 C ATOM 1880 O THR 293 -15.548 3.935 51.541 1.00 0.00 O ATOM 1881 N ALA 294 -13.766 2.581 51.831 1.00 0.00 N ATOM 1882 CA ALA 294 -14.003 2.282 53.216 1.00 0.00 C ATOM 1883 CB ALA 294 -12.969 1.300 53.793 1.00 0.00 C ATOM 1884 C ALA 294 -13.946 3.526 54.051 1.00 0.00 C ATOM 1885 O ALA 294 -14.650 3.634 55.053 1.00 0.00 O ATOM 1886 N CYS 295 -13.113 4.506 53.658 1.00 0.00 N ATOM 1887 CA CYS 295 -12.853 5.656 54.479 1.00 0.00 C ATOM 1888 CB CYS 295 -11.932 6.675 53.787 1.00 0.00 C ATOM 1889 SG CYS 295 -11.600 8.130 54.825 1.00 0.00 S ATOM 1890 C CYS 295 -14.116 6.376 54.851 1.00 0.00 C ATOM 1891 O CYS 295 -14.287 6.750 56.010 1.00 0.00 O ATOM 1892 N ASP 296 -15.048 6.584 53.905 1.00 0.00 N ATOM 1893 CA ASP 296 -16.227 7.334 54.242 1.00 0.00 C ATOM 1894 CB ASP 296 -17.202 7.464 53.059 1.00 0.00 C ATOM 1895 CG ASP 296 -16.547 8.343 52.001 1.00 0.00 C ATOM 1896 OD1 ASP 296 -15.459 8.906 52.293 1.00 0.00 O ATOM 1897 OD2 ASP 296 -17.129 8.465 50.890 1.00 0.00 O ATOM 1898 C ASP 296 -16.949 6.624 55.344 1.00 0.00 C ATOM 1899 O ASP 296 -17.394 7.246 56.308 1.00 0.00 O ATOM 1900 N ALA 297 -17.073 5.289 55.230 1.00 0.00 N ATOM 1901 CA ALA 297 -17.768 4.512 56.217 1.00 0.00 C ATOM 1902 CB ALA 297 -17.847 3.020 55.849 1.00 0.00 C ATOM 1903 C ALA 297 -17.035 4.617 57.515 1.00 0.00 C ATOM 1904 O ALA 297 -17.636 4.736 58.580 1.00 0.00 O ATOM 1905 N TRP 298 -15.695 4.585 57.443 1.00 0.00 N ATOM 1906 CA TRP 298 -14.836 4.616 58.589 1.00 0.00 C ATOM 1907 CB TRP 298 -13.369 4.594 58.118 1.00 0.00 C ATOM 1908 CG TRP 298 -12.298 4.832 59.150 1.00 0.00 C ATOM 1909 CD2 TRP 298 -11.645 6.100 59.316 1.00 0.00 C ATOM 1910 CD1 TRP 298 -11.712 3.974 60.034 1.00 0.00 C ATOM 1911 NE1 TRP 298 -10.728 4.629 60.738 1.00 0.00 N ATOM 1912 CE2 TRP 298 -10.677 5.938 60.304 1.00 0.00 C ATOM 1913 CE3 TRP 298 -11.833 7.297 58.688 1.00 0.00 C ATOM 1914 CZ2 TRP 298 -9.879 6.979 60.686 1.00 0.00 C ATOM 1915 CZ3 TRP 298 -11.030 8.347 59.076 1.00 0.00 C ATOM 1916 CH2 TRP 298 -10.071 8.189 60.055 1.00 0.00 C ATOM 1917 C TRP 298 -15.075 5.873 59.366 1.00 0.00 C ATOM 1918 O TRP 298 -15.328 5.830 60.570 1.00 0.00 O ATOM 1919 N ILE 299 -15.036 7.032 58.688 1.00 0.00 N ATOM 1920 CA ILE 299 -15.187 8.279 59.377 1.00 0.00 C ATOM 1921 CB ILE 299 -14.965 9.472 58.487 1.00 0.00 C ATOM 1922 CG2 ILE 299 -16.047 9.480 57.395 1.00 0.00 C ATOM 1923 CG1 ILE 299 -14.905 10.759 59.326 1.00 0.00 C ATOM 1924 CD1 ILE 299 -13.681 10.834 60.240 1.00 0.00 C ATOM 1925 C ILE 299 -16.556 8.374 59.971 1.00 0.00 C ATOM 1926 O ILE 299 -16.712 8.803 61.114 1.00 0.00 O ATOM 1927 N THR 300 -17.590 7.968 59.213 1.00 0.00 N ATOM 1928 CA THR 300 -18.936 8.100 59.684 1.00 0.00 C ATOM 1929 CB THR 300 -19.972 7.735 58.659 1.00 0.00 C ATOM 1930 OG1 THR 300 -21.260 8.126 59.112 1.00 0.00 O ATOM 1931 CG2 THR 300 -19.937 6.219 58.420 1.00 0.00 C ATOM 1932 C THR 300 -19.143 7.230 60.880 1.00 0.00 C ATOM 1933 O THR 300 -19.830 7.615 61.819 1.00 0.00 O ATOM 1934 N ALA 301 -18.576 6.018 60.895 1.00 0.00 N ATOM 1935 CA ALA 301 -18.810 5.166 62.022 1.00 0.00 C ATOM 1936 CB ALA 301 -18.156 3.783 61.862 1.00 0.00 C ATOM 1937 C ALA 301 -18.236 5.791 63.253 1.00 0.00 C ATOM 1938 O ALA 301 -18.866 5.804 64.309 1.00 0.00 O ATOM 1939 N ARG 302 -17.030 6.370 63.146 1.00 0.00 N ATOM 1940 CA ARG 302 -16.376 6.822 64.337 1.00 0.00 C ATOM 1941 CB ARG 302 -14.989 7.426 64.072 1.00 0.00 C ATOM 1942 CG ARG 302 -13.949 6.382 63.663 1.00 0.00 C ATOM 1943 CD ARG 302 -13.731 5.302 64.725 1.00 0.00 C ATOM 1944 NE ARG 302 -14.756 4.242 64.497 1.00 0.00 N ATOM 1945 CZ ARG 302 -14.483 3.206 63.652 1.00 0.00 C ATOM 1946 NH1 ARG 302 -13.249 3.103 63.076 1.00 0.00 N ATOM 1947 NH2 ARG 302 -15.441 2.273 63.381 1.00 0.00 N ATOM 1948 C ARG 302 -17.176 7.852 65.072 1.00 0.00 C ATOM 1949 O ARG 302 -17.391 7.709 66.274 1.00 0.00 O ATOM 1950 N GLU 303 -17.656 8.914 64.397 1.00 0.00 N ATOM 1951 CA GLU 303 -18.299 9.933 65.179 1.00 0.00 C ATOM 1952 CB GLU 303 -18.518 11.255 64.415 1.00 0.00 C ATOM 1953 CG GLU 303 -19.056 12.384 65.298 1.00 0.00 C ATOM 1954 CD GLU 303 -19.225 13.625 64.432 1.00 0.00 C ATOM 1955 OE1 GLU 303 -18.874 13.557 63.224 1.00 0.00 O ATOM 1956 OE2 GLU 303 -19.704 14.659 64.969 1.00 0.00 O ATOM 1957 C GLU 303 -19.595 9.453 65.774 1.00 0.00 C ATOM 1958 O GLU 303 -19.794 9.608 66.979 1.00 0.00 O ATOM 1959 N PRO 304 -20.488 8.860 65.023 1.00 0.00 N ATOM 1960 CA PRO 304 -21.693 8.409 65.658 1.00 0.00 C ATOM 1961 CD PRO 304 -20.802 9.419 63.718 1.00 0.00 C ATOM 1962 CB PRO 304 -22.672 8.097 64.531 1.00 0.00 C ATOM 1963 CG PRO 304 -22.295 9.138 63.465 1.00 0.00 C ATOM 1964 C PRO 304 -21.527 7.330 66.673 1.00 0.00 C ATOM 1965 O PRO 304 -22.352 7.252 67.582 1.00 0.00 O ATOM 1966 N TRP 305 -20.506 6.468 66.553 1.00 0.00 N ATOM 1967 CA TRP 305 -20.367 5.480 67.578 1.00 0.00 C ATOM 1968 CB TRP 305 -19.323 4.388 67.280 1.00 0.00 C ATOM 1969 CG TRP 305 -19.814 3.338 66.304 1.00 0.00 C ATOM 1970 CD2 TRP 305 -20.525 2.157 66.706 1.00 0.00 C ATOM 1971 CD1 TRP 305 -19.714 3.280 64.945 1.00 0.00 C ATOM 1972 NE1 TRP 305 -20.325 2.142 64.475 1.00 0.00 N ATOM 1973 CE2 TRP 305 -20.828 1.440 65.549 1.00 0.00 C ATOM 1974 CE3 TRP 305 -20.901 1.709 67.940 1.00 0.00 C ATOM 1975 CZ2 TRP 305 -21.511 0.260 65.608 1.00 0.00 C ATOM 1976 CZ3 TRP 305 -21.586 0.516 67.998 1.00 0.00 C ATOM 1977 CH2 TRP 305 -21.886 -0.194 66.854 1.00 0.00 C ATOM 1978 C TRP 305 -20.030 6.178 68.852 1.00 0.00 C ATOM 1979 O TRP 305 -20.463 5.755 69.919 1.00 0.00 O ATOM 1980 N GLU 306 -19.219 7.249 68.798 1.00 0.00 N ATOM 1981 CA GLU 306 -18.904 7.908 70.031 1.00 0.00 C ATOM 1982 CB GLU 306 -17.823 8.995 69.904 1.00 0.00 C ATOM 1983 CG GLU 306 -18.252 10.257 69.156 1.00 0.00 C ATOM 1984 CD GLU 306 -17.045 11.184 69.148 1.00 0.00 C ATOM 1985 OE1 GLU 306 -15.908 10.649 69.224 1.00 0.00 O ATOM 1986 OE2 GLU 306 -17.235 12.427 69.066 1.00 0.00 O ATOM 1987 C GLU 306 -20.132 8.568 70.578 1.00 0.00 C ATOM 1988 O GLU 306 -20.436 8.449 71.763 1.00 0.00 O ATOM 1989 N LYS 307 -20.887 9.268 69.708 1.00 0.00 N ATOM 1990 CA LYS 307 -22.041 10.002 70.144 1.00 0.00 C ATOM 1991 CB LYS 307 -22.699 10.812 69.013 1.00 0.00 C ATOM 1992 CG LYS 307 -23.863 11.687 69.483 1.00 0.00 C ATOM 1993 CD LYS 307 -24.321 12.710 68.442 1.00 0.00 C ATOM 1994 CE LYS 307 -25.515 13.550 68.896 1.00 0.00 C ATOM 1995 NZ LYS 307 -26.689 12.676 69.118 1.00 0.00 N ATOM 1996 C LYS 307 -23.058 9.041 70.662 1.00 0.00 C ATOM 1997 O LYS 307 -23.701 9.287 71.681 1.00 0.00 O ATOM 1998 N SER 308 -23.205 7.899 69.975 1.00 0.00 N ATOM 1999 CA SER 308 -24.196 6.935 70.340 1.00 0.00 C ATOM 2000 CB SER 308 -24.815 6.235 69.114 1.00 0.00 C ATOM 2001 OG SER 308 -25.855 5.348 69.500 1.00 0.00 O ATOM 2002 C SER 308 -23.497 5.911 71.163 1.00 0.00 C ATOM 2003 O SER 308 -22.349 6.098 71.557 1.00 0.00 O ATOM 2004 N GLU 309 -24.202 4.827 71.515 1.00 0.00 N ATOM 2005 CA GLU 309 -23.584 3.797 72.286 1.00 0.00 C ATOM 2006 CB GLU 309 -24.570 3.104 73.238 1.00 0.00 C ATOM 2007 CG GLU 309 -25.768 2.472 72.527 1.00 0.00 C ATOM 2008 CD GLU 309 -26.704 3.593 72.100 1.00 0.00 C ATOM 2009 OE1 GLU 309 -26.566 4.719 72.650 1.00 0.00 O ATOM 2010 OE2 GLU 309 -27.571 3.339 71.221 1.00 0.00 O ATOM 2011 C GLU 309 -23.039 2.755 71.311 1.00 0.00 C ATOM 2012 O GLU 309 -23.428 1.561 71.428 1.00 0.00 O ATOM 2013 OXT GLU 309 -22.220 3.141 70.435 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 664 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 75.10 63.5 63 17.8 354 ARMSMC SECONDARY STRUCTURE . . 63.60 76.7 43 20.9 206 ARMSMC SURFACE . . . . . . . . 87.13 48.5 33 16.8 196 ARMSMC BURIED . . . . . . . . 59.11 80.0 30 19.0 158 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 86.23 44.0 25 16.8 149 ARMSSC1 RELIABLE SIDE CHAINS . 87.93 41.7 24 17.6 136 ARMSSC1 SECONDARY STRUCTURE . . 86.79 44.4 18 21.2 85 ARMSSC1 SURFACE . . . . . . . . 86.03 46.2 13 15.3 85 ARMSSC1 BURIED . . . . . . . . 86.45 41.7 12 18.8 64 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 82.26 47.4 19 16.8 113 ARMSSC2 RELIABLE SIDE CHAINS . 51.54 63.6 11 13.6 81 ARMSSC2 SECONDARY STRUCTURE . . 87.36 40.0 15 22.7 66 ARMSSC2 SURFACE . . . . . . . . 67.42 66.7 9 13.6 66 ARMSSC2 BURIED . . . . . . . . 93.62 30.0 10 21.3 47 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 53.83 60.0 5 10.6 47 ARMSSC3 RELIABLE SIDE CHAINS . 53.83 60.0 5 12.2 41 ARMSSC3 SECONDARY STRUCTURE . . 21.24 100.0 3 11.5 26 ARMSSC3 SURFACE . . . . . . . . 59.47 50.0 4 12.9 31 ARMSSC3 BURIED . . . . . . . . 18.50 100.0 1 6.2 16 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 63.58 33.3 3 25.0 12 ARMSSC4 RELIABLE SIDE CHAINS . 63.58 33.3 3 25.0 12 ARMSSC4 SECONDARY STRUCTURE . . 49.89 50.0 2 33.3 6 ARMSSC4 SURFACE . . . . . . . . 63.58 33.3 3 33.3 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 17.38 (Number of atoms: 85) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 17.38 85 47.8 178 CRMSCA CRN = ALL/NP . . . . . 0.2044 CRMSCA SECONDARY STRUCTURE . . 16.05 65 63.1 103 CRMSCA SURFACE . . . . . . . . 17.96 48 48.5 99 CRMSCA BURIED . . . . . . . . 16.58 37 46.8 79 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 17.22 423 47.9 883 CRMSMC SECONDARY STRUCTURE . . 15.91 325 63.2 514 CRMSMC SURFACE . . . . . . . . 17.76 238 48.5 491 CRMSMC BURIED . . . . . . . . 16.50 185 47.2 392 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 18.53 324 47.0 690 CRMSSC RELIABLE SIDE CHAINS . 18.23 280 47.8 586 CRMSSC SECONDARY STRUCTURE . . 17.92 259 64.4 402 CRMSSC SURFACE . . . . . . . . 19.01 174 47.7 365 CRMSSC BURIED . . . . . . . . 17.95 150 46.2 325 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 17.80 664 47.4 1402 CRMSALL SECONDARY STRUCTURE . . 16.83 519 63.8 814 CRMSALL SURFACE . . . . . . . . 18.31 366 48.1 761 CRMSALL BURIED . . . . . . . . 17.15 298 46.5 641 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.361 1.000 0.500 85 47.8 178 ERRCA SECONDARY STRUCTURE . . 12.699 1.000 0.500 65 63.1 103 ERRCA SURFACE . . . . . . . . 15.605 1.000 0.500 48 48.5 99 ERRCA BURIED . . . . . . . . 12.748 1.000 0.500 37 46.8 79 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.236 1.000 0.500 423 47.9 883 ERRMC SECONDARY STRUCTURE . . 12.609 1.000 0.500 325 63.2 514 ERRMC SURFACE . . . . . . . . 15.395 1.000 0.500 238 48.5 491 ERRMC BURIED . . . . . . . . 12.747 1.000 0.500 185 47.2 392 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 15.221 1.000 0.500 324 47.0 690 ERRSC RELIABLE SIDE CHAINS . 14.900 1.000 0.500 280 47.8 586 ERRSC SECONDARY STRUCTURE . . 14.172 1.000 0.500 259 64.4 402 ERRSC SURFACE . . . . . . . . 16.468 1.000 0.500 174 47.7 365 ERRSC BURIED . . . . . . . . 13.774 1.000 0.500 150 46.2 325 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 14.658 1.000 0.500 664 47.4 1402 ERRALL SECONDARY STRUCTURE . . 13.289 1.000 0.500 519 63.8 814 ERRALL SURFACE . . . . . . . . 15.841 1.000 0.500 366 48.1 761 ERRALL BURIED . . . . . . . . 13.205 1.000 0.500 298 46.5 641 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 2 6 40 85 178 DISTCA CA (P) 0.00 0.00 1.12 3.37 22.47 178 DISTCA CA (RMS) 0.00 0.00 2.67 3.66 7.29 DISTCA ALL (N) 1 2 14 47 290 664 1402 DISTALL ALL (P) 0.07 0.14 1.00 3.35 20.68 1402 DISTALL ALL (RMS) 0.54 1.40 2.47 3.77 7.22 DISTALL END of the results output