####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 326), selected 44 , name T0534TS458_1_2-D2 # Molecule2: number of CA atoms 176 ( 1347), selected 44 , name T0534-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0534TS458_1_2-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 211 - 244 4.27 11.65 LCS_AVERAGE: 17.72 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 211 - 235 1.76 11.48 LONGEST_CONTINUOUS_SEGMENT: 25 212 - 236 2.00 10.95 LCS_AVERAGE: 10.69 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 211 - 230 0.80 12.27 LCS_AVERAGE: 7.79 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 211 S 211 20 25 34 4 10 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 38 43 43 LCS_GDT N 212 N 212 20 25 34 4 18 21 22 24 26 29 29 29 30 30 33 33 34 34 36 38 38 43 43 LCS_GDT E 213 E 213 20 25 34 9 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT T 214 T 214 20 25 34 6 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT V 215 V 215 20 25 34 11 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT A 216 A 216 20 25 34 11 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT A 217 A 217 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT M 218 M 218 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT D 219 D 219 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT A 220 A 220 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT C 221 C 221 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT A 222 A 222 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT E 223 E 223 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT L 224 L 224 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT E 225 E 225 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT S 226 S 226 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT I 227 I 227 20 25 34 7 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT L 228 L 228 20 25 34 7 16 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT K 229 K 229 20 25 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 34 36 38 38 39 40 LCS_GDT N 230 N 230 20 25 34 4 16 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT D 231 D 231 16 25 34 3 8 10 15 20 24 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT L 232 L 232 10 25 34 7 8 10 14 20 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT K 233 K 233 10 25 34 7 8 10 19 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT S 234 S 234 10 25 34 7 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT Y 235 Y 235 10 25 34 7 8 10 15 21 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT I 236 I 236 10 25 34 7 8 10 12 18 24 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT A 237 A 237 10 16 34 7 8 10 15 18 24 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT N 238 N 238 10 16 34 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT N 239 N 239 10 16 34 3 8 17 19 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT S 240 S 240 4 6 34 3 4 5 5 16 21 23 25 28 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT N 241 N 241 4 6 34 3 4 5 10 19 21 23 25 28 30 30 33 33 34 35 36 38 39 43 43 LCS_GDT N 242 N 242 3 6 34 3 4 4 5 6 8 11 15 27 28 29 33 33 34 34 34 36 39 43 43 LCS_GDT I 243 I 243 3 6 34 3 4 5 5 6 8 11 12 23 26 29 33 33 34 34 34 38 39 43 43 LCS_GDT N 244 N 244 3 6 34 3 4 5 5 6 8 11 12 16 21 25 27 30 34 35 36 38 39 43 43 LCS_GDT T 245 T 245 9 10 25 4 6 9 10 10 10 11 12 13 15 17 19 22 24 27 31 33 39 43 43 LCS_GDT D 246 D 246 9 10 23 4 7 9 10 10 10 11 12 13 15 17 25 30 31 35 36 38 39 43 43 LCS_GDT A 247 A 247 9 10 21 4 8 9 10 10 10 11 12 13 13 17 19 20 20 23 25 26 32 43 43 LCS_GDT V 248 V 248 9 10 21 4 8 9 10 10 10 11 11 13 13 17 19 20 21 23 26 27 32 43 43 LCS_GDT L 249 L 249 9 10 21 4 8 9 10 10 10 11 12 13 15 20 26 30 32 35 36 38 39 43 43 LCS_GDT N 250 N 250 9 10 21 4 8 9 10 10 10 11 12 13 13 17 21 30 32 35 36 38 39 43 43 LCS_GDT P 251 P 251 9 10 21 4 8 9 10 10 10 11 12 13 13 17 19 20 20 22 25 36 39 43 43 LCS_GDT V 252 V 252 9 10 21 4 8 9 10 10 10 11 12 13 15 17 21 30 32 35 36 38 39 43 43 LCS_GDT V 253 V 253 9 10 21 4 8 9 10 10 10 10 15 16 18 25 28 30 32 35 36 38 39 43 43 LCS_GDT T 254 T 254 9 10 21 4 8 9 10 10 10 10 12 13 13 17 19 20 20 22 25 36 39 43 43 LCS_AVERAGE LCS_A: 12.07 ( 7.79 10.69 17.72 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 12 18 21 22 24 26 29 29 29 30 30 33 33 34 35 36 38 39 43 43 GDT PERCENT_AT 6.82 10.23 11.93 12.50 13.64 14.77 16.48 16.48 16.48 17.05 17.05 18.75 18.75 19.32 19.89 20.45 21.59 22.16 24.43 24.43 GDT RMS_LOCAL 0.27 0.60 0.75 0.82 1.33 1.71 2.12 2.12 2.12 2.45 2.45 3.62 3.62 4.27 5.12 5.03 5.45 6.14 6.54 6.54 GDT RMS_ALL_AT 11.84 12.15 12.14 12.20 11.54 11.23 10.59 10.59 10.59 10.75 10.75 11.66 11.66 11.65 6.81 6.98 6.78 6.62 6.59 6.59 # Checking swapping # possible swapping detected: D 231 D 231 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA S 211 S 211 2.276 0 0.182 0.863 3.696 66.786 62.540 LGA N 212 N 212 2.168 0 0.034 1.086 2.810 70.952 67.976 LGA E 213 E 213 1.274 0 0.069 0.999 2.797 83.690 77.884 LGA T 214 T 214 1.081 0 0.050 0.965 3.215 90.595 80.952 LGA V 215 V 215 1.322 0 0.045 1.010 2.556 88.214 77.075 LGA A 216 A 216 1.692 0 0.064 0.064 2.139 75.000 72.952 LGA A 217 A 217 1.721 0 0.040 0.051 1.955 77.143 76.286 LGA M 218 M 218 0.962 0 0.029 0.670 3.165 90.476 78.869 LGA D 219 D 219 0.640 0 0.033 0.110 2.364 92.857 82.917 LGA A 220 A 220 1.631 0 0.038 0.042 1.974 75.000 74.571 LGA C 221 C 221 1.665 0 0.028 0.060 2.403 77.143 74.365 LGA A 222 A 222 0.756 0 0.044 0.052 0.880 90.476 90.476 LGA E 223 E 223 0.418 0 0.034 0.360 2.567 95.238 84.921 LGA L 224 L 224 1.431 0 0.037 0.201 2.504 79.286 73.095 LGA E 225 E 225 1.619 0 0.061 0.640 5.606 79.286 58.148 LGA S 226 S 226 0.877 0 0.053 0.705 2.492 88.214 84.683 LGA I 227 I 227 0.764 0 0.084 1.016 2.320 90.476 80.833 LGA L 228 L 228 1.543 0 0.062 1.427 2.980 75.000 72.143 LGA K 229 K 229 1.631 0 0.049 0.989 5.208 68.810 59.259 LGA N 230 N 230 2.318 0 0.215 0.279 3.426 68.810 59.405 LGA D 231 D 231 3.704 0 0.056 0.760 7.117 48.333 34.643 LGA L 232 L 232 3.439 0 0.063 1.402 6.604 55.476 44.881 LGA K 233 K 233 2.287 0 0.062 0.819 7.928 66.905 45.714 LGA S 234 S 234 2.325 0 0.065 0.588 4.338 77.262 63.889 LGA Y 235 Y 235 3.100 0 0.030 0.223 10.687 55.476 24.802 LGA I 236 I 236 4.377 0 0.046 1.082 9.442 40.476 25.357 LGA A 237 A 237 3.850 0 0.120 0.121 4.575 48.452 45.048 LGA N 238 N 238 1.033 0 0.588 0.858 4.408 77.619 65.952 LGA N 239 N 239 2.220 0 0.120 0.545 5.439 52.381 48.869 LGA S 240 S 240 7.853 0 0.291 0.285 9.515 8.452 6.349 LGA N 241 N 241 9.634 0 0.611 1.203 11.727 1.310 0.655 LGA N 242 N 242 14.140 0 0.580 1.217 16.419 0.000 0.000 LGA I 243 I 243 14.860 0 0.559 1.441 17.342 0.000 0.000 LGA N 244 N 244 16.540 0 0.707 1.182 17.677 0.000 0.000 LGA T 245 T 245 21.452 0 0.617 0.563 24.493 0.000 0.000 LGA D 246 D 246 21.345 0 0.066 0.202 22.209 0.000 0.000 LGA A 247 A 247 21.375 0 0.060 0.065 21.571 0.000 0.000 LGA V 248 V 248 21.399 0 0.053 0.115 22.603 0.000 0.000 LGA L 249 L 249 20.013 0 0.110 0.126 20.569 0.000 0.000 LGA N 250 N 250 19.003 0 0.050 0.397 19.415 0.000 0.000 LGA P 251 P 251 19.648 0 0.053 0.217 20.027 0.000 0.000 LGA V 252 V 252 19.534 0 0.037 0.079 20.817 0.000 0.000 LGA V 253 V 253 17.329 0 0.034 0.101 18.164 0.000 0.000 LGA T 254 T 254 17.160 0 0.223 0.900 19.382 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 44 176 176 100.00 325 325 100.00 176 SUMMARY(RMSD_GDC): 6.584 6.409 7.144 12.248 10.770 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 176 4.0 29 2.12 14.915 14.196 1.308 LGA_LOCAL RMSD: 2.117 Number of atoms: 29 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.589 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.584 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.866757 * X + 0.024741 * Y + -0.498117 * Z + -8.318966 Y_new = 0.228150 * X + 0.907805 * Y + -0.351906 * Z + -67.139816 Z_new = 0.443486 * X + -0.418662 * Y + -0.792491 * Z + 142.853638 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.884209 -0.459485 -2.655573 [DEG: 165.2530 -26.3265 -152.1531 ] ZXZ: -0.955739 2.485679 2.327409 [DEG: -54.7598 142.4189 133.3507 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0534TS458_1_2-D2 REMARK 2: T0534-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0534TS458_1_2-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 176 4.0 29 2.12 14.196 6.58 REMARK ---------------------------------------------------------- MOLECULE T0534TS458_1_2-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PARENT number 2 REMARK PFRMAT TS REMARK TARGET T0534 REMARK PARENT 1n1j_A ATOM 1 N SER 211 -10.328 23.142 71.151 1.00 52.53 N ATOM 2 CA SER 211 -10.128 24.527 71.635 1.00 52.53 C ATOM 3 CB SER 211 -10.074 25.520 70.461 1.00 52.53 C ATOM 4 OG SER 211 -8.923 25.286 69.662 1.00 52.53 O ATOM 5 C SER 211 -11.248 24.929 72.528 1.00 52.53 C ATOM 6 O SER 211 -11.922 24.091 73.121 1.00 52.53 O ATOM 7 N ASN 212 -11.459 26.249 72.647 1.00 73.11 N ATOM 8 CA ASN 212 -12.495 26.760 73.484 1.00 73.11 C ATOM 9 CB ASN 212 -12.458 28.289 73.610 1.00 73.11 C ATOM 10 CG ASN 212 -12.609 28.891 72.226 1.00 73.11 C ATOM 11 OD1 ASN 212 -11.782 28.666 71.341 1.00 73.11 O ATOM 12 ND2 ASN 212 -13.700 29.678 72.035 1.00 73.11 N ATOM 13 C ASN 212 -13.820 26.366 72.919 1.00 73.11 C ATOM 14 O ASN 212 -14.760 26.089 73.660 1.00 73.11 O ATOM 15 N GLU 213 -13.948 26.324 71.584 1.00 67.11 N ATOM 16 CA GLU 213 -15.233 26.033 71.022 1.00 67.11 C ATOM 17 CB GLU 213 -15.183 26.022 69.485 1.00 67.11 C ATOM 18 CG GLU 213 -16.530 25.794 68.800 1.00 67.11 C ATOM 19 CD GLU 213 -16.295 25.917 67.299 1.00 67.11 C ATOM 20 OE1 GLU 213 -15.172 26.348 66.919 1.00 67.11 O ATOM 21 OE2 GLU 213 -17.222 25.582 66.513 1.00 67.11 O ATOM 22 C GLU 213 -15.668 24.680 71.491 1.00 67.11 C ATOM 23 O GLU 213 -16.789 24.514 71.973 1.00 67.11 O ATOM 24 N THR 214 -14.784 23.671 71.378 1.00 94.81 N ATOM 25 CA THR 214 -15.156 22.360 71.817 1.00 94.81 C ATOM 26 CB THR 214 -14.204 21.281 71.399 1.00 94.81 C ATOM 27 OG1 THR 214 -14.767 20.009 71.686 1.00 94.81 O ATOM 28 CG2 THR 214 -12.880 21.461 72.156 1.00 94.81 C ATOM 29 C THR 214 -15.242 22.334 73.310 1.00 94.81 C ATOM 30 O THR 214 -16.136 21.700 73.868 1.00 94.81 O ATOM 31 N VAL 215 -14.319 23.041 73.998 1.00 76.36 N ATOM 32 CA VAL 215 -14.266 22.976 75.433 1.00 76.36 C ATOM 33 CB VAL 215 -13.142 23.776 76.049 1.00 76.36 C ATOM 34 CG1 VAL 215 -13.422 25.278 75.900 1.00 76.36 C ATOM 35 CG2 VAL 215 -12.972 23.328 77.509 1.00 76.36 C ATOM 36 C VAL 215 -15.560 23.478 75.975 1.00 76.36 C ATOM 37 O VAL 215 -16.100 22.920 76.928 1.00 76.36 O ATOM 38 N ALA 216 -16.100 24.551 75.369 1.00 14.96 N ATOM 39 CA ALA 216 -17.346 25.095 75.816 1.00 14.96 C ATOM 40 CB ALA 216 -17.788 26.315 74.992 1.00 14.96 C ATOM 41 C ALA 216 -18.378 24.036 75.623 1.00 14.96 C ATOM 42 O ALA 216 -19.240 23.828 76.475 1.00 14.96 O ATOM 43 N ALA 217 -18.304 23.321 74.487 1.00 19.51 N ATOM 44 CA ALA 217 -19.263 22.299 74.199 1.00 19.51 C ATOM 45 CB ALA 217 -19.033 21.614 72.840 1.00 19.51 C ATOM 46 C ALA 217 -19.156 21.246 75.252 1.00 19.51 C ATOM 47 O ALA 217 -20.164 20.707 75.704 1.00 19.51 O ATOM 48 N MET 218 -17.920 20.936 75.681 1.00 92.23 N ATOM 49 CA MET 218 -17.708 19.899 76.647 1.00 92.23 C ATOM 50 CB MET 218 -16.216 19.699 76.968 1.00 92.23 C ATOM 51 CG MET 218 -15.917 18.508 77.881 1.00 92.23 C ATOM 52 SD MET 218 -14.145 18.212 78.157 1.00 92.23 S ATOM 53 CE MET 218 -14.387 16.751 79.206 1.00 92.23 C ATOM 54 C MET 218 -18.406 20.264 77.918 1.00 92.23 C ATOM 55 O MET 218 -19.048 19.418 78.540 1.00 92.23 O ATOM 56 N ASP 219 -18.316 21.540 78.339 1.00 25.69 N ATOM 57 CA ASP 219 -18.953 21.909 79.570 1.00 25.69 C ATOM 58 CB ASP 219 -18.734 23.380 79.970 1.00 25.69 C ATOM 59 CG ASP 219 -17.328 23.511 80.545 1.00 25.69 C ATOM 60 OD1 ASP 219 -16.607 22.480 80.603 1.00 25.69 O ATOM 61 OD2 ASP 219 -16.964 24.645 80.954 1.00 25.69 O ATOM 62 C ASP 219 -20.422 21.688 79.424 1.00 25.69 C ATOM 63 O ASP 219 -21.073 21.189 80.340 1.00 25.69 O ATOM 64 N ALA 220 -20.977 22.040 78.249 1.00 19.40 N ATOM 65 CA ALA 220 -22.385 21.896 78.023 1.00 19.40 C ATOM 66 CB ALA 220 -22.818 22.421 76.643 1.00 19.40 C ATOM 67 C ALA 220 -22.749 20.444 78.095 1.00 19.40 C ATOM 68 O ALA 220 -23.767 20.078 78.681 1.00 19.40 O ATOM 69 N CYS 221 -21.907 19.578 77.501 1.00 24.61 N ATOM 70 CA CYS 221 -22.164 18.167 77.462 1.00 24.61 C ATOM 71 CB CYS 221 -21.138 17.392 76.621 1.00 24.61 C ATOM 72 SG CYS 221 -21.247 17.815 74.858 1.00 24.61 S ATOM 73 C CYS 221 -22.131 17.607 78.845 1.00 24.61 C ATOM 74 O CYS 221 -22.939 16.746 79.188 1.00 24.61 O ATOM 75 N ALA 222 -21.197 18.089 79.685 1.00 17.94 N ATOM 76 CA ALA 222 -21.081 17.561 81.011 1.00 17.94 C ATOM 77 CB ALA 222 -19.984 18.254 81.838 1.00 17.94 C ATOM 78 C ALA 222 -22.376 17.812 81.706 1.00 17.94 C ATOM 79 O ALA 222 -22.887 16.955 82.424 1.00 17.94 O ATOM 80 N GLU 223 -22.945 19.007 81.490 1.00 32.70 N ATOM 81 CA GLU 223 -24.174 19.369 82.125 1.00 32.70 C ATOM 82 CB GLU 223 -24.562 20.823 81.812 1.00 32.70 C ATOM 83 CG GLU 223 -23.559 21.812 82.419 1.00 32.70 C ATOM 84 CD GLU 223 -23.835 23.212 81.887 1.00 32.70 C ATOM 85 OE1 GLU 223 -25.013 23.652 81.959 1.00 32.70 O ATOM 86 OE2 GLU 223 -22.868 23.857 81.401 1.00 32.70 O ATOM 87 C GLU 223 -25.240 18.439 81.640 1.00 32.70 C ATOM 88 O GLU 223 -26.109 18.025 82.406 1.00 32.70 O ATOM 89 N LEU 224 -25.203 18.075 80.347 1.00 75.77 N ATOM 90 CA LEU 224 -26.196 17.183 79.831 1.00 75.77 C ATOM 91 CB LEU 224 -26.069 16.922 78.323 1.00 75.77 C ATOM 92 CG LEU 224 -27.139 15.944 77.803 1.00 75.77 C ATOM 93 CD1 LEU 224 -28.551 16.529 77.950 1.00 75.77 C ATOM 94 CD2 LEU 224 -26.822 15.472 76.375 1.00 75.77 C ATOM 95 C LEU 224 -26.058 15.862 80.514 1.00 75.77 C ATOM 96 O LEU 224 -27.052 15.243 80.890 1.00 75.77 O ATOM 97 N GLU 225 -24.811 15.396 80.708 1.00 60.83 N ATOM 98 CA GLU 225 -24.633 14.106 81.304 1.00 60.83 C ATOM 99 CB GLU 225 -23.168 13.639 81.379 1.00 60.83 C ATOM 100 CG GLU 225 -22.576 13.314 80.006 1.00 60.83 C ATOM 101 CD GLU 225 -21.295 12.517 80.204 1.00 60.83 C ATOM 102 OE1 GLU 225 -20.321 13.082 80.765 1.00 60.83 O ATOM 103 OE2 GLU 225 -21.282 11.325 79.796 1.00 60.83 O ATOM 104 C GLU 225 -25.179 14.147 82.691 1.00 60.83 C ATOM 105 O GLU 225 -25.765 13.173 83.164 1.00 60.83 O ATOM 106 N SER 226 -25.001 15.291 83.379 1.00 26.90 N ATOM 107 CA SER 226 -25.459 15.414 84.734 1.00 26.90 C ATOM 108 CB SER 226 -25.180 16.806 85.331 1.00 26.90 C ATOM 109 OG SER 226 -23.780 17.039 85.401 1.00 26.90 O ATOM 110 C SER 226 -26.938 15.204 84.742 1.00 26.90 C ATOM 111 O SER 226 -27.470 14.533 85.623 1.00 26.90 O ATOM 112 N ILE 227 -27.646 15.760 83.741 1.00 32.29 N ATOM 113 CA ILE 227 -29.073 15.625 83.689 1.00 32.29 C ATOM 114 CB ILE 227 -29.722 16.375 82.557 1.00 32.29 C ATOM 115 CG2 ILE 227 -31.195 15.937 82.499 1.00 32.29 C ATOM 116 CG1 ILE 227 -29.529 17.894 82.727 1.00 32.29 C ATOM 117 CD1 ILE 227 -29.992 18.721 81.527 1.00 32.29 C ATOM 118 C ILE 227 -29.430 14.183 83.514 1.00 32.29 C ATOM 119 O ILE 227 -30.362 13.692 84.149 1.00 32.29 O ATOM 120 N LEU 228 -28.698 13.457 82.650 1.00 36.97 N ATOM 121 CA LEU 228 -29.058 12.092 82.385 1.00 36.97 C ATOM 122 CB LEU 228 -28.099 11.405 81.394 1.00 36.97 C ATOM 123 CG LEU 228 -28.480 9.948 81.060 1.00 36.97 C ATOM 124 CD1 LEU 228 -29.788 9.891 80.252 1.00 36.97 C ATOM 125 CD2 LEU 228 -27.320 9.204 80.378 1.00 36.97 C ATOM 126 C LEU 228 -28.977 11.312 83.658 1.00 36.97 C ATOM 127 O LEU 228 -29.865 10.518 83.967 1.00 36.97 O ATOM 128 N LYS 229 -27.899 11.525 84.429 1.00 59.41 N ATOM 129 CA LYS 229 -27.666 10.807 85.649 1.00 59.41 C ATOM 130 CB LYS 229 -26.318 11.198 86.282 1.00 59.41 C ATOM 131 CG LYS 229 -25.132 11.082 85.315 1.00 59.41 C ATOM 132 CD LYS 229 -23.851 11.750 85.834 1.00 59.41 C ATOM 133 CE LYS 229 -22.769 11.952 84.770 1.00 59.41 C ATOM 134 NZ LYS 229 -22.699 13.381 84.380 1.00 59.41 N ATOM 135 C LYS 229 -28.738 11.164 86.632 1.00 59.41 C ATOM 136 O LYS 229 -29.287 10.299 87.315 1.00 59.41 O ATOM 137 N ASN 230 -29.078 12.466 86.703 1.00 55.79 N ATOM 138 CA ASN 230 -30.017 12.962 87.666 1.00 55.79 C ATOM 139 CB ASN 230 -30.141 14.493 87.654 1.00 55.79 C ATOM 140 CG ASN 230 -28.861 15.061 88.250 1.00 55.79 C ATOM 141 OD1 ASN 230 -28.257 15.983 87.703 1.00 55.79 O ATOM 142 ND2 ASN 230 -28.432 14.498 89.410 1.00 55.79 N ATOM 143 C ASN 230 -31.369 12.385 87.414 1.00 55.79 C ATOM 144 O ASN 230 -32.109 12.106 88.354 1.00 55.79 O ATOM 145 N ASP 231 -31.741 12.197 86.137 1.00 29.31 N ATOM 146 CA ASP 231 -33.052 11.687 85.862 1.00 29.31 C ATOM 147 CB ASP 231 -33.351 11.570 84.357 1.00 29.31 C ATOM 148 CG ASP 231 -33.561 12.976 83.816 1.00 29.31 C ATOM 149 OD1 ASP 231 -33.714 13.908 84.650 1.00 29.31 O ATOM 150 OD2 ASP 231 -33.579 13.137 82.567 1.00 29.31 O ATOM 151 C ASP 231 -33.193 10.324 86.470 1.00 29.31 C ATOM 152 O ASP 231 -34.214 10.020 87.087 1.00 29.31 O ATOM 153 N LEU 232 -32.165 9.465 86.322 1.00 77.31 N ATOM 154 CA LEU 232 -32.218 8.138 86.870 1.00 77.31 C ATOM 155 CB LEU 232 -30.985 7.285 86.522 1.00 77.31 C ATOM 156 CG LEU 232 -30.840 7.019 85.015 1.00 77.31 C ATOM 157 CD1 LEU 232 -29.662 6.081 84.707 1.00 77.31 C ATOM 158 CD2 LEU 232 -32.167 6.530 84.409 1.00 77.31 C ATOM 159 C LEU 232 -32.273 8.245 88.357 1.00 77.31 C ATOM 160 O LEU 232 -32.998 7.508 89.021 1.00 77.31 O ATOM 161 N LYS 233 -31.493 9.189 88.909 1.00 42.34 N ATOM 162 CA LYS 233 -31.407 9.395 90.324 1.00 42.34 C ATOM 163 CB LYS 233 -30.454 10.545 90.682 1.00 42.34 C ATOM 164 CG LYS 233 -29.014 10.321 90.222 1.00 42.34 C ATOM 165 CD LYS 233 -28.160 11.587 90.280 1.00 42.34 C ATOM 166 CE LYS 233 -26.743 11.390 89.746 1.00 42.34 C ATOM 167 NZ LYS 233 -26.010 12.674 89.791 1.00 42.34 N ATOM 168 C LYS 233 -32.760 9.799 90.813 1.00 42.34 C ATOM 169 O LYS 233 -33.182 9.421 91.904 1.00 42.34 O ATOM 170 N SER 234 -33.474 10.607 90.012 1.00 34.15 N ATOM 171 CA SER 234 -34.763 11.088 90.406 1.00 34.15 C ATOM 172 CB SER 234 -35.378 12.038 89.365 1.00 34.15 C ATOM 173 OG SER 234 -36.654 12.476 89.803 1.00 34.15 O ATOM 174 C SER 234 -35.702 9.934 90.574 1.00 34.15 C ATOM 175 O SER 234 -36.432 9.868 91.562 1.00 34.15 O ATOM 176 N TYR 235 -35.702 8.982 89.620 1.00 91.81 N ATOM 177 CA TYR 235 -36.630 7.889 89.701 1.00 91.81 C ATOM 178 CB TYR 235 -36.616 6.967 88.465 1.00 91.81 C ATOM 179 CG TYR 235 -37.508 5.810 88.765 1.00 91.81 C ATOM 180 CD1 TYR 235 -38.861 5.871 88.511 1.00 91.81 C ATOM 181 CD2 TYR 235 -36.994 4.659 89.316 1.00 91.81 C ATOM 182 CE1 TYR 235 -39.676 4.800 88.800 1.00 91.81 C ATOM 183 CE2 TYR 235 -37.802 3.585 89.608 1.00 91.81 C ATOM 184 CZ TYR 235 -39.146 3.653 89.342 1.00 91.81 C ATOM 185 OH TYR 235 -39.976 2.553 89.640 1.00 91.81 O ATOM 186 C TYR 235 -36.341 7.058 90.912 1.00 91.81 C ATOM 187 O TYR 235 -37.254 6.677 91.644 1.00 91.81 O ATOM 188 N ILE 236 -35.055 6.759 91.168 1.00 79.38 N ATOM 189 CA ILE 236 -34.733 5.950 92.306 1.00 79.38 C ATOM 190 CB ILE 236 -33.272 5.597 92.403 1.00 79.38 C ATOM 191 CG2 ILE 236 -32.457 6.881 92.612 1.00 79.38 C ATOM 192 CG1 ILE 236 -33.050 4.536 93.494 1.00 79.38 C ATOM 193 CD1 ILE 236 -31.658 3.911 93.451 1.00 79.38 C ATOM 194 C ILE 236 -35.133 6.693 93.540 1.00 79.38 C ATOM 195 O ILE 236 -35.675 6.112 94.479 1.00 79.38 O ATOM 196 N ALA 237 -34.883 8.013 93.548 1.00 39.32 N ATOM 197 CA ALA 237 -35.163 8.853 94.674 1.00 39.32 C ATOM 198 CB ALA 237 -34.786 10.323 94.420 1.00 39.32 C ATOM 199 C ALA 237 -36.626 8.813 94.960 1.00 39.32 C ATOM 200 O ALA 237 -37.030 8.779 96.120 1.00 39.32 O ATOM 201 N ASN 238 -37.472 8.803 93.914 1.00 58.29 N ATOM 202 CA ASN 238 -38.882 8.811 94.164 1.00 58.29 C ATOM 203 CB ASN 238 -39.722 8.796 92.882 1.00 58.29 C ATOM 204 CG ASN 238 -39.612 10.183 92.268 1.00 58.29 C ATOM 205 OD1 ASN 238 -39.752 11.193 92.957 1.00 58.29 O ATOM 206 ND2 ASN 238 -39.342 10.237 90.936 1.00 58.29 N ATOM 207 C ASN 238 -39.204 7.591 94.958 1.00 58.29 C ATOM 208 O ASN 238 -39.985 7.644 95.908 1.00 58.29 O ATOM 209 N ASN 239 -38.586 6.451 94.610 1.00 45.13 N ATOM 210 CA ASN 239 -38.874 5.283 95.383 1.00 45.13 C ATOM 211 CB ASN 239 -38.095 4.037 94.916 1.00 45.13 C ATOM 212 CG ASN 239 -38.613 3.597 93.558 1.00 45.13 C ATOM 213 OD1 ASN 239 -38.878 4.417 92.679 1.00 45.13 O ATOM 214 ND2 ASN 239 -38.767 2.258 93.382 1.00 45.13 N ATOM 215 C ASN 239 -38.428 5.528 96.790 1.00 45.13 C ATOM 216 O ASN 239 -39.200 5.357 97.731 1.00 45.13 O ATOM 217 N SER 240 -37.161 5.948 96.971 1.00 60.52 N ATOM 218 CA SER 240 -36.643 6.108 98.302 1.00 60.52 C ATOM 219 CB SER 240 -35.164 6.529 98.328 1.00 60.52 C ATOM 220 OG SER 240 -34.358 5.548 97.693 1.00 60.52 O ATOM 221 C SER 240 -37.382 7.179 99.032 1.00 60.52 C ATOM 222 O SER 240 -38.250 6.911 99.860 1.00 60.52 O ATOM 223 N ASN 241 -37.035 8.440 98.710 1.00153.14 N ATOM 224 CA ASN 241 -37.576 9.598 99.354 1.00153.14 C ATOM 225 CB ASN 241 -37.384 9.589 100.883 1.00153.14 C ATOM 226 CG ASN 241 -35.904 9.423 101.194 1.00153.14 C ATOM 227 OD1 ASN 241 -35.274 8.446 100.792 1.00153.14 O ATOM 228 ND2 ASN 241 -35.330 10.410 101.932 1.00153.14 N ATOM 229 C ASN 241 -36.867 10.773 98.747 1.00153.14 C ATOM 230 O ASN 241 -36.772 10.883 97.526 1.00153.14 O ATOM 231 N ASN 242 -36.358 11.696 99.587 1.00 66.82 N ATOM 232 CA ASN 242 -35.657 12.848 99.093 1.00 66.82 C ATOM 233 CB ASN 242 -35.118 13.744 100.223 1.00 66.82 C ATOM 234 CG ASN 242 -36.295 14.263 101.038 1.00 66.82 C ATOM 235 OD1 ASN 242 -37.091 15.077 100.574 1.00 66.82 O ATOM 236 ND2 ASN 242 -36.414 13.767 102.298 1.00 66.82 N ATOM 237 C ASN 242 -34.478 12.344 98.320 1.00 66.82 C ATOM 238 O ASN 242 -33.902 11.311 98.657 1.00 66.82 O ATOM 239 N ILE 243 -34.093 13.065 97.246 1.00124.89 N ATOM 240 CA ILE 243 -33.006 12.622 96.416 1.00124.89 C ATOM 241 CB ILE 243 -32.971 13.304 95.080 1.00124.89 C ATOM 242 CG2 ILE 243 -32.725 14.803 95.311 1.00124.89 C ATOM 243 CG1 ILE 243 -31.961 12.630 94.142 1.00124.89 C ATOM 244 CD1 ILE 243 -32.120 13.064 92.686 1.00124.89 C ATOM 245 C ILE 243 -31.725 12.885 97.129 1.00124.89 C ATOM 246 O ILE 243 -31.484 13.987 97.616 1.00124.89 O ATOM 247 N ASN 244 -30.867 11.850 97.206 1.00132.07 N ATOM 248 CA ASN 244 -29.631 11.960 97.921 1.00132.07 C ATOM 249 CB ASN 244 -29.495 10.975 99.093 1.00132.07 C ATOM 250 CG ASN 244 -30.468 11.373 100.182 1.00132.07 C ATOM 251 OD1 ASN 244 -31.136 12.397 100.071 1.00132.07 O ATOM 252 ND2 ASN 244 -30.545 10.557 101.267 1.00132.07 N ATOM 253 C ASN 244 -28.519 11.589 97.003 1.00132.07 C ATOM 254 O ASN 244 -28.713 11.289 95.826 1.00132.07 O ATOM 255 N THR 245 -27.298 11.629 97.560 1.00107.92 N ATOM 256 CA THR 245 -26.113 11.247 96.866 1.00107.92 C ATOM 257 CB THR 245 -24.873 11.459 97.675 1.00107.92 C ATOM 258 OG1 THR 245 -24.916 10.670 98.854 1.00107.92 O ATOM 259 CG2 THR 245 -24.776 12.950 98.035 1.00107.92 C ATOM 260 C THR 245 -26.243 9.786 96.595 1.00107.92 C ATOM 261 O THR 245 -25.738 9.288 95.592 1.00107.92 O ATOM 262 N ASP 246 -26.930 9.061 97.501 1.00 47.73 N ATOM 263 CA ASP 246 -27.099 7.647 97.327 1.00 47.73 C ATOM 264 CB ASP 246 -28.079 7.031 98.338 1.00 47.73 C ATOM 265 CG ASP 246 -27.499 7.159 99.735 1.00 47.73 C ATOM 266 OD1 ASP 246 -26.303 7.533 99.851 1.00 47.73 O ATOM 267 OD2 ASP 246 -28.254 6.888 100.707 1.00 47.73 O ATOM 268 C ASP 246 -27.760 7.485 96.003 1.00 47.73 C ATOM 269 O ASP 246 -27.388 6.628 95.203 1.00 47.73 O ATOM 270 N ALA 247 -28.757 8.343 95.744 1.00 37.64 N ATOM 271 CA ALA 247 -29.472 8.331 94.505 1.00 37.64 C ATOM 272 CB ALA 247 -30.597 9.379 94.461 1.00 37.64 C ATOM 273 C ALA 247 -28.506 8.654 93.415 1.00 37.64 C ATOM 274 O ALA 247 -28.592 8.111 92.322 1.00 37.64 O ATOM 275 N VAL 248 -27.560 9.571 93.661 1.00 39.32 N ATOM 276 CA VAL 248 -26.635 9.896 92.619 1.00 39.32 C ATOM 277 CB VAL 248 -25.646 10.937 93.054 1.00 39.32 C ATOM 278 CG1 VAL 248 -24.617 11.140 91.931 1.00 39.32 C ATOM 279 CG2 VAL 248 -26.404 12.213 93.458 1.00 39.32 C ATOM 280 C VAL 248 -25.844 8.674 92.263 1.00 39.32 C ATOM 281 O VAL 248 -25.734 8.319 91.091 1.00 39.32 O ATOM 282 N LEU 249 -25.309 7.972 93.280 1.00 49.58 N ATOM 283 CA LEU 249 -24.416 6.870 93.047 1.00 49.58 C ATOM 284 CB LEU 249 -23.753 6.324 94.322 1.00 49.58 C ATOM 285 CG LEU 249 -22.770 7.322 94.954 1.00 49.58 C ATOM 286 CD1 LEU 249 -21.964 6.665 96.084 1.00 49.58 C ATOM 287 CD2 LEU 249 -21.880 7.973 93.882 1.00 49.58 C ATOM 288 C LEU 249 -25.074 5.725 92.345 1.00 49.58 C ATOM 289 O LEU 249 -24.460 5.119 91.469 1.00 49.58 O ATOM 290 N ASN 250 -26.328 5.373 92.691 1.00 79.74 N ATOM 291 CA ASN 250 -26.877 4.214 92.046 1.00 79.74 C ATOM 292 CB ASN 250 -28.241 3.785 92.614 1.00 79.74 C ATOM 293 CG ASN 250 -27.998 3.267 94.024 1.00 79.74 C ATOM 294 OD1 ASN 250 -27.053 3.672 94.698 1.00 79.74 O ATOM 295 ND2 ASN 250 -28.873 2.333 94.484 1.00 79.74 N ATOM 296 C ASN 250 -26.964 4.460 90.565 1.00 79.74 C ATOM 297 O ASN 250 -26.521 3.614 89.790 1.00 79.74 O ATOM 298 N PRO 251 -27.502 5.565 90.116 1.00136.12 N ATOM 299 CA PRO 251 -27.416 5.810 88.708 1.00136.12 C ATOM 300 CD PRO 251 -28.822 5.941 90.592 1.00136.12 C ATOM 301 CB PRO 251 -28.391 6.942 88.421 1.00136.12 C ATOM 302 CG PRO 251 -29.519 6.661 89.426 1.00136.12 C ATOM 303 C PRO 251 -26.007 6.019 88.251 1.00136.12 C ATOM 304 O PRO 251 -25.744 5.872 87.060 1.00136.12 O ATOM 305 N VAL 252 -25.081 6.391 89.150 1.00 32.29 N ATOM 306 CA VAL 252 -23.729 6.503 88.693 1.00 32.29 C ATOM 307 CB VAL 252 -22.766 6.905 89.775 1.00 32.29 C ATOM 308 CG1 VAL 252 -21.337 6.794 89.219 1.00 32.29 C ATOM 309 CG2 VAL 252 -23.116 8.319 90.270 1.00 32.29 C ATOM 310 C VAL 252 -23.324 5.135 88.249 1.00 32.29 C ATOM 311 O VAL 252 -22.783 4.953 87.160 1.00 32.29 O ATOM 312 N VAL 253 -23.608 4.131 89.098 1.00 21.93 N ATOM 313 CA VAL 253 -23.242 2.776 88.809 1.00 21.93 C ATOM 314 CB VAL 253 -23.554 1.832 89.931 1.00 21.93 C ATOM 315 CG1 VAL 253 -23.210 0.403 89.476 1.00 21.93 C ATOM 316 CG2 VAL 253 -22.780 2.286 91.179 1.00 21.93 C ATOM 317 C VAL 253 -24.003 2.303 87.613 1.00 21.93 C ATOM 318 O VAL 253 -23.439 1.665 86.724 1.00 21.93 O ATOM 319 N THR 254 -25.312 2.623 87.550 1.00 78.73 N ATOM 320 CA THR 254 -26.112 2.143 86.460 1.00 78.73 C ATOM 321 CB THR 254 -27.539 2.607 86.505 1.00 78.73 C ATOM 322 OG1 THR 254 -28.325 1.850 85.602 1.00 78.73 O ATOM 323 CG2 THR 254 -27.588 4.090 86.101 1.00 78.73 C ATOM 324 C THR 254 -25.514 2.614 85.138 1.00 78.73 C ATOM 325 O THR 254 -26.034 2.181 84.074 1.00 78.73 O ATOM 326 OXT THR 254 -24.537 3.408 85.165 1.00 78.73 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 325 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 43.27 84.9 86 24.6 350 ARMSMC SECONDARY STRUCTURE . . 7.40 100.0 67 29.4 228 ARMSMC SURFACE . . . . . . . . 46.97 82.4 51 24.5 208 ARMSMC BURIED . . . . . . . . 37.23 88.6 35 24.6 142 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 83.45 47.4 38 26.0 146 ARMSSC1 RELIABLE SIDE CHAINS . 86.19 44.1 34 24.8 137 ARMSSC1 SECONDARY STRUCTURE . . 82.02 46.4 28 29.8 94 ARMSSC1 SURFACE . . . . . . . . 77.64 54.5 22 24.4 90 ARMSSC1 BURIED . . . . . . . . 90.83 37.5 16 28.6 56 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 53.45 65.4 26 24.1 108 ARMSSC2 RELIABLE SIDE CHAINS . 31.66 85.7 14 18.9 74 ARMSSC2 SECONDARY STRUCTURE . . 47.73 68.4 19 27.9 68 ARMSSC2 SURFACE . . . . . . . . 56.34 53.3 15 21.7 69 ARMSSC2 BURIED . . . . . . . . 49.23 81.8 11 28.2 39 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 74.39 33.3 6 21.4 28 ARMSSC3 RELIABLE SIDE CHAINS . 74.39 33.3 6 25.0 24 ARMSSC3 SECONDARY STRUCTURE . . 74.39 33.3 6 26.1 23 ARMSSC3 SURFACE . . . . . . . . 58.21 50.0 4 18.2 22 ARMSSC3 BURIED . . . . . . . . 99.13 0.0 2 33.3 6 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 35.21 50.0 2 15.4 13 ARMSSC4 RELIABLE SIDE CHAINS . 35.21 50.0 2 15.4 13 ARMSSC4 SECONDARY STRUCTURE . . 35.21 50.0 2 20.0 10 ARMSSC4 SURFACE . . . . . . . . 35.21 50.0 2 22.2 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 6.58 (Number of atoms: 44) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 6.58 44 25.0 176 CRMSCA CRN = ALL/NP . . . . . 0.1496 CRMSCA SECONDARY STRUCTURE . . 6.33 34 29.8 114 CRMSCA SURFACE . . . . . . . . 7.29 26 24.8 105 CRMSCA BURIED . . . . . . . . 5.40 18 25.4 71 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 6.63 220 25.2 873 CRMSMC SECONDARY STRUCTURE . . 6.36 170 30.0 567 CRMSMC SURFACE . . . . . . . . 7.31 130 25.0 521 CRMSMC BURIED . . . . . . . . 5.50 90 25.6 352 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 8.01 149 23.2 643 CRMSSC RELIABLE SIDE CHAINS . 7.85 117 21.5 543 CRMSSC SECONDARY STRUCTURE . . 7.65 114 27.7 412 CRMSSC SURFACE . . . . . . . . 8.77 85 21.4 398 CRMSSC BURIED . . . . . . . . 6.87 64 26.1 245 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 7.19 325 24.1 1347 CRMSALL SECONDARY STRUCTURE . . 6.88 250 28.8 868 CRMSALL SURFACE . . . . . . . . 7.85 189 23.1 818 CRMSALL BURIED . . . . . . . . 6.16 136 25.7 529 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 53.485 0.774 0.801 44 25.0 176 ERRCA SECONDARY STRUCTURE . . 46.111 0.757 0.788 34 29.8 114 ERRCA SURFACE . . . . . . . . 51.030 0.749 0.781 26 24.8 105 ERRCA BURIED . . . . . . . . 57.030 0.810 0.830 18 25.4 71 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 53.491 0.775 0.802 220 25.2 873 ERRMC SECONDARY STRUCTURE . . 46.115 0.758 0.789 170 30.0 567 ERRMC SURFACE . . . . . . . . 51.097 0.753 0.785 130 25.0 521 ERRMC BURIED . . . . . . . . 56.948 0.806 0.828 90 25.6 352 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 57.566 0.759 0.789 149 23.2 643 ERRSC RELIABLE SIDE CHAINS . 57.182 0.762 0.792 117 21.5 543 ERRSC SECONDARY STRUCTURE . . 50.703 0.745 0.778 114 27.7 412 ERRSC SURFACE . . . . . . . . 53.095 0.731 0.767 85 21.4 398 ERRSC BURIED . . . . . . . . 63.505 0.796 0.819 64 26.1 245 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 55.464 0.771 0.799 325 24.1 1347 ERRALL SECONDARY STRUCTURE . . 48.307 0.756 0.787 250 28.8 868 ERRALL SURFACE . . . . . . . . 52.149 0.748 0.780 189 23.1 818 ERRALL BURIED . . . . . . . . 60.072 0.803 0.825 136 25.7 529 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 3 12 39 44 176 DISTCA CA (P) 0.00 0.00 1.70 6.82 22.16 176 DISTCA CA (RMS) 0.00 0.00 2.61 3.67 5.81 DISTCA ALL (N) 0 2 21 87 283 325 1347 DISTALL ALL (P) 0.00 0.15 1.56 6.46 21.01 1347 DISTALL ALL (RMS) 0.00 1.98 2.49 3.82 6.21 DISTALL END of the results output