####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 58 ( 288), selected 58 , name T0531TS470_1-D1 # Molecule2: number of CA atoms 58 ( 1017), selected 58 , name T0531-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0531TS470_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 32 32 - 63 4.81 15.31 LCS_AVERAGE: 44.53 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 37 - 48 1.37 16.32 LCS_AVERAGE: 12.78 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 40 - 46 1.00 15.97 LONGEST_CONTINUOUS_SEGMENT: 7 42 - 48 0.84 16.58 LCS_AVERAGE: 8.20 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 58 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT E 6 E 6 4 5 19 3 4 4 5 7 9 10 12 15 15 17 17 18 19 20 21 22 24 26 28 LCS_GDT F 7 F 7 4 5 19 3 4 4 5 6 8 10 12 15 15 17 17 18 19 19 21 24 24 26 28 LCS_GDT P 8 P 8 4 5 19 3 4 4 5 6 8 10 12 15 15 17 17 18 19 20 21 24 24 26 28 LCS_GDT C 9 C 9 4 5 19 3 4 4 5 6 6 10 11 15 15 17 17 18 19 21 21 24 25 26 28 LCS_GDT W 10 W 10 3 5 19 0 3 4 5 7 9 10 12 15 15 17 19 21 22 24 26 27 27 29 30 LCS_GDT L 11 L 11 3 4 19 3 3 3 4 5 8 10 12 15 15 17 19 21 22 24 26 27 27 29 30 LCS_GDT V 12 V 12 3 8 19 3 3 3 4 7 8 10 12 13 15 17 19 21 22 24 26 27 27 29 30 LCS_GDT E 13 E 13 6 8 19 4 5 6 6 7 8 10 12 15 15 17 19 21 22 24 26 27 27 29 30 LCS_GDT E 14 E 14 6 8 19 4 5 6 6 7 9 10 12 15 15 17 17 20 22 23 26 27 27 29 30 LCS_GDT F 15 F 15 6 8 19 4 5 6 6 7 9 10 12 15 15 17 17 18 22 23 26 27 27 29 30 LCS_GDT V 16 V 16 6 8 19 3 5 6 6 7 9 10 12 15 15 17 17 18 20 21 21 24 25 26 28 LCS_GDT V 17 V 17 6 8 19 4 5 6 6 7 9 10 12 15 17 20 22 22 22 22 25 26 27 28 28 LCS_GDT A 18 A 18 6 8 19 3 5 6 7 7 9 12 15 17 18 21 22 23 26 26 27 28 29 30 30 LCS_GDT E 19 E 19 4 8 19 3 4 5 7 7 9 10 12 15 15 17 17 18 20 22 27 28 29 30 30 LCS_GDT E 20 E 20 5 7 19 3 5 6 7 7 9 10 12 15 15 17 17 18 20 21 22 24 26 27 28 LCS_GDT C 21 C 21 5 7 19 3 5 6 7 7 7 8 9 11 14 17 17 18 20 21 21 24 25 26 28 LCS_GDT S 22 S 22 5 7 19 3 4 6 7 7 7 8 9 11 14 17 17 18 20 21 21 24 25 26 28 LCS_GDT P 23 P 23 5 7 19 3 5 6 7 7 7 8 9 10 13 15 16 18 20 21 21 24 25 26 28 LCS_GDT C 24 C 24 5 7 19 0 5 6 7 7 7 8 9 10 13 15 16 17 20 21 21 24 25 26 28 LCS_GDT S 25 S 25 4 4 17 3 3 4 4 5 7 7 9 10 13 15 16 17 20 21 21 24 25 26 28 LCS_GDT N 26 N 26 4 4 17 3 3 4 4 5 7 7 8 9 13 15 16 21 22 24 26 27 27 29 30 LCS_GDT F 27 F 27 3 4 17 3 3 3 4 7 7 8 10 12 14 17 19 21 22 24 26 27 27 29 30 LCS_GDT R 28 R 28 3 4 17 3 3 3 4 5 7 8 9 12 14 17 19 21 22 24 26 27 27 29 30 LCS_GDT A 29 A 29 3 3 11 1 3 3 3 4 7 8 10 12 14 17 19 21 22 24 26 27 27 29 30 LCS_GDT K 30 K 30 3 5 13 3 3 3 4 5 5 6 7 10 15 17 19 21 22 24 26 27 27 29 30 LCS_GDT T 31 T 31 4 5 21 3 4 4 4 5 6 8 11 13 15 18 19 22 23 29 31 32 33 33 33 LCS_GDT T 32 T 32 4 5 32 3 4 4 4 5 10 11 12 15 19 21 27 29 31 32 32 32 33 33 33 LCS_GDT P 33 P 33 4 5 32 3 4 4 4 7 10 11 12 15 19 21 27 29 31 32 32 32 33 33 33 LCS_GDT E 34 E 34 4 8 32 0 4 4 4 8 13 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT C 35 C 35 3 8 32 3 3 6 7 12 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT G 36 G 36 4 8 32 3 4 4 5 6 9 12 15 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT P 37 P 37 5 12 32 3 5 7 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT T 38 T 38 5 12 32 5 9 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT G 39 G 39 5 12 32 5 9 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT Y 40 Y 40 7 12 32 5 9 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT V 41 V 41 7 12 32 3 5 7 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT E 42 E 42 7 12 32 3 9 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT K 43 K 43 7 12 32 4 9 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT I 44 I 44 7 12 32 4 6 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT T 45 T 45 7 12 32 4 9 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT C 46 C 46 7 12 32 5 9 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT S 47 S 47 7 12 32 5 9 10 11 13 15 16 19 21 23 24 27 29 31 32 32 32 33 33 33 LCS_GDT S 48 S 48 7 12 32 3 6 8 11 13 15 16 19 21 22 24 27 29 31 32 32 32 33 33 33 LCS_GDT S 49 S 49 4 9 32 3 4 5 5 7 11 16 18 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT K 50 K 50 4 7 32 3 3 5 5 7 10 11 13 20 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT R 51 R 51 4 7 32 4 4 4 6 7 10 13 15 17 22 25 27 29 31 32 32 32 33 33 33 LCS_GDT N 52 N 52 4 7 32 4 5 6 6 7 10 13 13 16 18 21 22 28 31 32 32 32 33 33 33 LCS_GDT E 53 E 53 4 7 32 4 4 5 6 7 10 13 15 17 22 25 27 29 31 32 32 32 33 33 33 LCS_GDT F 54 F 54 4 7 32 4 4 4 6 7 9 13 15 17 18 21 22 28 31 32 32 32 33 33 33 LCS_GDT K 55 K 55 5 7 32 3 5 5 6 7 10 13 15 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT S 56 S 56 5 7 32 3 5 5 6 7 10 13 15 17 22 25 27 29 31 32 32 32 33 33 33 LCS_GDT C 57 C 57 5 7 32 3 5 5 6 7 10 13 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT R 58 R 58 5 7 32 3 5 5 6 7 9 13 15 18 22 24 25 27 30 32 32 32 33 33 33 LCS_GDT S 59 S 59 5 7 32 2 5 5 6 9 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT A 60 A 60 4 4 32 3 4 4 4 7 12 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT L 61 L 61 4 4 32 5 9 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT M 62 M 62 4 4 32 3 4 4 4 5 8 9 14 19 23 25 27 29 31 32 32 32 33 33 33 LCS_GDT E 63 E 63 4 4 32 3 4 5 6 12 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 LCS_AVERAGE LCS_A: 21.84 ( 8.20 12.78 44.53 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 9 10 11 13 15 16 19 21 23 25 27 29 31 32 32 32 33 33 33 GDT PERCENT_AT 8.62 15.52 17.24 18.97 22.41 25.86 27.59 32.76 36.21 39.66 43.10 46.55 50.00 53.45 55.17 55.17 55.17 56.90 56.90 56.90 GDT RMS_LOCAL 0.37 0.63 0.72 1.04 1.34 1.76 1.98 2.55 2.96 3.54 3.96 4.05 4.38 4.68 4.81 4.81 4.81 5.12 5.12 5.12 GDT RMS_ALL_AT 16.38 16.48 16.50 16.50 16.37 16.13 16.09 15.87 15.81 15.64 15.58 15.62 15.36 15.34 15.31 15.31 15.31 15.19 15.19 15.19 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA E 6 E 6 30.220 4 0.613 0.549 30.827 0.000 0.000 LGA F 7 F 7 26.004 6 0.148 0.198 27.594 0.000 0.000 LGA P 8 P 8 21.375 2 0.185 0.237 22.983 0.000 0.000 LGA C 9 C 9 20.441 1 0.583 0.579 21.003 0.000 0.000 LGA W 10 W 10 16.950 9 0.663 0.621 18.832 0.000 0.000 LGA L 11 L 11 17.423 3 0.632 0.569 17.616 0.000 0.000 LGA V 12 V 12 17.665 2 0.172 0.181 18.536 0.000 0.000 LGA E 13 E 13 20.514 4 0.627 0.605 21.869 0.000 0.000 LGA E 14 E 14 21.046 4 0.219 0.243 23.569 0.000 0.000 LGA F 15 F 15 15.212 6 0.102 0.137 17.595 0.000 0.000 LGA V 16 V 16 15.739 2 0.060 0.082 17.301 0.000 0.000 LGA V 17 V 17 13.229 2 0.181 0.216 15.954 0.000 0.000 LGA A 18 A 18 11.692 0 0.644 0.598 11.692 0.000 0.000 LGA E 19 E 19 12.682 4 0.129 0.166 13.600 0.000 0.000 LGA E 20 E 20 15.634 4 0.035 0.044 16.738 0.000 0.000 LGA C 21 C 21 20.226 1 0.050 0.069 22.539 0.000 0.000 LGA S 22 S 22 23.563 1 0.046 0.061 26.462 0.000 0.000 LGA P 23 P 23 30.015 2 0.656 0.604 31.028 0.000 0.000 LGA C 24 C 24 32.036 1 0.609 0.545 35.602 0.000 0.000 LGA S 25 S 25 33.374 1 0.640 0.641 34.679 0.000 0.000 LGA N 26 N 26 35.951 3 0.066 0.069 38.134 0.000 0.000 LGA F 27 F 27 30.678 6 0.626 0.570 32.424 0.000 0.000 LGA R 28 R 28 24.266 6 0.604 0.584 26.702 0.000 0.000 LGA A 29 A 29 22.250 0 0.584 0.545 23.153 0.000 0.000 LGA K 30 K 30 21.959 4 0.655 0.596 22.975 0.000 0.000 LGA T 31 T 31 15.821 2 0.589 0.549 17.718 0.000 0.000 LGA T 32 T 32 10.189 2 0.120 0.139 12.342 0.119 0.136 LGA P 33 P 33 9.485 2 0.654 0.587 10.488 3.214 1.837 LGA E 34 E 34 4.114 4 0.664 0.628 5.683 33.333 21.164 LGA C 35 C 35 2.714 1 0.505 0.497 5.539 43.214 39.603 LGA G 36 G 36 5.599 0 0.554 0.554 5.599 34.762 34.762 LGA P 37 P 37 1.682 2 0.106 0.144 2.930 69.048 51.088 LGA T 38 T 38 1.632 2 0.136 0.139 2.439 75.238 52.245 LGA G 39 G 39 1.674 0 0.069 0.069 1.749 75.000 75.000 LGA Y 40 Y 40 1.556 7 0.070 0.103 1.683 77.143 31.786 LGA V 41 V 41 2.145 2 0.015 0.020 3.258 68.810 46.463 LGA E 42 E 42 2.191 4 0.058 0.076 3.234 68.810 36.138 LGA K 43 K 43 2.399 4 0.187 0.225 3.775 57.500 32.751 LGA I 44 I 44 2.560 3 0.056 0.078 2.886 69.048 41.667 LGA T 45 T 45 2.173 2 0.009 0.018 2.978 64.881 45.238 LGA C 46 C 46 0.959 1 0.012 0.017 1.308 85.952 72.381 LGA S 47 S 47 0.724 1 0.582 0.527 2.539 82.143 69.841 LGA S 48 S 48 1.543 1 0.581 0.526 4.688 58.929 45.476 LGA S 49 S 49 6.409 1 0.330 0.340 9.991 16.429 11.429 LGA K 50 K 50 9.473 4 0.367 0.342 12.789 2.143 0.952 LGA R 51 R 51 10.197 6 0.431 0.429 10.879 0.357 0.130 LGA N 52 N 52 11.736 3 0.168 0.224 13.562 0.000 0.000 LGA E 53 E 53 9.602 4 0.011 0.012 10.869 0.119 0.847 LGA F 54 F 54 10.989 6 0.252 0.315 13.458 0.714 0.260 LGA K 55 K 55 6.387 4 0.096 0.129 8.404 10.000 8.571 LGA S 56 S 56 7.057 1 0.113 0.160 9.804 21.190 14.206 LGA C 57 C 57 4.225 1 0.071 0.105 6.673 25.833 28.016 LGA R 58 R 58 8.013 6 0.577 0.526 10.343 11.310 4.113 LGA S 59 S 59 2.872 1 0.634 0.583 4.598 48.929 44.762 LGA A 60 A 60 4.218 0 0.662 0.599 6.686 50.595 43.143 LGA L 61 L 61 2.031 3 0.060 0.062 4.883 59.167 36.726 LGA M 62 M 62 5.911 3 0.089 0.095 7.792 27.024 14.405 LGA E 63 E 63 3.270 4 0.532 0.483 3.992 50.357 27.196 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 58 232 232 100.00 453 288 63.58 58 SUMMARY(RMSD_GDC): 12.315 12.297 12.349 22.264 16.075 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 58 58 4.0 19 2.55 30.603 26.812 0.716 LGA_LOCAL RMSD: 2.554 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.869 Number of assigned atoms: 58 Std_ASGN_ATOMS RMSD: 12.315 Standard rmsd on all 58 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.931275 * X + -0.092370 * Y + 0.352412 * Z + -3.551154 Y_new = -0.279119 * X + 0.802569 * Y + -0.527233 * Z + 9.649052 Z_new = -0.234134 * X + -0.589364 * Y + -0.773195 * Z + -4.632201 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.850395 0.236328 -2.490301 [DEG: -163.3156 13.5406 -142.6837 ] ZXZ: 0.589213 2.454661 -2.763446 [DEG: 33.7594 140.6417 -158.3338 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0531TS470_1-D1 REMARK 2: T0531-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0531TS470_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 58 58 4.0 19 2.55 26.812 12.32 REMARK ---------------------------------------------------------- MOLECULE T0531TS470_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0531 REMARK MODEL 1 REMARK PARENT N/A ATOM 26 N GLU 6 1.022 18.078 -3.903 1.00 7.51 N ATOM 27 CA GLU 6 0.689 18.688 -2.622 1.00 7.51 C ATOM 28 C GLU 6 0.460 17.630 -1.551 1.00 7.51 C ATOM 29 O GLU 6 0.458 17.932 -0.356 1.00 7.51 O ATOM 30 CB GLU 6 -0.537 19.578 -2.762 1.00 7.51 C ATOM 31 N PHE 7 0.267 16.389 -1.984 1.00 6.69 N ATOM 32 CA PHE 7 0.037 15.283 -1.061 1.00 6.69 C ATOM 33 C PHE 7 1.259 14.377 -0.972 1.00 6.69 C ATOM 34 O PHE 7 1.792 13.936 -1.990 1.00 6.69 O ATOM 35 CB PHE 7 -1.187 14.486 -1.485 1.00 6.69 C ATOM 36 N PRO 8 1.697 14.103 0.251 1.00 6.60 N ATOM 37 CA PRO 8 2.858 13.248 0.476 1.00 6.60 C ATOM 38 C PRO 8 2.653 11.871 -0.139 1.00 6.60 C ATOM 39 O PRO 8 1.559 11.310 -0.082 1.00 6.60 O ATOM 40 CB PRO 8 3.147 13.130 1.964 1.00 6.60 C ATOM 41 N CYS 9 3.714 11.329 -0.728 1.00 6.25 N ATOM 42 CA CYS 9 3.653 10.014 -1.355 1.00 6.25 C ATOM 43 C CYS 9 4.330 8.958 -0.490 1.00 6.25 C ATOM 44 O CYS 9 4.524 9.156 0.710 1.00 6.25 O ATOM 45 CB CYS 9 4.288 10.055 -2.737 1.00 6.25 C ATOM 46 N TRP 10 4.688 7.837 -1.105 1.00 5.88 N ATOM 47 CA TRP 10 5.344 6.747 -0.392 1.00 5.88 C ATOM 48 C TRP 10 6.635 6.333 -1.087 1.00 5.88 C ATOM 49 O TRP 10 6.910 6.754 -2.210 1.00 5.88 O ATOM 50 CB TRP 10 4.405 5.558 -0.260 1.00 5.88 C ATOM 51 N LEU 11 7.424 5.504 -0.412 1.00 6.15 N ATOM 52 CA LEU 11 8.688 5.030 -0.963 1.00 6.15 C ATOM 53 C LEU 11 8.714 3.510 -1.055 1.00 6.15 C ATOM 54 O LEU 11 8.459 2.814 -0.071 1.00 6.15 O ATOM 55 CB LEU 11 9.854 5.532 -0.124 1.00 6.15 C ATOM 56 N VAL 12 9.022 2.999 -2.242 1.00 6.25 N ATOM 57 CA VAL 12 9.081 1.559 -2.465 1.00 6.25 C ATOM 58 C VAL 12 10.163 0.913 -1.609 1.00 6.25 C ATOM 59 O VAL 12 10.000 -0.208 -1.128 1.00 6.25 O ATOM 60 CB VAL 12 9.319 1.260 -3.937 1.00 6.25 C ATOM 61 N GLU 13 11.267 1.627 -1.421 1.00 6.34 N ATOM 62 CA GLU 13 12.379 1.125 -0.622 1.00 6.34 C ATOM 63 C GLU 13 11.959 0.902 0.825 1.00 6.34 C ATOM 64 O GLU 13 12.471 0.008 1.499 1.00 6.34 O ATOM 65 CB GLU 13 13.558 2.083 -0.693 1.00 6.34 C ATOM 66 N GLU 14 11.027 1.722 1.299 1.00 5.49 N ATOM 67 CA GLU 14 10.537 1.616 2.668 1.00 5.49 C ATOM 68 C GLU 14 9.108 1.088 2.702 1.00 5.49 C ATOM 69 O GLU 14 8.153 1.860 2.779 1.00 5.49 O ATOM 70 CB GLU 14 10.623 2.963 3.367 1.00 5.49 C ATOM 71 N PHE 15 8.969 -0.232 2.647 1.00 5.28 N ATOM 72 CA PHE 15 7.656 -0.867 2.671 1.00 5.28 C ATOM 73 C PHE 15 7.278 -1.294 4.083 1.00 5.28 C ATOM 74 O PHE 15 8.068 -1.927 4.783 1.00 5.28 O ATOM 75 CB PHE 15 7.626 -2.059 1.728 1.00 5.28 C ATOM 76 N VAL 16 6.065 -0.944 4.497 1.00 5.39 N ATOM 77 CA VAL 16 5.579 -1.290 5.827 1.00 5.39 C ATOM 78 C VAL 16 4.219 -1.974 5.756 1.00 5.39 C ATOM 79 O VAL 16 3.303 -1.487 5.093 1.00 5.39 O ATOM 80 CB VAL 16 5.506 -0.051 6.705 1.00 5.39 C ATOM 81 N VAL 17 4.093 -3.103 6.443 1.00 5.37 N ATOM 82 CA VAL 17 2.819 -3.806 6.536 1.00 5.37 C ATOM 83 C VAL 17 2.062 -3.409 7.795 1.00 5.37 C ATOM 84 O VAL 17 2.627 -3.379 8.888 1.00 5.37 O ATOM 85 CB VAL 17 3.040 -5.311 6.500 1.00 5.37 C ATOM 86 N ALA 18 0.777 -3.107 7.637 1.00 5.22 N ATOM 87 CA ALA 18 -0.094 -2.841 8.775 1.00 5.22 C ATOM 88 C ALA 18 -1.273 -3.805 8.804 1.00 5.22 C ATOM 89 O ALA 18 -1.764 -4.230 7.758 1.00 5.22 O ATOM 90 CB ALA 18 -0.584 -1.401 8.743 1.00 5.22 C ATOM 91 N GLU 19 -1.722 -4.146 10.007 1.00 5.47 N ATOM 92 CA GLU 19 -2.865 -5.037 10.172 1.00 5.47 C ATOM 93 C GLU 19 -4.013 -4.333 10.884 1.00 5.47 C ATOM 94 O GLU 19 -3.798 -3.567 11.824 1.00 5.47 O ATOM 95 CB GLU 19 -2.456 -6.288 10.934 1.00 5.47 C ATOM 96 N GLU 20 -5.234 -4.594 10.429 1.00 5.28 N ATOM 97 CA GLU 20 -6.428 -4.193 11.164 1.00 5.28 C ATOM 98 C GLU 20 -7.374 -5.369 11.363 1.00 5.28 C ATOM 99 O GLU 20 -7.445 -6.270 10.527 1.00 5.28 O ATOM 100 CB GLU 20 -7.136 -3.056 10.442 1.00 5.28 C ATOM 101 N CYS 21 -8.100 -5.356 12.475 1.00 5.72 N ATOM 102 CA CYS 21 -9.061 -6.411 12.776 1.00 5.72 C ATOM 103 C CYS 21 -10.387 -5.829 13.250 1.00 5.72 C ATOM 104 O CYS 21 -10.418 -4.975 14.135 1.00 5.72 O ATOM 105 CB CYS 21 -8.495 -7.363 13.816 1.00 5.72 C ATOM 106 N SER 22 -11.479 -6.299 12.656 1.00 6.33 N ATOM 107 CA SER 22 -12.812 -5.845 13.035 1.00 6.33 C ATOM 108 C SER 22 -13.287 -6.532 14.309 1.00 6.33 C ATOM 109 O SER 22 -12.880 -7.655 14.608 1.00 6.33 O ATOM 110 CB SER 22 -13.796 -6.085 11.902 1.00 6.33 C ATOM 111 N PRO 23 -14.150 -5.852 15.056 1.00 7.46 N ATOM 112 CA PRO 23 -14.647 -6.378 16.322 1.00 7.46 C ATOM 113 C PRO 23 -15.583 -7.559 16.098 1.00 7.46 C ATOM 114 O PRO 23 -16.120 -8.125 17.050 1.00 7.46 O ATOM 115 CB PRO 23 -15.351 -5.283 17.109 1.00 7.46 C ATOM 116 N CYS 24 -15.773 -7.925 14.836 1.00 7.35 N ATOM 117 CA CYS 24 -16.525 -9.127 14.491 1.00 7.35 C ATOM 118 C CYS 24 -15.621 -10.353 14.463 1.00 7.35 C ATOM 119 O CYS 24 -16.097 -11.487 14.466 1.00 7.35 O ATOM 120 CB CYS 24 -17.224 -8.950 13.153 1.00 7.35 C ATOM 121 N SER 25 -14.313 -10.117 14.435 1.00 7.70 N ATOM 122 CA SER 25 -13.342 -11.198 14.322 1.00 7.70 C ATOM 123 C SER 25 -13.434 -11.881 12.963 1.00 7.70 C ATOM 124 O SER 25 -13.051 -13.041 12.814 1.00 7.70 O ATOM 125 CB SER 25 -13.541 -12.209 15.440 1.00 7.70 C ATOM 126 N ASN 26 -13.943 -11.153 11.975 1.00 7.43 N ATOM 127 CA ASN 26 -14.150 -11.709 10.643 1.00 7.43 C ATOM 128 C ASN 26 -13.520 -10.827 9.573 1.00 7.43 C ATOM 129 O ASN 26 -12.805 -11.313 8.696 1.00 7.43 O ATOM 130 CB ASN 26 -15.635 -11.895 10.371 1.00 7.43 C ATOM 131 N PHE 27 -13.787 -9.529 9.651 1.00 7.47 N ATOM 132 CA PHE 27 -13.211 -8.570 8.716 1.00 7.47 C ATOM 133 C PHE 27 -11.784 -8.207 9.109 1.00 7.47 C ATOM 134 O PHE 27 -11.531 -7.778 10.234 1.00 7.47 O ATOM 135 CB PHE 27 -14.075 -7.321 8.637 1.00 7.47 C ATOM 136 N ARG 28 -10.856 -8.381 8.175 1.00 6.54 N ATOM 137 CA ARG 28 -9.463 -8.016 8.402 1.00 6.54 C ATOM 138 C ARG 28 -8.889 -7.261 7.209 1.00 6.54 C ATOM 139 O ARG 28 -9.074 -7.665 6.060 1.00 6.54 O ATOM 140 CB ARG 28 -8.631 -9.254 8.697 1.00 6.54 C ATOM 141 N ALA 29 -8.195 -6.163 7.488 1.00 5.99 N ATOM 142 CA ALA 29 -7.599 -5.346 6.438 1.00 5.99 C ATOM 143 C ALA 29 -6.197 -4.893 6.821 1.00 5.99 C ATOM 144 O ALA 29 -6.028 -3.957 7.602 1.00 5.99 O ATOM 145 CB ALA 29 -8.483 -4.146 6.135 1.00 5.99 C ATOM 146 N LYS 30 -5.191 -5.562 6.268 1.00 5.34 N ATOM 147 CA LYS 30 -3.803 -5.161 6.463 1.00 5.34 C ATOM 148 C LYS 30 -3.510 -3.836 5.771 1.00 5.34 C ATOM 149 O LYS 30 -4.015 -3.570 4.681 1.00 5.34 O ATOM 150 CB LYS 30 -2.862 -6.245 5.960 1.00 5.34 C ATOM 151 N THR 31 -2.690 -3.009 6.411 1.00 5.00 N ATOM 152 CA THR 31 -2.315 -1.717 5.850 1.00 5.00 C ATOM 153 C THR 31 -0.825 -1.666 5.535 1.00 5.00 C ATOM 154 O THR 31 0.006 -1.545 6.434 1.00 5.00 O ATOM 155 CB THR 31 -2.695 -0.595 6.803 1.00 5.00 C ATOM 156 N THR 32 -0.494 -1.758 4.251 1.00 4.62 N ATOM 157 CA THR 32 0.896 -1.721 3.814 1.00 4.62 C ATOM 158 C THR 32 1.158 -0.522 2.912 1.00 4.62 C ATOM 159 O THR 32 0.787 -0.523 1.738 1.00 4.62 O ATOM 160 CB THR 32 1.263 -3.013 3.101 1.00 4.62 C ATOM 161 N PRO 33 1.801 0.500 3.466 1.00 4.83 N ATOM 162 CA PRO 33 2.020 1.749 2.746 1.00 4.83 C ATOM 163 C PRO 33 3.176 1.621 1.762 1.00 4.83 C ATOM 164 O PRO 33 4.225 1.066 2.090 1.00 4.83 O ATOM 165 CB PRO 33 2.276 2.887 3.721 1.00 4.83 C ATOM 166 N GLU 34 2.978 2.137 0.553 1.00 4.68 N ATOM 167 CA GLU 34 4.048 2.210 -0.434 1.00 4.68 C ATOM 168 C GLU 34 3.738 3.244 -1.508 1.00 4.68 C ATOM 169 O GLU 34 2.706 3.913 -1.459 1.00 4.68 O ATOM 170 CB GLU 34 4.285 0.844 -1.061 1.00 4.68 C ATOM 171 N CYS 35 4.638 3.371 -2.478 1.00 4.57 N ATOM 172 CA CYS 35 4.433 4.280 -3.598 1.00 4.57 C ATOM 173 C CYS 35 4.487 3.537 -4.927 1.00 4.57 C ATOM 174 O CYS 35 5.398 2.745 -5.169 1.00 4.57 O ATOM 175 CB CYS 35 5.465 5.397 -3.570 1.00 4.57 C ATOM 176 N GLY 36 3.507 3.798 -5.786 1.00 5.01 N ATOM 177 CA GLY 36 3.442 3.155 -7.093 1.00 5.01 C ATOM 178 C GLY 36 4.504 3.711 -8.033 1.00 5.01 C ATOM 179 O GLY 36 5.236 4.636 -7.681 1.00 5.01 O ATOM 181 N PRO 37 4.583 3.139 -9.230 1.00 5.35 N ATOM 182 CA PRO 37 5.509 3.622 -10.248 1.00 5.35 C ATOM 183 C PRO 37 5.251 5.086 -10.578 1.00 5.35 C ATOM 184 O PRO 37 6.158 5.808 -10.992 1.00 5.35 O ATOM 185 CB PRO 37 5.408 2.768 -11.504 1.00 5.35 C ATOM 186 N THR 38 4.010 5.520 -10.392 1.00 5.01 N ATOM 187 CA THR 38 3.636 6.906 -10.648 1.00 5.01 C ATOM 188 C THR 38 4.033 7.808 -9.485 1.00 5.01 C ATOM 189 O THR 38 3.914 9.030 -9.567 1.00 5.01 O ATOM 190 CB THR 38 2.143 7.011 -10.916 1.00 5.01 C ATOM 191 N GLY 39 4.505 7.197 -8.405 1.00 4.40 N ATOM 192 CA GLY 39 4.935 7.943 -7.228 1.00 4.40 C ATOM 193 C GLY 39 3.758 8.246 -6.309 1.00 4.40 C ATOM 194 O GLY 39 3.881 9.025 -5.364 1.00 4.40 O ATOM 196 N TYR 40 2.618 7.626 -6.592 1.00 3.89 N ATOM 197 CA TYR 40 1.412 7.843 -5.801 1.00 3.89 C ATOM 198 C TYR 40 1.421 6.994 -4.537 1.00 3.89 C ATOM 199 O TYR 40 1.927 5.872 -4.535 1.00 3.89 O ATOM 200 CB TYR 40 0.174 7.545 -6.633 1.00 3.89 C ATOM 201 N VAL 41 0.859 7.537 -3.462 1.00 4.00 N ATOM 202 CA VAL 41 0.710 6.792 -2.217 1.00 4.00 C ATOM 203 C VAL 41 -0.408 5.762 -2.322 1.00 4.00 C ATOM 204 O VAL 41 -1.521 6.081 -2.739 1.00 4.00 O ATOM 205 CB VAL 41 0.450 7.743 -1.060 1.00 4.00 C ATOM 206 N GLU 42 -0.104 4.526 -1.943 1.00 3.59 N ATOM 207 CA GLU 42 -1.055 3.429 -2.071 1.00 3.59 C ATOM 208 C GLU 42 -0.911 2.437 -0.925 1.00 3.59 C ATOM 209 O GLU 42 0.118 2.400 -0.250 1.00 3.59 O ATOM 210 CB GLU 42 -0.878 2.726 -3.409 1.00 3.59 C ATOM 211 N LYS 43 -1.948 1.634 -0.709 1.00 3.53 N ATOM 212 CA LYS 43 -1.939 0.641 0.359 1.00 3.53 C ATOM 213 C LYS 43 -2.445 -0.706 -0.137 1.00 3.53 C ATOM 214 O LYS 43 -3.424 -0.776 -0.881 1.00 3.53 O ATOM 215 CB LYS 43 -2.772 1.123 1.537 1.00 3.53 C ATOM 216 N ILE 44 -1.774 -1.775 0.278 1.00 3.30 N ATOM 217 CA ILE 44 -2.220 -3.128 -0.033 1.00 3.30 C ATOM 218 C ILE 44 -2.779 -3.821 1.203 1.00 3.30 C ATOM 219 O ILE 44 -2.270 -3.644 2.309 1.00 3.30 O ATOM 220 CB ILE 44 -1.079 -3.938 -0.627 1.00 3.30 C ATOM 221 N THR 45 -3.830 -4.611 1.008 1.00 3.31 N ATOM 222 CA THR 45 -4.482 -5.305 2.111 1.00 3.31 C ATOM 223 C THR 45 -4.350 -6.815 1.966 1.00 3.31 C ATOM 224 O THR 45 -4.352 -7.345 0.855 1.00 3.31 O ATOM 225 CB THR 45 -5.946 -4.905 2.198 1.00 3.31 C ATOM 226 N CYS 46 -4.235 -7.505 3.096 1.00 3.58 N ATOM 227 CA CYS 46 -4.198 -8.963 3.103 1.00 3.58 C ATOM 228 C CYS 46 -5.165 -9.534 4.132 1.00 3.58 C ATOM 229 O CYS 46 -5.064 -9.238 5.323 1.00 3.58 O ATOM 230 CB CYS 46 -2.784 -9.456 3.371 1.00 3.58 C ATOM 231 N SER 47 -6.100 -10.353 3.667 1.00 3.91 N ATOM 232 CA SER 47 -7.097 -10.957 4.544 1.00 3.91 C ATOM 233 C SER 47 -6.537 -12.187 5.248 1.00 3.91 C ATOM 234 O SER 47 -6.396 -13.250 4.644 1.00 3.91 O ATOM 235 CB SER 47 -8.347 -11.317 3.757 1.00 3.91 C ATOM 236 N SER 48 -6.219 -12.035 6.530 1.00 4.21 N ATOM 237 CA SER 48 -5.608 -13.111 7.300 1.00 4.21 C ATOM 238 C SER 48 -6.548 -14.303 7.424 1.00 4.21 C ATOM 239 O SER 48 -6.106 -15.445 7.549 1.00 4.21 O ATOM 240 CB SER 48 -5.198 -12.611 8.676 1.00 4.21 C ATOM 241 N SER 49 -7.849 -14.030 7.390 1.00 4.37 N ATOM 242 CA SER 49 -8.855 -15.078 7.518 1.00 4.37 C ATOM 243 C SER 49 -9.023 -15.843 6.212 1.00 4.37 C ATOM 244 O SER 49 -8.878 -17.065 6.175 1.00 4.37 O ATOM 245 CB SER 49 -10.184 -14.485 7.962 1.00 4.37 C ATOM 246 N LYS 50 -9.329 -15.118 5.142 1.00 4.40 N ATOM 247 CA LYS 50 -9.570 -15.732 3.843 1.00 4.40 C ATOM 248 C LYS 50 -8.282 -15.833 3.035 1.00 4.40 C ATOM 249 O LYS 50 -8.287 -16.303 1.896 1.00 4.40 O ATOM 250 CB LYS 50 -10.621 -14.950 3.072 1.00 4.40 C ATOM 251 N ARG 51 -7.180 -15.390 3.629 1.00 4.40 N ATOM 252 CA ARG 51 -5.880 -15.443 2.971 1.00 4.40 C ATOM 253 C ARG 51 -5.912 -14.723 1.629 1.00 4.40 C ATOM 254 O ARG 51 -5.223 -15.115 0.686 1.00 4.40 O ATOM 255 CB ARG 51 -5.436 -16.886 2.790 1.00 4.40 C ATOM 256 N ASN 52 -6.716 -13.669 1.548 1.00 4.43 N ATOM 257 CA ASN 52 -6.811 -12.869 0.332 1.00 4.43 C ATOM 258 C ASN 52 -6.299 -11.453 0.563 1.00 4.43 C ATOM 259 O ASN 52 -6.217 -10.990 1.701 1.00 4.43 O ATOM 260 CB ASN 52 -8.245 -12.841 -0.174 1.00 4.43 C ATOM 261 N GLU 53 -5.957 -10.768 -0.523 1.00 4.22 N ATOM 262 CA GLU 53 -5.427 -9.413 -0.438 1.00 4.22 C ATOM 263 C GLU 53 -5.958 -8.543 -1.571 1.00 4.22 C ATOM 264 O GLU 53 -6.393 -9.050 -2.604 1.00 4.22 O ATOM 265 CB GLU 53 -3.906 -9.435 -0.453 1.00 4.22 C ATOM 266 N PHE 54 -5.918 -7.230 -1.369 1.00 4.11 N ATOM 267 CA PHE 54 -6.338 -6.284 -2.398 1.00 4.11 C ATOM 268 C PHE 54 -5.552 -4.982 -2.302 1.00 4.11 C ATOM 269 O PHE 54 -5.024 -4.642 -1.244 1.00 4.11 O ATOM 270 CB PHE 54 -7.830 -6.014 -2.291 1.00 4.11 C ATOM 271 N LYS 55 -5.480 -4.258 -3.413 1.00 4.14 N ATOM 272 CA LYS 55 -4.709 -3.023 -3.473 1.00 4.14 C ATOM 273 C LYS 55 -5.591 -1.841 -3.857 1.00 4.14 C ATOM 274 O LYS 55 -6.580 -1.999 -4.572 1.00 4.14 O ATOM 275 CB LYS 55 -3.554 -3.165 -4.454 1.00 4.14 C ATOM 276 N SER 56 -5.225 -0.657 -3.378 1.00 4.17 N ATOM 277 CA SER 56 -5.970 0.557 -3.686 1.00 4.17 C ATOM 278 C SER 56 -5.043 1.762 -3.789 1.00 4.17 C ATOM 279 O SER 56 -3.888 1.706 -3.367 1.00 4.17 O ATOM 280 CB SER 56 -7.044 0.802 -2.637 1.00 4.17 C ATOM 281 N CYS 57 -5.556 2.850 -4.355 1.00 4.27 N ATOM 282 CA CYS 57 -4.814 4.103 -4.416 1.00 4.27 C ATOM 283 C CYS 57 -5.680 5.278 -3.980 1.00 4.27 C ATOM 284 O CYS 57 -6.907 5.224 -4.069 1.00 4.27 O ATOM 285 CB CYS 57 -4.274 4.332 -5.819 1.00 4.27 C ATOM 286 N ARG 58 -5.034 6.339 -3.508 1.00 5.13 N ATOM 287 CA ARG 58 -5.744 7.530 -3.056 1.00 5.13 C ATOM 288 C ARG 58 -6.270 8.338 -4.236 1.00 5.13 C ATOM 289 O ARG 58 -6.910 9.374 -4.055 1.00 5.13 O ATOM 290 CB ARG 58 -4.841 8.388 -2.184 1.00 5.13 C ATOM 291 N SER 59 -5.996 7.858 -5.445 1.00 5.56 N ATOM 292 CA SER 59 -6.442 8.534 -6.656 1.00 5.56 C ATOM 293 C SER 59 -6.577 7.556 -7.816 1.00 5.56 C ATOM 294 O SER 59 -5.688 6.740 -8.060 1.00 5.56 O ATOM 295 CB SER 59 -5.483 9.658 -7.018 1.00 5.56 C ATOM 296 N ALA 60 -7.695 7.641 -8.527 1.00 5.91 N ATOM 297 CA ALA 60 -7.950 6.763 -9.664 1.00 5.91 C ATOM 298 C ALA 60 -7.627 7.458 -10.980 1.00 5.91 C ATOM 299 O ALA 60 -7.839 8.662 -11.126 1.00 5.91 O ATOM 300 CB ALA 60 -9.394 6.287 -9.652 1.00 5.91 C ATOM 301 N LEU 61 -7.115 6.692 -11.937 1.00 7.59 N ATOM 302 CA LEU 61 -6.762 7.233 -13.244 1.00 7.59 C ATOM 303 C LEU 61 -8.007 7.562 -14.058 1.00 7.59 C ATOM 304 O LEU 61 -8.084 8.613 -14.696 1.00 7.59 O ATOM 305 CB LEU 61 -5.876 6.256 -14.000 1.00 7.59 C ATOM 306 N MET 62 -8.981 6.659 -14.033 1.00 8.76 N ATOM 307 CA MET 62 -10.224 6.851 -14.769 1.00 8.76 C ATOM 308 C MET 62 -11.263 7.570 -13.917 1.00 8.76 C ATOM 309 O MET 62 -12.073 8.343 -14.429 1.00 8.76 O ATOM 310 CB MET 62 -10.767 5.515 -15.252 1.00 8.76 C ATOM 311 N GLU 63 -11.233 7.312 -12.614 1.00 8.01 N ATOM 312 CA GLU 63 -12.171 7.935 -11.688 1.00 8.01 C ATOM 313 C GLU 63 -11.817 9.395 -11.443 1.00 8.01 C ATOM 314 O GLU 63 -12.675 10.200 -11.079 1.00 8.01 O ATOM 315 CB GLU 63 -12.207 7.169 -10.374 1.00 8.01 C TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 288 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 80.27 44.7 114 100.0 114 ARMSMC SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSMC SURFACE . . . . . . . . 0.00 0.0 0 0.0 0 ARMSMC BURIED . . . . . . . . 80.27 44.7 114 100.0 114 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 53 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 49 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 53 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 28 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 32 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 17 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 17 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 7 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 0 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 7 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 12.32 (Number of atoms: 58) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 12.32 58 100.0 58 CRMSCA CRN = ALL/NP . . . . . 0.2123 CRMSCA SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSCA SURFACE . . . . . . . . 0.00 0 0.0 0 CRMSCA BURIED . . . . . . . . 12.32 58 100.0 58 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 12.35 288 100.0 288 CRMSMC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSMC SURFACE . . . . . . . . 0.00 0 0.0 0 CRMSMC BURIED . . . . . . . . 12.35 288 100.0 288 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.56 56 7.1 785 CRMSSC RELIABLE SIDE CHAINS . 12.56 56 7.3 769 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 0 CRMSSC BURIED . . . . . . . . 12.56 56 7.1 785 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 12.35 288 28.3 1017 CRMSALL SECONDARY STRUCTURE . . 0.00 0 0.0 0 CRMSALL SURFACE . . . . . . . . 0.00 0 0.0 0 CRMSALL BURIED . . . . . . . . 12.35 288 28.3 1017 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.342 0.347 0.181 58 100.0 58 ERRCA SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRCA SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 0 ERRCA BURIED . . . . . . . . 6.342 0.347 0.181 58 100.0 58 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.420 0.354 0.187 288 100.0 288 ERRMC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRMC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 0 ERRMC BURIED . . . . . . . . 6.420 0.354 0.187 288 100.0 288 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.589 0.359 0.192 56 7.1 785 ERRSC RELIABLE SIDE CHAINS . 6.589 0.359 0.192 56 7.3 769 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 0 ERRSC BURIED . . . . . . . . 6.589 0.359 0.192 56 7.1 785 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.420 0.354 0.187 288 28.3 1017 ERRALL SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 0 ERRALL SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 0 ERRALL BURIED . . . . . . . . 6.420 0.354 0.187 288 28.3 1017 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 1 1 4 23 58 58 DISTCA CA (P) 0.00 1.72 1.72 6.90 39.66 58 DISTCA CA (RMS) 0.00 1.71 1.71 3.66 7.35 DISTCA ALL (N) 0 5 8 22 114 288 1017 DISTALL ALL (P) 0.00 0.49 0.79 2.16 11.21 1017 DISTALL ALL (RMS) 0.00 1.75 1.97 3.65 7.37 DISTALL END of the results output