####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 53 ( 428), selected 53 , name T0529TS436_1-D2 # Molecule2: number of CA atoms 193 ( 1523), selected 53 , name T0529-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0529TS436_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 372 - 390 4.81 15.09 LCS_AVERAGE: 8.62 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 383 - 389 1.81 20.40 LONGEST_CONTINUOUS_SEGMENT: 7 384 - 390 1.89 26.89 LONGEST_CONTINUOUS_SEGMENT: 7 402 - 408 1.92 21.51 LCS_AVERAGE: 2.78 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 382 - 385 0.58 18.87 LONGEST_CONTINUOUS_SEGMENT: 4 385 - 388 0.95 27.88 LONGEST_CONTINUOUS_SEGMENT: 4 386 - 389 0.76 25.73 LONGEST_CONTINUOUS_SEGMENT: 4 393 - 396 0.40 33.71 LONGEST_CONTINUOUS_SEGMENT: 4 401 - 404 0.94 15.80 LONGEST_CONTINUOUS_SEGMENT: 4 404 - 407 0.43 20.54 LONGEST_CONTINUOUS_SEGMENT: 4 405 - 408 0.74 21.56 LONGEST_CONTINUOUS_SEGMENT: 4 411 - 414 0.93 25.40 LONGEST_CONTINUOUS_SEGMENT: 4 412 - 415 0.45 25.90 LCS_AVERAGE: 1.74 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 53 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 364 G 364 3 4 14 0 3 3 4 4 5 7 8 10 10 11 12 16 16 16 17 20 25 27 29 LCS_GDT L 365 L 365 3 4 14 0 3 3 4 5 6 7 8 10 11 13 14 16 18 20 23 27 29 32 38 LCS_GDT T 366 T 366 3 4 14 3 3 3 4 5 6 7 8 10 11 11 13 16 16 19 19 25 25 27 29 LCS_GDT Y 367 Y 367 3 4 14 3 3 3 5 5 6 7 9 9 9 10 11 15 16 19 23 25 29 30 33 LCS_GDT S 368 S 368 3 5 14 3 3 3 5 5 6 7 9 10 11 13 14 16 18 23 25 29 33 36 38 LCS_GDT Q 369 Q 369 3 5 14 3 5 5 6 6 9 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT L 370 L 370 3 5 14 3 5 5 6 7 9 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT M 371 M 371 3 5 18 3 5 5 6 7 9 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT T 372 T 372 3 5 19 3 3 3 5 5 6 7 9 12 15 16 19 22 24 25 29 31 33 36 38 LCS_GDT L 373 L 373 3 4 19 3 3 3 3 5 6 7 10 12 15 16 18 20 23 25 29 31 33 36 38 LCS_GDT K 374 K 374 3 4 19 3 3 3 4 4 6 7 9 10 10 13 18 19 20 23 29 31 33 36 38 LCS_GDT D 375 D 375 3 4 19 3 3 3 4 4 6 7 10 11 15 16 19 22 24 25 29 31 33 36 38 LCS_GDT A 376 A 376 3 4 19 0 3 3 3 4 6 7 8 10 12 13 18 20 21 22 29 31 33 36 38 LCS_GDT M 377 M 377 3 4 19 0 3 3 3 4 5 7 7 9 14 16 19 22 24 25 29 31 33 36 38 LCS_GDT L 378 L 378 0 4 19 3 5 5 6 7 9 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT Q 379 Q 379 3 5 19 3 5 5 6 7 9 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT L 380 L 380 3 5 19 3 3 5 6 7 9 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT D 381 D 381 3 5 19 3 3 4 6 6 9 9 10 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT P 382 P 382 4 6 19 3 4 4 4 6 7 8 10 13 14 17 19 22 24 25 29 31 33 36 38 LCS_GDT N 383 N 383 4 7 19 3 4 4 5 6 7 9 10 13 15 16 17 20 24 25 29 31 33 36 38 LCS_GDT A 384 A 384 4 7 19 3 4 4 5 7 7 9 10 12 15 16 17 19 21 25 29 31 33 36 38 LCS_GDT K 385 K 385 4 7 19 3 4 4 5 7 7 9 10 12 15 16 17 19 21 24 29 31 33 36 38 LCS_GDT T 386 T 386 4 7 19 3 4 4 5 7 7 9 10 12 15 16 17 19 21 24 29 31 33 36 38 LCS_GDT W 387 W 387 4 7 19 3 4 4 5 7 7 9 10 12 15 16 17 19 20 23 27 30 33 36 38 LCS_GDT M 388 M 388 4 7 19 3 4 4 5 7 7 9 10 12 15 16 17 19 21 24 29 31 33 36 38 LCS_GDT D 389 D 389 4 7 19 3 4 4 4 7 7 8 10 12 15 16 17 19 20 23 25 30 33 35 37 LCS_GDT I 390 I 390 3 7 19 0 3 4 4 7 7 8 10 12 15 16 17 19 21 24 28 30 33 36 38 LCS_GDT E 391 E 391 3 4 17 3 3 4 4 4 5 6 9 10 13 16 17 19 21 25 29 31 33 36 38 LCS_GDT G 392 G 392 3 4 18 3 3 4 4 6 7 8 10 11 12 15 18 20 23 25 29 31 33 36 38 LCS_GDT R 393 R 393 4 5 18 4 4 4 5 6 7 8 10 11 14 17 19 22 24 25 29 31 33 36 38 LCS_GDT P 394 P 394 4 5 18 4 4 5 6 7 9 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT E 395 E 395 4 5 18 4 4 4 4 4 7 7 12 14 15 17 17 22 24 25 27 28 30 33 38 LCS_GDT D 396 D 396 4 5 18 4 4 4 5 5 7 9 12 14 15 17 17 22 24 25 27 28 33 36 38 LCS_GDT P 397 P 397 3 5 18 1 3 3 5 5 7 9 12 14 15 17 19 22 24 25 28 31 33 36 38 LCS_GDT V 398 V 398 3 5 18 1 3 3 5 5 6 7 11 11 14 15 17 18 21 22 25 28 33 36 38 LCS_GDT E 399 E 399 3 5 18 3 3 3 5 5 8 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT I 400 I 400 3 5 18 3 3 3 5 6 8 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT A 401 A 401 4 6 18 3 3 4 5 7 8 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT L 402 L 402 4 7 18 1 3 5 6 7 9 9 12 14 15 17 19 22 24 25 29 31 33 36 38 LCS_GDT Y 403 Y 403 4 7 18 2 3 4 6 7 8 8 10 13 14 14 19 22 24 25 29 31 33 36 38 LCS_GDT Q 404 Q 404 4 7 18 0 4 4 6 7 8 8 10 11 12 14 15 16 18 24 27 30 32 34 37 LCS_GDT P 405 P 405 4 7 18 3 4 4 6 7 8 8 10 11 12 14 15 17 21 25 27 30 32 34 37 LCS_GDT S 406 S 406 4 7 18 3 4 4 6 7 8 8 9 9 12 12 15 16 18 18 25 30 31 32 37 LCS_GDT S 407 S 407 4 7 18 3 4 4 6 7 8 8 9 9 10 11 14 16 19 23 27 30 32 34 37 LCS_GDT G 408 G 408 4 7 18 3 4 4 6 7 8 8 9 13 14 17 18 21 24 25 29 31 33 36 38 LCS_GDT C 409 C 409 3 5 18 3 3 4 4 5 7 8 10 11 14 17 18 22 24 25 28 31 33 36 38 LCS_GDT Y 410 Y 410 3 5 12 3 3 4 4 4 5 6 7 8 11 13 15 16 18 20 20 27 29 32 34 LCS_GDT I 411 I 411 4 5 11 3 3 5 5 5 5 5 5 8 8 9 10 11 13 17 18 19 22 23 23 LCS_GDT H 412 H 412 4 5 10 4 4 5 5 5 5 5 5 8 8 9 10 11 13 15 15 18 22 23 28 LCS_GDT F 413 F 413 4 5 10 4 4 5 5 5 5 5 5 8 8 9 10 11 13 15 15 18 22 23 28 LCS_GDT F 414 F 414 4 5 7 4 4 5 5 5 5 5 5 9 11 13 14 16 16 16 18 20 23 25 28 LCS_GDT R 415 R 415 4 5 7 4 4 5 5 5 5 7 7 9 11 13 14 16 16 16 16 20 22 25 28 LCS_GDT E 416 E 416 0 4 7 0 0 2 3 4 4 4 5 5 6 6 14 16 16 16 16 17 17 17 18 LCS_AVERAGE LCS_A: 4.38 ( 1.74 2.78 8.62 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 6 7 9 9 12 14 15 17 19 22 24 25 29 31 33 36 38 GDT PERCENT_AT 2.07 2.59 2.59 3.11 3.63 4.66 4.66 6.22 7.25 7.77 8.81 9.84 11.40 12.44 12.95 15.03 16.06 17.10 18.65 19.69 GDT RMS_LOCAL 0.40 0.70 0.70 1.16 1.73 2.15 2.15 2.72 3.15 3.41 4.01 4.67 4.89 5.15 5.29 6.29 6.40 6.64 7.03 7.26 GDT RMS_ALL_AT 33.71 13.66 13.66 12.05 10.76 10.77 10.77 11.10 10.89 10.74 10.60 10.64 10.65 10.57 10.61 11.01 10.85 11.03 10.76 10.63 # Checking swapping # possible swapping detected: Y 367 Y 367 # possible swapping detected: D 389 D 389 # possible swapping detected: E 391 E 391 # possible swapping detected: E 395 E 395 # possible swapping detected: D 396 D 396 # possible swapping detected: E 399 E 399 # possible swapping detected: F 414 F 414 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 364 G 364 13.636 0 0.323 0.323 15.831 0.000 0.000 LGA L 365 L 365 9.377 0 0.160 1.105 11.609 0.357 2.500 LGA T 366 T 366 11.809 0 0.439 1.414 14.953 0.000 0.000 LGA Y 367 Y 367 11.238 0 0.383 1.201 13.072 1.905 0.635 LGA S 368 S 368 7.444 0 0.426 0.488 11.777 22.381 15.397 LGA Q 369 Q 369 2.854 0 0.556 0.899 5.441 48.690 41.217 LGA L 370 L 370 1.115 0 0.548 1.171 4.498 64.048 67.857 LGA M 371 M 371 1.368 0 0.634 1.352 9.431 67.500 46.964 LGA T 372 T 372 7.217 0 0.171 0.297 12.186 13.333 8.231 LGA L 373 L 373 8.216 0 0.564 1.373 10.877 3.690 3.155 LGA K 374 K 374 8.602 0 0.226 0.889 10.404 4.643 2.434 LGA D 375 D 375 5.318 0 0.395 1.261 6.646 18.452 30.952 LGA A 376 A 376 7.472 0 0.633 0.594 10.213 13.452 10.762 LGA M 377 M 377 5.488 0 0.222 0.805 9.215 28.214 19.524 LGA L 378 L 378 2.313 0 0.584 1.201 5.139 59.524 47.857 LGA Q 379 Q 379 3.792 0 0.433 1.524 6.419 48.452 35.661 LGA L 380 L 380 2.924 0 0.109 1.396 6.152 40.714 38.631 LGA D 381 D 381 7.591 0 0.420 1.304 10.688 14.286 7.619 LGA P 382 P 382 10.289 0 0.649 0.616 14.731 0.833 0.476 LGA N 383 N 383 10.673 0 0.731 1.288 15.853 0.000 0.000 LGA A 384 A 384 12.592 0 0.524 0.581 12.781 0.000 0.000 LGA K 385 K 385 13.329 0 0.397 1.358 17.198 0.000 0.000 LGA T 386 T 386 13.131 0 0.626 1.154 13.872 0.000 0.000 LGA W 387 W 387 14.324 0 0.381 1.031 23.809 0.000 0.000 LGA M 388 M 388 14.147 0 0.449 0.671 14.832 0.000 0.000 LGA D 389 D 389 16.409 0 0.554 1.209 18.002 0.000 0.000 LGA I 390 I 390 15.711 0 0.621 0.986 15.907 0.000 0.000 LGA E 391 E 391 13.793 0 0.296 1.130 17.092 0.000 0.000 LGA G 392 G 392 10.536 0 0.528 0.528 11.725 1.548 1.548 LGA R 393 R 393 9.311 0 0.487 1.305 17.396 10.357 3.766 LGA P 394 P 394 5.503 0 0.359 0.385 9.021 37.262 23.333 LGA E 395 E 395 3.515 0 0.117 1.287 8.047 39.762 24.709 LGA D 396 D 396 3.378 0 0.093 0.350 4.562 46.667 46.071 LGA P 397 P 397 3.538 0 0.515 0.717 5.247 39.048 37.415 LGA V 398 V 398 5.075 0 0.287 1.308 9.417 29.524 19.116 LGA E 399 E 399 2.975 0 0.053 0.739 7.727 59.048 36.614 LGA I 400 I 400 1.804 0 0.421 1.499 5.917 66.905 56.964 LGA A 401 A 401 1.004 0 0.629 0.570 3.288 71.429 68.571 LGA L 402 L 402 5.701 0 0.563 1.377 8.248 20.476 15.119 LGA Y 403 Y 403 11.440 0 0.112 0.243 20.974 0.119 0.040 LGA Q 404 Q 404 15.867 0 0.379 1.679 19.876 0.000 0.000 LGA P 405 P 405 15.703 0 0.636 0.577 18.444 0.000 0.000 LGA S 406 S 406 21.173 0 0.101 0.730 25.733 0.000 0.000 LGA S 407 S 407 19.311 0 0.475 0.794 20.357 0.000 0.000 LGA G 408 G 408 12.553 0 0.202 0.202 14.813 0.119 0.119 LGA C 409 C 409 10.340 0 0.123 0.732 12.218 0.000 0.000 LGA Y 410 Y 410 11.570 0 0.541 1.509 13.806 0.000 8.333 LGA I 411 I 411 14.911 0 0.528 1.233 21.210 0.000 0.000 LGA H 412 H 412 13.121 0 0.575 0.900 13.330 0.000 0.000 LGA F 413 F 413 14.591 0 0.276 1.283 18.006 0.000 0.000 LGA F 414 F 414 15.023 0 0.216 0.817 18.019 0.000 0.000 LGA R 415 R 415 16.154 0 0.529 1.610 19.010 0.000 0.000 LGA E 416 E 416 20.419 0 0.087 1.243 24.513 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 53 212 212 100.00 428 428 100.00 193 SUMMARY(RMSD_GDC): 10.311 10.349 11.546 4.522 3.739 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 53 193 4.0 12 2.72 6.736 5.480 0.425 LGA_LOCAL RMSD: 2.722 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.105 Number of assigned atoms: 53 Std_ASGN_ATOMS RMSD: 10.311 Standard rmsd on all 53 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.085501 * X + -0.967480 * Y + -0.238061 * Z + 62.099689 Y_new = 0.619881 * X + -0.238715 * Y + 0.747504 * Z + -58.278149 Z_new = -0.780024 * X + -0.083657 * Y + 0.620133 * Z + 13.178065 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.707863 0.894704 -0.134092 [DEG: 97.8534 51.2628 -7.6829 ] ZXZ: -2.833275 0.901885 -1.677637 [DEG: -162.3347 51.6742 -96.1215 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0529TS436_1-D2 REMARK 2: T0529-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0529TS436_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 53 193 4.0 12 2.72 5.480 10.31 REMARK ---------------------------------------------------------- MOLECULE T0529TS436_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFRMAT TS REMARK TARGET T0529 REMARK MODEL 1 REFINED REMARK PARENT 1MRZ_A ATOM 3298 N GLY 364 55.373 -25.102 -4.140 1.00 1.65 N ATOM 3299 CA GLY 364 56.574 -25.312 -5.007 1.00 1.66 C ATOM 3300 C GLY 364 57.235 -25.515 -6.528 1.00 1.46 C ATOM 3301 O GLY 364 56.493 -25.584 -7.493 1.00 1.34 O ATOM 3305 N LEU 365 58.610 -25.588 -6.738 1.00 6.59 N ATOM 3306 CA LEU 365 59.332 -25.001 -7.888 1.00 6.67 C ATOM 3307 C LEU 365 60.232 -25.920 -8.828 1.00 6.27 C ATOM 3308 O LEU 365 60.275 -27.112 -8.512 1.00 6.37 O ATOM 3309 CB LEU 365 60.281 -23.839 -7.310 1.00 7.20 C ATOM 3310 CG LEU 365 61.834 -23.361 -7.312 1.00 5.75 C ATOM 3311 CD1 LEU 365 62.434 -22.738 -8.637 1.00 3.24 C ATOM 3312 CD2 LEU 365 62.927 -24.258 -6.603 1.00 5.46 C ATOM 3324 N THR 366 60.888 -25.386 -9.878 1.00 6.00 N ATOM 3325 CA THR 366 61.962 -25.951 -10.690 1.00 5.93 C ATOM 3326 C THR 366 61.763 -27.375 -11.271 1.00 5.36 C ATOM 3327 O THR 366 62.525 -28.302 -10.931 1.00 6.03 O ATOM 3328 CB THR 366 63.469 -25.615 -10.259 1.00 6.54 C ATOM 3332 OG1 THR 366 63.937 -24.372 -10.981 1.00 0.99 O ATOM 3334 CG2 THR 366 64.598 -26.665 -10.524 1.00 0.99 C ATOM 3338 CA TYR 367 60.050 -28.785 -11.964 1.00 0.99 C ATOM 3339 N TYR 367 60.762 -27.570 -12.081 1.00 0.99 N ATOM 3342 C TYR 367 58.884 -28.529 -12.894 1.00 0.99 C ATOM 3343 O TYR 367 59.071 -28.445 -14.129 1.00 0.99 O ATOM 3344 CB TYR 367 59.607 -28.872 -10.464 1.00 0.99 C ATOM 3347 CG TYR 367 58.676 -29.927 -9.978 1.00 0.99 C ATOM 3348 CD1 TYR 367 58.149 -30.935 -10.789 1.00 0.99 C ATOM 3349 CD2 TYR 367 58.439 -29.921 -8.598 1.00 0.99 C ATOM 3352 CE1 TYR 367 57.532 -32.017 -10.176 1.00 0.99 C ATOM 3353 CE2 TYR 367 57.941 -31.061 -7.997 1.00 0.99 C ATOM 3356 CZ TYR 367 57.566 -32.144 -8.787 1.00 0.99 C ATOM 3357 OH TYR 367 57.374 -33.308 -8.247 1.00 0.99 H ATOM 3359 CA SER 368 57.144 -27.077 -12.708 1.00 0.99 C ATOM 3360 N SER 368 57.785 -28.207 -12.300 1.00 0.99 N ATOM 3363 C SER 368 56.297 -27.491 -13.861 1.00 0.99 C ATOM 3364 O SER 368 55.472 -28.414 -13.651 1.00 0.99 O ATOM 3365 CB SER 368 56.386 -26.435 -11.560 1.00 0.99 C ATOM 3368 OG SER 368 57.312 -26.045 -10.443 1.00 0.99 O ATOM 3370 N GLN 369 56.481 -26.879 -15.011 1.00 3.31 N ATOM 3371 CA GLN 369 55.648 -25.782 -15.233 1.00 3.85 C ATOM 3372 C GLN 369 54.176 -25.937 -14.866 1.00 3.18 C ATOM 3373 O GLN 369 53.365 -26.237 -15.777 1.00 3.36 O ATOM 3376 CB GLN 369 56.342 -24.458 -14.819 1.00 0.99 C ATOM 3379 CG GLN 369 57.565 -24.137 -15.766 1.00 0.99 C ATOM 3382 CD GLN 369 58.646 -23.259 -15.110 1.00 0.99 C ATOM 3383 OE1 GLN 369 58.918 -22.179 -15.577 1.00 0.99 O ATOM 3384 NE2 GLN 369 59.329 -23.717 -13.994 1.00 0.99 N ATOM 3387 N LEU 370 53.825 -25.770 -13.613 1.00 2.96 N ATOM 3388 CA LEU 370 52.860 -26.595 -12.969 1.00 2.18 C ATOM 3389 C LEU 370 52.440 -27.891 -13.721 1.00 1.16 C ATOM 3390 O LEU 370 51.463 -27.870 -14.506 1.00 1.10 O ATOM 3391 CB LEU 370 51.580 -25.794 -12.520 1.00 2.32 C ATOM 3392 CG LEU 370 51.707 -25.032 -11.165 1.00 2.65 C ATOM 3397 CD1 LEU 370 50.352 -24.355 -10.785 1.00 0.99 C ATOM 3398 CD2 LEU 370 52.836 -23.973 -11.255 1.00 0.99 C ATOM 3406 N MET 371 53.035 -29.013 -13.418 1.00 0.61 N ATOM 3407 CA MET 371 52.260 -30.111 -13.045 1.00 0.74 C ATOM 3408 C MET 371 51.344 -29.521 -11.963 1.00 1.23 C ATOM 3409 O MET 371 51.829 -29.217 -10.853 1.00 2.06 O ATOM 3410 CB MET 371 53.103 -31.329 -12.506 1.00 0.53 C ATOM 3411 CG MET 371 54.618 -31.425 -12.860 1.00 0.36 C ATOM 3418 SD MET 371 54.950 -31.589 -14.652 1.00 0.99 S ATOM 3419 CE MET 371 56.777 -31.735 -14.692 1.00 0.99 C ATOM 3423 N THR 372 50.138 -29.235 -12.335 1.00 1.05 N ATOM 3424 CA THR 372 49.209 -28.697 -11.425 1.00 1.46 C ATOM 3425 C THR 372 48.996 -29.760 -10.321 1.00 1.55 C ATOM 3426 O THR 372 49.491 -29.506 -9.209 1.00 1.71 O ATOM 3427 CB THR 372 47.940 -28.312 -12.236 1.00 1.70 C ATOM 3431 OG1 THR 372 48.315 -27.542 -13.479 1.00 0.99 O ATOM 3433 CG2 THR 372 46.945 -27.445 -11.414 1.00 0.99 C ATOM 3437 N LEU 373 48.448 -30.925 -10.608 1.00 1.66 N ATOM 3438 CA LEU 373 49.018 -32.103 -10.077 1.00 2.32 C ATOM 3439 C LEU 373 48.036 -33.266 -9.839 1.00 1.04 C ATOM 3440 O LEU 373 46.820 -33.016 -9.908 1.00 1.59 O ATOM 3443 CB LEU 373 50.391 -32.335 -10.755 1.00 0.99 C ATOM 3446 CG LEU 373 51.294 -33.540 -10.348 1.00 0.99 C ATOM 3447 CD1 LEU 373 51.442 -33.661 -8.794 1.00 0.99 C ATOM 3448 CD2 LEU 373 51.094 -34.850 -11.179 1.00 0.99 C ATOM 3456 CA LYS 374 47.741 -35.606 -9.224 1.00 0.99 C ATOM 3457 N LYS 374 48.512 -34.449 -9.495 1.00 0.99 N ATOM 3460 C LYS 374 48.567 -36.678 -8.392 1.00 0.99 C ATOM 3461 O LYS 374 47.968 -37.742 -8.138 1.00 0.99 O ATOM 3462 CB LYS 374 47.289 -36.307 -10.570 1.00 0.99 C ATOM 3465 CG LYS 374 46.041 -35.691 -11.305 1.00 0.99 C ATOM 3468 CD LYS 374 46.323 -35.279 -12.789 1.00 0.99 C ATOM 3471 CE LYS 374 47.245 -34.028 -12.926 1.00 0.99 C ATOM 3474 NZ LYS 374 47.497 -33.726 -14.403 1.00 0.99 N ATOM 3478 CA ASP 375 50.732 -37.581 -7.818 1.00 0.99 C ATOM 3479 N ASP 375 49.823 -36.481 -7.986 1.00 0.99 N ATOM 3482 C ASP 375 51.387 -37.712 -6.395 1.00 0.99 C ATOM 3483 O ASP 375 50.624 -37.870 -5.422 1.00 0.99 O ATOM 3484 CB ASP 375 51.802 -37.537 -8.965 1.00 0.99 C ATOM 3487 CG ASP 375 52.637 -38.827 -9.072 1.00 0.99 C ATOM 3488 OD1 ASP 375 53.892 -38.777 -8.977 1.00 0.99 O ATOM 3489 OD2 ASP 375 52.068 -39.933 -9.272 1.00 0.99 O ATOM 3490 CA ALA 376 53.355 -38.527 -5.265 1.00 0.99 C ATOM 3491 N ALA 376 52.708 -37.743 -6.272 1.00 0.99 N ATOM 3494 C ALA 376 54.902 -38.549 -5.503 1.00 0.99 C ATOM 3495 O ALA 376 55.294 -39.134 -6.533 1.00 0.99 O ATOM 3496 CB ALA 376 52.853 -40.004 -5.416 1.00 0.99 C ATOM 3500 CA MET 377 56.503 -36.893 -5.389 1.00 0.99 C ATOM 3501 N MET 377 55.754 -37.901 -4.747 1.00 0.99 N ATOM 3504 C MET 377 57.941 -36.373 -4.968 1.00 0.99 C ATOM 3505 O MET 377 58.875 -36.575 -5.775 1.00 0.99 O ATOM 3506 CB MET 377 55.484 -35.711 -5.611 1.00 0.99 C ATOM 3509 CG MET 377 55.357 -35.357 -7.123 1.00 0.99 C ATOM 3512 SD MET 377 54.419 -33.825 -7.423 1.00 0.99 S ATOM 3513 CE MET 377 54.502 -33.661 -9.244 1.00 0.99 C ATOM 3517 CA LEU 378 58.945 -34.434 -3.993 1.00 0.99 C ATOM 3518 N LEU 378 58.155 -35.646 -3.878 1.00 0.99 N ATOM 3521 C LEU 378 60.442 -34.435 -3.397 1.00 0.99 C ATOM 3522 O LEU 378 61.041 -35.534 -3.345 1.00 0.99 O ATOM 3523 CB LEU 378 58.052 -33.257 -3.429 1.00 0.99 C ATOM 3526 CG LEU 378 57.722 -32.107 -4.444 1.00 0.99 C ATOM 3527 CD1 LEU 378 56.433 -32.401 -5.261 1.00 0.99 C ATOM 3528 CD2 LEU 378 57.458 -30.750 -3.757 1.00 0.99 C ATOM 3536 CA GLN 379 61.882 -32.843 -1.973 1.00 0.99 C ATOM 3537 N GLN 379 61.009 -33.254 -3.079 1.00 0.99 N ATOM 3540 C GLN 379 63.235 -33.416 -1.261 1.00 0.99 C ATOM 3541 O GLN 379 64.168 -33.807 -2.008 1.00 0.99 O ATOM 3542 CB GLN 379 60.924 -32.412 -0.882 1.00 0.99 C ATOM 3545 CG GLN 379 60.477 -33.666 -0.120 1.00 0.99 C ATOM 3548 CD GLN 379 60.719 -35.072 -0.712 1.00 0.99 C ATOM 3549 OE1 GLN 379 61.827 -35.547 -0.762 1.00 0.99 O ATOM 3550 NE2 GLN 379 59.640 -35.808 -1.172 1.00 0.99 N ATOM 3553 N LEU 380 63.375 -33.374 0.115 1.00 0.53 N ATOM 3554 CA LEU 380 63.975 -32.224 0.766 1.00 0.41 C ATOM 3555 C LEU 380 65.465 -32.394 1.162 1.00 0.40 C ATOM 3556 O LEU 380 65.792 -33.341 1.898 1.00 0.73 O ATOM 3557 CB LEU 380 63.211 -31.821 2.106 1.00 0.32 C ATOM 3558 CG LEU 380 63.904 -30.786 3.080 1.00 0.73 C ATOM 3563 CD1 LEU 380 64.184 -29.375 2.497 1.00 0.99 C ATOM 3564 CD2 LEU 380 63.063 -30.565 4.379 1.00 0.99 C ATOM 3572 N ASP 381 66.289 -31.447 0.796 1.00 0.36 N ATOM 3573 CA ASP 381 67.665 -31.399 1.130 1.00 0.61 C ATOM 3574 C ASP 381 67.880 -30.120 2.038 1.00 1.10 C ATOM 3575 O ASP 381 67.109 -30.010 2.992 1.00 2.74 O ATOM 3576 CB ASP 381 68.442 -31.520 -0.232 1.00 0.51 C ATOM 3577 CG ASP 381 68.150 -32.841 -0.969 1.00 0.92 C ATOM 3582 OD1 ASP 381 66.965 -33.238 -1.111 1.00 0.99 O ATOM 3583 OD2 ASP 381 69.100 -33.537 -1.416 1.00 0.99 O ATOM 3584 N PRO 382 68.833 -29.158 1.898 1.00 0.62 N ATOM 3585 CA PRO 382 69.014 -28.070 2.912 1.00 0.71 C ATOM 3586 C PRO 382 67.901 -27.000 3.122 1.00 0.61 C ATOM 3587 O PRO 382 66.969 -26.908 2.298 1.00 0.64 O ATOM 3588 CB PRO 382 70.285 -27.294 2.482 1.00 1.12 C ATOM 3589 CG PRO 382 71.164 -28.374 1.833 1.00 0.73 C ATOM 3590 CD PRO 382 70.132 -29.351 1.207 1.00 2.89 C ATOM 3598 N ASN 383 68.025 -26.268 4.212 1.00 0.71 N ATOM 3599 CA ASN 383 67.445 -24.982 4.453 1.00 0.64 C ATOM 3600 C ASN 383 68.121 -23.858 3.578 1.00 0.78 C ATOM 3601 O ASN 383 69.259 -24.120 3.146 1.00 1.17 O ATOM 3602 CB ASN 383 67.720 -24.793 5.989 1.00 0.65 C ATOM 3603 CG ASN 383 67.817 -23.352 6.540 1.00 0.98 C ATOM 3608 OD1 ASN 383 68.462 -22.509 5.964 1.00 0.99 O ATOM 3609 ND2 ASN 383 67.249 -23.047 7.760 1.00 0.99 N ATOM 3612 N ALA 384 67.506 -22.723 3.292 1.00 1.02 N ATOM 3613 CA ALA 384 68.058 -21.826 2.313 1.00 0.97 C ATOM 3614 C ALA 384 67.645 -20.299 2.322 1.00 1.69 C ATOM 3615 O ALA 384 68.530 -19.482 2.694 1.00 1.89 O ATOM 3616 CB ALA 384 67.770 -22.415 0.907 1.00 0.61 C ATOM 3622 CA LYS 385 66.344 -19.187 0.618 1.00 0.99 C ATOM 3623 N LYS 385 66.447 -19.921 1.850 1.00 0.99 N ATOM 3626 C LYS 385 65.418 -17.926 0.464 1.00 0.99 C ATOM 3627 O LYS 385 65.766 -16.861 1.008 1.00 0.99 O ATOM 3628 CB LYS 385 67.462 -19.235 -0.487 1.00 0.99 C ATOM 3631 CG LYS 385 68.918 -18.782 -0.144 1.00 0.99 C ATOM 3634 CD LYS 385 69.020 -17.364 0.502 1.00 0.99 C ATOM 3637 CE LYS 385 70.505 -17.053 0.859 1.00 0.99 C ATOM 3640 NZ LYS 385 70.638 -15.642 1.435 1.00 0.99 N ATOM 3644 CA THR 386 63.896 -17.003 -1.201 1.00 0.99 C ATOM 3645 N THR 386 64.340 -18.027 -0.312 1.00 0.99 N ATOM 3648 C THR 386 62.811 -15.970 -0.708 1.00 0.99 C ATOM 3649 O THR 386 63.075 -14.751 -0.817 1.00 0.99 O ATOM 3650 CB THR 386 63.368 -17.666 -2.512 1.00 0.99 C ATOM 3652 OG1 THR 386 64.443 -17.927 -3.497 1.00 0.99 O ATOM 3654 CG2 THR 386 62.432 -18.879 -2.428 1.00 0.99 C ATOM 3658 CA TRP 387 60.471 -15.611 -0.431 1.00 0.99 C ATOM 3659 N TRP 387 61.636 -16.401 -0.327 1.00 0.99 N ATOM 3662 C TRP 387 60.362 -14.153 0.056 1.00 0.99 C ATOM 3663 O TRP 387 59.755 -13.897 1.130 1.00 0.99 O ATOM 3664 CB TRP 387 59.556 -15.915 -1.656 1.00 0.99 C ATOM 3667 CG TRP 387 59.823 -15.266 -3.008 1.00 0.99 C ATOM 3668 CD1 TRP 387 60.945 -14.570 -3.457 1.00 0.99 C ATOM 3669 CD2 TRP 387 58.933 -15.263 -4.081 1.00 0.99 C ATOM 3670 NE1 TRP 387 60.731 -14.160 -4.728 1.00 0.99 N ATOM 3671 CE2 TRP 387 59.516 -14.567 -5.117 1.00 0.99 C ATOM 3672 CE3 TRP 387 57.655 -15.817 -4.212 1.00 0.99 C ATOM 3673 CZ2 TRP 387 58.869 -14.380 -6.341 1.00 0.99 C ATOM 3674 CZ3 TRP 387 56.976 -15.634 -5.432 1.00 0.99 C ATOM 3675 CH2 TRP 387 57.580 -14.920 -6.490 1.00 0.99 H ATOM 3682 CA MET 388 60.020 -12.086 -1.064 1.00 0.99 C ATOM 3683 N MET 388 60.817 -13.224 -0.739 1.00 0.99 N ATOM 3686 C MET 388 60.464 -10.833 -0.275 1.00 0.99 C ATOM 3687 O MET 388 61.308 -10.047 -0.766 1.00 0.99 O ATOM 3688 CB MET 388 58.422 -12.214 -1.012 1.00 0.99 C ATOM 3691 CG MET 388 57.683 -12.465 -2.359 1.00 0.99 C ATOM 3694 SD MET 388 55.896 -12.073 -2.160 1.00 0.99 S ATOM 3695 CE MET 388 55.209 -12.136 -3.854 1.00 0.99 C ATOM 3699 N ASP 389 59.807 -10.579 0.817 1.00 4.40 N ATOM 3700 CA ASP 389 59.305 -9.267 1.023 1.00 3.76 C ATOM 3701 C ASP 389 58.684 -8.627 -0.254 1.00 4.06 C ATOM 3702 O ASP 389 57.450 -8.475 -0.299 1.00 3.31 O ATOM 3703 CB ASP 389 60.361 -8.388 1.693 1.00 2.76 C ATOM 3704 CG ASP 389 60.791 -8.809 3.113 1.00 2.86 C ATOM 3709 OD1 ASP 389 61.639 -8.117 3.734 1.00 0.99 O ATOM 3710 OD2 ASP 389 60.296 -9.829 3.660 1.00 0.99 O ATOM 3711 N ILE 390 59.486 -8.241 -1.223 1.00 4.97 N ATOM 3712 CA ILE 390 59.006 -7.852 -2.514 1.00 3.09 C ATOM 3713 C ILE 390 60.186 -7.699 -3.516 1.00 2.12 C ATOM 3714 O ILE 390 60.005 -8.109 -4.686 1.00 2.30 O ATOM 3715 CB ILE 390 58.084 -6.564 -2.605 1.00 3.03 C ATOM 3719 CG1 ILE 390 57.473 -6.431 -4.057 1.00 0.99 C ATOM 3722 CG2 ILE 390 58.836 -5.256 -2.195 1.00 0.99 C ATOM 3726 CD1 ILE 390 56.244 -5.478 -4.150 1.00 0.99 C ATOM 3730 N GLU 391 61.324 -7.171 -3.123 1.00 1.14 N ATOM 3731 CA GLU 391 62.534 -7.446 -3.819 1.00 0.60 C ATOM 3732 C GLU 391 62.771 -8.973 -3.712 1.00 0.71 C ATOM 3733 O GLU 391 63.565 -9.434 -2.870 1.00 0.84 O ATOM 3734 CB GLU 391 63.740 -6.616 -3.252 1.00 0.32 C ATOM 3735 CG GLU 391 63.733 -5.138 -3.763 1.00 1.16 C ATOM 3736 CD GLU 391 64.986 -4.383 -3.276 1.00 0.96 C ATOM 3737 OE1 GLU 391 65.177 -4.203 -2.046 1.00 0.53 O ATOM 3738 OE2 GLU 391 65.821 -3.943 -4.110 1.00 1.43 O ATOM 3745 N GLY 392 62.011 -9.693 -4.477 1.00 1.36 N ATOM 3746 CA GLY 392 61.868 -11.083 -4.372 1.00 1.49 C ATOM 3747 C GLY 392 62.105 -11.592 -5.787 1.00 1.30 C ATOM 3748 O GLY 392 63.021 -12.413 -6.015 1.00 1.64 O ATOM 3752 N ARG 393 61.360 -11.089 -6.731 1.00 0.97 N ATOM 3753 CA ARG 393 61.705 -11.319 -8.077 1.00 0.87 C ATOM 3754 C ARG 393 63.181 -10.854 -8.251 1.00 0.98 C ATOM 3755 O ARG 393 64.006 -11.757 -8.413 1.00 0.41 O ATOM 3756 CB ARG 393 60.616 -10.750 -9.030 1.00 0.92 C ATOM 3757 CG ARG 393 60.892 -11.139 -10.515 1.00 0.79 C ATOM 3758 CD ARG 393 59.836 -10.504 -11.471 1.00 0.76 C ATOM 3767 NE ARG 393 59.879 -11.130 -12.734 1.00 0.99 N ATOM 3769 CZ ARG 393 59.185 -12.309 -13.021 1.00 0.99 C ATOM 3770 NH1 ARG 393 58.275 -12.808 -12.214 1.00 0.99 H ATOM 3771 NH2 ARG 393 59.451 -12.941 -14.135 1.00 0.99 H ATOM 3776 CA PRO 394 65.036 -9.289 -7.657 1.00 0.99 C ATOM 3777 N PRO 394 63.619 -9.603 -8.008 1.00 0.99 N ATOM 3779 C PRO 394 65.590 -9.945 -6.343 1.00 0.99 C ATOM 3780 O PRO 394 66.220 -9.232 -5.539 1.00 0.99 O ATOM 3781 CB PRO 394 65.097 -7.731 -7.573 1.00 0.99 C ATOM 3784 CG PRO 394 63.955 -7.261 -8.497 1.00 0.99 C ATOM 3787 CD PRO 394 62.878 -8.366 -8.334 1.00 0.99 C ATOM 3790 N GLU 395 65.410 -11.222 -6.146 1.00 2.02 N ATOM 3791 CA GLU 395 66.369 -12.042 -5.494 1.00 2.50 C ATOM 3792 C GLU 395 66.884 -12.993 -6.622 1.00 3.24 C ATOM 3793 O GLU 395 68.035 -13.471 -6.550 1.00 3.70 O ATOM 3794 CB GLU 395 65.709 -12.809 -4.278 1.00 2.60 C ATOM 3799 CG GLU 395 66.505 -12.607 -2.949 1.00 0.99 C ATOM 3802 CD GLU 395 65.696 -13.112 -1.738 1.00 0.99 C ATOM 3803 OE1 GLU 395 64.613 -12.544 -1.435 1.00 0.99 O ATOM 3804 OE2 GLU 395 66.121 -14.065 -1.035 1.00 0.99 O ATOM 3805 N ASP 396 66.103 -13.227 -7.654 1.00 1.48 N ATOM 3806 CA ASP 396 66.584 -13.566 -8.943 1.00 1.49 C ATOM 3807 C ASP 396 67.139 -14.999 -9.023 1.00 1.93 C ATOM 3808 O ASP 396 68.345 -15.205 -8.855 1.00 1.35 O ATOM 3809 CB ASP 396 67.599 -12.496 -9.451 1.00 1.28 C ATOM 3810 CG ASP 396 67.819 -12.599 -10.972 1.00 2.18 C ATOM 3811 OD1 ASP 396 68.962 -12.863 -11.429 1.00 3.58 O ATOM 3812 OD2 ASP 396 66.857 -12.408 -11.762 1.00 2.13 O ATOM 3817 CA PRO 397 65.472 -16.246 -7.840 1.00 0.99 C ATOM 3818 N PRO 397 66.318 -16.037 -9.034 1.00 0.99 N ATOM 3820 C PRO 397 66.336 -16.635 -6.599 1.00 0.99 C ATOM 3821 O PRO 397 65.872 -17.484 -5.828 1.00 0.99 O ATOM 3822 CB PRO 397 64.389 -17.262 -8.300 1.00 0.99 C ATOM 3825 CG PRO 397 64.223 -16.987 -9.816 1.00 0.99 C ATOM 3828 CD PRO 397 65.597 -16.430 -10.265 1.00 0.99 C ATOM 3831 N VAL 398 67.513 -16.077 -6.410 1.00 2.11 N ATOM 3832 CA VAL 398 68.563 -16.630 -5.641 1.00 2.32 C ATOM 3833 C VAL 398 68.822 -18.100 -6.010 1.00 1.48 C ATOM 3834 O VAL 398 69.145 -18.897 -5.106 1.00 1.29 O ATOM 3835 CB VAL 398 68.508 -16.199 -4.131 1.00 3.08 C ATOM 3839 CG1 VAL 398 67.244 -16.691 -3.374 1.00 0.99 C ATOM 3840 CG2 VAL 398 69.814 -16.540 -3.343 1.00 0.99 C ATOM 3847 N GLU 399 68.692 -18.421 -7.284 1.00 1.44 N ATOM 3848 CA GLU 399 67.873 -19.529 -7.639 1.00 0.29 C ATOM 3849 C GLU 399 68.346 -20.866 -7.020 1.00 1.73 C ATOM 3850 O GLU 399 69.575 -21.162 -6.994 1.00 1.24 O ATOM 3851 CB GLU 399 67.544 -19.624 -9.174 1.00 0.62 C ATOM 3856 CG GLU 399 68.534 -18.834 -10.100 1.00 0.99 C ATOM 3859 CD GLU 399 68.269 -19.057 -11.604 1.00 0.99 C ATOM 3860 OE1 GLU 399 67.322 -19.792 -11.988 1.00 0.99 O ATOM 3861 OE2 GLU 399 69.003 -18.490 -12.454 1.00 0.99 O ATOM 3862 CA ILE 400 67.264 -21.384 -5.039 1.00 0.99 C ATOM 3863 N ILE 400 67.400 -21.572 -6.436 1.00 0.99 N ATOM 3866 C ILE 400 68.440 -22.071 -4.261 1.00 0.99 C ATOM 3867 O ILE 400 69.556 -21.519 -4.361 1.00 0.99 O ATOM 3868 CB ILE 400 65.744 -21.510 -4.613 1.00 0.99 C ATOM 3870 CG1 ILE 400 65.300 -22.957 -4.300 1.00 0.99 C ATOM 3873 CG2 ILE 400 64.731 -20.860 -5.621 1.00 0.99 C ATOM 3877 CD1 ILE 400 65.476 -23.182 -2.784 1.00 0.99 C ATOM 3881 CA ALA 401 69.390 -23.965 -3.191 1.00 0.99 C ATOM 3882 N ALA 401 68.297 -23.230 -3.666 1.00 0.99 N ATOM 3885 C ALA 401 70.522 -24.308 -4.148 1.00 0.99 C ATOM 3886 O ALA 401 71.332 -25.196 -3.788 1.00 0.99 O ATOM 3887 CB ALA 401 69.865 -23.577 -1.791 1.00 0.99 C ATOM 3891 N LEU 402 70.560 -23.746 -5.339 1.00 1.77 N ATOM 3892 CA LEU 402 70.258 -24.608 -6.415 1.00 1.39 C ATOM 3893 C LEU 402 71.164 -24.316 -7.634 1.00 0.89 C ATOM 3894 O LEU 402 71.912 -25.231 -8.036 1.00 1.23 O ATOM 3895 CB LEU 402 68.689 -24.687 -6.637 1.00 1.35 C ATOM 3900 CG LEU 402 68.080 -24.621 -8.081 1.00 0.99 C ATOM 3901 CD1 LEU 402 68.477 -25.878 -8.992 1.00 0.99 C ATOM 3902 CD2 LEU 402 66.529 -24.583 -8.025 1.00 0.99 C ATOM 3910 N TYR 403 71.102 -23.190 -8.241 1.00 0.66 N ATOM 3911 CA TYR 403 70.997 -23.212 -9.652 1.00 1.65 C ATOM 3912 C TYR 403 72.130 -23.926 -10.450 1.00 2.51 C ATOM 3913 O TYR 403 73.302 -23.496 -10.416 1.00 2.16 O ATOM 3914 CB TYR 403 70.636 -21.801 -10.189 1.00 2.00 C ATOM 3915 CG TYR 403 70.121 -21.865 -11.627 1.00 1.34 C ATOM 3916 CZ TYR 403 69.181 -22.019 -14.274 1.00 1.97 C ATOM 3921 CD1 TYR 403 68.927 -22.551 -11.923 1.00 0.99 C ATOM 3922 CD2 TYR 403 70.829 -21.243 -12.669 1.00 0.99 C ATOM 3925 CE1 TYR 403 68.465 -22.636 -13.241 1.00 0.99 C ATOM 3926 CE2 TYR 403 70.359 -21.318 -13.987 1.00 0.99 C ATOM 3929 OH TYR 403 68.749 -22.096 -15.503 1.00 0.99 H ATOM 3931 CA GLN 404 72.652 -25.942 -11.609 1.00 0.99 C ATOM 3932 N GLN 404 71.760 -25.006 -11.101 1.00 0.99 N ATOM 3935 C GLN 404 71.992 -27.334 -11.520 1.00 0.99 C ATOM 3936 O GLN 404 70.761 -27.391 -11.432 1.00 0.99 O ATOM 3937 CB GLN 404 73.191 -25.515 -12.993 1.00 0.99 C ATOM 3940 CG GLN 404 72.065 -25.352 -14.072 1.00 0.99 C ATOM 3943 CD GLN 404 71.272 -26.656 -14.331 1.00 0.99 C ATOM 3944 OE1 GLN 404 70.070 -26.666 -14.201 1.00 0.99 O ATOM 3945 NE2 GLN 404 71.928 -27.819 -14.699 1.00 0.99 N ATOM 3948 CA PRO 405 74.116 -28.583 -11.110 1.00 0.99 C ATOM 3949 N PRO 405 72.690 -28.491 -11.507 1.00 0.99 N ATOM 3951 C PRO 405 75.112 -28.146 -12.199 1.00 0.99 C ATOM 3952 O PRO 405 75.199 -28.803 -13.258 1.00 0.99 O ATOM 3953 CB PRO 405 74.387 -30.068 -10.759 1.00 0.99 C ATOM 3956 CG PRO 405 73.001 -30.656 -10.458 1.00 0.99 C ATOM 3959 CD PRO 405 72.047 -29.820 -11.345 1.00 0.99 C ATOM 3962 CA SER 406 77.194 -27.066 -12.298 1.00 0.99 C ATOM 3963 N SER 406 75.832 -27.093 -11.946 1.00 0.99 N ATOM 3966 C SER 406 77.891 -26.744 -10.968 1.00 0.99 C ATOM 3967 O SER 406 78.651 -27.588 -10.446 1.00 0.99 O ATOM 3968 CB SER 406 77.474 -25.961 -13.358 1.00 0.99 C ATOM 3971 OG SER 406 76.806 -26.314 -14.660 1.00 0.99 O ATOM 3973 CA SER 407 78.087 -25.169 -9.191 1.00 0.99 C ATOM 3974 N SER 407 77.588 -25.599 -10.430 1.00 0.99 N ATOM 3977 C SER 407 77.602 -26.061 -8.014 1.00 0.99 C ATOM 3978 O SER 407 76.718 -25.617 -7.255 1.00 0.99 O ATOM 3979 CB SER 407 77.628 -23.682 -9.030 1.00 0.99 C ATOM 3982 OG SER 407 78.208 -23.091 -7.773 1.00 0.99 O ATOM 3984 N GLY 408 78.143 -27.241 -7.850 1.00 0.68 N ATOM 3985 CA GLY 408 78.319 -27.757 -6.542 1.00 1.19 C ATOM 3986 C GLY 408 77.855 -29.210 -6.364 1.00 1.42 C ATOM 3987 O GLY 408 78.506 -29.913 -5.562 1.00 1.98 O ATOM 3991 CA CYS 409 76.673 -31.037 -7.340 1.00 0.99 C ATOM 3992 N CYS 409 76.833 -29.657 -7.045 1.00 0.99 N ATOM 3995 C CYS 409 77.191 -31.281 -8.768 1.00 0.99 C ATOM 3996 O CYS 409 77.601 -30.295 -9.419 1.00 0.99 O ATOM 3997 CB CYS 409 75.191 -31.451 -7.106 1.00 0.99 C ATOM 4000 SG CYS 409 74.828 -33.232 -7.358 1.00 0.99 S ATOM 4002 N TYR 410 77.260 -32.530 -9.207 1.00 0.90 N ATOM 4003 CA TYR 410 77.981 -32.914 -10.367 1.00 0.60 C ATOM 4004 C TYR 410 79.486 -32.667 -10.121 1.00 0.38 C ATOM 4005 O TYR 410 80.269 -33.630 -10.233 1.00 0.45 O ATOM 4006 CB TYR 410 77.420 -32.322 -11.711 1.00 0.86 C ATOM 4011 CG TYR 410 76.053 -32.867 -12.147 1.00 0.99 C ATOM 4012 CD1 TYR 410 75.578 -32.500 -13.420 1.00 0.99 C ATOM 4013 CD2 TYR 410 75.242 -33.692 -11.337 1.00 0.99 C ATOM 4016 CE1 TYR 410 74.322 -32.932 -13.868 1.00 0.99 C ATOM 4017 CE2 TYR 410 73.989 -34.125 -11.787 1.00 0.99 C ATOM 4020 CZ TYR 410 73.527 -33.743 -13.051 1.00 0.99 C ATOM 4021 OH TYR 410 72.354 -34.142 -13.464 1.00 0.99 H ATOM 4023 N ILE 411 79.870 -31.481 -9.731 1.00 0.58 N ATOM 4024 CA ILE 411 80.960 -31.344 -8.846 1.00 1.32 C ATOM 4025 C ILE 411 80.803 -32.286 -7.592 1.00 2.09 C ATOM 4026 O ILE 411 81.544 -33.293 -7.586 1.00 2.54 O ATOM 4027 CB ILE 411 81.296 -29.814 -8.617 1.00 0.99 C ATOM 4031 CG1 ILE 411 82.348 -29.301 -9.674 1.00 0.99 C ATOM 4034 CG2 ILE 411 81.780 -29.490 -7.172 1.00 0.99 C ATOM 4038 CD1 ILE 411 83.819 -29.779 -9.424 1.00 0.99 C ATOM 4042 CA HIS 412 79.756 -33.030 -5.582 1.00 0.99 C ATOM 4043 N HIS 412 79.943 -32.047 -6.602 1.00 0.99 N ATOM 4046 C HIS 412 78.341 -33.110 -4.919 1.00 0.99 C ATOM 4047 O HIS 412 77.683 -34.158 -5.108 1.00 0.99 O ATOM 4048 CB HIS 412 80.892 -32.954 -4.504 1.00 0.99 C ATOM 4051 CG HIS 412 80.843 -31.791 -3.491 1.00 0.99 C ATOM 4052 ND1 HIS 412 80.859 -30.383 -3.795 1.00 0.99 N ATOM 4053 CD2 HIS 412 80.817 -31.906 -2.123 1.00 0.99 C ATOM 4054 CE1 HIS 412 80.851 -29.720 -2.657 1.00 0.99 C ATOM 4055 NE2 HIS 412 80.804 -30.591 -1.482 1.00 0.99 N ATOM 4059 CA PHE 413 76.886 -32.345 -3.185 1.00 0.99 C ATOM 4060 N PHE 413 77.888 -32.122 -4.180 1.00 0.99 N ATOM 4063 C PHE 413 75.608 -31.471 -3.348 1.00 0.99 C ATOM 4064 O PHE 413 75.648 -30.257 -3.066 1.00 0.99 O ATOM 4065 CB PHE 413 77.518 -32.105 -1.773 1.00 0.99 C ATOM 4068 CG PHE 413 76.536 -32.290 -0.621 1.00 0.99 C ATOM 4069 CD1 PHE 413 76.143 -31.193 0.167 1.00 0.99 C ATOM 4070 CD2 PHE 413 76.031 -33.568 -0.320 1.00 0.99 C ATOM 4071 CE1 PHE 413 75.260 -31.372 1.239 1.00 0.99 C ATOM 4072 CE2 PHE 413 75.161 -33.747 0.763 1.00 0.99 C ATOM 4073 CZ PHE 413 74.775 -32.648 1.542 1.00 0.99 C ATOM 4079 CA PHE 414 73.220 -31.610 -3.435 1.00 0.99 C ATOM 4080 N PHE 414 74.521 -32.090 -3.717 1.00 0.99 N ATOM 4083 C PHE 414 72.802 -30.267 -4.119 1.00 0.99 C ATOM 4084 O PHE 414 73.074 -30.127 -5.341 1.00 0.99 O ATOM 4085 CB PHE 414 72.855 -31.746 -1.903 1.00 0.99 C ATOM 4088 CG PHE 414 72.577 -33.160 -1.376 1.00 0.99 C ATOM 4089 CD1 PHE 414 72.772 -34.338 -2.130 1.00 0.99 C ATOM 4090 CD2 PHE 414 72.071 -33.277 -0.069 1.00 0.99 C ATOM 4091 CE1 PHE 414 72.452 -35.590 -1.588 1.00 0.99 C ATOM 4092 CE2 PHE 414 71.763 -34.529 0.475 1.00 0.99 C ATOM 4093 CZ PHE 414 71.945 -35.686 -0.288 1.00 0.99 C ATOM 4099 CA ARG 415 70.541 -29.737 -3.751 1.00 0.99 C ATOM 4100 N ARG 415 71.929 -29.483 -3.492 1.00 0.99 N ATOM 4103 C ARG 415 70.306 -31.127 -4.429 1.00 0.99 C ATOM 4104 O ARG 415 69.778 -32.008 -3.737 1.00 0.99 O ATOM 4105 CB ARG 415 69.757 -28.546 -4.489 1.00 0.99 C ATOM 4108 CG ARG 415 69.816 -28.573 -6.079 1.00 0.99 C ATOM 4111 CD ARG 415 70.701 -28.228 -7.363 1.00 0.99 C ATOM 4114 NE ARG 415 72.054 -28.682 -7.449 1.00 0.99 N ATOM 4116 CZ ARG 415 73.140 -27.896 -7.062 1.00 0.99 C ATOM 4117 NH1 ARG 415 74.306 -28.122 -7.603 1.00 0.99 H ATOM 4118 NH2 ARG 415 73.036 -26.946 -6.162 1.00 0.99 H ATOM 4123 CA GLU 416 70.334 -32.395 -6.490 1.00 0.99 C ATOM 4124 N GLU 416 70.769 -31.342 -5.647 1.00 0.99 N ATOM 4127 C GLU 416 70.752 -33.776 -5.938 1.00 0.99 C ATOM 4128 O GLU 416 71.943 -34.070 -5.788 1.00 0.99 O ATOM 4129 CB GLU 416 70.908 -32.169 -7.936 1.00 0.99 C ATOM 4132 CG GLU 416 70.069 -32.817 -9.086 1.00 0.99 C ATOM 4135 CD GLU 416 69.976 -34.351 -8.995 1.00 0.99 C ATOM 4136 OE1 GLU 416 71.022 -35.050 -9.024 1.00 0.99 O ATOM 4137 OE2 GLU 416 68.851 -34.910 -8.909 1.00 0.99 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 428 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 99.69 23.1 104 27.3 381 ARMSMC SECONDARY STRUCTURE . . 102.48 16.7 60 31.6 190 ARMSMC SURFACE . . . . . . . . 96.11 31.0 42 21.5 195 ARMSMC BURIED . . . . . . . . 102.05 17.7 62 33.3 186 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 98.64 25.5 47 28.5 165 ARMSSC1 RELIABLE SIDE CHAINS . 98.04 26.1 46 30.1 153 ARMSSC1 SECONDARY STRUCTURE . . 92.08 35.7 28 32.9 85 ARMSSC1 SURFACE . . . . . . . . 105.23 14.3 21 24.7 85 ARMSSC1 BURIED . . . . . . . . 92.97 34.6 26 32.5 80 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 85.25 20.5 39 32.0 122 ARMSSC2 RELIABLE SIDE CHAINS . 82.01 19.4 31 32.3 96 ARMSSC2 SECONDARY STRUCTURE . . 85.39 24.0 25 38.5 65 ARMSSC2 SURFACE . . . . . . . . 94.65 6.2 16 24.6 65 ARMSSC2 BURIED . . . . . . . . 78.04 30.4 23 40.4 57 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 89.48 21.4 14 29.8 47 ARMSSC3 RELIABLE SIDE CHAINS . 79.94 27.3 11 29.7 37 ARMSSC3 SECONDARY STRUCTURE . . 82.09 33.3 9 39.1 23 ARMSSC3 SURFACE . . . . . . . . 95.83 0.0 9 28.1 32 ARMSSC3 BURIED . . . . . . . . 76.74 60.0 5 33.3 15 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 77.08 75.0 4 18.2 22 ARMSSC4 RELIABLE SIDE CHAINS . 77.08 75.0 4 18.2 22 ARMSSC4 SECONDARY STRUCTURE . . 14.85 100.0 1 12.5 8 ARMSSC4 SURFACE . . . . . . . . 77.08 75.0 4 20.0 20 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 10.31 (Number of atoms: 53) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 10.31 53 27.5 193 CRMSCA CRN = ALL/NP . . . . . 0.1945 CRMSCA SECONDARY STRUCTURE . . 10.11 30 31.6 95 CRMSCA SURFACE . . . . . . . . 10.57 22 22.0 100 CRMSCA BURIED . . . . . . . . 10.12 31 33.3 93 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 10.51 262 27.4 955 CRMSMC SECONDARY STRUCTURE . . 10.24 150 31.6 475 CRMSMC SURFACE . . . . . . . . 10.71 109 22.1 493 CRMSMC BURIED . . . . . . . . 10.36 153 33.1 462 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 12.73 216 28.8 751 CRMSSC RELIABLE SIDE CHAINS . 12.96 190 29.5 645 CRMSSC SECONDARY STRUCTURE . . 12.61 141 35.2 400 CRMSSC SURFACE . . . . . . . . 12.28 91 23.6 386 CRMSSC BURIED . . . . . . . . 13.04 125 34.2 365 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 11.61 428 28.1 1523 CRMSALL SECONDARY STRUCTURE . . 11.52 261 33.5 780 CRMSALL SURFACE . . . . . . . . 11.48 179 22.8 786 CRMSALL BURIED . . . . . . . . 11.71 249 33.8 737 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.814 0.710 0.355 53 27.5 193 ERRCA SECONDARY STRUCTURE . . 7.869 0.718 0.359 30 31.6 95 ERRCA SURFACE . . . . . . . . 7.839 0.700 0.350 22 22.0 100 ERRCA BURIED . . . . . . . . 7.797 0.717 0.358 31 33.3 93 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 7.961 0.708 0.355 262 27.4 955 ERRMC SECONDARY STRUCTURE . . 8.016 0.722 0.361 150 31.6 475 ERRMC SURFACE . . . . . . . . 7.906 0.703 0.354 109 22.1 493 ERRMC BURIED . . . . . . . . 8.000 0.712 0.356 153 33.1 462 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 10.370 0.784 0.392 216 28.8 751 ERRSC RELIABLE SIDE CHAINS . 10.579 0.787 0.394 190 29.5 645 ERRSC SECONDARY STRUCTURE . . 10.413 0.794 0.397 141 35.2 400 ERRSC SURFACE . . . . . . . . 9.971 0.792 0.396 91 23.6 386 ERRSC BURIED . . . . . . . . 10.661 0.778 0.389 125 34.2 365 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 9.092 0.742 0.372 428 28.1 1523 ERRALL SECONDARY STRUCTURE . . 9.241 0.757 0.379 261 33.5 780 ERRALL SURFACE . . . . . . . . 8.865 0.743 0.373 179 22.8 786 ERRALL BURIED . . . . . . . . 9.256 0.742 0.371 249 33.8 737 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 0 2 10 33 53 193 DISTCA CA (P) 0.00 0.00 1.04 5.18 17.10 193 DISTCA CA (RMS) 0.00 0.00 2.84 3.95 6.77 DISTCA ALL (N) 0 5 11 63 219 428 1523 DISTALL ALL (P) 0.00 0.33 0.72 4.14 14.38 1523 DISTALL ALL (RMS) 0.00 1.48 2.17 3.95 6.79 DISTALL END of the results output