####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 115 ( 460), selected 113 , name T0529AL285_1 # Molecule2: number of CA atoms 515 ( 4030), selected 113 , name T0529.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0529AL285_1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 81 408 - 491 4.95 8.36 LCS_AVERAGE: 12.30 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 428 - 450 1.96 10.37 LONGEST_CONTINUOUS_SEGMENT: 23 429 - 451 1.97 10.66 LCS_AVERAGE: 2.71 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 429 - 443 0.77 9.82 LONGEST_CONTINUOUS_SEGMENT: 15 526 - 540 0.32 9.13 LCS_AVERAGE: 1.73 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 113 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT G 408 G 408 10 16 81 8 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT C 409 C 409 10 16 81 7 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT Y 410 Y 410 10 16 81 7 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT I 411 I 411 10 16 81 13 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT H 412 H 412 10 16 81 13 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT F 413 F 413 10 16 81 13 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT F 414 F 414 10 16 81 5 24 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT R 415 R 415 10 16 81 7 24 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT E 416 E 416 10 16 81 4 17 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT P 417 P 417 10 16 81 4 11 32 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT T 418 T 418 10 16 81 3 6 17 36 47 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT D 419 D 419 10 16 81 3 8 17 37 47 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT L 420 L 420 6 16 81 3 24 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT K 421 K 421 4 16 81 3 4 4 5 6 9 27 59 69 75 77 80 83 87 90 93 95 97 99 101 LCS_GDT Q 422 Q 422 4 22 81 5 8 24 40 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT Q 425 Q 425 6 22 81 5 12 34 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT D 426 D 426 6 22 81 5 5 6 12 37 45 55 67 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT A 427 A 427 6 22 81 5 5 11 25 40 49 54 65 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT K 428 K 428 6 23 81 5 5 6 7 45 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT Y 429 Y 429 15 23 81 5 6 30 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT S 430 S 430 15 23 81 10 25 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT H 431 H 431 15 23 81 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT G 432 G 432 15 23 81 13 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT I 433 I 433 15 23 81 10 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT D 434 D 434 15 23 81 7 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT V 435 V 435 15 23 81 9 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT T 436 T 436 15 23 81 13 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT D 437 D 437 15 23 81 10 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT L 438 L 438 15 23 81 10 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT F 439 F 439 15 23 81 10 28 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT A 440 A 440 15 23 81 7 25 34 43 49 55 64 69 75 76 77 80 83 87 90 92 95 97 99 101 LCS_GDT T 441 T 441 15 23 81 10 25 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT Q 442 Q 442 15 23 81 10 25 34 43 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT P 443 P 443 15 23 81 7 24 34 42 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT G 444 G 444 10 23 81 3 9 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT L 445 L 445 10 23 81 4 22 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT T 446 T 446 10 23 81 8 10 11 14 29 47 61 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT S 447 S 447 10 23 81 8 10 11 14 27 39 52 64 72 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT A 448 A 448 10 23 81 8 10 11 27 36 49 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT V 449 V 449 10 23 81 8 18 33 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT I 450 I 450 10 23 81 8 10 21 39 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT D 451 D 451 10 23 81 8 10 11 14 33 45 52 64 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT A 452 A 452 10 17 81 8 10 11 21 29 44 59 68 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT L 453 L 453 10 17 81 8 10 21 38 46 54 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT P 454 P 454 3 17 81 3 16 31 43 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT R 455 R 455 3 17 81 3 12 28 38 47 54 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT N 456 N 456 6 14 81 4 5 6 15 21 32 56 66 75 76 77 79 81 83 90 92 95 97 99 101 LCS_GDT M 457 M 457 6 14 81 4 5 6 21 42 52 64 69 75 76 77 80 81 86 90 92 95 97 99 101 LCS_GDT V 458 V 458 6 9 81 4 5 6 13 25 47 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT I 459 I 459 6 9 81 4 7 9 34 46 52 64 69 75 76 77 80 82 87 90 93 95 97 99 101 LCS_GDT T 460 T 460 6 9 81 3 5 11 21 38 50 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT C 461 C 461 6 9 81 3 5 8 25 42 52 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT Q 462 Q 462 3 9 81 3 8 15 30 43 52 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT G 463 G 463 8 9 81 3 14 27 40 47 55 60 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT S 464 S 464 8 9 81 7 7 21 40 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT D 465 D 465 8 9 81 7 7 8 13 23 54 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT D 466 D 466 8 9 81 7 7 17 39 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT I 467 I 467 8 9 81 7 7 31 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT R 468 R 468 8 9 81 7 7 8 24 38 52 63 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT K 469 K 469 8 9 81 7 7 8 15 28 44 55 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT L 470 L 470 8 9 81 7 24 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT L 471 L 471 5 9 81 5 5 6 6 18 26 37 45 60 68 76 80 83 87 90 93 95 97 99 101 LCS_GDT E 472 E 472 5 6 81 5 5 6 7 27 34 50 59 71 75 77 80 83 87 90 93 95 97 99 101 LCS_GDT S 473 S 473 5 6 81 5 5 18 40 47 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT Q 474 Q 474 5 6 81 5 5 6 8 13 21 35 45 61 68 74 80 83 87 90 93 95 97 99 101 LCS_GDT G 475 G 475 5 6 81 5 5 6 7 18 26 37 45 55 67 74 80 83 87 90 93 95 97 99 101 LCS_GDT R 476 R 476 4 5 81 3 4 4 4 5 10 17 26 33 42 52 57 72 82 87 90 95 97 99 101 LCS_GDT K 477 K 477 4 5 81 3 4 4 4 5 6 11 24 33 42 48 57 65 83 87 93 95 97 99 101 LCS_GDT D 478 D 478 4 5 81 3 4 4 4 8 14 20 30 38 46 58 68 79 83 87 93 95 97 99 101 LCS_GDT I 479 I 479 3 5 81 3 3 3 5 8 17 22 30 38 49 62 75 82 84 89 93 95 97 99 101 LCS_GDT L 481 L 481 6 8 81 3 4 6 13 20 24 31 38 48 61 70 77 83 87 90 93 95 97 99 101 LCS_GDT I 482 I 482 6 8 81 3 4 6 7 20 24 31 38 48 61 74 77 82 87 90 93 95 97 99 101 LCS_GDT D 483 D 483 6 8 81 3 4 6 7 8 14 19 30 48 58 70 74 82 86 90 93 95 97 99 101 LCS_GDT I 484 I 484 6 8 81 3 4 6 7 20 24 31 38 48 66 74 77 83 87 90 93 95 97 99 101 LCS_GDT A 485 A 485 6 8 81 3 4 6 7 13 17 23 38 48 66 74 77 82 87 90 93 95 97 99 101 LCS_GDT L 486 L 486 6 8 81 3 4 6 7 20 24 31 40 49 67 74 77 83 87 90 93 95 97 99 101 LCS_GDT S 487 S 487 7 8 81 7 7 7 8 13 17 22 32 48 66 74 77 82 86 90 93 95 97 99 101 LCS_GDT K 488 K 488 7 8 81 7 7 7 8 13 17 31 38 49 64 72 77 83 87 90 93 95 97 99 101 LCS_GDT T 489 T 489 7 8 81 7 7 7 8 8 9 17 21 29 44 52 59 72 83 87 93 95 97 99 101 LCS_GDT D 490 D 490 7 8 81 7 7 7 8 11 13 26 30 42 60 69 77 82 86 90 93 95 97 99 101 LCS_GDT S 491 S 491 7 8 81 7 7 7 8 9 10 21 33 46 64 72 77 83 87 90 93 95 97 99 101 LCS_GDT R 492 R 492 7 8 33 7 7 7 8 8 11 13 18 20 31 43 55 68 76 87 93 95 97 99 101 LCS_GDT K 493 K 493 7 8 33 7 7 7 8 8 9 13 16 20 23 30 43 50 63 77 88 93 97 99 101 LCS_GDT Y 494 Y 494 3 8 32 3 3 3 8 8 11 13 17 20 22 28 39 47 59 71 84 93 97 99 101 LCS_GDT Q 501 Q 501 3 7 14 2 3 4 4 7 10 12 13 14 15 19 21 28 30 35 42 48 55 58 59 LCS_GDT Y 502 Y 502 6 7 14 4 4 6 8 9 10 10 11 16 17 23 25 30 52 55 64 89 95 99 101 LCS_GDT K 503 K 503 6 7 14 4 4 6 8 9 10 11 13 16 20 25 35 48 60 73 87 93 96 99 101 LCS_GDT D 504 D 504 6 7 14 4 4 6 8 9 10 10 11 11 12 16 18 19 21 32 38 43 50 58 70 LCS_GDT L 505 L 505 6 7 14 4 4 6 8 9 10 10 11 11 13 16 18 19 20 31 35 48 55 64 73 LCS_GDT C 506 C 506 6 7 14 3 4 6 8 9 10 10 11 11 16 17 23 27 33 41 54 65 72 80 89 LCS_GDT H 507 H 507 6 7 14 3 3 6 8 9 10 10 11 11 12 14 16 23 27 33 42 49 56 66 71 LCS_GDT M 508 M 508 4 5 14 3 3 5 5 5 7 8 10 11 12 13 15 18 20 21 23 25 27 28 30 LCS_GDT H 509 H 509 4 5 14 3 3 5 5 5 7 8 10 11 12 13 15 17 25 28 34 35 39 41 49 LCS_GDT T 510 T 510 3 5 14 3 3 4 4 5 7 8 9 9 12 18 18 22 25 28 34 39 41 54 58 LCS_GDT K 522 K 522 3 3 19 0 3 3 3 3 5 6 12 15 21 25 31 33 39 47 51 66 72 77 84 LCS_GDT E 523 E 523 3 5 19 1 3 4 4 10 11 13 15 20 35 41 49 61 68 73 79 83 87 95 97 LCS_GDT E 524 E 524 3 5 19 1 3 4 4 5 9 13 26 30 37 50 55 74 77 81 86 91 94 97 98 LCS_GDT I 525 I 525 3 16 19 1 3 8 10 16 21 36 53 61 66 74 76 82 87 90 92 94 97 99 100 LCS_GDT T 526 T 526 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT P 527 P 527 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT H 528 H 528 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT C 529 C 529 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT A 530 A 530 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT L 531 L 531 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT M 532 M 532 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT D 533 D 533 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT C 534 C 534 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT I 535 I 535 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT M 536 M 536 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT F 537 F 537 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT D 538 D 538 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT A 539 A 539 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_GDT A 540 A 540 15 16 19 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 LCS_AVERAGE LCS_A: 5.58 ( 1.73 2.71 12.30 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 29 36 44 49 55 64 69 75 76 77 80 83 87 90 93 95 97 99 101 GDT PERCENT_AT 2.91 5.63 6.99 8.54 9.51 10.68 12.43 13.40 14.56 14.76 14.95 15.53 16.12 16.89 17.48 18.06 18.45 18.83 19.22 19.61 GDT RMS_LOCAL 0.31 0.68 0.87 1.18 1.35 1.64 2.08 2.27 2.58 2.63 2.68 3.02 3.58 3.82 3.98 4.60 4.65 4.73 5.00 5.49 GDT RMS_ALL_AT 9.11 9.24 9.27 9.30 9.42 9.28 9.46 9.45 9.47 9.46 9.45 9.26 8.82 8.78 8.81 8.42 8.45 8.47 8.38 8.22 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA G 408 G 408 2.225 0 0.082 0.082 2.456 66.786 66.786 LGA C 409 C 409 1.867 2 0.234 0.234 2.530 68.929 45.952 LGA Y 410 Y 410 0.939 8 0.120 0.120 1.100 85.952 28.651 LGA I 411 I 411 0.154 4 0.043 0.043 0.328 100.000 50.000 LGA H 412 H 412 0.279 6 0.080 0.080 0.289 100.000 40.000 LGA F 413 F 413 0.201 7 0.093 0.093 0.548 97.619 35.498 LGA F 414 F 414 1.154 7 0.127 0.127 1.669 79.286 28.831 LGA R 415 R 415 0.882 7 0.054 0.054 0.882 90.476 32.900 LGA E 416 E 416 1.141 5 0.103 0.103 1.681 81.548 36.243 LGA P 417 P 417 1.669 3 0.716 0.716 2.433 75.119 42.925 LGA T 418 T 418 3.034 3 0.347 0.347 3.034 57.262 32.721 LGA D 419 D 419 2.794 4 0.301 0.301 3.328 55.476 27.738 LGA L 420 L 420 1.097 4 0.632 0.632 2.906 71.190 35.595 LGA K 421 K 421 5.306 5 0.638 0.638 5.306 40.952 18.201 LGA Q 422 Q 422 2.607 5 0.637 0.637 3.370 53.571 23.810 LGA Q 425 Q 425 1.381 5 0.035 0.035 1.905 79.286 35.238 LGA D 426 D 426 4.428 4 0.055 0.055 4.428 43.452 21.726 LGA A 427 A 427 4.962 1 0.023 0.023 4.962 37.262 29.810 LGA K 428 K 428 3.097 5 0.029 0.029 3.307 55.476 24.656 LGA Y 429 Y 429 1.612 8 0.086 0.086 2.911 73.333 24.444 LGA S 430 S 430 1.226 2 0.107 0.107 1.226 83.690 55.794 LGA H 431 H 431 1.124 6 0.022 0.022 1.177 85.952 34.381 LGA G 432 G 432 0.752 0 0.046 0.046 0.838 90.476 90.476 LGA I 433 I 433 1.131 4 0.060 0.060 1.581 79.286 39.643 LGA D 434 D 434 1.591 4 0.082 0.082 1.772 75.000 37.500 LGA V 435 V 435 1.449 3 0.038 0.038 1.449 81.429 46.531 LGA T 436 T 436 1.381 3 0.063 0.063 1.479 81.429 46.531 LGA D 437 D 437 1.574 4 0.087 0.087 1.574 77.143 38.571 LGA L 438 L 438 1.603 4 0.041 0.041 1.934 72.857 36.429 LGA F 439 F 439 2.406 7 0.035 0.035 3.127 59.167 21.515 LGA A 440 A 440 2.879 1 0.068 0.068 2.879 57.143 45.714 LGA T 441 T 441 2.104 3 0.051 0.051 2.380 64.762 37.007 LGA Q 442 Q 442 2.702 5 0.192 0.192 3.093 57.262 25.450 LGA P 443 P 443 2.976 3 0.055 0.055 3.815 51.905 29.660 LGA G 444 G 444 1.465 0 0.040 0.040 2.546 69.286 69.286 LGA L 445 L 445 1.094 4 0.049 0.049 1.942 77.143 38.571 LGA T 446 T 446 3.746 3 0.062 0.062 3.930 46.786 26.735 LGA S 447 S 447 5.367 2 0.045 0.045 5.367 30.119 20.079 LGA A 448 A 448 4.482 1 0.063 0.063 4.482 38.690 30.952 LGA V 449 V 449 1.598 3 0.046 0.046 2.204 70.833 40.476 LGA I 450 I 450 2.826 4 0.041 0.041 3.569 53.810 26.905 LGA D 451 D 451 5.852 4 0.033 0.033 6.619 21.905 10.952 LGA A 452 A 452 5.560 1 0.240 0.240 5.560 27.619 22.095 LGA L 453 L 453 3.173 4 0.692 0.692 4.789 43.690 21.845 LGA P 454 P 454 1.990 3 0.097 0.097 2.356 72.976 41.701 LGA R 455 R 455 3.333 7 0.674 0.674 3.692 50.119 18.225 LGA N 456 N 456 5.551 4 0.596 0.596 5.551 35.000 17.500 LGA M 457 M 457 4.338 4 0.146 0.146 5.699 31.786 15.893 LGA V 458 V 458 3.826 3 0.056 0.056 4.076 45.119 25.782 LGA I 459 I 459 3.769 4 0.103 0.103 4.767 42.024 21.012 LGA T 460 T 460 3.588 3 0.066 0.066 4.568 43.690 24.966 LGA C 461 C 461 3.450 2 0.214 0.214 3.992 50.119 33.413 LGA Q 462 Q 462 3.816 5 0.225 0.225 3.816 46.667 20.741 LGA G 463 G 463 3.744 0 0.590 0.590 3.744 51.905 51.905 LGA S 464 S 464 2.927 2 0.073 0.073 2.944 60.952 40.635 LGA D 465 D 465 3.019 4 0.054 0.054 3.019 59.286 29.643 LGA D 466 D 466 2.858 4 0.049 0.049 2.858 64.881 32.440 LGA I 467 I 467 2.056 4 0.065 0.065 2.056 72.976 36.488 LGA R 468 R 468 3.628 7 0.052 0.052 4.199 47.143 17.143 LGA K 469 K 469 3.999 5 0.053 0.053 3.999 46.667 20.741 LGA L 470 L 470 1.510 4 0.033 0.033 1.793 81.667 40.833 LGA L 471 L 471 6.984 4 0.035 0.035 7.226 14.524 7.262 LGA E 472 E 472 6.114 5 0.027 0.027 6.114 24.048 10.688 LGA S 473 S 473 3.309 2 0.038 0.038 3.906 45.000 30.000 LGA Q 474 Q 474 6.685 5 0.141 0.141 9.166 12.024 5.344 LGA G 475 G 475 8.598 0 0.232 0.232 11.195 3.214 3.214 LGA R 476 R 476 12.338 7 0.059 0.059 15.315 0.000 0.000 LGA K 477 K 477 13.264 5 0.162 0.162 14.252 0.000 0.000 LGA D 478 D 478 12.797 4 0.297 0.297 12.984 0.000 0.000 LGA I 479 I 479 11.520 4 0.029 0.029 11.765 0.000 0.000 LGA L 481 L 481 10.234 4 0.641 0.641 11.552 0.714 0.357 LGA I 482 I 482 10.151 4 0.110 0.110 10.292 0.119 0.060 LGA D 483 D 483 10.762 4 0.137 0.137 10.783 0.000 0.000 LGA I 484 I 484 10.206 4 0.640 0.640 11.087 0.000 0.000 LGA A 485 A 485 9.835 1 0.367 0.367 10.509 0.357 0.286 LGA L 486 L 486 9.593 4 0.167 0.167 9.593 1.190 0.595 LGA S 487 S 487 10.356 2 0.699 0.699 10.356 0.833 0.556 LGA K 488 K 488 9.831 5 0.073 0.073 11.676 0.238 0.106 LGA T 489 T 489 15.356 3 0.049 0.049 15.825 0.000 0.000 LGA D 490 D 490 12.965 4 0.070 0.070 13.498 0.000 0.000 LGA S 491 S 491 9.843 2 0.076 0.076 13.049 0.119 0.079 LGA R 492 R 492 15.453 7 0.243 0.243 19.109 0.000 0.000 LGA K 493 K 493 18.807 5 0.024 0.024 21.350 0.000 0.000 LGA Y 494 Y 494 19.041 8 0.244 0.244 21.140 0.000 0.000 LGA Q 501 Q 501 21.548 5 0.637 0.637 21.627 0.000 0.000 LGA Y 502 Y 502 17.608 8 0.283 0.283 18.657 0.000 0.000 LGA K 503 K 503 17.681 5 0.013 0.013 20.273 0.000 0.000 LGA D 504 D 504 24.724 4 0.146 0.146 26.191 0.000 0.000 LGA L 505 L 505 22.814 4 0.080 0.080 22.895 0.000 0.000 LGA C 506 C 506 20.400 2 0.625 0.625 21.901 0.000 0.000 LGA H 507 H 507 25.275 6 0.336 0.336 28.393 0.000 0.000 LGA M 508 M 508 28.503 4 0.130 0.130 29.993 0.000 0.000 LGA H 509 H 509 25.768 6 0.433 0.433 26.007 0.000 0.000 LGA T 510 T 510 26.627 3 0.334 0.334 26.627 0.000 0.000 LGA K 522 K 522 20.162 5 0.587 0.587 22.510 0.000 0.000 LGA E 523 E 523 15.408 5 0.671 0.671 17.277 0.000 0.000 LGA E 524 E 524 12.846 5 0.594 0.594 14.210 0.000 0.000 LGA I 525 I 525 7.642 4 0.553 0.553 9.620 13.810 6.905 LGA T 526 T 526 1.308 3 0.609 0.609 3.003 73.571 42.041 LGA P 527 P 527 1.167 3 0.043 0.043 1.376 88.333 50.476 LGA H 528 H 528 0.897 6 0.123 0.123 1.045 88.214 35.286 LGA C 529 C 529 0.451 2 0.048 0.048 0.614 97.619 65.079 LGA A 530 A 530 0.246 1 0.090 0.090 0.246 100.000 80.000 LGA L 531 L 531 0.227 4 0.054 0.054 0.409 100.000 50.000 LGA M 532 M 532 0.545 4 0.061 0.061 0.545 95.238 47.619 LGA D 533 D 533 0.238 4 0.070 0.070 0.341 100.000 50.000 LGA C 534 C 534 0.571 2 0.087 0.087 1.153 90.595 60.397 LGA I 535 I 535 0.907 4 0.030 0.030 1.227 85.952 42.976 LGA M 536 M 536 1.005 4 0.054 0.054 1.812 81.548 40.774 LGA F 537 F 537 1.464 7 0.040 0.040 2.148 75.119 27.316 LGA D 538 D 538 1.909 4 0.042 0.042 2.271 68.810 34.405 LGA A 539 A 539 1.946 1 0.027 0.027 2.477 68.810 55.048 LGA A 540 A 540 2.321 1 0.056 0.056 3.051 59.167 47.333 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 113 452 452 100.00 894 452 50.56 515 SUMMARY(RMSD_GDC): 7.995 7.997 7.997 10.102 5.550 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 115 515 4.0 69 2.27 11.408 9.554 2.913 LGA_LOCAL RMSD: 2.269 Number of atoms: 69 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.409 Number of assigned atoms: 113 Std_ASGN_ATOMS RMSD: 7.995 Standard rmsd on all 113 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.981418 * X + -0.054735 * Y + 0.183911 * Z + 75.938416 Y_new = 0.187442 * X + -0.478486 * Y + 0.857856 * Z + 0.008295 Z_new = 0.041044 * X + 0.876388 * Y + 0.479854 * Z + -25.517542 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.952874 -0.041056 1.069847 [DEG: 169.1872 -2.3523 61.2977 ] ZXZ: 2.930405 1.070308 0.046800 [DEG: 167.8998 61.3241 2.6814 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0529AL285_1 REMARK 2: T0529.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0529AL285_1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 115 515 4.0 69 2.27 9.554 8.00 REMARK ---------------------------------------------------------- MOLECULE T0529AL285_1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 1j54A ATOM 1 N GLY 408 70.103 -36.598 -0.743 1.00 0.00 N ATOM 2 CA GLY 408 70.486 -36.562 -2.143 1.00 0.00 C ATOM 3 C GLY 408 69.417 -35.944 -3.028 1.00 0.00 C ATOM 4 O GLY 408 69.660 -35.687 -4.207 1.00 0.00 O ATOM 5 N CYS 409 68.232 -35.710 -2.469 1.00 0.00 N ATOM 6 CA CYS 409 67.138 -35.104 -3.228 1.00 0.00 C ATOM 7 C CYS 409 67.186 -33.604 -2.973 1.00 0.00 C ATOM 8 O CYS 409 66.662 -33.102 -1.975 1.00 0.00 O ATOM 9 N TYR 410 67.819 -32.897 -3.900 1.00 0.00 N ATOM 10 CA TYR 410 68.020 -31.463 -3.783 1.00 0.00 C ATOM 11 C TYR 410 67.186 -30.636 -4.757 1.00 0.00 C ATOM 12 O TYR 410 66.409 -31.174 -5.549 1.00 0.00 O ATOM 13 N ILE 411 67.347 -29.320 -4.675 1.00 0.00 N ATOM 14 CA ILE 411 66.643 -28.378 -5.541 1.00 0.00 C ATOM 15 C ILE 411 67.708 -27.422 -6.066 1.00 0.00 C ATOM 16 O ILE 411 68.439 -26.811 -5.282 1.00 0.00 O ATOM 17 N HIS 412 67.808 -27.288 -7.383 1.00 0.00 N ATOM 18 CA HIS 412 68.822 -26.408 -7.951 1.00 0.00 C ATOM 19 C HIS 412 68.369 -25.789 -9.262 1.00 0.00 C ATOM 20 O HIS 412 68.152 -26.498 -10.247 1.00 0.00 O ATOM 21 N PHE 413 68.226 -24.469 -9.274 1.00 0.00 N ATOM 22 CA PHE 413 67.818 -23.768 -10.486 1.00 0.00 C ATOM 23 C PHE 413 68.559 -22.455 -10.687 1.00 0.00 C ATOM 24 O PHE 413 68.965 -21.802 -9.727 1.00 0.00 O ATOM 25 N PHE 414 68.745 -22.093 -11.952 1.00 0.00 N ATOM 26 CA PHE 414 69.356 -20.825 -12.333 1.00 0.00 C ATOM 27 C PHE 414 68.153 -20.061 -12.863 1.00 0.00 C ATOM 28 O PHE 414 67.290 -20.651 -13.517 1.00 0.00 O ATOM 29 N ARG 415 68.083 -18.764 -12.588 1.00 0.00 N ATOM 30 CA ARG 415 66.938 -17.975 -13.017 1.00 0.00 C ATOM 31 C ARG 415 67.289 -16.769 -13.878 1.00 0.00 C ATOM 32 O ARG 415 68.363 -16.184 -13.740 1.00 0.00 O ATOM 33 N GLU 416 66.362 -16.403 -14.761 1.00 0.00 N ATOM 34 CA GLU 416 66.525 -15.250 -15.646 1.00 0.00 C ATOM 35 C GLU 416 66.060 -14.016 -14.871 1.00 0.00 C ATOM 36 O GLU 416 64.877 -13.885 -14.551 1.00 0.00 O ATOM 37 N PRO 417 66.986 -13.094 -14.563 1.00 0.00 N ATOM 38 CA PRO 417 66.673 -11.873 -13.812 1.00 0.00 C ATOM 39 C PRO 417 66.062 -10.701 -14.572 1.00 0.00 C ATOM 40 O PRO 417 65.445 -9.829 -13.966 1.00 0.00 O ATOM 41 N THR 418 66.241 -10.663 -15.884 1.00 0.00 N ATOM 42 CA THR 418 65.695 -9.562 -16.670 1.00 0.00 C ATOM 43 C THR 418 66.301 -8.219 -16.244 1.00 0.00 C ATOM 44 O THR 418 65.666 -7.166 -16.338 1.00 0.00 O ATOM 45 N ASP 419 67.536 -8.286 -15.755 1.00 0.00 N ATOM 46 CA ASP 419 68.317 -7.121 -15.344 1.00 0.00 C ATOM 47 C ASP 419 69.759 -7.611 -15.318 1.00 0.00 C ATOM 48 O ASP 419 70.004 -8.816 -15.297 1.00 0.00 O ATOM 49 N LEU 420 70.717 -6.693 -15.321 1.00 0.00 N ATOM 50 CA LEU 420 72.116 -7.095 -15.324 1.00 0.00 C ATOM 51 C LEU 420 72.660 -7.426 -13.942 1.00 0.00 C ATOM 52 O LEU 420 72.164 -6.936 -12.928 1.00 0.00 O ATOM 53 N LYS 421 73.687 -8.269 -13.919 1.00 0.00 N ATOM 54 CA LYS 421 74.348 -8.645 -12.679 1.00 0.00 C ATOM 55 C LYS 421 75.379 -7.556 -12.392 1.00 0.00 C ATOM 56 O LYS 421 76.145 -7.181 -13.282 1.00 0.00 O ATOM 57 N GLN 422 75.394 -7.034 -11.171 1.00 0.00 N ATOM 58 CA GLN 422 76.362 -5.998 -10.832 1.00 0.00 C ATOM 59 C GLN 422 77.773 -6.568 -10.804 1.00 0.00 C ATOM 60 O GLN 422 77.980 -7.718 -10.418 1.00 0.00 O ATOM 61 N GLN 425 78.764 -5.764 -11.216 1.00 0.00 N ATOM 62 CA GLN 425 80.171 -6.171 -11.249 1.00 0.00 C ATOM 63 C GLN 425 80.651 -6.849 -9.971 1.00 0.00 C ATOM 64 O GLN 425 81.333 -7.870 -10.026 1.00 0.00 O ATOM 65 N ASP 426 80.297 -6.283 -8.822 1.00 0.00 N ATOM 66 CA ASP 426 80.709 -6.853 -7.547 1.00 0.00 C ATOM 67 C ASP 426 80.178 -8.273 -7.392 1.00 0.00 C ATOM 68 O ASP 426 80.906 -9.178 -6.980 1.00 0.00 O ATOM 69 N ALA 427 78.905 -8.462 -7.723 1.00 0.00 N ATOM 70 CA ALA 427 78.282 -9.775 -7.625 1.00 0.00 C ATOM 71 C ALA 427 78.963 -10.752 -8.576 1.00 0.00 C ATOM 72 O ALA 427 79.238 -11.895 -8.212 1.00 0.00 O ATOM 73 N LYS 428 79.240 -10.300 -9.796 1.00 0.00 N ATOM 74 CA LYS 428 79.894 -11.152 -10.781 1.00 0.00 C ATOM 75 C LYS 428 81.270 -11.584 -10.288 1.00 0.00 C ATOM 76 O LYS 428 81.728 -12.685 -10.585 1.00 0.00 O ATOM 77 N TYR 429 81.929 -10.710 -9.535 1.00 0.00 N ATOM 78 CA TYR 429 83.242 -11.041 -9.016 1.00 0.00 C ATOM 79 C TYR 429 83.172 -12.148 -7.984 1.00 0.00 C ATOM 80 O TYR 429 84.176 -12.790 -7.675 1.00 0.00 O ATOM 81 N SER 430 81.977 -12.386 -7.455 1.00 0.00 N ATOM 82 CA SER 430 81.783 -13.414 -6.443 1.00 0.00 C ATOM 83 C SER 430 81.380 -14.780 -7.001 1.00 0.00 C ATOM 84 O SER 430 81.969 -15.799 -6.644 1.00 0.00 O ATOM 85 N HIS 431 80.382 -14.800 -7.880 1.00 0.00 N ATOM 86 CA HIS 431 79.894 -16.060 -8.436 1.00 0.00 C ATOM 87 C HIS 431 80.269 -16.339 -9.887 1.00 0.00 C ATOM 88 O HIS 431 80.168 -17.476 -10.354 1.00 0.00 O ATOM 89 N GLY 432 80.697 -15.307 -10.604 1.00 0.00 N ATOM 90 CA GLY 432 81.081 -15.486 -11.993 1.00 0.00 C ATOM 91 C GLY 432 79.979 -15.926 -12.942 1.00 0.00 C ATOM 92 O GLY 432 80.264 -16.444 -14.022 1.00 0.00 O ATOM 93 N ILE 433 78.720 -15.730 -12.558 1.00 0.00 N ATOM 94 CA ILE 433 77.605 -16.111 -13.419 1.00 0.00 C ATOM 95 C ILE 433 77.354 -14.986 -14.421 1.00 0.00 C ATOM 96 O ILE 433 76.972 -13.879 -14.042 1.00 0.00 O ATOM 97 N ASP 434 77.573 -15.279 -15.699 1.00 0.00 N ATOM 98 CA ASP 434 77.400 -14.293 -16.762 1.00 0.00 C ATOM 99 C ASP 434 75.947 -14.047 -17.151 1.00 0.00 C ATOM 100 O ASP 434 75.119 -14.957 -17.116 1.00 0.00 O ATOM 101 N VAL 435 75.649 -12.809 -17.535 1.00 0.00 N ATOM 102 CA VAL 435 74.300 -12.431 -17.942 1.00 0.00 C ATOM 103 C VAL 435 73.788 -13.320 -19.070 1.00 0.00 C ATOM 104 O VAL 435 72.627 -13.723 -19.072 1.00 0.00 O ATOM 105 N THR 436 74.659 -13.617 -20.029 1.00 0.00 N ATOM 106 CA THR 436 74.285 -14.439 -21.176 1.00 0.00 C ATOM 107 C THR 436 73.808 -15.837 -20.801 1.00 0.00 C ATOM 108 O THR 436 72.935 -16.399 -21.458 1.00 0.00 O ATOM 109 N ASP 437 74.390 -16.396 -19.746 1.00 0.00 N ATOM 110 CA ASP 437 74.040 -17.737 -19.292 1.00 0.00 C ATOM 111 C ASP 437 72.621 -17.842 -18.732 1.00 0.00 C ATOM 112 O ASP 437 72.031 -18.921 -18.726 1.00 0.00 O ATOM 113 N LEU 438 72.073 -16.724 -18.269 1.00 0.00 N ATOM 114 CA LEU 438 70.737 -16.725 -17.677 1.00 0.00 C ATOM 115 C LEU 438 69.600 -16.437 -18.660 1.00 0.00 C ATOM 116 O LEU 438 68.429 -16.633 -18.337 1.00 0.00 O ATOM 117 N PHE 439 69.944 -15.985 -19.860 1.00 0.00 N ATOM 118 CA PHE 439 68.947 -15.640 -20.869 1.00 0.00 C ATOM 119 C PHE 439 67.909 -16.711 -21.196 1.00 0.00 C ATOM 120 O PHE 439 66.754 -16.387 -21.464 1.00 0.00 O ATOM 121 N ALA 440 68.309 -17.979 -21.175 1.00 0.00 N ATOM 122 CA ALA 440 67.387 -19.065 -21.507 1.00 0.00 C ATOM 123 C ALA 440 66.817 -19.789 -20.291 1.00 0.00 C ATOM 124 O ALA 440 66.156 -20.819 -20.429 1.00 0.00 O ATOM 125 N THR 441 67.063 -19.245 -19.106 1.00 0.00 N ATOM 126 CA THR 441 66.586 -19.860 -17.873 1.00 0.00 C ATOM 127 C THR 441 65.155 -19.480 -17.500 1.00 0.00 C ATOM 128 O THR 441 64.598 -18.509 -18.016 1.00 0.00 O ATOM 129 N GLN 442 64.539 -20.254 -16.591 1.00 0.00 N ATOM 130 CA GLN 442 63.168 -19.998 -16.137 1.00 0.00 C ATOM 131 C GLN 442 63.153 -18.755 -15.256 1.00 0.00 C ATOM 132 O GLN 442 64.190 -18.341 -14.745 1.00 0.00 O ATOM 133 N PRO 443 61.980 -18.157 -15.083 1.00 0.00 N ATOM 134 CA PRO 443 61.864 -16.989 -14.221 1.00 0.00 C ATOM 135 C PRO 443 61.510 -17.523 -12.841 1.00 0.00 C ATOM 136 O PRO 443 61.136 -18.686 -12.698 1.00 0.00 O ATOM 137 N GLY 444 58.155 -19.109 -12.619 1.00 0.00 N ATOM 138 CA GLY 444 58.025 -20.447 -13.184 1.00 0.00 C ATOM 139 C GLY 444 58.516 -21.580 -12.281 1.00 0.00 C ATOM 140 O GLY 444 58.179 -22.742 -12.506 1.00 0.00 O ATOM 141 N LEU 445 59.300 -21.250 -11.261 1.00 0.00 N ATOM 142 CA LEU 445 59.811 -22.275 -10.354 1.00 0.00 C ATOM 143 C LEU 445 59.245 -22.137 -8.945 1.00 0.00 C ATOM 144 O LEU 445 59.424 -23.028 -8.114 1.00 0.00 O ATOM 145 N THR 446 58.553 -21.030 -8.687 1.00 0.00 N ATOM 146 CA THR 446 58.003 -20.743 -7.364 1.00 0.00 C ATOM 147 C THR 446 57.154 -21.840 -6.738 1.00 0.00 C ATOM 148 O THR 446 57.311 -22.148 -5.560 1.00 0.00 O ATOM 149 N SER 447 56.250 -22.429 -7.509 1.00 0.00 N ATOM 150 CA SER 447 55.400 -23.472 -6.953 1.00 0.00 C ATOM 151 C SER 447 56.190 -24.682 -6.464 1.00 0.00 C ATOM 152 O SER 447 56.032 -25.106 -5.318 1.00 0.00 O ATOM 153 N ALA 448 57.047 -25.230 -7.319 1.00 0.00 N ATOM 154 CA ALA 448 57.842 -26.390 -6.931 1.00 0.00 C ATOM 155 C ALA 448 58.794 -26.031 -5.792 1.00 0.00 C ATOM 156 O ALA 448 59.060 -26.851 -4.913 1.00 0.00 O ATOM 157 N VAL 449 59.308 -24.806 -5.819 1.00 0.00 N ATOM 158 CA VAL 449 60.219 -24.330 -4.781 1.00 0.00 C ATOM 159 C VAL 449 59.494 -24.351 -3.437 1.00 0.00 C ATOM 160 O VAL 449 60.023 -24.847 -2.445 1.00 0.00 O ATOM 161 N ILE 450 58.272 -23.832 -3.408 1.00 0.00 N ATOM 162 CA ILE 450 57.506 -23.838 -2.169 1.00 0.00 C ATOM 163 C ILE 450 57.166 -25.265 -1.739 1.00 0.00 C ATOM 164 O ILE 450 57.183 -25.571 -0.541 1.00 0.00 O ATOM 165 N ASP 451 56.862 -26.139 -2.699 1.00 0.00 N ATOM 166 CA ASP 451 56.542 -27.531 -2.368 1.00 0.00 C ATOM 167 C ASP 451 57.742 -28.207 -1.725 1.00 0.00 C ATOM 168 O ASP 451 57.595 -29.071 -0.862 1.00 0.00 O ATOM 169 N ALA 452 58.934 -27.814 -2.161 1.00 0.00 N ATOM 170 CA ALA 452 60.166 -28.398 -1.644 1.00 0.00 C ATOM 171 C ALA 452 60.514 -27.954 -0.226 1.00 0.00 C ATOM 172 O ALA 452 60.893 -28.776 0.612 1.00 0.00 O ATOM 173 N LEU 453 60.382 -26.658 0.051 1.00 0.00 N ATOM 174 CA LEU 453 60.746 -26.132 1.367 1.00 0.00 C ATOM 175 C LEU 453 59.671 -26.128 2.451 1.00 0.00 C ATOM 176 O LEU 453 59.998 -26.113 3.636 1.00 0.00 O ATOM 177 N PRO 454 58.403 -26.142 2.059 1.00 0.00 N ATOM 178 CA PRO 454 57.316 -26.090 3.036 1.00 0.00 C ATOM 179 C PRO 454 57.477 -26.996 4.254 1.00 0.00 C ATOM 180 O PRO 454 57.749 -28.187 4.124 1.00 0.00 O ATOM 181 N ARG 455 57.294 -26.406 5.434 1.00 0.00 N ATOM 182 CA ARG 455 57.368 -27.138 6.684 1.00 0.00 C ATOM 183 C ARG 455 58.730 -27.547 7.205 1.00 0.00 C ATOM 184 O ARG 455 58.836 -28.056 8.317 1.00 0.00 O ATOM 185 N ASN 456 59.775 -27.325 6.418 1.00 0.00 N ATOM 186 CA ASN 456 61.113 -27.709 6.832 1.00 0.00 C ATOM 187 C ASN 456 61.797 -26.633 7.651 1.00 0.00 C ATOM 188 O ASN 456 61.311 -25.508 7.756 1.00 0.00 O ATOM 189 N MET 457 62.923 -27.000 8.255 1.00 0.00 N ATOM 190 CA MET 457 63.718 -26.035 8.995 1.00 0.00 C ATOM 191 C MET 457 64.755 -25.604 7.972 1.00 0.00 C ATOM 192 O MET 457 65.568 -26.415 7.534 1.00 0.00 O ATOM 193 N VAL 458 64.703 -24.343 7.563 1.00 0.00 N ATOM 194 CA VAL 458 65.663 -23.823 6.604 1.00 0.00 C ATOM 195 C VAL 458 66.927 -23.423 7.349 1.00 0.00 C ATOM 196 O VAL 458 66.862 -22.708 8.348 1.00 0.00 O ATOM 197 N ILE 459 68.072 -23.902 6.875 1.00 0.00 N ATOM 198 CA ILE 459 69.347 -23.568 7.494 1.00 0.00 C ATOM 199 C ILE 459 70.087 -22.739 6.463 1.00 0.00 C ATOM 200 O ILE 459 70.429 -23.236 5.395 1.00 0.00 O ATOM 201 N THR 460 70.317 -21.472 6.795 1.00 0.00 N ATOM 202 CA THR 460 70.964 -20.526 5.894 1.00 0.00 C ATOM 203 C THR 460 72.033 -19.699 6.615 1.00 0.00 C ATOM 204 O THR 460 71.821 -19.244 7.741 1.00 0.00 O ATOM 205 N CYS 461 73.174 -19.498 5.964 1.00 0.00 N ATOM 206 CA CYS 461 74.248 -18.708 6.561 1.00 0.00 C ATOM 207 C CYS 461 73.930 -17.235 6.301 1.00 0.00 C ATOM 208 O CYS 461 74.070 -16.748 5.177 1.00 0.00 O ATOM 209 N GLN 462 73.513 -16.539 7.357 1.00 0.00 N ATOM 210 CA GLN 462 73.088 -15.137 7.298 1.00 0.00 C ATOM 211 C GLN 462 71.694 -15.169 6.681 1.00 0.00 C ATOM 212 O GLN 462 71.411 -14.503 5.682 1.00 0.00 O ATOM 213 N GLY 463 70.829 -15.962 7.309 1.00 0.00 N ATOM 214 CA GLY 463 69.460 -16.180 6.860 1.00 0.00 C ATOM 215 C GLY 463 68.685 -14.963 6.381 1.00 0.00 C ATOM 216 O GLY 463 67.991 -15.040 5.370 1.00 0.00 O ATOM 217 N SER 464 68.786 -13.851 7.100 1.00 0.00 N ATOM 218 CA SER 464 68.053 -12.644 6.728 1.00 0.00 C ATOM 219 C SER 464 68.316 -12.208 5.291 1.00 0.00 C ATOM 220 O SER 464 67.448 -11.621 4.646 1.00 0.00 O ATOM 221 N ASP 465 69.513 -12.492 4.790 1.00 0.00 N ATOM 222 CA ASP 465 69.853 -12.116 3.425 1.00 0.00 C ATOM 223 C ASP 465 68.984 -12.867 2.418 1.00 0.00 C ATOM 224 O ASP 465 68.243 -12.263 1.646 1.00 0.00 O ATOM 225 N ASP 466 69.079 -14.191 2.442 1.00 0.00 N ATOM 226 CA ASP 466 68.333 -15.041 1.518 1.00 0.00 C ATOM 227 C ASP 466 66.827 -14.988 1.725 1.00 0.00 C ATOM 228 O ASP 466 66.069 -14.965 0.757 1.00 0.00 O ATOM 229 N ILE 467 66.390 -14.978 2.980 1.00 0.00 N ATOM 230 CA ILE 467 64.961 -14.917 3.260 1.00 0.00 C ATOM 231 C ILE 467 64.399 -13.604 2.722 1.00 0.00 C ATOM 232 O ILE 467 63.281 -13.562 2.204 1.00 0.00 O ATOM 233 N ARG 468 65.183 -12.536 2.846 1.00 0.00 N ATOM 234 CA ARG 468 64.753 -11.242 2.356 1.00 0.00 C ATOM 235 C ARG 468 64.503 -11.304 0.863 1.00 0.00 C ATOM 236 O ARG 468 63.487 -10.816 0.372 1.00 0.00 O ATOM 237 N LYS 469 65.435 -11.909 0.136 1.00 0.00 N ATOM 238 CA LYS 469 65.300 -12.048 -1.308 1.00 0.00 C ATOM 239 C LYS 469 64.141 -12.973 -1.667 1.00 0.00 C ATOM 240 O LYS 469 63.389 -12.701 -2.603 1.00 0.00 O ATOM 241 N LEU 470 63.995 -14.070 -0.928 1.00 0.00 N ATOM 242 CA LEU 470 62.907 -15.005 -1.194 1.00 0.00 C ATOM 243 C LEU 470 61.541 -14.350 -1.008 1.00 0.00 C ATOM 244 O LEU 470 60.679 -14.462 -1.878 1.00 0.00 O ATOM 245 N LEU 471 60.925 -11.776 -3.828 1.00 0.00 N ATOM 246 CA LEU 471 60.542 -12.422 -5.080 1.00 0.00 C ATOM 247 C LEU 471 59.145 -13.031 -4.987 1.00 0.00 C ATOM 248 O LEU 471 58.379 -12.980 -5.950 1.00 0.00 O ATOM 249 N GLU 472 58.801 -13.598 -3.834 1.00 0.00 N ATOM 250 CA GLU 472 57.468 -14.175 -3.671 1.00 0.00 C ATOM 251 C GLU 472 56.414 -13.076 -3.747 1.00 0.00 C ATOM 252 O GLU 472 55.346 -13.272 -4.329 1.00 0.00 O ATOM 253 N SER 473 56.714 -11.924 -3.157 1.00 0.00 N ATOM 254 CA SER 473 55.771 -10.808 -3.145 1.00 0.00 C ATOM 255 C SER 473 55.514 -10.230 -4.536 1.00 0.00 C ATOM 256 O SER 473 54.407 -9.782 -4.828 1.00 0.00 O ATOM 257 N GLN 474 56.527 -10.249 -5.394 1.00 0.00 N ATOM 258 CA GLN 474 56.376 -9.716 -6.746 1.00 0.00 C ATOM 259 C GLN 474 55.403 -10.536 -7.591 1.00 0.00 C ATOM 260 O GLN 474 54.925 -10.071 -8.627 1.00 0.00 O ATOM 261 N GLY 475 55.109 -11.754 -7.149 1.00 0.00 N ATOM 262 CA GLY 475 54.202 -12.630 -7.884 1.00 0.00 C ATOM 263 C GLY 475 52.741 -12.211 -7.744 1.00 0.00 C ATOM 264 O GLY 475 51.889 -12.636 -8.530 1.00 0.00 O ATOM 265 N ARG 476 52.457 -11.384 -6.743 1.00 0.00 N ATOM 266 CA ARG 476 51.104 -10.908 -6.488 1.00 0.00 C ATOM 267 C ARG 476 50.134 -12.073 -6.308 1.00 0.00 C ATOM 268 O ARG 476 49.044 -12.076 -6.882 1.00 0.00 O ATOM 269 N LYS 477 50.531 -13.060 -5.509 1.00 0.00 N ATOM 270 CA LYS 477 49.695 -14.229 -5.257 1.00 0.00 C ATOM 271 C LYS 477 49.350 -14.361 -3.777 1.00 0.00 C ATOM 272 O LYS 477 48.871 -15.403 -3.336 1.00 0.00 O ATOM 273 N ASP 478 49.597 -13.298 -3.017 1.00 0.00 N ATOM 274 CA ASP 478 49.316 -13.283 -1.584 1.00 0.00 C ATOM 275 C ASP 478 50.064 -14.374 -0.831 1.00 0.00 C ATOM 276 O ASP 478 49.552 -14.937 0.136 1.00 0.00 O ATOM 277 N ILE 479 51.279 -14.672 -1.276 1.00 0.00 N ATOM 278 CA ILE 479 52.087 -15.694 -0.619 1.00 0.00 C ATOM 279 C ILE 479 52.567 -15.149 0.724 1.00 0.00 C ATOM 280 O ILE 479 53.128 -14.057 0.798 1.00 0.00 O ATOM 281 N LEU 481 55.634 -20.536 7.226 1.00 0.00 N ATOM 282 CA LEU 481 55.427 -21.927 6.832 1.00 0.00 C ATOM 283 C LEU 481 56.716 -22.752 6.882 1.00 0.00 C ATOM 284 O LEU 481 56.720 -23.947 6.572 1.00 0.00 O ATOM 285 N ILE 482 57.795 -22.099 7.311 1.00 0.00 N ATOM 286 CA ILE 482 59.111 -22.720 7.469 1.00 0.00 C ATOM 287 C ILE 482 59.769 -22.209 8.739 1.00 0.00 C ATOM 288 O ILE 482 59.543 -21.067 9.141 1.00 0.00 O ATOM 289 N ASP 483 60.581 -23.049 9.375 1.00 0.00 N ATOM 290 CA ASP 483 61.322 -22.606 10.548 1.00 0.00 C ATOM 291 C ASP 483 62.609 -22.084 9.919 1.00 0.00 C ATOM 292 O ASP 483 63.117 -22.683 8.970 1.00 0.00 O ATOM 293 N ILE 484 63.126 -20.966 10.410 1.00 0.00 N ATOM 294 CA ILE 484 64.352 -20.411 9.842 1.00 0.00 C ATOM 295 C ILE 484 65.487 -20.356 10.854 1.00 0.00 C ATOM 296 O ILE 484 65.370 -19.727 11.905 1.00 0.00 O ATOM 297 N ALA 485 66.584 -21.028 10.525 1.00 0.00 N ATOM 298 CA ALA 485 67.757 -21.054 11.389 1.00 0.00 C ATOM 299 C ALA 485 68.919 -20.349 10.706 1.00 0.00 C ATOM 300 O ALA 485 69.297 -20.702 9.588 1.00 0.00 O ATOM 301 N LEU 486 69.479 -19.346 11.376 1.00 0.00 N ATOM 302 CA LEU 486 70.610 -18.608 10.825 1.00 0.00 C ATOM 303 C LEU 486 71.871 -19.297 11.333 1.00 0.00 C ATOM 304 O LEU 486 72.244 -19.131 12.499 1.00 0.00 O ATOM 305 N SER 487 72.526 -20.067 10.467 1.00 0.00 N ATOM 306 CA SER 487 73.727 -20.791 10.875 1.00 0.00 C ATOM 307 C SER 487 74.904 -19.882 11.213 1.00 0.00 C ATOM 308 O SER 487 75.858 -20.317 11.862 1.00 0.00 O ATOM 309 N LYS 488 74.848 -18.627 10.773 1.00 0.00 N ATOM 310 CA LYS 488 75.917 -17.681 11.070 1.00 0.00 C ATOM 311 C LYS 488 75.755 -17.216 12.513 1.00 0.00 C ATOM 312 O LYS 488 76.737 -17.005 13.223 1.00 0.00 O ATOM 313 N THR 489 74.508 -17.064 12.948 1.00 0.00 N ATOM 314 CA THR 489 74.235 -16.655 14.319 1.00 0.00 C ATOM 315 C THR 489 74.634 -17.822 15.219 1.00 0.00 C ATOM 316 O THR 489 75.199 -17.631 16.294 1.00 0.00 O ATOM 317 N ASP 490 74.338 -19.037 14.768 1.00 0.00 N ATOM 318 CA ASP 490 74.685 -20.232 15.529 1.00 0.00 C ATOM 319 C ASP 490 76.198 -20.329 15.684 1.00 0.00 C ATOM 320 O ASP 490 76.705 -20.619 16.771 1.00 0.00 O ATOM 321 N SER 491 76.917 -20.095 14.592 1.00 0.00 N ATOM 322 CA SER 491 78.376 -20.157 14.610 1.00 0.00 C ATOM 323 C SER 491 78.963 -19.058 15.496 1.00 0.00 C ATOM 324 O SER 491 79.901 -19.296 16.261 1.00 0.00 O ATOM 325 N ARG 492 78.414 -17.852 15.397 1.00 0.00 N ATOM 326 CA ARG 492 78.907 -16.749 16.211 1.00 0.00 C ATOM 327 C ARG 492 78.706 -17.035 17.691 1.00 0.00 C ATOM 328 O ARG 492 79.516 -16.636 18.518 1.00 0.00 O ATOM 329 N LYS 493 77.631 -17.742 18.022 1.00 0.00 N ATOM 330 CA LYS 493 77.357 -18.076 19.416 1.00 0.00 C ATOM 331 C LYS 493 78.337 -19.133 19.926 1.00 0.00 C ATOM 332 O LYS 493 78.779 -19.084 21.078 1.00 0.00 O ATOM 333 N TYR 494 78.683 -20.081 19.063 1.00 0.00 N ATOM 334 CA TYR 494 79.598 -21.157 19.432 1.00 0.00 C ATOM 335 C TYR 494 81.055 -20.717 19.398 1.00 0.00 C ATOM 336 O TYR 494 81.883 -21.231 20.153 1.00 0.00 O ATOM 337 N GLN 501 82.849 -16.819 8.743 1.00 0.00 N ATOM 338 CA GLN 501 82.385 -16.878 7.364 1.00 0.00 C ATOM 339 C GLN 501 82.316 -18.367 7.043 1.00 0.00 C ATOM 340 O GLN 501 82.911 -19.183 7.747 1.00 0.00 O ATOM 341 N TYR 502 81.596 -18.725 5.987 1.00 0.00 N ATOM 342 CA TYR 502 81.492 -20.122 5.600 1.00 0.00 C ATOM 343 C TYR 502 82.885 -20.704 5.360 1.00 0.00 C ATOM 344 O TYR 502 83.159 -21.840 5.743 1.00 0.00 O ATOM 345 N LYS 503 83.770 -19.928 4.734 1.00 0.00 N ATOM 346 CA LYS 503 85.125 -20.414 4.477 1.00 0.00 C ATOM 347 C LYS 503 85.892 -20.668 5.771 1.00 0.00 C ATOM 348 O LYS 503 86.633 -21.648 5.876 1.00 0.00 O ATOM 349 N ASP 504 85.731 -19.777 6.746 1.00 0.00 N ATOM 350 CA ASP 504 86.416 -19.935 8.026 1.00 0.00 C ATOM 351 C ASP 504 85.913 -21.197 8.723 1.00 0.00 C ATOM 352 O ASP 504 86.684 -21.911 9.368 1.00 0.00 O ATOM 353 N LEU 505 84.617 -21.467 8.599 1.00 0.00 N ATOM 354 CA LEU 505 84.033 -22.656 9.214 1.00 0.00 C ATOM 355 C LEU 505 84.497 -23.928 8.503 1.00 0.00 C ATOM 356 O LEU 505 84.590 -24.995 9.116 1.00 0.00 O ATOM 357 N CYS 506 84.795 -23.818 7.212 1.00 0.00 N ATOM 358 CA CYS 506 85.275 -24.969 6.452 1.00 0.00 C ATOM 359 C CYS 506 86.632 -25.400 6.979 1.00 0.00 C ATOM 360 O CYS 506 86.918 -26.587 7.093 1.00 0.00 O ATOM 361 N HIS 507 87.473 -24.420 7.287 1.00 0.00 N ATOM 362 CA HIS 507 88.800 -24.705 7.807 1.00 0.00 C ATOM 363 C HIS 507 88.675 -25.276 9.212 1.00 0.00 C ATOM 364 O HIS 507 89.363 -26.229 9.573 1.00 0.00 O ATOM 365 N MET 508 87.782 -24.686 9.997 1.00 0.00 N ATOM 366 CA MET 508 87.555 -25.111 11.370 1.00 0.00 C ATOM 367 C MET 508 87.076 -26.563 11.443 1.00 0.00 C ATOM 368 O MET 508 87.498 -27.324 12.313 1.00 0.00 O ATOM 369 N HIS 509 86.211 -26.962 10.516 1.00 0.00 N ATOM 370 CA HIS 509 85.690 -28.324 10.518 1.00 0.00 C ATOM 371 C HIS 509 86.270 -29.235 9.441 1.00 0.00 C ATOM 372 O HIS 509 85.737 -30.313 9.174 1.00 0.00 O ATOM 373 N THR 510 87.364 -28.799 8.829 1.00 0.00 N ATOM 374 CA THR 510 88.033 -29.582 7.798 1.00 0.00 C ATOM 375 C THR 510 87.121 -30.031 6.658 1.00 0.00 C ATOM 376 O THR 510 87.149 -31.192 6.243 1.00 0.00 O ATOM 377 N GLY 520 86.316 -29.099 6.154 1.00 0.00 N ATOM 378 CA GLY 520 85.410 -29.368 5.041 1.00 0.00 C ATOM 379 C GLY 520 86.067 -28.806 3.778 1.00 0.00 C ATOM 380 O GLY 520 86.611 -27.701 3.793 1.00 0.00 O ATOM 381 N GLY 521 86.019 -29.564 2.688 1.00 0.00 N ATOM 382 CA GLY 521 86.641 -29.139 1.436 1.00 0.00 C ATOM 383 C GLY 521 85.931 -28.011 0.691 1.00 0.00 C ATOM 384 O GLY 521 84.785 -28.152 0.273 1.00 0.00 O ATOM 385 N LYS 522 86.631 -26.892 0.520 1.00 0.00 N ATOM 386 CA LYS 522 86.087 -25.740 -0.194 1.00 0.00 C ATOM 387 C LYS 522 87.090 -25.321 -1.270 1.00 0.00 C ATOM 388 O LYS 522 87.123 -24.163 -1.690 1.00 0.00 O ATOM 389 N GLU 523 87.900 -26.281 -1.712 1.00 0.00 N ATOM 390 CA GLU 523 88.921 -26.034 -2.728 1.00 0.00 C ATOM 391 C GLU 523 88.324 -25.717 -4.096 1.00 0.00 C ATOM 392 O GLU 523 88.964 -25.067 -4.923 1.00 0.00 O ATOM 393 N GLU 524 87.102 -26.180 -4.333 1.00 0.00 N ATOM 394 CA GLU 524 86.432 -25.935 -5.604 1.00 0.00 C ATOM 395 C GLU 524 85.573 -24.677 -5.513 1.00 0.00 C ATOM 396 O GLU 524 84.780 -24.389 -6.412 1.00 0.00 O ATOM 397 N ILE 525 85.749 -23.919 -4.434 1.00 0.00 N ATOM 398 CA ILE 525 84.956 -22.716 -4.227 1.00 0.00 C ATOM 399 C ILE 525 85.668 -21.390 -4.498 1.00 0.00 C ATOM 400 O ILE 525 85.510 -20.437 -3.734 1.00 0.00 O ATOM 401 N THR 526 86.450 -21.319 -5.571 1.00 0.00 N ATOM 402 CA THR 526 87.126 -20.066 -5.900 1.00 0.00 C ATOM 403 C THR 526 86.006 -19.066 -6.161 1.00 0.00 C ATOM 404 O THR 526 86.045 -17.923 -5.699 1.00 0.00 O ATOM 405 N PRO 527 85.007 -19.521 -6.911 1.00 0.00 N ATOM 406 CA PRO 527 83.831 -18.721 -7.216 1.00 0.00 C ATOM 407 C PRO 527 82.690 -19.393 -6.463 1.00 0.00 C ATOM 408 O PRO 527 82.592 -20.619 -6.439 1.00 0.00 O ATOM 409 N HIS 528 81.836 -18.591 -5.841 1.00 0.00 N ATOM 410 CA HIS 528 80.717 -19.132 -5.081 1.00 0.00 C ATOM 411 C HIS 528 79.603 -19.616 -6.001 1.00 0.00 C ATOM 412 O HIS 528 79.418 -19.089 -7.092 1.00 0.00 O ATOM 413 N CYS 529 78.870 -20.627 -5.546 1.00 0.00 N ATOM 414 CA CYS 529 77.753 -21.169 -6.304 1.00 0.00 C ATOM 415 C CYS 529 76.681 -21.513 -5.287 1.00 0.00 C ATOM 416 O CYS 529 77.014 -21.942 -4.185 1.00 0.00 O ATOM 417 N ALA 530 75.408 -21.333 -5.630 1.00 0.00 N ATOM 418 CA ALA 530 74.339 -21.619 -4.673 1.00 0.00 C ATOM 419 C ALA 530 74.298 -23.074 -4.203 1.00 0.00 C ATOM 420 O ALA 530 74.249 -23.333 -2.998 1.00 0.00 O ATOM 421 N LEU 531 74.315 -24.025 -5.132 1.00 0.00 N ATOM 422 CA LEU 531 74.285 -25.435 -4.735 1.00 0.00 C ATOM 423 C LEU 531 75.614 -25.797 -4.084 1.00 0.00 C ATOM 424 O LEU 531 75.652 -26.508 -3.084 1.00 0.00 O ATOM 425 N MET 532 76.705 -25.301 -4.659 1.00 0.00 N ATOM 426 CA MET 532 78.032 -25.560 -4.118 1.00 0.00 C ATOM 427 C MET 532 78.088 -25.082 -2.663 1.00 0.00 C ATOM 428 O MET 532 78.531 -25.813 -1.773 1.00 0.00 O ATOM 429 N ASP 533 77.626 -23.858 -2.429 1.00 0.00 N ATOM 430 CA ASP 533 77.625 -23.273 -1.092 1.00 0.00 C ATOM 431 C ASP 533 76.682 -23.986 -0.132 1.00 0.00 C ATOM 432 O ASP 533 76.983 -24.128 1.051 1.00 0.00 O ATOM 433 N CYS 534 75.531 -24.421 -0.636 1.00 0.00 N ATOM 434 CA CYS 534 74.556 -25.114 0.202 1.00 0.00 C ATOM 435 C CYS 534 75.105 -26.464 0.652 1.00 0.00 C ATOM 436 O CYS 534 74.915 -26.866 1.800 1.00 0.00 O ATOM 437 N ILE 535 75.778 -27.162 -0.259 1.00 0.00 N ATOM 438 CA ILE 535 76.363 -28.472 0.045 1.00 0.00 C ATOM 439 C ILE 535 77.444 -28.325 1.106 1.00 0.00 C ATOM 440 O ILE 535 77.512 -29.110 2.052 1.00 0.00 O ATOM 441 N MET 536 78.301 -27.324 0.934 1.00 0.00 N ATOM 442 CA MET 536 79.372 -27.083 1.891 1.00 0.00 C ATOM 443 C MET 536 78.780 -26.721 3.253 1.00 0.00 C ATOM 444 O MET 536 79.206 -27.250 4.280 1.00 0.00 O ATOM 445 N PHE 537 77.786 -25.836 3.263 1.00 0.00 N ATOM 446 CA PHE 537 77.153 -25.445 4.517 1.00 0.00 C ATOM 447 C PHE 537 76.500 -26.645 5.194 1.00 0.00 C ATOM 448 O PHE 537 76.508 -26.748 6.421 1.00 0.00 O ATOM 449 N ASP 538 75.930 -27.550 4.404 1.00 0.00 N ATOM 450 CA ASP 538 75.292 -28.731 4.978 1.00 0.00 C ATOM 451 C ASP 538 76.330 -29.526 5.762 1.00 0.00 C ATOM 452 O ASP 538 76.086 -29.915 6.899 1.00 0.00 O ATOM 453 N ALA 539 77.487 -29.755 5.150 1.00 0.00 N ATOM 454 CA ALA 539 78.564 -30.499 5.804 1.00 0.00 C ATOM 455 C ALA 539 79.029 -29.768 7.056 1.00 0.00 C ATOM 456 O ALA 539 79.232 -30.380 8.107 1.00 0.00 O ATOM 457 N ALA 540 79.207 -28.457 6.936 1.00 0.00 N ATOM 458 CA ALA 540 79.642 -27.639 8.060 1.00 0.00 C ATOM 459 C ALA 540 78.637 -27.675 9.204 1.00 0.00 C ATOM 460 O ALA 540 79.004 -27.903 10.356 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 452 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 71.03 60.6 132 12.9 1026 ARMSMC SECONDARY STRUCTURE . . 77.24 50.0 56 10.6 526 ARMSMC SURFACE . . . . . . . . 77.18 58.6 70 14.3 490 ARMSMC BURIED . . . . . . . . 63.38 62.9 62 11.6 536 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 411 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 381 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 216 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 199 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 212 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 257 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 186 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 148 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 131 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 126 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 78 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 62 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 44 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 53 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 25 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 30 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 30 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 16 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 25 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 5 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 8.00 (Number of atoms: 113) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 8.00 113 21.9 515 CRMSCA CRN = ALL/NP . . . . . 0.0708 CRMSCA SECONDARY STRUCTURE . . 7.24 57 21.7 263 CRMSCA SURFACE . . . . . . . . 8.91 55 22.3 247 CRMSCA BURIED . . . . . . . . 7.01 58 21.6 268 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 8.00 452 17.8 2544 CRMSMC SECONDARY STRUCTURE . . 7.18 228 17.4 1309 CRMSMC SURFACE . . . . . . . . 8.85 220 18.1 1216 CRMSMC BURIED . . . . . . . . 7.10 232 17.5 1328 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 1970 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 1650 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 1038 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 948 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 1022 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 8.00 452 11.2 4030 CRMSALL SECONDARY STRUCTURE . . 7.18 228 10.9 2090 CRMSALL SURFACE . . . . . . . . 8.85 220 11.4 1936 CRMSALL BURIED . . . . . . . . 7.10 232 11.1 2094 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.638 1.000 0.500 113 21.9 515 ERRCA SECONDARY STRUCTURE . . 6.000 1.000 0.500 57 21.7 263 ERRCA SURFACE . . . . . . . . 7.497 1.000 0.500 55 22.3 247 ERRCA BURIED . . . . . . . . 5.823 1.000 0.500 58 21.6 268 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.610 1.000 0.500 452 17.8 2544 ERRMC SECONDARY STRUCTURE . . 5.908 1.000 0.500 228 17.4 1309 ERRMC SURFACE . . . . . . . . 7.352 1.000 0.500 220 18.1 1216 ERRMC BURIED . . . . . . . . 5.907 1.000 0.500 232 17.5 1328 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 1970 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 1650 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 1038 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 948 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 1022 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 6.610 1.000 0.500 452 11.2 4030 ERRALL SECONDARY STRUCTURE . . 5.908 1.000 0.500 228 10.9 2090 ERRALL SURFACE . . . . . . . . 7.352 1.000 0.500 220 11.4 1936 ERRALL BURIED . . . . . . . . 5.907 1.000 0.500 232 11.1 2094 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 0 2 15 48 98 113 515 DISTCA CA (P) 0.00 0.39 2.91 9.32 19.03 515 DISTCA CA (RMS) 0.00 1.88 2.43 3.67 5.44 DISTCA ALL (N) 1 11 63 197 390 452 4030 DISTALL ALL (P) 0.02 0.27 1.56 4.89 9.68 4030 DISTALL ALL (RMS) 0.87 1.59 2.38 3.66 5.37 DISTALL END of the results output