####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 102 ( 502), selected 99 , name T0527TS435_1-D1 # Molecule2: number of CA atoms 99 ( 823), selected 99 , name T0527-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0527TS435_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 99 20 - 121 2.61 2.61 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 67 52 - 121 1.97 2.73 LCS_AVERAGE: 53.33 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 26 82 - 107 0.93 2.85 LCS_AVERAGE: 17.17 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 99 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 20 A 20 9 25 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT G 21 G 21 9 25 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT L 22 L 22 9 25 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT W 23 W 23 9 25 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT D 24 D 24 9 25 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT W 25 W 25 9 25 99 9 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT N 26 N 26 9 25 99 7 42 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT P 27 P 27 9 25 99 4 20 56 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT K 28 K 28 9 25 99 11 45 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT T 29 T 29 6 25 99 4 4 6 11 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT G 30 G 30 4 25 99 3 3 24 51 82 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT A 31 A 31 4 25 99 3 22 38 69 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT M 32 M 32 7 25 99 3 7 12 18 39 62 82 88 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT Y 33 Y 33 7 25 99 4 24 44 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT L 34 L 34 9 25 99 8 45 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT S 35 S 35 9 25 99 23 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT P 36 P 36 9 25 99 16 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT H 37 H 37 9 25 99 14 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT F 38 F 38 9 25 99 4 22 56 70 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT K 39 K 39 9 25 99 4 12 56 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT K 40 K 40 9 25 99 4 35 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT I 41 I 41 9 25 99 4 35 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT M 42 M 42 9 25 99 13 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT G 43 G 43 9 25 99 4 24 52 69 82 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT Y 44 Y 44 9 25 99 4 11 21 46 69 84 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT E 45 E 45 9 18 99 4 9 15 27 41 58 71 88 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT D 46 D 46 9 18 99 3 9 16 27 41 58 71 83 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT H 47 H 47 9 18 99 4 9 15 27 41 55 66 75 86 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT E 48 E 48 9 18 99 4 9 13 19 30 39 56 73 79 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT L 49 L 49 9 18 99 4 8 13 19 26 45 66 73 82 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT P 50 P 50 7 18 99 3 8 13 27 46 60 71 83 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT D 51 D 51 5 5 99 3 3 5 5 19 43 48 68 77 87 91 97 99 99 99 99 99 99 99 99 LCS_GDT E 52 E 52 5 67 99 3 3 5 14 29 43 48 68 82 90 94 98 99 99 99 99 99 99 99 99 LCS_GDT I 53 I 53 5 67 99 1 20 33 56 67 82 87 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT T 54 T 54 5 67 99 0 3 5 7 32 58 73 84 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT E 58 E 58 18 67 99 3 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT S 59 S 59 19 67 99 6 45 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT I 60 I 60 19 67 99 21 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT H 61 H 61 19 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT P 62 P 62 19 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT D 63 D 63 19 67 99 14 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT D 64 D 64 19 67 99 18 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT R 65 R 65 19 67 99 18 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT A 66 A 66 19 67 99 4 43 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT R 67 R 67 19 67 99 11 43 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT V 68 V 68 19 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT L 69 L 69 19 67 99 13 45 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT A 70 A 70 19 67 99 6 32 56 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT A 71 A 71 19 67 99 6 38 56 69 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT L 72 L 72 19 67 99 6 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT K 73 K 73 19 67 99 6 23 56 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT A 74 A 74 19 67 99 6 12 47 68 82 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT H 75 H 75 19 67 99 16 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT L 76 L 76 19 67 99 6 12 40 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT E 77 E 77 25 67 99 12 26 56 70 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT H 78 H 78 25 67 99 12 35 56 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT R 79 R 79 25 67 99 4 29 56 70 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT D 80 D 80 25 67 99 4 12 52 70 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT T 81 T 81 25 67 99 3 14 52 70 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT Y 82 Y 82 26 67 99 4 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT D 83 D 83 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT V 84 V 84 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT E 85 E 85 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT Y 86 Y 86 26 67 99 7 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT R 87 R 87 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT V 88 V 88 26 67 99 12 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT R 89 R 89 26 67 99 12 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT T 90 T 90 26 67 99 16 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT R 91 R 91 26 67 99 7 30 58 70 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT S 92 S 92 26 67 99 14 44 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT G 93 G 93 26 67 99 12 42 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT D 94 D 94 26 67 99 14 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT F 95 F 95 26 67 99 18 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT R 96 R 96 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT W 97 W 97 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT I 98 I 98 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT Q 99 Q 99 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT S 100 S 100 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT R 101 R 101 26 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT G 102 G 102 26 67 99 16 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT Q 103 Q 103 26 67 99 18 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT A 104 A 104 26 67 99 9 45 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT L 105 L 105 26 67 99 9 39 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT W 106 W 106 26 67 99 5 24 56 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT N 107 N 107 26 67 99 7 27 57 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT S 108 S 108 18 67 99 5 21 44 70 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT A 109 A 109 18 67 99 6 24 55 70 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT G 110 G 110 18 67 99 5 13 37 67 82 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT E 111 E 111 18 67 99 7 17 54 69 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT P 112 P 112 18 67 99 7 22 56 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT Y 113 Y 113 18 67 99 7 22 58 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT R 114 R 114 18 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT M 115 M 115 18 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT V 116 V 116 18 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT G 117 G 117 18 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT W 118 W 118 18 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT I 119 I 119 16 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT M 120 M 120 16 67 99 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_GDT D 121 D 121 12 67 99 16 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 LCS_AVERAGE LCS_A: 56.83 ( 17.17 53.33 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 24 46 60 71 83 87 88 89 90 93 97 98 99 99 99 99 99 99 99 99 GDT PERCENT_AT 24.24 46.46 60.61 71.72 83.84 87.88 88.89 89.90 90.91 93.94 97.98 98.99 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 GDT RMS_LOCAL 0.33 0.61 0.85 1.16 1.43 1.54 1.60 1.66 1.72 2.06 2.39 2.49 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 GDT RMS_ALL_AT 2.88 2.84 2.82 2.82 2.83 2.84 2.81 2.78 2.79 2.66 2.62 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 2.61 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA A 20 A 20 1.099 0 0.053 0.102 1.487 81.429 81.429 LGA G 21 G 21 0.966 0 0.096 0.096 0.993 90.476 90.476 LGA L 22 L 22 0.862 3 0.058 0.091 1.055 88.214 55.417 LGA W 23 W 23 0.726 9 0.063 0.068 0.861 90.476 32.313 LGA D 24 D 24 1.140 3 0.128 0.135 1.581 88.214 53.214 LGA W 25 W 25 0.930 9 0.105 0.106 1.480 88.214 31.020 LGA N 26 N 26 0.924 3 0.198 0.252 1.253 85.952 53.155 LGA P 27 P 27 1.613 2 0.070 0.069 2.332 81.548 55.850 LGA K 28 K 28 0.767 4 0.034 0.055 2.002 84.167 45.503 LGA T 29 T 29 2.525 2 0.361 0.375 4.112 57.976 40.272 LGA G 30 G 30 3.492 0 0.646 0.646 3.764 53.810 53.810 LGA A 31 A 31 2.875 0 0.072 0.102 4.421 53.690 50.381 LGA M 32 M 32 4.739 3 0.583 0.575 7.107 34.524 18.512 LGA Y 33 Y 33 2.274 7 0.049 0.065 2.655 69.048 28.413 LGA L 34 L 34 1.339 3 0.096 0.106 1.679 81.548 49.881 LGA S 35 S 35 0.370 1 0.019 0.031 0.897 95.238 80.159 LGA P 36 P 36 0.822 2 0.158 0.170 1.120 90.476 63.333 LGA H 37 H 37 0.812 5 0.083 0.097 1.593 85.952 41.667 LGA F 38 F 38 1.849 6 0.020 0.025 2.312 72.857 32.381 LGA K 39 K 39 1.768 4 0.060 0.061 1.890 72.857 40.476 LGA K 40 K 40 1.246 4 0.022 0.048 1.377 81.429 45.238 LGA I 41 I 41 1.156 3 0.141 0.146 1.619 79.286 49.821 LGA M 42 M 42 0.501 3 0.145 0.137 0.703 92.857 57.738 LGA G 43 G 43 2.298 0 0.121 0.121 3.444 61.190 61.190 LGA Y 44 Y 44 4.335 7 0.100 0.109 5.016 36.190 15.159 LGA E 45 E 45 6.735 4 0.036 0.054 8.011 14.286 6.878 LGA D 46 D 46 6.496 3 0.109 0.135 6.845 14.286 8.810 LGA H 47 H 47 7.665 5 0.104 0.102 8.524 6.786 3.190 LGA E 48 E 48 7.980 4 0.265 0.264 8.161 6.548 3.439 LGA L 49 L 49 6.981 3 0.647 0.644 9.544 7.738 6.012 LGA P 50 P 50 6.527 2 0.619 0.596 7.839 11.905 11.293 LGA D 51 D 51 9.643 3 0.254 0.254 11.325 2.024 1.012 LGA E 52 E 52 8.337 4 0.106 0.101 10.230 10.000 4.444 LGA I 53 I 53 4.302 3 0.605 0.577 5.423 34.405 20.476 LGA T 54 T 54 5.734 2 0.289 0.355 7.600 32.262 19.456 LGA E 58 E 58 1.615 4 0.184 0.176 2.335 72.976 41.481 LGA S 59 S 59 1.182 1 0.137 0.148 2.146 79.524 66.587 LGA I 60 I 60 1.124 3 0.103 0.103 1.315 83.690 52.024 LGA H 61 H 61 1.011 5 0.067 0.082 1.037 85.952 43.429 LGA P 62 P 62 1.048 2 0.027 0.041 1.093 85.952 60.748 LGA D 63 D 63 0.428 3 0.101 0.099 0.751 95.238 60.119 LGA D 64 D 64 0.723 3 0.117 0.116 0.791 90.476 56.548 LGA R 65 R 65 1.022 6 0.048 0.076 1.302 81.429 37.013 LGA A 66 A 66 1.959 0 0.034 0.036 2.192 70.833 69.619 LGA R 67 R 67 1.464 6 0.019 0.035 1.659 79.286 36.234 LGA V 68 V 68 1.012 2 0.021 0.041 1.040 85.952 60.748 LGA L 69 L 69 1.247 3 0.042 0.041 1.642 81.429 49.821 LGA A 70 A 70 2.108 0 0.028 0.042 2.578 66.786 64.857 LGA A 71 A 71 2.234 0 0.044 0.048 2.502 68.810 66.476 LGA L 72 L 72 1.535 3 0.056 0.073 1.942 79.286 48.750 LGA K 73 K 73 2.178 4 0.043 0.051 2.626 66.786 36.032 LGA A 74 A 74 2.920 0 0.081 0.078 3.458 57.262 55.810 LGA H 75 H 75 2.079 5 0.110 0.141 2.800 75.119 35.762 LGA L 76 L 76 1.721 3 0.176 0.189 2.265 72.976 45.595 LGA E 77 E 77 2.205 4 0.054 0.055 2.746 64.881 36.032 LGA H 78 H 78 1.965 5 0.076 0.072 2.576 66.905 34.048 LGA R 79 R 79 2.287 6 0.211 0.208 2.817 62.857 28.052 LGA D 80 D 80 2.424 3 0.050 0.050 2.424 66.786 41.488 LGA T 81 T 81 2.405 2 0.097 0.090 3.513 69.048 45.646 LGA Y 82 Y 82 1.246 7 0.216 0.269 2.989 90.595 34.960 LGA D 83 D 83 0.415 3 0.208 0.244 0.783 92.857 57.738 LGA V 84 V 84 0.421 2 0.024 0.030 0.491 100.000 71.429 LGA E 85 E 85 0.280 4 0.071 0.085 0.672 100.000 54.497 LGA Y 86 Y 86 0.699 7 0.057 0.218 2.352 90.595 35.595 LGA R 87 R 87 0.883 6 0.129 0.168 1.182 85.952 39.481 LGA V 88 V 88 1.304 2 0.050 0.052 1.543 81.429 56.939 LGA R 89 R 89 1.190 6 0.087 0.104 1.324 85.952 38.658 LGA T 90 T 90 0.380 2 0.094 0.110 1.083 90.595 64.694 LGA R 91 R 91 1.732 6 0.040 0.057 2.463 77.143 33.939 LGA S 92 S 92 0.689 1 0.268 0.258 0.875 90.476 75.397 LGA G 93 G 93 1.497 0 0.098 0.098 1.779 79.286 79.286 LGA D 94 D 94 1.287 3 0.103 0.117 1.410 83.690 52.024 LGA F 95 F 95 1.209 6 0.026 0.040 1.446 81.429 37.013 LGA R 96 R 96 1.062 6 0.076 0.119 1.062 83.690 38.658 LGA W 97 W 97 0.841 9 0.023 0.029 1.007 88.214 31.667 LGA I 98 I 98 0.367 3 0.034 0.051 0.587 97.619 61.310 LGA Q 99 Q 99 0.212 4 0.042 0.047 0.668 97.619 54.497 LGA S 100 S 100 0.280 1 0.061 0.060 0.434 100.000 83.333 LGA R 101 R 101 0.435 6 0.052 0.058 1.038 92.976 42.035 LGA G 102 G 102 1.508 0 0.070 0.070 1.508 81.548 81.548 LGA Q 103 Q 103 1.024 4 0.137 0.152 1.731 79.286 45.291 LGA A 104 A 104 1.228 0 0.058 0.086 1.708 85.952 83.333 LGA L 105 L 105 0.821 3 0.044 0.047 1.104 90.476 55.417 LGA W 106 W 106 1.849 9 0.050 0.056 2.881 70.833 24.320 LGA N 107 N 107 1.552 3 0.033 0.059 2.163 70.833 45.595 LGA S 108 S 108 2.638 1 0.125 0.126 2.984 59.048 48.889 LGA A 109 A 109 2.247 0 0.206 0.202 3.782 57.500 60.571 LGA G 110 G 110 3.114 0 0.110 0.110 3.375 53.571 53.571 LGA E 111 E 111 2.332 4 0.077 0.118 2.332 68.810 37.778 LGA P 112 P 112 1.946 2 0.080 0.080 2.219 68.810 48.571 LGA Y 113 Y 113 1.777 7 0.163 0.170 2.221 70.833 29.683 LGA R 114 R 114 1.455 6 0.053 0.069 1.611 83.690 37.056 LGA M 115 M 115 1.333 3 0.085 0.097 1.420 83.690 52.024 LGA V 116 V 116 1.198 2 0.076 0.073 1.578 79.286 55.714 LGA G 117 G 117 1.047 0 0.072 0.072 1.047 88.214 88.214 LGA W 118 W 118 0.872 9 0.107 0.169 1.372 90.476 31.667 LGA I 119 I 119 0.736 3 0.090 0.142 0.975 90.476 56.548 LGA M 120 M 120 0.905 3 0.032 0.050 0.958 90.476 56.548 LGA D 121 D 121 1.081 3 0.059 0.072 1.438 83.690 52.024 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 99 396 396 100.00 823 488 59.30 99 SUMMARY(RMSD_GDC): 2.606 2.592 2.679 72.583 46.184 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 102 99 4.0 89 1.66 77.020 75.392 5.054 LGA_LOCAL RMSD: 1.661 Number of atoms: 89 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 2.779 Number of assigned atoms: 99 Std_ASGN_ATOMS RMSD: 2.606 Standard rmsd on all 99 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.408207 * X + 0.748634 * Y + 0.522412 * Z + 14.079679 Y_new = 0.837007 * X + -0.078502 * Y + -0.541532 * Z + -38.649712 Z_new = -0.364399 * X + 0.658320 * Y + -0.658657 * Z + 11.252260 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.117038 0.372987 2.356450 [DEG: 64.0016 21.3706 135.0147 ] ZXZ: 0.767429 2.289829 -0.505548 [DEG: 43.9705 131.1975 -28.9658 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0527TS435_1-D1 REMARK 2: T0527-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0527TS435_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 102 99 4.0 89 1.66 75.392 2.61 REMARK ---------------------------------------------------------- MOLECULE T0527TS435_1-D1 USER MOD reduce.3.15.091106 removed 136 hydrogens (0 hets) REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK PFR REMARK TARGET T0527 REMARK MODEL 1 REMARK PARENT 3eeh ATOM 113 N ALA 20 47.115 28.009 9.228 1.00 0.00 N ATOM 115 CA ALA 20 46.495 26.723 9.366 1.00 0.00 C ATOM 116 CB ALA 20 46.899 26.015 10.670 1.00 0.00 C ATOM 117 C ALA 20 45.015 26.891 9.420 1.00 0.00 C ATOM 118 O ALA 20 44.506 27.862 9.975 1.00 0.00 O ATOM 119 N GLY 21 44.281 25.936 8.815 1.00 0.00 N ATOM 121 CA GLY 21 42.853 25.969 8.928 1.00 0.00 C ATOM 122 C GLY 21 42.516 25.254 10.193 1.00 0.00 C ATOM 123 O GLY 21 43.108 24.226 10.514 1.00 0.00 O ATOM 124 N LEU 22 41.531 25.779 10.940 1.00 0.00 N ATOM 126 CA LEU 22 41.113 25.141 12.152 1.00 0.00 C ATOM 127 CB LEU 22 41.126 26.079 13.370 1.00 0.00 C ATOM 128 C LEU 22 39.700 24.737 11.918 1.00 0.00 C ATOM 129 O LEU 22 38.892 25.535 11.446 1.00 0.00 O ATOM 130 N TRP 23 39.358 23.471 12.223 1.00 0.00 N ATOM 132 CA TRP 23 38.009 23.049 11.991 1.00 0.00 C ATOM 133 CB TRP 23 37.848 22.292 10.665 1.00 0.00 C ATOM 134 C TRP 23 37.584 22.150 13.106 1.00 0.00 C ATOM 135 O TRP 23 38.400 21.489 13.744 1.00 0.00 O ATOM 136 N ASP 24 36.266 22.144 13.385 1.00 0.00 N ATOM 138 CA ASP 24 35.702 21.310 14.407 1.00 0.00 C ATOM 139 CB ASP 24 35.454 22.077 15.720 1.00 0.00 C ATOM 140 C ASP 24 34.374 20.870 13.879 1.00 0.00 C ATOM 141 O ASP 24 33.619 21.678 13.346 1.00 0.00 O ATOM 142 N TRP 25 34.058 19.564 13.990 1.00 0.00 N ATOM 144 CA TRP 25 32.799 19.101 13.484 1.00 0.00 C ATOM 145 CB TRP 25 32.957 18.077 12.351 1.00 0.00 C ATOM 146 C TRP 25 32.102 18.392 14.603 1.00 0.00 C ATOM 147 O TRP 25 32.740 17.741 15.429 1.00 0.00 O ATOM 148 N ASN 26 30.762 18.512 14.672 1.00 0.00 N ATOM 150 CA ASN 26 30.065 17.784 15.687 1.00 0.00 C ATOM 151 CB ASN 26 28.665 18.355 16.025 1.00 0.00 C ATOM 152 C ASN 26 30.002 16.385 15.160 1.00 0.00 C ATOM 153 O ASN 26 30.117 16.180 13.953 1.00 0.00 O ATOM 154 N PRO 27 29.868 15.418 16.031 1.00 0.00 N ATOM 155 CA PRO 27 29.983 14.047 15.609 1.00 0.00 C ATOM 156 CB PRO 27 29.615 13.231 16.837 1.00 0.00 C ATOM 157 C PRO 27 29.000 13.754 14.525 1.00 0.00 C ATOM 158 O PRO 27 29.337 13.045 13.577 1.00 0.00 O ATOM 159 N LYS 28 27.767 14.265 14.675 1.00 0.00 N ATOM 161 CA LYS 28 26.718 13.988 13.746 1.00 0.00 C ATOM 162 CB LYS 28 25.355 14.510 14.225 1.00 0.00 C ATOM 163 C LYS 28 26.993 14.625 12.425 1.00 0.00 C ATOM 164 O LYS 28 26.914 13.968 11.388 1.00 0.00 O ATOM 165 N THR 29 27.346 15.924 12.420 1.00 0.00 N ATOM 167 CA THR 29 27.454 16.571 11.152 1.00 0.00 C ATOM 168 CB THR 29 26.102 16.713 10.493 1.00 0.00 C ATOM 169 C THR 29 28.130 17.907 11.276 1.00 0.00 C ATOM 170 O THR 29 29.354 17.986 11.270 1.00 0.00 O ATOM 171 N GLY 30 27.312 18.981 11.332 1.00 0.00 N ATOM 173 CA GLY 30 27.612 20.392 11.374 1.00 0.00 C ATOM 174 C GLY 30 28.998 20.713 11.834 1.00 0.00 C ATOM 175 O GLY 30 29.575 20.056 12.697 1.00 0.00 O ATOM 176 N ALA 31 29.543 21.814 11.271 1.00 0.00 N ATOM 178 CA ALA 31 30.863 22.255 11.607 1.00 0.00 C ATOM 179 CB ALA 31 31.582 22.965 10.446 1.00 0.00 C ATOM 180 C ALA 31 30.731 23.241 12.724 1.00 0.00 C ATOM 181 O ALA 31 30.023 24.240 12.602 1.00 0.00 O ATOM 182 N MET 32 31.377 22.950 13.871 1.00 0.00 N ATOM 184 CA MET 32 31.336 23.847 14.990 1.00 0.00 C ATOM 185 CB MET 32 32.002 23.266 16.248 1.00 0.00 C ATOM 186 C MET 32 32.068 25.100 14.642 1.00 0.00 C ATOM 187 O MET 32 31.555 26.200 14.848 1.00 0.00 O ATOM 188 N TYR 33 33.300 24.974 14.106 1.00 0.00 N ATOM 190 CA TYR 33 33.978 26.178 13.727 1.00 0.00 C ATOM 191 CB TYR 33 34.848 26.822 14.828 1.00 0.00 C ATOM 192 C TYR 33 34.829 25.903 12.532 1.00 0.00 C ATOM 193 O TYR 33 35.294 24.784 12.323 1.00 0.00 O ATOM 194 N LEU 34 35.017 26.939 11.690 1.00 0.00 N ATOM 196 CA LEU 34 35.865 26.849 10.541 1.00 0.00 C ATOM 197 CB LEU 34 35.097 26.594 9.223 1.00 0.00 C ATOM 198 C LEU 34 36.570 28.163 10.460 1.00 0.00 C ATOM 199 O LEU 34 35.989 29.206 10.758 1.00 0.00 O ATOM 200 N SER 35 37.863 28.147 10.093 1.00 0.00 N ATOM 202 CA SER 35 38.587 29.380 10.028 1.00 0.00 C ATOM 203 CB SER 35 40.091 29.209 10.306 1.00 0.00 C ATOM 204 C SER 35 38.417 29.972 8.663 1.00 0.00 C ATOM 205 O SER 35 38.009 29.303 7.717 1.00 0.00 O ATOM 206 N PRO 36 38.704 31.244 8.570 1.00 0.00 N ATOM 207 CA PRO 36 38.624 31.973 7.332 1.00 0.00 C ATOM 208 CB PRO 36 38.680 33.457 7.708 1.00 0.00 C ATOM 209 C PRO 36 39.709 31.541 6.402 1.00 0.00 C ATOM 210 O PRO 36 39.639 31.847 5.214 1.00 0.00 O ATOM 211 N HIS 37 40.718 30.828 6.929 1.00 0.00 N ATOM 213 CA HIS 37 41.839 30.374 6.164 1.00 0.00 C ATOM 214 CB HIS 37 42.850 29.613 7.034 1.00 0.00 C ATOM 215 C HIS 37 41.309 29.437 5.123 1.00 0.00 C ATOM 216 O HIS 37 41.867 29.319 4.033 1.00 0.00 O ATOM 217 N PHE 38 40.205 28.745 5.455 1.00 0.00 N ATOM 219 CA PHE 38 39.560 27.778 4.608 1.00 0.00 C ATOM 220 CB PHE 38 38.272 27.269 5.289 1.00 0.00 C ATOM 221 C PHE 38 39.170 28.471 3.339 1.00 0.00 C ATOM 222 O PHE 38 39.417 27.971 2.243 1.00 0.00 O ATOM 223 N LYS 39 38.579 29.672 3.449 1.00 0.00 N ATOM 225 CA LYS 39 38.098 30.340 2.275 1.00 0.00 C ATOM 226 CB LYS 39 37.525 31.733 2.582 1.00 0.00 C ATOM 227 C LYS 39 39.209 30.572 1.303 1.00 0.00 C ATOM 228 O LYS 39 39.085 30.236 0.127 1.00 0.00 O ATOM 229 N LYS 40 40.333 31.144 1.762 1.00 0.00 N ATOM 231 CA LYS 40 41.370 31.476 0.831 1.00 0.00 C ATOM 232 CB LYS 40 42.536 32.246 1.471 1.00 0.00 C ATOM 233 C LYS 40 41.939 30.240 0.213 1.00 0.00 C ATOM 234 O LYS 40 42.122 30.182 -1.002 1.00 0.00 O ATOM 235 N ILE 41 42.234 29.218 1.037 1.00 0.00 N ATOM 237 CA ILE 41 42.890 28.049 0.524 1.00 0.00 C ATOM 238 CB ILE 41 43.251 27.092 1.623 1.00 0.00 C ATOM 239 C ILE 41 42.018 27.304 -0.438 1.00 0.00 C ATOM 240 O ILE 41 42.413 27.093 -1.584 1.00 0.00 O ATOM 241 N MET 42 40.818 26.869 -0.006 1.00 0.00 N ATOM 243 CA MET 42 39.937 26.134 -0.877 1.00 0.00 C ATOM 244 CB MET 42 38.950 25.183 -0.167 1.00 0.00 C ATOM 245 C MET 42 39.238 26.987 -1.896 1.00 0.00 C ATOM 246 O MET 42 38.969 26.529 -3.006 1.00 0.00 O ATOM 247 N GLY 43 38.882 28.237 -1.556 1.00 0.00 N ATOM 249 CA GLY 43 38.215 29.074 -2.514 1.00 0.00 C ATOM 250 C GLY 43 36.737 28.905 -2.341 1.00 0.00 C ATOM 251 O GLY 43 35.947 29.643 -2.931 1.00 0.00 O ATOM 252 N TYR 44 36.330 27.924 -1.513 1.00 0.00 N ATOM 254 CA TYR 44 34.942 27.671 -1.257 1.00 0.00 C ATOM 255 CB TYR 44 34.623 26.220 -0.855 1.00 0.00 C ATOM 256 C TYR 44 34.524 28.553 -0.133 1.00 0.00 C ATOM 257 O TYR 44 35.315 28.863 0.757 1.00 0.00 O ATOM 258 N GLU 45 33.263 29.014 -0.178 1.00 0.00 N ATOM 260 CA GLU 45 32.770 29.905 0.825 1.00 0.00 C ATOM 261 CB GLU 45 31.399 30.511 0.476 1.00 0.00 C ATOM 262 C GLU 45 32.625 29.169 2.114 1.00 0.00 C ATOM 263 O GLU 45 32.314 27.980 2.158 1.00 0.00 O ATOM 264 N ASP 46 32.870 29.907 3.211 1.00 0.00 N ATOM 266 CA ASP 46 32.770 29.426 4.549 1.00 0.00 C ATOM 267 CB ASP 46 33.205 30.465 5.595 1.00 0.00 C ATOM 268 C ASP 46 31.338 29.135 4.773 1.00 0.00 C ATOM 269 O ASP 46 31.019 28.346 5.648 1.00 0.00 O ATOM 270 N HIS 47 30.458 29.834 4.029 1.00 0.00 N ATOM 272 CA HIS 47 29.027 29.693 4.046 1.00 0.00 C ATOM 273 CB HIS 47 28.322 30.788 3.230 1.00 0.00 C ATOM 274 C HIS 47 28.651 28.374 3.441 1.00 0.00 C ATOM 275 O HIS 47 27.589 27.826 3.736 1.00 0.00 O ATOM 276 N GLU 48 29.474 27.870 2.506 1.00 0.00 N ATOM 278 CA GLU 48 29.186 26.614 1.880 1.00 0.00 C ATOM 279 CB GLU 48 30.140 26.305 0.711 1.00 0.00 C ATOM 280 C GLU 48 29.304 25.497 2.877 1.00 0.00 C ATOM 281 O GLU 48 28.444 24.619 2.935 1.00 0.00 O ATOM 282 N LEU 49 30.375 25.483 3.696 1.00 0.00 N ATOM 284 CA LEU 49 30.509 24.367 4.592 1.00 0.00 C ATOM 285 CB LEU 49 31.902 24.183 5.236 1.00 0.00 C ATOM 286 C LEU 49 29.468 24.296 5.692 1.00 0.00 C ATOM 287 O LEU 49 28.990 23.194 5.932 1.00 0.00 O ATOM 288 N PRO 50 29.072 25.308 6.428 1.00 0.00 N ATOM 289 CA PRO 50 28.120 25.095 7.478 1.00 0.00 C ATOM 290 CB PRO 50 27.867 26.465 8.082 1.00 0.00 C ATOM 291 C PRO 50 26.836 24.592 6.902 1.00 0.00 C ATOM 292 O PRO 50 26.180 23.775 7.545 1.00 0.00 O ATOM 293 N ASP 51 26.447 25.079 5.707 1.00 0.00 N ATOM 295 CA ASP 51 25.189 24.685 5.148 1.00 0.00 C ATOM 296 CB ASP 51 24.924 25.316 3.768 1.00 0.00 C ATOM 297 C ASP 51 25.245 23.209 4.981 1.00 0.00 C ATOM 298 O ASP 51 24.339 22.490 5.400 1.00 0.00 O ATOM 299 N GLU 52 26.333 22.713 4.370 1.00 0.00 N ATOM 301 CA GLU 52 26.483 21.299 4.261 1.00 0.00 C ATOM 302 CB GLU 52 26.402 20.789 2.810 1.00 0.00 C ATOM 303 C GLU 52 27.835 21.001 4.812 1.00 0.00 C ATOM 304 O GLU 52 28.849 21.323 4.196 1.00 0.00 O ATOM 305 N ILE 53 27.892 20.422 6.026 1.00 0.00 N ATOM 307 CA ILE 53 29.184 20.143 6.571 1.00 0.00 C ATOM 308 CB ILE 53 29.242 19.698 8.000 1.00 0.00 C ATOM 309 C ILE 53 29.807 19.091 5.735 1.00 0.00 C ATOM 310 O ILE 53 31.021 19.087 5.542 1.00 0.00 O ATOM 311 N THR 54 28.987 18.139 5.255 1.00 0.00 N ATOM 313 CA THR 54 29.521 17.186 4.337 1.00 0.00 C ATOM 314 CB THR 54 28.539 16.123 3.927 1.00 0.00 C ATOM 315 C THR 54 29.838 18.022 3.152 1.00 0.00 C ATOM 316 O THR 54 29.396 19.155 3.027 1.00 0.00 O ATOM 317 N GLY 55 30.609 17.530 2.202 1.00 0.00 N ATOM 319 CA GLY 55 30.938 18.497 1.209 1.00 0.00 C ATOM 320 C GLY 55 32.405 18.669 1.331 1.00 0.00 C ATOM 321 O GLY 55 33.077 19.071 0.383 1.00 0.00 O ATOM 322 N HIS 56 32.942 18.390 2.530 1.00 0.00 N ATOM 324 CA HIS 56 34.364 18.376 2.650 1.00 0.00 C ATOM 325 CB HIS 56 34.866 18.338 4.101 1.00 0.00 C ATOM 326 C HIS 56 34.827 17.177 1.885 1.00 0.00 C ATOM 327 O HIS 56 35.884 17.186 1.259 1.00 0.00 O ATOM 328 N ARG 57 34.018 16.099 1.912 1.00 0.00 N ATOM 330 CA ARG 57 34.362 14.896 1.211 1.00 0.00 C ATOM 331 CB ARG 57 33.396 13.726 1.493 1.00 0.00 C ATOM 332 C ARG 57 34.381 15.161 -0.268 1.00 0.00 C ATOM 333 O ARG 57 35.230 14.625 -0.980 1.00 0.00 O ATOM 334 N GLU 58 33.443 15.992 -0.775 1.00 0.00 N ATOM 336 CA GLU 58 33.350 16.259 -2.187 1.00 0.00 C ATOM 337 CB GLU 58 32.104 17.062 -2.600 1.00 0.00 C ATOM 338 C GLU 58 34.546 17.031 -2.657 1.00 0.00 C ATOM 339 O GLU 58 34.987 16.869 -3.793 1.00 0.00 O ATOM 340 N SER 59 35.083 17.909 -1.793 1.00 0.00 N ATOM 342 CA SER 59 36.179 18.778 -2.121 1.00 0.00 C ATOM 343 CB SER 59 36.396 19.897 -1.084 1.00 0.00 C ATOM 344 C SER 59 37.451 17.997 -2.195 1.00 0.00 C ATOM 345 O SER 59 38.533 18.573 -2.151 1.00 0.00 O ATOM 346 N ILE 60 37.376 16.663 -2.289 1.00 0.00 N ATOM 348 CA ILE 60 38.590 15.899 -2.282 1.00 0.00 C ATOM 349 CB ILE 60 38.536 14.766 -1.296 1.00 0.00 C ATOM 350 C ILE 60 38.767 15.280 -3.635 1.00 0.00 C ATOM 351 O ILE 60 37.804 15.096 -4.380 1.00 0.00 O ATOM 352 N HIS 61 40.030 14.986 -4.004 1.00 0.00 N ATOM 354 CA HIS 61 40.333 14.353 -5.257 1.00 0.00 C ATOM 355 CB HIS 61 41.843 14.164 -5.490 1.00 0.00 C ATOM 356 C HIS 61 39.696 12.999 -5.200 1.00 0.00 C ATOM 357 O HIS 61 39.611 12.382 -4.138 1.00 0.00 O ATOM 358 N PRO 62 39.230 12.530 -6.319 1.00 0.00 N ATOM 359 CA PRO 62 38.510 11.288 -6.352 1.00 0.00 C ATOM 360 CB PRO 62 37.953 11.176 -7.771 1.00 0.00 C ATOM 361 C PRO 62 39.294 10.099 -5.898 1.00 0.00 C ATOM 362 O PRO 62 38.697 9.198 -5.308 1.00 0.00 O ATOM 363 N ASP 63 40.611 10.045 -6.170 1.00 0.00 N ATOM 365 CA ASP 63 41.350 8.891 -5.752 1.00 0.00 C ATOM 366 CB ASP 63 42.767 8.781 -6.356 1.00 0.00 C ATOM 367 C ASP 63 41.456 8.895 -4.260 1.00 0.00 C ATOM 368 O ASP 63 41.385 7.848 -3.619 1.00 0.00 O ATOM 369 N ASP 64 41.636 10.090 -3.670 1.00 0.00 N ATOM 371 CA ASP 64 41.795 10.256 -2.254 1.00 0.00 C ATOM 372 CB ASP 64 42.286 11.668 -1.875 1.00 0.00 C ATOM 373 C ASP 64 40.500 9.978 -1.551 1.00 0.00 C ATOM 374 O ASP 64 40.493 9.459 -0.435 1.00 0.00 O ATOM 375 N ARG 65 39.361 10.287 -2.200 1.00 0.00 N ATOM 377 CA ARG 65 38.093 10.186 -1.536 1.00 0.00 C ATOM 378 CB ARG 65 36.898 10.521 -2.454 1.00 0.00 C ATOM 379 C ARG 65 37.873 8.796 -1.036 1.00 0.00 C ATOM 380 O ARG 65 37.417 8.606 0.091 1.00 0.00 O ATOM 381 N ALA 66 38.180 7.773 -1.844 1.00 0.00 N ATOM 383 CA ALA 66 37.853 6.468 -1.356 1.00 0.00 C ATOM 384 CB ALA 66 38.152 5.365 -2.386 1.00 0.00 C ATOM 385 C ALA 66 38.629 6.154 -0.111 1.00 0.00 C ATOM 386 O ALA 66 38.060 5.779 0.913 1.00 0.00 O ATOM 387 N ARG 67 39.960 6.332 -0.159 1.00 0.00 N ATOM 389 CA ARG 67 40.787 5.934 0.946 1.00 0.00 C ATOM 390 CB ARG 67 42.284 5.947 0.593 1.00 0.00 C ATOM 391 C ARG 67 40.616 6.807 2.150 1.00 0.00 C ATOM 392 O ARG 67 40.452 6.315 3.264 1.00 0.00 O ATOM 393 N VAL 68 40.630 8.138 1.947 1.00 0.00 N ATOM 395 CA VAL 68 40.686 9.064 3.043 1.00 0.00 C ATOM 396 CB VAL 68 40.814 10.493 2.588 1.00 0.00 C ATOM 397 C VAL 68 39.482 8.995 3.918 1.00 0.00 C ATOM 398 O VAL 68 39.602 8.877 5.138 1.00 0.00 O ATOM 399 N LEU 69 38.282 9.050 3.326 1.00 0.00 N ATOM 401 CA LEU 69 37.117 9.107 4.156 1.00 0.00 C ATOM 402 CB LEU 69 35.799 9.226 3.371 1.00 0.00 C ATOM 403 C LEU 69 36.999 7.868 4.980 1.00 0.00 C ATOM 404 O LEU 69 36.768 7.943 6.186 1.00 0.00 O ATOM 405 N ALA 70 37.188 6.691 4.359 1.00 0.00 N ATOM 407 CA ALA 70 36.986 5.462 5.069 1.00 0.00 C ATOM 408 CB ALA 70 37.190 4.223 4.181 1.00 0.00 C ATOM 409 C ALA 70 37.950 5.361 6.207 1.00 0.00 C ATOM 410 O ALA 70 37.578 4.964 7.310 1.00 0.00 O ATOM 411 N ALA 71 39.223 5.713 5.965 1.00 0.00 N ATOM 413 CA ALA 71 40.223 5.613 6.988 1.00 0.00 C ATOM 414 CB ALA 71 41.623 5.977 6.472 1.00 0.00 C ATOM 415 C ALA 71 39.889 6.564 8.093 1.00 0.00 C ATOM 416 O ALA 71 39.999 6.240 9.274 1.00 0.00 O ATOM 417 N LEU 72 39.451 7.776 7.709 1.00 0.00 N ATOM 419 CA LEU 72 39.113 8.856 8.594 1.00 0.00 C ATOM 420 CB LEU 72 38.682 10.073 7.725 1.00 0.00 C ATOM 421 C LEU 72 37.986 8.409 9.473 1.00 0.00 C ATOM 422 O LEU 72 38.024 8.582 10.693 1.00 0.00 O ATOM 423 N LYS 73 36.968 7.785 8.864 1.00 0.00 N ATOM 425 CA LYS 73 35.785 7.378 9.561 1.00 0.00 C ATOM 426 CB LYS 73 34.800 6.659 8.618 1.00 0.00 C ATOM 427 C LYS 73 36.150 6.381 10.613 1.00 0.00 C ATOM 428 O LYS 73 35.757 6.506 11.772 1.00 0.00 O ATOM 429 N ALA 74 36.950 5.372 10.229 1.00 0.00 N ATOM 431 CA ALA 74 37.251 4.299 11.126 1.00 0.00 C ATOM 432 CB ALA 74 38.118 3.213 10.469 1.00 0.00 C ATOM 433 C ALA 74 37.991 4.796 12.323 1.00 0.00 C ATOM 434 O ALA 74 37.637 4.463 13.453 1.00 0.00 O ATOM 435 N HIS 75 39.029 5.628 12.117 1.00 0.00 N ATOM 437 CA HIS 75 39.785 6.045 13.257 1.00 0.00 C ATOM 438 CB HIS 75 41.157 6.677 12.989 1.00 0.00 C ATOM 439 C HIS 75 39.006 6.952 14.146 1.00 0.00 C ATOM 440 O HIS 75 39.175 6.893 15.361 1.00 0.00 O ATOM 441 N LEU 76 38.122 7.794 13.582 1.00 0.00 N ATOM 443 CA LEU 76 37.403 8.750 14.375 1.00 0.00 C ATOM 444 CB LEU 76 36.340 9.484 13.525 1.00 0.00 C ATOM 445 C LEU 76 36.660 7.985 15.423 1.00 0.00 C ATOM 446 O LEU 76 36.744 8.308 16.607 1.00 0.00 O ATOM 447 N GLU 77 35.947 6.921 15.005 1.00 0.00 N ATOM 449 CA GLU 77 35.127 6.131 15.879 1.00 0.00 C ATOM 450 CB GLU 77 34.369 5.032 15.116 1.00 0.00 C ATOM 451 C GLU 77 35.991 5.450 16.896 1.00 0.00 C ATOM 452 O GLU 77 35.641 5.388 18.075 1.00 0.00 O ATOM 453 N HIS 78 37.157 4.944 16.450 1.00 0.00 N ATOM 455 CA HIS 78 38.100 4.229 17.265 1.00 0.00 C ATOM 456 CB HIS 78 39.285 3.638 16.482 1.00 0.00 C ATOM 457 C HIS 78 38.645 5.170 18.283 1.00 0.00 C ATOM 458 O HIS 78 39.188 4.748 19.302 1.00 0.00 O ATOM 459 N ARG 79 38.520 6.480 18.012 1.00 0.00 N ATOM 461 CA ARG 79 39.025 7.481 18.900 1.00 0.00 C ATOM 462 CB ARG 79 38.629 7.234 20.365 1.00 0.00 C ATOM 463 C ARG 79 40.514 7.498 18.808 1.00 0.00 C ATOM 464 O ARG 79 41.215 7.768 19.781 1.00 0.00 O ATOM 465 N ASP 80 41.025 7.203 17.600 1.00 0.00 N ATOM 467 CA ASP 80 42.435 7.256 17.355 1.00 0.00 C ATOM 468 CB ASP 80 42.938 6.082 16.488 1.00 0.00 C ATOM 469 C ASP 80 42.645 8.514 16.570 1.00 0.00 C ATOM 470 O ASP 80 41.809 8.895 15.751 1.00 0.00 O ATOM 471 N THR 81 43.749 9.225 16.836 1.00 0.00 N ATOM 473 CA THR 81 44.020 10.421 16.098 1.00 0.00 C ATOM 474 CB THR 81 45.053 11.283 16.780 1.00 0.00 C ATOM 475 C THR 81 44.572 9.979 14.784 1.00 0.00 C ATOM 476 O THR 81 45.220 8.941 14.705 1.00 0.00 O ATOM 477 N TYR 82 44.277 10.713 13.694 1.00 0.00 N ATOM 479 CA TYR 82 44.921 10.351 12.467 1.00 0.00 C ATOM 480 CB TYR 82 44.136 9.489 11.459 1.00 0.00 C ATOM 481 C TYR 82 45.337 11.558 11.725 1.00 0.00 C ATOM 482 O TYR 82 44.876 12.673 11.980 1.00 0.00 O ATOM 483 N ASP 83 46.293 11.347 10.807 1.00 0.00 N ATOM 485 CA ASP 83 46.709 12.383 9.926 1.00 0.00 C ATOM 486 CB ASP 83 48.025 13.084 10.301 1.00 0.00 C ATOM 487 C ASP 83 46.857 11.756 8.580 1.00 0.00 C ATOM 488 O ASP 83 47.395 10.661 8.443 1.00 0.00 O ATOM 489 N VAL 84 46.324 12.442 7.555 1.00 0.00 N ATOM 491 CA VAL 84 46.405 11.937 6.224 1.00 0.00 C ATOM 492 CB VAL 84 45.131 11.273 5.778 1.00 0.00 C ATOM 493 C VAL 84 46.716 13.082 5.317 1.00 0.00 C ATOM 494 O VAL 84 46.484 14.244 5.652 1.00 0.00 O ATOM 495 N GLU 85 47.303 12.764 4.149 1.00 0.00 N ATOM 497 CA GLU 85 47.597 13.739 3.152 1.00 0.00 C ATOM 498 CB GLU 85 48.890 13.518 2.358 1.00 0.00 C ATOM 499 C GLU 85 46.500 13.586 2.153 1.00 0.00 C ATOM 500 O GLU 85 46.000 12.483 1.932 1.00 0.00 O ATOM 501 N TYR 86 46.111 14.705 1.518 1.00 0.00 N ATOM 503 CA TYR 86 44.989 14.780 0.626 1.00 0.00 C ATOM 504 CB TYR 86 43.942 15.801 1.042 1.00 0.00 C ATOM 505 C TYR 86 45.360 15.576 -0.568 1.00 0.00 C ATOM 506 O TYR 86 46.321 16.333 -0.589 1.00 0.00 O ATOM 507 N ARG 87 44.494 15.438 -1.576 1.00 0.00 N ATOM 509 CA ARG 87 44.529 16.298 -2.697 1.00 0.00 C ATOM 510 CB ARG 87 44.606 15.487 -3.999 1.00 0.00 C ATOM 511 C ARG 87 43.189 16.968 -2.591 1.00 0.00 C ATOM 512 O ARG 87 42.158 16.368 -2.891 1.00 0.00 O ATOM 513 N VAL 88 43.152 18.221 -2.103 1.00 0.00 N ATOM 515 CA VAL 88 41.891 18.888 -1.941 1.00 0.00 C ATOM 516 CB VAL 88 41.873 19.759 -0.725 1.00 0.00 C ATOM 517 C VAL 88 41.633 19.701 -3.161 1.00 0.00 C ATOM 518 O VAL 88 42.557 20.217 -3.790 1.00 0.00 O ATOM 519 N ARG 89 40.352 19.824 -3.551 1.00 0.00 N ATOM 521 CA ARG 89 40.098 20.541 -4.758 1.00 0.00 C ATOM 522 CB ARG 89 39.091 19.872 -5.704 1.00 0.00 C ATOM 523 C ARG 89 39.592 21.894 -4.440 1.00 0.00 C ATOM 524 O ARG 89 38.758 22.086 -3.558 1.00 0.00 O ATOM 525 N THR 90 40.127 22.879 -5.173 1.00 0.00 N ATOM 527 CA THR 90 39.704 24.232 -5.023 1.00 0.00 C ATOM 528 CB THR 90 40.702 25.207 -5.583 1.00 0.00 C ATOM 529 C THR 90 38.451 24.324 -5.824 1.00 0.00 C ATOM 530 O THR 90 38.153 23.442 -6.627 1.00 0.00 O ATOM 531 N ARG 91 37.661 25.388 -5.620 1.00 0.00 N ATOM 533 CA ARG 91 36.460 25.479 -6.388 1.00 0.00 C ATOM 534 CB ARG 91 35.549 26.651 -5.992 1.00 0.00 C ATOM 535 C ARG 91 36.852 25.617 -7.825 1.00 0.00 C ATOM 536 O ARG 91 36.161 25.123 -8.715 1.00 0.00 O ATOM 537 N SER 92 37.994 26.287 -8.083 1.00 0.00 N ATOM 539 CA SER 92 38.494 26.503 -9.413 1.00 0.00 C ATOM 540 CB SER 92 39.806 27.306 -9.434 1.00 0.00 C ATOM 541 C SER 92 38.777 25.175 -10.051 1.00 0.00 C ATOM 542 O SER 92 38.727 25.053 -11.274 1.00 0.00 O ATOM 543 N GLY 93 39.073 24.133 -9.247 1.00 0.00 N ATOM 545 CA GLY 93 39.314 22.846 -9.835 1.00 0.00 C ATOM 546 C GLY 93 40.747 22.444 -9.665 1.00 0.00 C ATOM 547 O GLY 93 41.082 21.276 -9.864 1.00 0.00 O ATOM 548 N ASP 94 41.647 23.377 -9.300 1.00 0.00 N ATOM 550 CA ASP 94 43.005 22.938 -9.143 1.00 0.00 C ATOM 551 CB ASP 94 44.065 24.058 -9.135 1.00 0.00 C ATOM 552 C ASP 94 43.112 22.191 -7.856 1.00 0.00 C ATOM 553 O ASP 94 42.303 22.366 -6.947 1.00 0.00 O ATOM 554 N PHE 95 44.129 21.316 -7.751 1.00 0.00 N ATOM 556 CA PHE 95 44.265 20.547 -6.558 1.00 0.00 C ATOM 557 CB PHE 95 44.583 19.061 -6.791 1.00 0.00 C ATOM 558 C PHE 95 45.350 21.114 -5.710 1.00 0.00 C ATOM 559 O PHE 95 46.408 21.523 -6.186 1.00 0.00 O ATOM 560 N ARG 96 45.070 21.164 -4.395 1.00 0.00 N ATOM 562 CA ARG 96 46.010 21.631 -3.429 1.00 0.00 C ATOM 563 CB ARG 96 45.436 22.747 -2.550 1.00 0.00 C ATOM 564 C ARG 96 46.258 20.465 -2.535 1.00 0.00 C ATOM 565 O ARG 96 45.334 19.736 -2.183 1.00 0.00 O ATOM 566 N TRP 97 47.525 20.230 -2.156 1.00 0.00 N ATOM 568 CA TRP 97 47.755 19.116 -1.291 1.00 0.00 C ATOM 569 CB TRP 97 49.110 18.433 -1.546 1.00 0.00 C ATOM 570 C TRP 97 47.656 19.615 0.113 1.00 0.00 C ATOM 571 O TRP 97 48.220 20.650 0.461 1.00 0.00 O ATOM 572 N ILE 98 46.891 18.892 0.954 1.00 0.00 N ATOM 574 CA ILE 98 46.685 19.338 2.303 1.00 0.00 C ATOM 575 CB ILE 98 45.298 19.864 2.544 1.00 0.00 C ATOM 576 C ILE 98 46.941 18.223 3.255 1.00 0.00 C ATOM 577 O ILE 98 46.613 17.067 2.992 1.00 0.00 O ATOM 578 N GLN 99 47.580 18.550 4.397 1.00 0.00 N ATOM 580 CA GLN 99 47.750 17.543 5.397 1.00 0.00 C ATOM 581 CB GLN 99 49.167 17.433 5.998 1.00 0.00 C ATOM 582 C GLN 99 46.769 17.837 6.477 1.00 0.00 C ATOM 583 O GLN 99 46.734 18.936 7.036 1.00 0.00 O ATOM 584 N SER 100 45.919 16.838 6.787 1.00 0.00 N ATOM 586 CA SER 100 44.900 17.046 7.768 1.00 0.00 C ATOM 587 CB SER 100 43.494 16.627 7.292 1.00 0.00 C ATOM 588 C SER 100 45.226 16.210 8.955 1.00 0.00 C ATOM 589 O SER 100 45.648 15.060 8.842 1.00 0.00 O ATOM 590 N ARG 101 45.050 16.809 10.145 1.00 0.00 N ATOM 592 CA ARG 101 45.271 16.101 11.365 1.00 0.00 C ATOM 593 CB ARG 101 46.401 16.695 12.221 1.00 0.00 C ATOM 594 C ARG 101 44.001 16.217 12.130 1.00 0.00 C ATOM 595 O ARG 101 43.396 17.286 12.191 1.00 0.00 O ATOM 596 N GLY 102 43.552 15.102 12.730 1.00 0.00 N ATOM 598 CA GLY 102 42.313 15.178 13.434 1.00 0.00 C ATOM 599 C GLY 102 42.462 14.441 14.711 1.00 0.00 C ATOM 600 O GLY 102 43.262 13.513 14.825 1.00 0.00 O ATOM 601 N GLN 103 41.680 14.864 15.714 1.00 0.00 N ATOM 603 CA GLN 103 41.683 14.202 16.975 1.00 0.00 C ATOM 604 CB GLN 103 42.388 14.990 18.083 1.00 0.00 C ATOM 605 C GLN 103 40.254 14.096 17.375 1.00 0.00 C ATOM 606 O GLN 103 39.441 14.945 17.018 1.00 0.00 O ATOM 607 N ALA 104 39.899 13.022 18.099 1.00 0.00 N ATOM 609 CA ALA 104 38.544 12.892 18.532 1.00 0.00 C ATOM 610 CB ALA 104 38.067 11.435 18.640 1.00 0.00 C ATOM 611 C ALA 104 38.413 13.519 19.884 1.00 0.00 C ATOM 612 O ALA 104 39.352 13.529 20.678 1.00 0.00 O ATOM 613 N LEU 105 37.218 14.077 20.146 1.00 0.00 N ATOM 615 CA LEU 105 36.858 14.637 21.413 1.00 0.00 C ATOM 616 CB LEU 105 36.088 15.964 21.300 1.00 0.00 C ATOM 617 C LEU 105 35.925 13.630 21.995 1.00 0.00 C ATOM 618 O LEU 105 35.066 13.109 21.290 1.00 0.00 O ATOM 619 N TRP 106 36.066 13.342 23.305 1.00 0.00 N ATOM 621 CA TRP 106 35.326 12.281 23.926 1.00 0.00 C ATOM 622 CB TRP 106 36.228 11.395 24.797 1.00 0.00 C ATOM 623 C TRP 106 34.301 12.841 24.857 1.00 0.00 C ATOM 624 O TRP 106 34.424 13.958 25.360 1.00 0.00 O ATOM 625 N ASN 107 33.248 12.042 25.106 1.00 0.00 N ATOM 627 CA ASN 107 32.200 12.408 26.011 1.00 0.00 C ATOM 628 CB ASN 107 30.796 12.375 25.375 1.00 0.00 C ATOM 629 C ASN 107 32.248 11.434 27.146 1.00 0.00 C ATOM 630 O ASN 107 33.130 10.577 27.202 1.00 0.00 O ATOM 631 N SER 108 31.298 11.549 28.092 1.00 0.00 N ATOM 633 CA SER 108 31.288 10.712 29.260 1.00 0.00 C ATOM 634 CB SER 108 30.085 11.001 30.175 1.00 0.00 C ATOM 635 C SER 108 31.191 9.281 28.832 1.00 0.00 C ATOM 636 O SER 108 31.792 8.399 29.443 1.00 0.00 O ATOM 637 N ALA 109 30.429 9.020 27.755 1.00 0.00 N ATOM 639 CA ALA 109 30.244 7.688 27.249 1.00 0.00 C ATOM 640 CB ALA 109 29.287 7.626 26.050 1.00 0.00 C ATOM 641 C ALA 109 31.577 7.167 26.803 1.00 0.00 C ATOM 642 O ALA 109 31.862 5.979 26.934 1.00 0.00 O ATOM 643 N GLY 110 32.436 8.048 26.256 1.00 0.00 N ATOM 645 CA GLY 110 33.715 7.607 25.779 1.00 0.00 C ATOM 646 C GLY 110 33.648 7.557 24.288 1.00 0.00 C ATOM 647 O GLY 110 34.643 7.283 23.618 1.00 0.00 O ATOM 648 N GLU 111 32.450 7.813 23.732 1.00 0.00 N ATOM 650 CA GLU 111 32.301 7.825 22.308 1.00 0.00 C ATOM 651 CB GLU 111 30.851 7.640 21.844 1.00 0.00 C ATOM 652 C GLU 111 32.765 9.153 21.807 1.00 0.00 C ATOM 653 O GLU 111 32.762 10.145 22.536 1.00 0.00 O ATOM 654 N PRO 112 33.199 9.187 20.573 1.00 0.00 N ATOM 655 CA PRO 112 33.650 10.432 20.017 1.00 0.00 C ATOM 656 CB PRO 112 34.346 10.075 18.706 1.00 0.00 C ATOM 657 C PRO 112 32.530 11.411 19.881 1.00 0.00 C ATOM 658 O PRO 112 31.611 11.156 19.103 1.00 0.00 O ATOM 659 N TYR 113 32.591 12.514 20.656 1.00 0.00 N ATOM 661 CA TYR 113 31.637 13.580 20.635 1.00 0.00 C ATOM 662 CB TYR 113 31.702 14.450 21.901 1.00 0.00 C ATOM 663 C TYR 113 31.864 14.466 19.457 1.00 0.00 C ATOM 664 O TYR 113 30.922 14.827 18.765 1.00 0.00 O ATOM 665 N ARG 114 33.122 14.860 19.186 1.00 0.00 N ATOM 667 CA ARG 114 33.330 15.762 18.089 1.00 0.00 C ATOM 668 CB ARG 114 33.229 17.243 18.491 1.00 0.00 C ATOM 669 C ARG 114 34.706 15.530 17.566 1.00 0.00 C ATOM 670 O ARG 114 35.488 14.787 18.156 1.00 0.00 O ATOM 671 N MET 115 35.019 16.147 16.409 1.00 0.00 N ATOM 673 CA MET 115 36.323 16.009 15.835 1.00 0.00 C ATOM 674 CB MET 115 36.346 15.504 14.384 1.00 0.00 C ATOM 675 C MET 115 36.907 17.377 15.745 1.00 0.00 C ATOM 676 O MET 115 36.217 18.342 15.420 1.00 0.00 O ATOM 677 N VAL 116 38.215 17.486 16.034 1.00 0.00 N ATOM 679 CA VAL 116 38.877 18.750 15.940 1.00 0.00 C ATOM 680 CB VAL 116 39.388 19.256 17.254 1.00 0.00 C ATOM 681 C VAL 116 40.074 18.510 15.098 1.00 0.00 C ATOM 682 O VAL 116 40.621 17.407 15.092 1.00 0.00 O ATOM 683 N GLY 117 40.519 19.533 14.350 1.00 0.00 N ATOM 685 CA GLY 117 41.668 19.256 13.556 1.00 0.00 C ATOM 686 C GLY 117 42.162 20.502 12.912 1.00 0.00 C ATOM 687 O GLY 117 41.596 21.585 13.052 1.00 0.00 O ATOM 688 N TRP 118 43.273 20.326 12.181 1.00 0.00 N ATOM 690 CA TRP 118 43.981 21.351 11.485 1.00 0.00 C ATOM 691 CB TRP 118 45.367 21.538 12.121 1.00 0.00 C ATOM 692 C TRP 118 44.155 20.875 10.080 1.00 0.00 C ATOM 693 O TRP 118 44.397 19.694 9.841 1.00 0.00 O ATOM 694 N ILE 119 44.000 21.804 9.117 1.00 0.00 N ATOM 696 CA ILE 119 44.188 21.546 7.724 1.00 0.00 C ATOM 697 CB ILE 119 42.943 21.886 6.938 1.00 0.00 C ATOM 698 C ILE 119 45.312 22.438 7.315 1.00 0.00 C ATOM 699 O ILE 119 45.278 23.643 7.550 1.00 0.00 O ATOM 700 N MET 120 46.359 21.865 6.691 1.00 0.00 N ATOM 702 CA MET 120 47.458 22.701 6.310 1.00 0.00 C ATOM 703 CB MET 120 48.785 22.335 6.996 1.00 0.00 C ATOM 704 C MET 120 47.656 22.563 4.839 1.00 0.00 C ATOM 705 O MET 120 47.564 21.467 4.284 1.00 0.00 O ATOM 706 N ASP 121 47.929 23.701 4.173 1.00 0.00 N ATOM 708 CA ASP 121 48.149 23.744 2.759 1.00 0.00 C ATOM 709 CB ASP 121 47.835 25.138 2.179 1.00 0.00 C ATOM 710 C ASP 121 49.600 23.462 2.551 1.00 0.00 C ATOM 711 O ASP 121 50.451 24.333 2.713 1.00 0.00 O TER END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 488 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 38.03 81.6 190 98.4 193 ARMSMC SECONDARY STRUCTURE . . 26.23 87.2 109 98.2 111 ARMSMC SURFACE . . . . . . . . 44.76 77.8 126 97.7 129 ARMSMC BURIED . . . . . . . . 18.68 89.1 64 100.0 64 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 74 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 71 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 42 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 51 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 23 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 55 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 44 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 30 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 36 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 13 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 13 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 7 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 4 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 3 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 2 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 2 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 2.61 (Number of atoms: 99) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 2.61 99 100.0 99 CRMSCA CRN = ALL/NP . . . . . 0.0263 CRMSCA SECONDARY STRUCTURE . . 1.77 57 100.0 57 CRMSCA SURFACE . . . . . . . . 3.01 66 100.0 66 CRMSCA BURIED . . . . . . . . 1.50 33 100.0 33 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 2.68 488 100.0 488 CRMSMC SECONDARY STRUCTURE . . 1.83 282 100.0 282 CRMSMC SURFACE . . . . . . . . 3.08 326 100.0 326 CRMSMC BURIED . . . . . . . . 1.58 162 100.0 162 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 3.02 92 21.5 427 CRMSSC RELIABLE SIDE CHAINS . 3.02 92 24.4 377 CRMSSC SECONDARY STRUCTURE . . 2.18 54 19.4 279 CRMSSC SURFACE . . . . . . . . 3.43 62 20.9 297 CRMSSC BURIED . . . . . . . . 1.93 30 23.1 130 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 2.68 488 59.3 823 CRMSALL SECONDARY STRUCTURE . . 1.83 282 55.6 507 CRMSALL SURFACE . . . . . . . . 3.08 326 58.1 561 CRMSALL BURIED . . . . . . . . 1.58 162 61.8 262 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.072 1.000 0.500 99 100.0 99 ERRCA SECONDARY STRUCTURE . . 1.493 1.000 0.500 57 100.0 57 ERRCA SURFACE . . . . . . . . 2.452 1.000 0.500 66 100.0 66 ERRCA BURIED . . . . . . . . 1.311 1.000 0.500 33 100.0 33 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.107 1.000 0.500 488 100.0 488 ERRMC SECONDARY STRUCTURE . . 1.531 1.000 0.500 282 100.0 282 ERRMC SURFACE . . . . . . . . 2.486 1.000 0.500 326 100.0 326 ERRMC BURIED . . . . . . . . 1.345 1.000 0.500 162 100.0 162 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.376 1.000 0.500 92 21.5 427 ERRSC RELIABLE SIDE CHAINS . 2.376 1.000 0.500 92 24.4 377 ERRSC SECONDARY STRUCTURE . . 1.819 1.000 0.500 54 19.4 279 ERRSC SURFACE . . . . . . . . 2.729 1.000 0.500 62 20.9 297 ERRSC BURIED . . . . . . . . 1.645 1.000 0.500 30 23.1 130 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.107 1.000 0.500 488 59.3 823 ERRALL SECONDARY STRUCTURE . . 1.531 1.000 0.500 282 55.6 507 ERRALL SURFACE . . . . . . . . 2.486 1.000 0.500 326 58.1 561 ERRALL BURIED . . . . . . . . 1.345 1.000 0.500 162 61.8 262 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 28 65 78 90 99 99 99 DISTCA CA (P) 28.28 65.66 78.79 90.91 100.00 99 DISTCA CA (RMS) 0.79 1.25 1.53 1.93 2.61 DISTCA ALL (N) 122 312 388 446 488 488 823 DISTALL ALL (P) 14.82 37.91 47.14 54.19 59.30 823 DISTALL ALL (RMS) 0.74 1.24 1.56 1.98 2.68 DISTALL END of the results output