####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 70 ( 280), selected 70 , name T0521AL285_1-D2 # Molecule2: number of CA atoms 70 ( 583), selected 70 , name T0521-D2.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0521AL285_1-D2.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 70 35 - 104 3.63 3.63 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 35 - 69 1.91 4.10 LCS_AVERAGE: 44.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 40 - 67 0.97 4.24 LONGEST_CONTINUOUS_SEGMENT: 28 41 - 68 0.95 4.30 LCS_AVERAGE: 30.33 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 70 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT N 35 N 35 24 35 70 18 30 38 44 52 56 58 63 65 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT H 36 H 36 24 35 70 18 30 38 45 53 56 59 63 65 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT I 37 I 37 24 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT K 38 K 38 24 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT Y 39 Y 39 25 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT I 40 I 40 28 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT N 41 N 41 28 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT E 42 E 42 28 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT L 43 L 43 28 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT F 44 F 44 28 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT Y 45 Y 45 28 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT K 46 K 46 28 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT L 47 L 47 28 35 70 16 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT D 48 D 48 28 35 70 16 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT T 49 T 49 28 35 70 10 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT N 50 N 50 28 35 70 10 27 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT H 51 H 51 28 35 70 10 28 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT N 52 N 52 28 35 70 10 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT G 53 G 53 28 35 70 10 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT S 54 S 54 28 35 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT L 55 L 55 28 35 70 9 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT S 56 S 56 28 35 70 11 28 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT H 57 H 57 28 35 70 11 21 36 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT R 58 R 58 28 35 70 11 21 30 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT E 59 E 59 28 35 70 7 21 36 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT I 60 I 60 28 35 70 11 21 30 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT Y 61 Y 61 28 35 70 11 21 30 41 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT T 62 T 62 28 35 70 11 21 30 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT V 63 V 63 28 35 70 11 21 35 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT L 64 L 64 28 35 70 11 21 30 39 52 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT A 65 A 65 28 35 70 11 21 28 39 46 54 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT S 66 S 66 28 35 70 10 19 30 39 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT V 67 V 67 28 35 70 11 21 30 44 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT G 68 G 68 28 35 70 10 14 27 32 40 53 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT I 69 I 69 15 35 70 9 15 18 26 35 44 55 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT K 70 K 70 15 31 70 9 15 18 26 35 43 55 62 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT K 71 K 71 15 28 70 9 15 18 26 35 44 55 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT W 72 W 72 15 28 70 9 15 18 26 34 44 57 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT D 73 D 73 15 28 70 7 15 18 26 42 52 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT I 74 I 74 15 28 70 9 15 19 30 47 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT N 75 N 75 15 28 70 9 15 19 30 47 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT R 76 R 76 15 28 70 9 15 21 35 50 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT I 77 I 77 15 28 70 9 15 27 42 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT L 78 L 78 15 28 70 9 17 35 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT Q 79 Q 79 15 28 70 8 19 35 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT A 80 A 80 15 28 70 8 19 37 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT L 81 L 81 19 28 70 6 17 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT D 82 D 82 19 28 70 6 23 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT I 83 I 83 19 28 70 6 17 37 44 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT N 84 N 84 19 28 70 6 16 30 43 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT D 85 D 85 19 28 70 6 16 30 43 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT R 86 R 86 19 28 70 8 23 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT G 87 G 87 19 28 70 6 17 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT N 88 N 88 19 28 70 5 30 38 44 52 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT I 89 I 89 19 28 70 11 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT T 90 T 90 19 28 70 11 29 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT Y 91 Y 91 19 28 70 11 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT T 92 T 92 19 28 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT E 93 E 93 19 28 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT F 94 F 94 19 28 70 17 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT M 95 M 95 19 28 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT A 96 A 96 19 28 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT G 97 G 97 19 28 70 16 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT C 98 C 98 19 28 70 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT Y 99 Y 99 19 28 70 11 30 38 45 53 56 59 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT R 100 R 100 4 28 70 3 4 4 31 43 48 59 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT W 101 W 101 4 28 70 3 18 30 42 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT K 102 K 102 4 27 70 3 4 4 9 40 52 60 63 66 68 68 68 68 68 68 68 68 69 69 69 LCS_GDT N 103 N 103 0 5 70 0 1 1 4 5 5 6 8 11 13 14 15 25 28 30 44 48 69 69 69 LCS_GDT I 104 I 104 0 0 70 0 0 0 0 2 3 6 6 8 11 14 15 15 15 17 17 17 18 18 23 LCS_AVERAGE LCS_A: 58.11 ( 30.33 44.00 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 18 30 38 45 53 56 60 63 66 68 68 68 68 68 68 68 68 69 69 69 GDT PERCENT_AT 25.71 42.86 54.29 64.29 75.71 80.00 85.71 90.00 94.29 97.14 97.14 97.14 97.14 97.14 97.14 97.14 97.14 98.57 98.57 98.57 GDT RMS_LOCAL 0.33 0.63 0.88 1.25 1.56 1.63 2.08 2.11 2.49 2.55 2.55 2.55 2.55 2.55 2.55 2.55 2.55 2.99 2.99 2.99 GDT RMS_ALL_AT 5.84 5.41 5.16 4.52 4.21 4.24 3.78 3.93 3.69 3.72 3.72 3.72 3.72 3.72 3.72 3.72 3.72 3.66 3.66 3.66 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA N 35 N 35 3.065 4 0.022 0.022 3.077 53.571 26.786 LGA H 36 H 36 2.593 6 0.039 0.039 2.842 60.952 24.381 LGA I 37 I 37 1.863 4 0.054 0.054 2.156 72.976 36.488 LGA K 38 K 38 2.091 5 0.027 0.027 2.104 68.810 30.582 LGA Y 39 Y 39 1.978 8 0.066 0.066 2.036 72.976 24.325 LGA I 40 I 40 1.090 4 0.022 0.022 1.504 83.810 41.905 LGA N 41 N 41 0.650 4 0.012 0.012 0.655 92.857 46.429 LGA E 42 E 42 0.340 5 0.023 0.023 0.511 97.619 43.386 LGA L 43 L 43 0.852 4 0.042 0.042 1.246 88.214 44.107 LGA F 44 F 44 1.003 7 0.026 0.026 1.601 81.548 29.654 LGA Y 45 Y 45 1.293 8 0.051 0.051 1.686 79.286 26.429 LGA K 46 K 46 1.597 5 0.023 0.023 1.883 75.000 33.333 LGA L 47 L 47 1.472 4 0.066 0.066 1.522 79.286 39.643 LGA D 48 D 48 1.445 4 0.028 0.028 1.469 81.429 40.714 LGA T 49 T 49 1.450 3 0.049 0.049 1.705 77.143 44.082 LGA N 50 N 50 1.420 4 0.023 0.023 1.420 81.429 40.714 LGA H 51 H 51 1.189 6 0.130 0.130 1.662 79.286 31.714 LGA N 52 N 52 1.352 4 0.069 0.069 1.352 81.429 40.714 LGA G 53 G 53 1.685 0 0.017 0.017 1.934 72.857 72.857 LGA S 54 S 54 1.856 2 0.078 0.078 1.856 72.857 48.571 LGA L 55 L 55 1.718 4 0.029 0.029 1.838 72.857 36.429 LGA S 56 S 56 1.659 2 0.022 0.022 1.923 72.857 48.571 LGA H 57 H 57 1.975 6 0.042 0.042 2.157 70.833 28.333 LGA R 58 R 58 1.314 7 0.024 0.024 1.475 81.429 29.610 LGA E 59 E 59 1.198 5 0.021 0.021 1.432 81.429 36.190 LGA I 60 I 60 1.752 4 0.011 0.011 1.789 72.857 36.429 LGA Y 61 Y 61 2.234 8 0.066 0.066 2.380 66.786 22.262 LGA T 62 T 62 1.567 3 0.076 0.076 1.591 77.143 44.082 LGA V 63 V 63 0.897 3 0.022 0.022 1.394 83.690 47.823 LGA L 64 L 64 2.476 4 0.027 0.027 2.917 62.976 31.488 LGA A 65 A 65 3.284 1 0.039 0.039 3.610 50.119 40.095 LGA S 66 S 66 2.457 2 0.092 0.092 2.599 62.857 41.905 LGA V 67 V 67 1.886 3 0.032 0.032 2.707 62.976 35.986 LGA G 68 G 68 4.194 0 0.095 0.095 5.031 36.190 36.190 LGA I 69 I 69 6.697 4 0.050 0.050 6.845 13.333 6.667 LGA K 70 K 70 7.204 5 0.042 0.042 7.204 13.452 5.979 LGA K 71 K 71 6.546 5 0.033 0.033 6.888 16.310 7.249 LGA W 72 W 72 6.370 10 0.018 0.018 6.633 19.524 5.578 LGA D 73 D 73 5.028 4 0.024 0.024 5.632 32.024 16.012 LGA I 74 I 74 3.991 4 0.024 0.024 4.555 43.810 21.905 LGA N 75 N 75 3.898 4 0.041 0.041 4.061 46.905 23.452 LGA R 76 R 76 3.100 7 0.044 0.044 3.496 59.405 21.602 LGA I 77 I 77 1.932 4 0.021 0.021 2.411 77.381 38.690 LGA L 78 L 78 1.329 4 0.029 0.029 1.680 79.286 39.643 LGA Q 79 Q 79 1.311 5 0.094 0.094 1.330 83.690 37.196 LGA A 80 A 80 0.992 1 0.096 0.096 2.090 81.786 65.429 LGA L 81 L 81 2.057 4 0.237 0.237 2.057 72.976 36.488 LGA D 82 D 82 1.925 4 0.032 0.032 2.372 66.786 33.393 LGA I 83 I 83 2.377 4 0.029 0.029 2.732 62.857 31.429 LGA N 84 N 84 2.447 4 0.029 0.029 2.517 62.857 31.429 LGA D 85 D 85 2.462 4 0.207 0.207 2.462 68.810 34.405 LGA R 86 R 86 1.009 7 0.042 0.042 1.568 79.286 28.831 LGA G 87 G 87 2.520 0 0.048 0.048 3.659 57.619 57.619 LGA N 88 N 88 2.944 4 0.138 0.138 2.944 60.952 30.476 LGA I 89 I 89 2.022 4 0.075 0.075 2.324 68.810 34.405 LGA T 90 T 90 1.337 3 0.052 0.052 1.350 85.952 49.116 LGA Y 91 Y 91 0.747 8 0.024 0.024 0.852 95.238 31.746 LGA T 92 T 92 0.213 3 0.018 0.018 0.509 97.619 55.782 LGA E 93 E 93 0.662 5 0.046 0.046 1.240 90.595 40.265 LGA F 94 F 94 1.277 7 0.043 0.043 1.581 81.548 29.654 LGA M 95 M 95 1.319 4 0.058 0.058 1.392 81.429 40.714 LGA A 96 A 96 1.335 1 0.055 0.055 1.640 79.286 63.429 LGA G 97 G 97 1.565 0 0.144 0.144 2.556 71.071 71.071 LGA C 98 C 98 2.028 2 0.029 0.029 2.500 64.881 43.254 LGA Y 99 Y 99 2.224 8 0.654 0.654 3.361 61.071 20.357 LGA R 100 R 100 3.876 7 0.135 0.135 3.876 52.024 18.918 LGA W 101 W 101 2.044 10 0.637 0.637 4.558 54.762 15.646 LGA K 102 K 102 5.140 5 0.120 0.120 7.379 24.048 10.688 LGA N 103 N 103 14.615 4 0.175 0.175 18.242 0.000 0.000 LGA I 104 I 104 19.543 4 0.573 0.573 22.510 0.000 0.000 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 70 280 280 100.00 583 280 48.03 70 SUMMARY(RMSD_GDC): 3.626 3.697 3.697 65.939 34.010 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 70 70 4.0 63 2.11 73.571 70.461 2.852 LGA_LOCAL RMSD: 2.109 Number of atoms: 63 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 3.932 Number of assigned atoms: 70 Std_ASGN_ATOMS RMSD: 3.626 Standard rmsd on all 70 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.384904 * X + -0.514844 * Y + -0.766019 * Z + -15.673337 Y_new = 0.791240 * X + 0.243229 * Y + -0.561052 * Z + -48.816429 Z_new = 0.475172 * X + -0.822056 * Y + 0.313746 * Z + 27.648903 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.023550 -0.495159 -1.206200 [DEG: 115.9409 -28.3705 -69.1101 ] ZXZ: -0.938638 1.251661 2.617485 [DEG: -53.7800 71.7149 149.9709 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0521AL285_1-D2 REMARK 2: T0521-D2.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0521AL285_1-D2.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 70 70 4.0 63 2.11 70.461 3.63 REMARK ---------------------------------------------------------- MOLECULE T0521AL285_1-D2 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 2o5gA ATOM 17 N ASN 35 -24.375 -46.920 1.821 1.00 0.00 N ATOM 18 CA ASN 35 -24.756 -47.788 2.933 1.00 0.00 C ATOM 19 C ASN 35 -25.686 -47.082 3.918 1.00 0.00 C ATOM 20 O ASN 35 -26.680 -47.652 4.379 1.00 0.00 O ATOM 21 N HIS 36 -25.340 -45.839 4.246 1.00 0.00 N ATOM 22 CA HIS 36 -26.159 -45.076 5.172 1.00 0.00 C ATOM 23 C HIS 36 -27.550 -44.826 4.602 1.00 0.00 C ATOM 24 O HIS 36 -28.559 -44.969 5.289 1.00 0.00 O ATOM 25 N ILE 37 -27.609 -44.464 3.328 1.00 0.00 N ATOM 26 CA ILE 37 -28.885 -44.255 2.670 1.00 0.00 C ATOM 27 C ILE 37 -29.732 -45.522 2.741 1.00 0.00 C ATOM 28 O ILE 37 -30.916 -45.476 3.075 1.00 0.00 O ATOM 29 N LYS 38 -29.121 -46.678 2.477 1.00 0.00 N ATOM 30 CA LYS 38 -29.852 -47.926 2.528 1.00 0.00 C ATOM 31 C LYS 38 -30.375 -48.214 3.934 1.00 0.00 C ATOM 32 O LYS 38 -31.506 -48.683 4.116 1.00 0.00 O ATOM 33 N TYR 39 -29.584 -47.915 4.952 1.00 0.00 N ATOM 34 CA TYR 39 -30.035 -48.092 6.328 1.00 0.00 C ATOM 35 C TYR 39 -31.167 -47.122 6.649 1.00 0.00 C ATOM 36 O TYR 39 -32.122 -47.507 7.329 1.00 0.00 O ATOM 37 N ILE 40 -31.077 -45.896 6.167 1.00 0.00 N ATOM 38 CA ILE 40 -32.166 -44.954 6.410 1.00 0.00 C ATOM 39 C ILE 40 -33.442 -45.406 5.700 1.00 0.00 C ATOM 40 O ILE 40 -34.533 -45.204 6.223 1.00 0.00 O ATOM 41 N ASN 41 -33.325 -46.031 4.528 1.00 0.00 N ATOM 42 CA ASN 41 -34.483 -46.560 3.841 1.00 0.00 C ATOM 43 C ASN 41 -35.120 -47.703 4.638 1.00 0.00 C ATOM 44 O ASN 41 -36.332 -47.816 4.733 1.00 0.00 O ATOM 45 N GLU 42 -34.294 -48.568 5.220 1.00 0.00 N ATOM 46 CA GLU 42 -34.826 -49.631 6.068 1.00 0.00 C ATOM 47 C GLU 42 -35.616 -49.033 7.243 1.00 0.00 C ATOM 48 O GLU 42 -36.670 -49.534 7.595 1.00 0.00 O ATOM 49 N LEU 43 -35.087 -47.981 7.847 1.00 0.00 N ATOM 50 CA LEU 43 -35.800 -47.290 8.927 1.00 0.00 C ATOM 51 C LEU 43 -37.087 -46.639 8.426 1.00 0.00 C ATOM 52 O LEU 43 -38.121 -46.734 9.091 1.00 0.00 O ATOM 53 N PHE 44 -37.039 -45.982 7.278 1.00 0.00 N ATOM 54 CA PHE 44 -38.218 -45.399 6.668 1.00 0.00 C ATOM 55 C PHE 44 -39.326 -46.435 6.533 1.00 0.00 C ATOM 56 O PHE 44 -40.497 -46.196 6.881 1.00 0.00 O ATOM 57 N TYR 45 -38.974 -47.625 6.036 1.00 0.00 N ATOM 58 CA TYR 45 -39.919 -48.684 5.831 1.00 0.00 C ATOM 59 C TYR 45 -40.574 -49.136 7.104 1.00 0.00 C ATOM 60 O TYR 45 -41.765 -49.529 7.119 1.00 0.00 O ATOM 61 N LYS 46 -39.848 -49.080 8.221 1.00 0.00 N ATOM 62 CA LYS 46 -40.450 -49.432 9.524 1.00 0.00 C ATOM 63 C LYS 46 -41.616 -48.458 9.844 1.00 0.00 C ATOM 64 O LYS 46 -42.637 -48.886 10.374 1.00 0.00 O ATOM 65 N LEU 47 -41.451 -47.170 9.543 1.00 0.00 N ATOM 66 CA LEU 47 -42.548 -46.223 9.723 1.00 0.00 C ATOM 67 C LEU 47 -43.667 -46.407 8.709 1.00 0.00 C ATOM 68 O LEU 47 -44.850 -46.404 9.025 1.00 0.00 O ATOM 69 N ASP 48 -43.298 -46.583 7.450 1.00 0.00 N ATOM 70 CA ASP 48 -44.238 -46.664 6.339 1.00 0.00 C ATOM 71 C ASP 48 -44.820 -48.080 6.239 1.00 0.00 C ATOM 72 O ASP 48 -44.535 -48.871 5.324 1.00 0.00 O ATOM 73 N THR 49 -45.623 -48.430 7.215 1.00 0.00 N ATOM 74 CA THR 49 -46.050 -49.818 7.323 1.00 0.00 C ATOM 75 C THR 49 -46.933 -50.306 6.224 1.00 0.00 C ATOM 76 O THR 49 -46.964 -51.511 5.990 1.00 0.00 O ATOM 77 N ASN 50 -47.640 -49.427 5.523 1.00 0.00 N ATOM 78 CA ASN 50 -48.437 -49.871 4.379 1.00 0.00 C ATOM 79 C ASN 50 -47.657 -49.839 3.073 1.00 0.00 C ATOM 80 O ASN 50 -48.192 -50.185 2.024 1.00 0.00 O ATOM 81 N HIS 51 -46.385 -49.484 3.118 1.00 0.00 N ATOM 82 CA HIS 51 -45.507 -49.557 1.964 1.00 0.00 C ATOM 83 C HIS 51 -45.900 -48.619 0.838 1.00 0.00 C ATOM 84 O HIS 51 -45.518 -48.844 -0.310 1.00 0.00 O ATOM 85 N ASN 52 -46.638 -47.542 1.113 1.00 0.00 N ATOM 86 CA ASN 52 -47.090 -46.657 0.035 1.00 0.00 C ATOM 87 C ASN 52 -46.138 -45.531 -0.298 1.00 0.00 C ATOM 88 O ASN 52 -46.420 -44.733 -1.179 1.00 0.00 O ATOM 89 N GLY 53 -45.011 -45.446 0.392 1.00 0.00 N ATOM 90 CA GLY 53 -44.009 -44.448 0.103 1.00 0.00 C ATOM 91 C GLY 53 -44.101 -43.160 0.896 1.00 0.00 C ATOM 92 O GLY 53 -43.299 -42.248 0.664 1.00 0.00 O ATOM 93 N SER 54 -45.048 -43.062 1.827 1.00 0.00 N ATOM 94 CA SER 54 -45.118 -41.852 2.648 1.00 0.00 C ATOM 95 C SER 54 -45.488 -42.239 4.041 1.00 0.00 C ATOM 96 O SER 54 -46.246 -43.185 4.251 1.00 0.00 O ATOM 97 N LEU 55 -45.025 -41.478 5.008 1.00 0.00 N ATOM 98 CA LEU 55 -45.361 -41.666 6.418 1.00 0.00 C ATOM 99 C LEU 55 -46.438 -40.633 6.810 1.00 0.00 C ATOM 100 O LEU 55 -46.230 -39.415 6.721 1.00 0.00 O ATOM 101 N SER 56 -47.573 -41.153 7.230 1.00 0.00 N ATOM 102 CA SER 56 -48.702 -40.341 7.683 1.00 0.00 C ATOM 103 C SER 56 -48.598 -40.068 9.179 1.00 0.00 C ATOM 104 O SER 56 -47.826 -40.682 9.921 1.00 0.00 O ATOM 105 N HIS 57 -49.464 -39.175 9.665 1.00 0.00 N ATOM 106 CA HIS 57 -49.556 -38.972 11.105 1.00 0.00 C ATOM 107 C HIS 57 -49.949 -40.266 11.790 1.00 0.00 C ATOM 108 O HIS 57 -49.415 -40.575 12.862 1.00 0.00 O ATOM 109 N ARG 58 -50.822 -41.074 11.202 1.00 0.00 N ATOM 110 CA ARG 58 -51.230 -42.326 11.781 1.00 0.00 C ATOM 111 C ARG 58 -50.034 -43.276 11.931 1.00 0.00 C ATOM 112 O ARG 58 -49.830 -43.894 13.000 1.00 0.00 O ATOM 113 N GLU 59 -49.212 -43.375 10.887 1.00 0.00 N ATOM 114 CA GLU 59 -48.072 -44.274 10.955 1.00 0.00 C ATOM 115 C GLU 59 -47.032 -43.800 11.957 1.00 0.00 C ATOM 116 O GLU 59 -46.436 -44.622 12.658 1.00 0.00 O ATOM 117 N ILE 60 -46.784 -42.492 12.021 1.00 0.00 N ATOM 118 CA ILE 60 -45.825 -41.955 12.981 1.00 0.00 C ATOM 119 C ILE 60 -46.318 -42.190 14.415 1.00 0.00 C ATOM 120 O ILE 60 -45.554 -42.605 15.283 1.00 0.00 O ATOM 121 N TYR 61 -47.606 -41.981 14.653 1.00 0.00 N ATOM 122 CA TYR 61 -48.167 -42.187 15.974 1.00 0.00 C ATOM 123 C TYR 61 -48.021 -43.627 16.418 1.00 0.00 C ATOM 124 O TYR 61 -47.727 -43.916 17.584 1.00 0.00 O ATOM 125 N THR 62 -48.254 -44.573 15.503 1.00 0.00 N ATOM 126 CA THR 62 -48.123 -45.972 15.854 1.00 0.00 C ATOM 127 C THR 62 -46.710 -46.330 16.304 1.00 0.00 C ATOM 128 O THR 62 -46.538 -47.008 17.323 1.00 0.00 O ATOM 129 N VAL 63 -45.704 -45.893 15.571 1.00 0.00 N ATOM 130 CA VAL 63 -44.337 -46.187 15.983 1.00 0.00 C ATOM 131 C VAL 63 -44.029 -45.509 17.332 1.00 0.00 C ATOM 132 O VAL 63 -43.380 -46.114 18.179 1.00 0.00 O ATOM 133 N LEU 64 -44.456 -44.245 17.502 1.00 0.00 N ATOM 134 CA LEU 64 -44.201 -43.583 18.775 1.00 0.00 C ATOM 135 C LEU 64 -44.837 -44.327 19.936 1.00 0.00 C ATOM 136 O LEU 64 -44.189 -44.488 20.989 1.00 0.00 O ATOM 137 N ALA 65 -46.047 -44.860 19.752 1.00 0.00 N ATOM 138 CA ALA 65 -46.657 -45.622 20.841 1.00 0.00 C ATOM 139 C ALA 65 -45.908 -46.907 21.120 1.00 0.00 C ATOM 140 O ALA 65 -45.765 -47.331 22.266 1.00 0.00 O ATOM 141 N SER 66 -45.406 -47.563 20.080 1.00 0.00 N ATOM 142 CA SER 66 -44.589 -48.740 20.289 1.00 0.00 C ATOM 143 C SER 66 -43.334 -48.452 21.095 1.00 0.00 C ATOM 144 O SER 66 -42.797 -49.359 21.751 1.00 0.00 O ATOM 145 N VAL 67 -42.870 -47.218 21.049 1.00 0.00 N ATOM 146 CA VAL 67 -41.698 -46.779 21.766 1.00 0.00 C ATOM 147 C VAL 67 -42.035 -46.044 23.067 1.00 0.00 C ATOM 148 O VAL 67 -41.150 -45.493 23.724 1.00 0.00 O ATOM 149 N GLY 68 -43.297 -46.129 23.468 1.00 0.00 N ATOM 150 CA GLY 68 -43.709 -45.650 24.783 1.00 0.00 C ATOM 151 C GLY 68 -44.191 -44.214 24.882 1.00 0.00 C ATOM 152 O GLY 68 -44.278 -43.688 25.989 1.00 0.00 O ATOM 153 N ILE 69 -48.262 -39.374 21.365 1.00 0.00 N ATOM 154 CA ILE 69 -48.238 -37.987 20.894 1.00 0.00 C ATOM 155 C ILE 69 -49.623 -37.435 20.633 1.00 0.00 C ATOM 156 O ILE 69 -50.540 -38.143 20.203 1.00 0.00 O ATOM 157 N LYS 70 -49.807 -36.152 20.903 1.00 0.00 N ATOM 158 CA LYS 70 -51.055 -35.526 20.527 1.00 0.00 C ATOM 159 C LYS 70 -51.160 -35.372 19.015 1.00 0.00 C ATOM 160 O LYS 70 -50.163 -35.447 18.270 1.00 0.00 O ATOM 161 N LYS 71 -52.371 -35.159 18.540 1.00 0.00 N ATOM 162 CA LYS 71 -52.634 -34.915 17.144 1.00 0.00 C ATOM 163 C LYS 71 -51.758 -33.780 16.643 1.00 0.00 C ATOM 164 O LYS 71 -51.120 -33.868 15.594 1.00 0.00 O ATOM 165 N TRP 72 -51.789 -32.664 17.349 1.00 0.00 N ATOM 166 CA TRP 72 -51.039 -31.502 16.903 1.00 0.00 C ATOM 167 C TRP 72 -49.547 -31.717 16.939 1.00 0.00 C ATOM 168 O TRP 72 -48.852 -31.199 16.078 1.00 0.00 O ATOM 169 N ASP 73 -49.036 -32.484 17.900 1.00 0.00 N ATOM 170 CA ASP 73 -47.606 -32.792 17.911 1.00 0.00 C ATOM 171 C ASP 73 -47.235 -33.533 16.599 1.00 0.00 C ATOM 172 O ASP 73 -46.230 -33.226 15.995 1.00 0.00 O ATOM 173 N ILE 74 -48.022 -34.522 16.210 1.00 0.00 N ATOM 174 CA ILE 74 -47.708 -35.257 14.979 1.00 0.00 C ATOM 175 C ILE 74 -47.686 -34.355 13.772 1.00 0.00 C ATOM 176 O ILE 74 -46.772 -34.389 12.983 1.00 0.00 O ATOM 177 N ASN 75 -48.693 -33.477 13.649 1.00 0.00 N ATOM 178 CA ASN 75 -48.739 -32.609 12.503 1.00 0.00 C ATOM 179 C ASN 75 -47.629 -31.573 12.552 1.00 0.00 C ATOM 180 O ASN 75 -47.032 -31.270 11.525 1.00 0.00 O ATOM 181 N ARG 76 -47.384 -31.013 13.732 1.00 0.00 N ATOM 182 CA ARG 76 -46.381 -29.961 13.895 1.00 0.00 C ATOM 183 C ARG 76 -45.001 -30.552 13.556 1.00 0.00 C ATOM 184 O ARG 76 -44.194 -29.890 12.887 1.00 0.00 O ATOM 185 N ILE 77 -44.726 -31.782 14.005 1.00 0.00 N ATOM 186 CA ILE 77 -43.461 -32.442 13.683 1.00 0.00 C ATOM 187 C ILE 77 -43.311 -32.705 12.179 1.00 0.00 C ATOM 188 O ILE 77 -42.287 -32.389 11.602 1.00 0.00 O ATOM 189 N LEU 78 -44.356 -33.248 11.567 1.00 0.00 N ATOM 190 CA LEU 78 -44.312 -33.457 10.141 1.00 0.00 C ATOM 191 C LEU 78 -44.072 -32.151 9.386 1.00 0.00 C ATOM 192 O LEU 78 -43.268 -32.079 8.456 1.00 0.00 O ATOM 193 N GLN 79 -44.733 -31.096 9.810 1.00 0.00 N ATOM 194 CA GLN 79 -44.658 -29.803 9.117 1.00 0.00 C ATOM 195 C GLN 79 -43.231 -29.304 9.022 1.00 0.00 C ATOM 196 O GLN 79 -42.841 -28.706 8.031 1.00 0.00 O ATOM 197 N ALA 80 -42.431 -29.515 10.053 1.00 0.00 N ATOM 198 CA ALA 80 -41.063 -29.010 10.057 1.00 0.00 C ATOM 199 C ALA 80 -40.192 -29.643 8.970 1.00 0.00 C ATOM 200 O ALA 80 -39.211 -29.032 8.569 1.00 0.00 O ATOM 201 N LEU 81 -40.492 -30.873 8.548 1.00 0.00 N ATOM 202 CA LEU 81 -39.702 -31.579 7.537 1.00 0.00 C ATOM 203 C LEU 81 -40.426 -31.778 6.221 1.00 0.00 C ATOM 204 O LEU 81 -39.878 -32.358 5.290 1.00 0.00 O ATOM 205 N ASP 82 -41.673 -31.305 6.126 1.00 0.00 N ATOM 206 CA ASP 82 -42.533 -31.562 4.978 1.00 0.00 C ATOM 207 C ASP 82 -42.250 -30.542 3.907 1.00 0.00 C ATOM 208 O ASP 82 -43.002 -29.603 3.686 1.00 0.00 O ATOM 209 N ILE 83 -41.129 -30.724 3.235 1.00 0.00 N ATOM 210 CA ILE 83 -40.623 -29.738 2.271 1.00 0.00 C ATOM 211 C ILE 83 -41.607 -29.467 1.141 1.00 0.00 C ATOM 212 O ILE 83 -41.666 -28.324 0.651 1.00 0.00 O ATOM 213 N ASN 84 -42.368 -30.473 0.703 1.00 0.00 N ATOM 214 CA ASN 84 -43.302 -30.284 -0.410 1.00 0.00 C ATOM 215 C ASN 84 -44.704 -29.891 0.049 1.00 0.00 C ATOM 216 O ASN 84 -45.565 -29.654 -0.773 1.00 0.00 O ATOM 217 N ASP 85 -44.906 -29.761 1.351 1.00 0.00 N ATOM 218 CA ASP 85 -46.165 -29.269 1.876 1.00 0.00 C ATOM 219 C ASP 85 -47.381 -30.182 1.726 1.00 0.00 C ATOM 220 O ASP 85 -48.526 -29.724 1.903 1.00 0.00 O ATOM 221 N ARG 86 -47.186 -31.470 1.433 1.00 0.00 N ATOM 222 CA ARG 86 -48.316 -32.380 1.241 1.00 0.00 C ATOM 223 C ARG 86 -48.855 -33.063 2.499 1.00 0.00 C ATOM 224 O ARG 86 -49.813 -33.858 2.450 1.00 0.00 O ATOM 225 N GLY 87 -48.296 -32.724 3.644 1.00 0.00 N ATOM 226 CA GLY 87 -48.789 -33.225 4.909 1.00 0.00 C ATOM 227 C GLY 87 -48.239 -34.547 5.392 1.00 0.00 C ATOM 228 O GLY 87 -48.563 -34.942 6.519 1.00 0.00 O ATOM 229 N ASN 88 -47.400 -35.214 4.594 1.00 0.00 N ATOM 230 CA ASN 88 -46.831 -36.489 4.993 1.00 0.00 C ATOM 231 C ASN 88 -45.342 -36.496 4.619 1.00 0.00 C ATOM 232 O ASN 88 -44.875 -35.631 3.883 1.00 0.00 O ATOM 233 N ILE 89 -44.605 -37.475 5.140 1.00 0.00 N ATOM 234 CA ILE 89 -43.170 -37.491 4.934 1.00 0.00 C ATOM 235 C ILE 89 -42.787 -38.570 3.901 1.00 0.00 C ATOM 236 O ILE 89 -42.958 -39.785 4.159 1.00 0.00 O ATOM 237 N THR 90 -42.226 -38.171 2.771 1.00 0.00 N ATOM 238 CA THR 90 -41.690 -39.155 1.800 1.00 0.00 C ATOM 239 C THR 90 -40.222 -39.466 2.102 1.00 0.00 C ATOM 240 O THR 90 -39.628 -38.875 3.019 1.00 0.00 O ATOM 241 N TYR 91 -39.647 -40.433 1.373 1.00 0.00 N ATOM 242 CA TYR 91 -38.278 -40.808 1.689 1.00 0.00 C ATOM 243 C TYR 91 -37.308 -39.672 1.482 1.00 0.00 C ATOM 244 O TYR 91 -36.451 -39.445 2.334 1.00 0.00 O ATOM 245 N THR 92 -37.398 -38.905 0.389 1.00 0.00 N ATOM 246 CA THR 92 -36.469 -37.762 0.273 1.00 0.00 C ATOM 247 C THR 92 -36.492 -36.837 1.496 1.00 0.00 C ATOM 248 O THR 92 -35.441 -36.385 1.925 1.00 0.00 O ATOM 249 N GLU 93 -37.684 -36.547 2.029 1.00 0.00 N ATOM 250 CA GLU 93 -37.811 -35.675 3.181 1.00 0.00 C ATOM 251 C GLU 93 -37.215 -36.338 4.422 1.00 0.00 C ATOM 252 O GLU 93 -36.547 -35.713 5.231 1.00 0.00 O ATOM 253 N PHE 94 -37.462 -37.627 4.569 1.00 0.00 N ATOM 254 CA PHE 94 -36.898 -38.387 5.681 1.00 0.00 C ATOM 255 C PHE 94 -35.393 -38.445 5.637 1.00 0.00 C ATOM 256 O PHE 94 -34.729 -38.250 6.651 1.00 0.00 O ATOM 257 N MET 95 -34.864 -38.705 4.454 1.00 0.00 N ATOM 258 CA MET 95 -33.424 -38.751 4.257 1.00 0.00 C ATOM 259 C MET 95 -32.798 -37.416 4.551 1.00 0.00 C ATOM 260 O MET 95 -31.754 -37.358 5.183 1.00 0.00 O ATOM 261 N ALA 96 -33.367 -36.312 4.060 1.00 0.00 N ATOM 262 CA ALA 96 -32.823 -34.983 4.339 1.00 0.00 C ATOM 263 C ALA 96 -32.728 -34.789 5.849 1.00 0.00 C ATOM 264 O ALA 96 -31.720 -34.313 6.346 1.00 0.00 O ATOM 265 N GLY 97 -33.774 -35.197 6.583 1.00 0.00 N ATOM 266 CA GLY 97 -33.785 -35.081 8.028 1.00 0.00 C ATOM 267 C GLY 97 -32.713 -35.919 8.685 1.00 0.00 C ATOM 268 O GLY 97 -32.031 -35.456 9.593 1.00 0.00 O ATOM 269 N CYS 98 -32.568 -37.156 8.257 1.00 0.00 N ATOM 270 CA CYS 98 -31.598 -38.057 8.858 1.00 0.00 C ATOM 271 C CYS 98 -30.141 -37.713 8.483 1.00 0.00 C ATOM 272 O CYS 98 -29.241 -38.030 9.247 1.00 0.00 O ATOM 273 N TYR 99 -29.911 -37.118 7.329 1.00 0.00 N ATOM 274 CA TYR 99 -28.559 -36.813 6.858 1.00 0.00 C ATOM 275 C TYR 99 -28.039 -35.506 7.456 1.00 0.00 C ATOM 276 O TYR 99 -26.834 -35.273 7.464 1.00 0.00 O ATOM 277 N ARG 100 -28.952 -34.639 7.873 1.00 0.00 N ATOM 278 CA ARG 100 -28.648 -33.237 8.247 1.00 0.00 C ATOM 279 C ARG 100 -27.621 -33.172 9.356 1.00 0.00 C ATOM 280 O ARG 100 -27.676 -33.945 10.304 1.00 0.00 O ATOM 281 N TRP 101 -26.730 -32.187 9.256 1.00 0.00 N ATOM 282 CA TRP 101 -25.764 -31.855 10.307 1.00 0.00 C ATOM 283 C TRP 101 -26.510 -30.995 11.310 1.00 0.00 C ATOM 284 O TRP 101 -26.967 -29.892 10.981 1.00 0.00 O ATOM 285 N LYS 102 -26.630 -31.478 12.536 1.00 0.00 N ATOM 286 CA LYS 102 -27.693 -30.990 13.392 1.00 0.00 C ATOM 287 C LYS 102 -27.300 -30.445 14.754 1.00 0.00 C ATOM 288 O LYS 102 -26.159 -30.623 15.232 1.00 0.00 O ATOM 289 N ASN 103 -30.474 -32.771 18.786 1.00 0.00 N ATOM 290 CA ASN 103 -31.154 -33.939 18.189 1.00 0.00 C ATOM 291 C ASN 103 -31.993 -34.720 19.186 1.00 0.00 C ATOM 292 O ASN 103 -32.829 -35.558 18.764 1.00 0.00 O ATOM 293 N ILE 104 -31.753 -34.474 20.484 1.00 0.00 N ATOM 294 CA ILE 104 -32.437 -35.194 21.564 1.00 0.00 C ATOM 295 C ILE 104 -32.086 -36.692 21.578 1.00 0.00 C ATOM 296 O ILE 104 -32.832 -37.492 22.159 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 280 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 29.42 89.9 138 100.0 138 ARMSMC SECONDARY STRUCTURE . . 11.58 97.6 82 100.0 82 ARMSMC SURFACE . . . . . . . . 32.73 88.7 106 100.0 106 ARMSMC BURIED . . . . . . . . 13.61 93.8 32 100.0 32 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 62 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 60 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 37 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 46 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 16 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 52 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 36 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 32 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 37 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 15 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 14 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 13 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 10 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 11 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 3 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 9 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 5 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 0 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 3.63 (Number of atoms: 70) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 3.63 70 100.0 70 CRMSCA CRN = ALL/NP . . . . . 0.0518 CRMSCA SECONDARY STRUCTURE . . 2.49 41 100.0 41 CRMSCA SURFACE . . . . . . . . 3.98 54 100.0 54 CRMSCA BURIED . . . . . . . . 2.01 16 100.0 16 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 3.70 280 80.9 346 CRMSMC SECONDARY STRUCTURE . . 2.44 164 80.4 204 CRMSMC SURFACE . . . . . . . . 4.07 216 81.2 266 CRMSMC BURIED . . . . . . . . 2.02 64 80.0 80 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 303 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 259 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 189 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 233 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 70 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 3.70 280 48.0 583 CRMSALL SECONDARY STRUCTURE . . 2.44 164 46.5 353 CRMSALL SURFACE . . . . . . . . 4.07 216 48.1 449 CRMSALL BURIED . . . . . . . . 2.02 64 47.8 134 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.796 1.000 0.500 70 100.0 70 ERRCA SECONDARY STRUCTURE . . 2.275 1.000 0.500 41 100.0 41 ERRCA SURFACE . . . . . . . . 3.047 1.000 0.500 54 100.0 54 ERRCA BURIED . . . . . . . . 1.950 1.000 0.500 16 100.0 16 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.782 1.000 0.500 280 80.9 346 ERRMC SECONDARY STRUCTURE . . 2.237 1.000 0.500 164 80.4 204 ERRMC SURFACE . . . . . . . . 3.026 1.000 0.500 216 81.2 266 ERRMC BURIED . . . . . . . . 1.957 1.000 0.500 64 80.0 80 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 303 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 259 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 189 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 233 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 70 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 2.782 1.000 0.500 280 48.0 583 ERRALL SECONDARY STRUCTURE . . 2.237 1.000 0.500 164 46.5 353 ERRALL SURFACE . . . . . . . . 3.026 1.000 0.500 216 48.1 449 ERRALL BURIED . . . . . . . . 1.957 1.000 0.500 64 47.8 134 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 5 24 51 66 68 70 70 DISTCA CA (P) 7.14 34.29 72.86 94.29 97.14 70 DISTCA CA (RMS) 0.80 1.49 2.03 2.56 2.68 DISTCA ALL (N) 20 102 211 266 272 280 583 DISTALL ALL (P) 3.43 17.50 36.19 45.63 46.66 583 DISTALL ALL (RMS) 0.79 1.53 2.04 2.54 2.63 DISTALL END of the results output