####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 05/2009 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 65 ( 260), selected 61 , name T0521AL285_1-D1 # Molecule2: number of CA atoms 98 ( 794), selected 61 , name T0521-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -swap T0521AL285_1-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 59 33 - 175 4.82 5.86 LCS_AVERAGE: 58.36 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 46 107 - 152 1.95 7.00 LCS_AVERAGE: 40.38 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 107 - 133 0.92 7.58 LCS_AVERAGE: 18.75 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 61 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT S 31 S 31 3 3 4 3 3 3 3 3 3 4 4 4 4 4 4 5 6 31 33 42 45 54 55 LCS_GDT V 32 V 32 3 3 4 3 3 3 3 3 3 4 18 20 21 23 23 23 26 36 38 42 49 52 53 LCS_GDT I 33 I 33 3 3 59 3 3 3 3 3 3 4 6 7 7 23 23 23 26 31 33 33 34 45 50 LCS_GDT N 34 N 34 3 3 59 0 3 3 3 3 3 4 6 7 7 7 9 9 10 31 33 38 40 52 54 LCS_GDT T 107 T 107 27 46 59 11 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT F 108 F 108 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT L 109 L 109 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT K 110 K 110 27 46 59 7 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT A 111 A 111 27 46 59 13 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT A 112 A 112 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT F 113 F 113 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT N 114 N 114 27 46 59 11 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT K 115 K 115 27 46 59 6 23 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT I 116 I 116 27 46 59 6 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT D 117 D 117 27 46 59 13 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT K 118 K 118 27 46 59 8 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT D 119 D 119 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT E 120 E 120 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT D 121 D 121 27 46 59 15 30 42 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT G 122 G 122 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT Y 123 Y 123 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT I 124 I 124 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT S 125 S 125 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT K 126 K 126 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT S 127 S 127 27 46 59 7 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT D 128 D 128 27 46 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT I 129 I 129 27 46 59 7 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT V 130 V 130 27 46 59 7 27 36 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT S 131 S 131 27 46 59 7 27 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT L 132 L 132 27 46 59 8 27 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT V 133 V 133 27 46 59 7 18 30 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT H 134 H 134 25 46 59 7 10 26 43 49 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT D 135 D 135 20 46 59 4 4 12 27 39 49 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT K 136 K 136 4 46 59 4 4 9 14 22 33 45 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT V 137 V 137 3 46 59 0 3 3 10 21 31 43 53 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT L 138 L 138 15 46 59 3 18 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT D 139 D 139 15 46 59 3 17 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT N 140 N 140 15 46 59 10 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT N 141 N 141 15 46 59 9 29 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT D 142 D 142 15 46 59 10 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT I 143 I 143 15 46 59 10 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT D 144 D 144 15 46 59 10 23 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT N 145 N 145 15 46 59 10 23 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT F 146 F 146 15 46 59 10 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT F 147 F 147 15 46 59 9 19 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT L 148 L 148 15 46 59 9 19 37 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT S 149 S 149 15 46 59 10 23 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT V 150 V 150 15 46 59 10 28 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT H 151 H 151 15 46 59 9 18 34 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT S 152 S 152 15 46 59 3 4 13 29 41 50 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT I 153 I 153 3 26 59 3 3 5 7 15 31 43 52 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT I 166 I 166 10 26 59 9 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT S 167 S 167 10 26 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT F 168 F 168 10 26 59 11 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT Q 169 Q 169 10 26 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT E 170 E 170 10 26 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT F 171 F 171 10 26 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT K 172 K 172 10 26 59 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT D 173 D 173 10 26 59 11 30 41 47 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT Y 174 Y 174 10 26 59 8 22 39 47 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_GDT M 175 M 175 10 26 59 8 26 39 47 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 LCS_AVERAGE LCS_A: 39.17 ( 18.75 40.38 58.36 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 15 30 43 48 51 52 54 54 55 57 57 57 57 57 57 57 57 57 57 57 GDT PERCENT_AT 15.31 30.61 43.88 48.98 52.04 53.06 55.10 55.10 56.12 58.16 58.16 58.16 58.16 58.16 58.16 58.16 58.16 58.16 58.16 58.16 GDT RMS_LOCAL 0.37 0.67 1.01 1.18 1.25 1.32 1.54 1.54 1.78 2.12 2.12 2.12 2.12 2.12 2.12 2.12 2.12 2.12 2.12 2.12 GDT RMS_ALL_AT 7.80 7.54 7.11 7.03 7.14 7.09 7.05 7.05 6.94 7.00 7.00 7.00 7.00 7.00 7.00 7.00 7.00 7.00 7.00 7.00 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all LGA S 31 S 31 24.721 2 0.584 0.584 25.882 0.000 0.000 LGA V 32 V 32 26.066 3 0.564 0.564 28.869 0.000 0.000 LGA I 33 I 33 27.336 4 0.562 0.562 27.336 0.000 0.000 LGA N 34 N 34 26.839 4 0.081 0.081 27.499 0.000 0.000 LGA T 107 T 107 0.659 3 0.619 0.619 3.158 80.357 45.918 LGA F 108 F 108 1.035 7 0.032 0.032 1.035 88.214 32.078 LGA L 109 L 109 0.864 4 0.047 0.047 0.939 90.476 45.238 LGA K 110 K 110 0.603 5 0.029 0.029 0.603 90.476 40.212 LGA A 111 A 111 0.535 1 0.030 0.030 0.808 92.857 74.286 LGA A 112 A 112 0.774 1 0.075 0.075 0.774 90.476 72.381 LGA F 113 F 113 0.538 7 0.074 0.074 0.670 95.238 34.632 LGA N 114 N 114 0.928 4 0.059 0.059 1.003 88.214 44.107 LGA K 115 K 115 1.553 5 0.056 0.056 1.734 77.143 34.286 LGA I 116 I 116 1.105 4 0.106 0.106 1.105 81.429 40.714 LGA D 117 D 117 0.849 4 0.100 0.100 1.263 85.952 42.976 LGA K 118 K 118 1.072 5 0.056 0.056 1.342 83.690 37.196 LGA D 119 D 119 1.334 4 0.063 0.063 1.348 81.429 40.714 LGA E 120 E 120 1.478 5 0.104 0.104 1.913 77.143 34.286 LGA D 121 D 121 1.673 4 0.026 0.026 1.752 72.857 36.429 LGA G 122 G 122 1.530 0 0.051 0.051 1.530 77.143 77.143 LGA Y 123 Y 123 1.218 8 0.037 0.037 1.295 85.952 28.651 LGA I 124 I 124 0.754 4 0.041 0.041 0.960 90.476 45.238 LGA S 125 S 125 0.890 2 0.040 0.040 0.890 90.476 60.317 LGA K 126 K 126 1.051 5 0.027 0.027 1.051 85.952 38.201 LGA S 127 S 127 1.114 2 0.066 0.066 1.127 83.690 55.794 LGA D 128 D 128 0.401 4 0.046 0.046 0.657 97.619 48.810 LGA I 129 I 129 0.866 4 0.034 0.034 1.562 86.190 43.095 LGA V 130 V 130 1.773 3 0.021 0.021 1.933 75.000 42.857 LGA S 131 S 131 1.114 2 0.027 0.027 1.226 81.429 54.286 LGA L 132 L 132 1.238 4 0.030 0.030 1.563 79.286 39.643 LGA V 133 V 133 2.520 3 0.290 0.290 3.964 55.595 31.769 LGA H 134 H 134 2.908 6 0.089 0.089 4.425 52.262 20.905 LGA D 135 D 135 4.451 4 0.285 0.285 5.472 34.881 17.440 LGA K 136 K 136 6.583 5 0.689 0.689 8.499 12.381 5.503 LGA V 137 V 137 7.124 3 0.157 0.157 7.417 11.667 6.667 LGA L 138 L 138 1.485 4 0.035 0.035 1.876 77.143 38.571 LGA D 139 D 139 1.515 4 0.109 0.109 1.515 81.548 40.774 LGA N 140 N 140 0.780 4 0.077 0.077 0.919 90.476 45.238 LGA N 141 N 141 1.131 4 0.063 0.063 1.131 85.952 42.976 LGA D 142 D 142 0.970 4 0.027 0.027 0.985 90.476 45.238 LGA I 143 I 143 0.558 4 0.016 0.016 0.817 90.476 45.238 LGA D 144 D 144 1.125 4 0.035 0.035 1.271 83.690 41.845 LGA N 145 N 145 1.319 4 0.030 0.030 1.319 81.429 40.714 LGA F 146 F 146 0.607 7 0.014 0.014 0.826 90.476 32.900 LGA F 147 F 147 1.250 7 0.068 0.068 1.396 83.690 30.433 LGA L 148 L 148 1.897 4 0.020 0.020 1.913 72.857 36.429 LGA S 149 S 149 1.463 2 0.072 0.072 1.485 81.429 54.286 LGA V 150 V 150 0.796 3 0.097 0.097 1.675 83.810 47.891 LGA H 151 H 151 2.114 6 0.351 0.351 2.485 66.786 26.714 LGA S 152 S 152 4.034 2 0.231 0.231 5.912 32.024 21.349 LGA I 153 I 153 7.071 4 0.403 0.403 7.807 13.333 6.667 LGA I 166 I 166 1.273 4 0.081 0.081 1.526 79.286 39.643 LGA S 167 S 167 1.062 2 0.064 0.064 1.133 85.952 57.302 LGA F 168 F 168 0.677 7 0.060 0.060 0.850 90.476 32.900 LGA Q 169 Q 169 0.940 5 0.057 0.057 1.104 85.952 38.201 LGA E 170 E 170 1.157 5 0.047 0.047 1.232 81.429 36.190 LGA F 171 F 171 0.948 7 0.048 0.048 1.224 88.214 32.078 LGA K 172 K 172 0.906 5 0.013 0.013 1.492 85.952 38.201 LGA D 173 D 173 2.101 4 0.028 0.028 2.619 64.881 32.440 LGA Y 174 Y 174 2.499 8 0.092 0.092 3.189 59.167 19.722 LGA M 175 M 175 2.196 4 0.229 0.229 3.434 61.190 30.595 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all NUMBER_OF_ATOMS_AA: 61 244 244 100.00 496 244 49.19 98 SUMMARY(RMSD_GDC): 5.664 5.697 5.697 44.531 22.717 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 65 98 4.0 54 1.54 48.214 48.683 3.291 LGA_LOCAL RMSD: 1.541 Number of atoms: 54 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.048 Number of assigned atoms: 61 Std_ASGN_ATOMS RMSD: 5.664 Standard rmsd on all 61 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.735812 * X + -0.364048 * Y + 0.571008 * Z + -5.410965 Y_new = 0.207938 * X + -0.923934 * Y + -0.321104 * Z + -21.485155 Z_new = 0.644471 * X + -0.117538 * Y + 0.755541 * Z + -10.745662 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.866177 -0.700331 -0.154331 [DEG: 164.2198 -40.1260 -8.8425 ] ZXZ: 1.058524 0.714317 1.751192 [DEG: 60.6489 40.9273 100.3359 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0521AL285_1-D1 REMARK 2: T0521-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -swap T0521AL285_1-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 65 98 4.0 54 1.54 48.683 5.66 REMARK ---------------------------------------------------------- MOLECULE T0521AL285_1-D1 REMARK This file has been preprocessed by preprocess_pdbv2.1.00.100503REMARK Aligment from pdb entry: 2o5gA ATOM 1 N SER 31 -19.126 -39.228 -21.322 1.00 0.00 N ATOM 2 CA SER 31 -19.511 -40.624 -21.400 1.00 0.00 C ATOM 3 C SER 31 -18.455 -41.563 -20.830 1.00 0.00 C ATOM 4 O SER 31 -17.279 -41.221 -20.749 1.00 0.00 O ATOM 5 N VAL 32 -18.903 -42.758 -20.452 1.00 0.00 N ATOM 6 CA VAL 32 -18.055 -43.771 -19.888 1.00 0.00 C ATOM 7 C VAL 32 -17.064 -44.289 -20.919 1.00 0.00 C ATOM 8 O VAL 32 -17.466 -44.666 -21.998 1.00 0.00 O ATOM 9 N ILE 33 -15.778 -44.294 -20.563 1.00 0.00 N ATOM 10 CA ILE 33 -14.750 -44.797 -21.444 1.00 0.00 C ATOM 11 C ILE 33 -14.088 -46.042 -20.872 1.00 0.00 C ATOM 12 O ILE 33 -14.150 -46.304 -19.671 1.00 0.00 O ATOM 13 N ASN 34 -13.378 -46.775 -21.728 1.00 0.00 N ATOM 14 CA ASN 34 -12.603 -47.945 -21.292 1.00 0.00 C ATOM 15 C ASN 34 -11.544 -47.555 -20.280 1.00 0.00 C ATOM 16 O ASN 34 -11.326 -48.250 -19.268 1.00 0.00 O ATOM 305 N THR 107 -16.518 -32.227 0.296 1.00 0.00 N ATOM 306 CA THR 107 -16.427 -32.357 1.741 1.00 0.00 C ATOM 307 C THR 107 -15.619 -33.602 2.151 1.00 0.00 C ATOM 308 O THR 107 -14.853 -33.603 3.115 1.00 0.00 O ATOM 309 N PHE 108 -15.775 -34.680 1.402 1.00 0.00 N ATOM 310 CA PHE 108 -15.030 -35.897 1.666 1.00 0.00 C ATOM 311 C PHE 108 -13.530 -35.683 1.407 1.00 0.00 C ATOM 312 O PHE 108 -12.681 -36.244 2.109 1.00 0.00 O ATOM 313 N LEU 109 -13.210 -34.903 0.377 1.00 0.00 N ATOM 314 CA LEU 109 -11.804 -34.590 0.100 1.00 0.00 C ATOM 315 C LEU 109 -11.204 -33.732 1.225 1.00 0.00 C ATOM 316 O LEU 109 -10.099 -33.991 1.711 1.00 0.00 O ATOM 317 N LYS 110 -11.958 -32.739 1.666 1.00 0.00 N ATOM 318 CA LYS 110 -11.560 -31.894 2.754 1.00 0.00 C ATOM 319 C LYS 110 -11.268 -32.752 4.009 1.00 0.00 C ATOM 320 O LYS 110 -10.224 -32.597 4.692 1.00 0.00 O ATOM 321 N ALA 111 -12.165 -33.683 4.314 1.00 0.00 N ATOM 322 CA ALA 111 -11.987 -34.533 5.464 1.00 0.00 C ATOM 323 C ALA 111 -10.804 -35.467 5.295 1.00 0.00 C ATOM 324 O ALA 111 -10.017 -35.660 6.236 1.00 0.00 O ATOM 325 N ALA 112 -10.644 -36.043 4.109 1.00 0.00 N ATOM 326 CA ALA 112 -9.571 -36.973 3.873 1.00 0.00 C ATOM 327 C ALA 112 -8.193 -36.334 4.061 1.00 0.00 C ATOM 328 O ALA 112 -7.266 -36.992 4.502 1.00 0.00 O ATOM 329 N PHE 113 -8.069 -35.060 3.738 1.00 0.00 N ATOM 330 CA PHE 113 -6.811 -34.356 3.926 1.00 0.00 C ATOM 331 C PHE 113 -6.272 -34.530 5.338 1.00 0.00 C ATOM 332 O PHE 113 -5.056 -34.547 5.534 1.00 0.00 O ATOM 333 N ASN 114 -7.143 -34.640 6.338 1.00 0.00 N ATOM 334 CA ASN 114 -6.711 -34.718 7.719 1.00 0.00 C ATOM 335 C ASN 114 -5.830 -35.917 8.030 1.00 0.00 C ATOM 336 O ASN 114 -4.998 -35.808 8.919 1.00 0.00 O ATOM 337 N LYS 115 -6.031 -37.081 7.388 1.00 0.00 N ATOM 338 CA LYS 115 -5.132 -38.209 7.635 1.00 0.00 C ATOM 339 C LYS 115 -3.811 -38.058 6.951 1.00 0.00 C ATOM 340 O LYS 115 -2.810 -38.620 7.415 1.00 0.00 O ATOM 341 N ILE 116 -3.771 -37.316 5.865 1.00 0.00 N ATOM 342 CA ILE 116 -2.514 -37.011 5.230 1.00 0.00 C ATOM 343 C ILE 116 -1.737 -35.991 6.082 1.00 0.00 C ATOM 344 O ILE 116 -0.601 -36.240 6.483 1.00 0.00 O ATOM 345 N ASP 117 -2.392 -34.889 6.433 1.00 0.00 N ATOM 346 CA ASP 117 -1.782 -33.824 7.199 1.00 0.00 C ATOM 347 C ASP 117 -1.887 -34.083 8.690 1.00 0.00 C ATOM 348 O ASP 117 -2.555 -33.353 9.436 1.00 0.00 O ATOM 349 N LYS 118 -1.198 -35.106 9.148 1.00 0.00 N ATOM 350 CA LYS 118 -1.318 -35.580 10.520 1.00 0.00 C ATOM 351 C LYS 118 -0.864 -34.544 11.541 1.00 0.00 C ATOM 352 O LYS 118 -1.452 -34.495 12.644 1.00 0.00 O ATOM 353 N ASP 119 0.140 -33.732 11.246 1.00 0.00 N ATOM 354 CA ASP 119 0.553 -32.676 12.157 1.00 0.00 C ATOM 355 C ASP 119 -0.241 -31.412 12.012 1.00 0.00 C ATOM 356 O ASP 119 0.024 -30.458 12.744 1.00 0.00 O ATOM 357 N GLU 120 -1.240 -31.365 11.144 1.00 0.00 N ATOM 358 CA GLU 120 -2.111 -30.209 11.054 1.00 0.00 C ATOM 359 C GLU 120 -1.453 -28.947 10.557 1.00 0.00 C ATOM 360 O GLU 120 -2.053 -27.887 10.748 1.00 0.00 O ATOM 361 N ASP 121 -0.280 -28.993 9.921 1.00 0.00 N ATOM 362 CA ASP 121 0.389 -27.787 9.474 1.00 0.00 C ATOM 363 C ASP 121 -0.059 -27.272 8.126 1.00 0.00 C ATOM 364 O ASP 121 0.443 -26.222 7.700 1.00 0.00 O ATOM 365 N GLY 122 -1.020 -27.915 7.496 1.00 0.00 N ATOM 366 CA GLY 122 -1.505 -27.496 6.206 1.00 0.00 C ATOM 367 C GLY 122 -0.765 -28.029 5.012 1.00 0.00 C ATOM 368 O GLY 122 -1.165 -27.707 3.898 1.00 0.00 O ATOM 369 N TYR 123 0.278 -28.810 5.224 1.00 0.00 N ATOM 370 CA TYR 123 1.045 -29.348 4.120 1.00 0.00 C ATOM 371 C TYR 123 1.201 -30.841 4.312 1.00 0.00 C ATOM 372 O TYR 123 1.355 -31.330 5.425 1.00 0.00 O ATOM 373 N ILE 124 1.224 -31.598 3.214 1.00 0.00 N ATOM 374 CA ILE 124 1.505 -33.024 3.240 1.00 0.00 C ATOM 375 C ILE 124 2.961 -33.236 2.921 1.00 0.00 C ATOM 376 O ILE 124 3.406 -32.954 1.816 1.00 0.00 O ATOM 377 N SER 125 3.728 -33.742 3.861 1.00 0.00 N ATOM 378 CA SER 125 5.139 -34.099 3.649 1.00 0.00 C ATOM 379 C SER 125 5.256 -35.440 2.923 1.00 0.00 C ATOM 380 O SER 125 4.318 -36.238 2.897 1.00 0.00 O ATOM 381 N LYS 126 6.469 -35.755 2.476 1.00 0.00 N ATOM 382 CA LYS 126 6.762 -37.098 1.971 1.00 0.00 C ATOM 383 C LYS 126 6.478 -38.174 2.983 1.00 0.00 C ATOM 384 O LYS 126 5.856 -39.171 2.659 1.00 0.00 O ATOM 385 N SER 127 6.912 -37.985 4.235 1.00 0.00 N ATOM 386 CA SER 127 6.649 -38.975 5.262 1.00 0.00 C ATOM 387 C SER 127 5.163 -39.153 5.489 1.00 0.00 C ATOM 388 O SER 127 4.696 -40.263 5.664 1.00 0.00 O ATOM 389 N ASP 128 4.410 -38.049 5.536 1.00 0.00 N ATOM 390 CA ASP 128 2.990 -38.119 5.744 1.00 0.00 C ATOM 391 C ASP 128 2.299 -38.879 4.628 1.00 0.00 C ATOM 392 O ASP 128 1.399 -39.686 4.877 1.00 0.00 O ATOM 393 N ILE 129 2.694 -38.615 3.386 1.00 0.00 N ATOM 394 CA ILE 129 2.097 -39.296 2.246 1.00 0.00 C ATOM 395 C ILE 129 2.408 -40.792 2.303 1.00 0.00 C ATOM 396 O ILE 129 1.529 -41.637 2.122 1.00 0.00 O ATOM 397 N VAL 130 3.666 -41.107 2.565 1.00 0.00 N ATOM 398 CA VAL 130 4.099 -42.500 2.641 1.00 0.00 C ATOM 399 C VAL 130 3.262 -43.249 3.700 1.00 0.00 C ATOM 400 O VAL 130 2.863 -44.395 3.496 1.00 0.00 O ATOM 401 N SER 131 3.005 -42.604 4.827 1.00 0.00 N ATOM 402 CA SER 131 2.249 -43.263 5.891 1.00 0.00 C ATOM 403 C SER 131 0.813 -43.606 5.499 1.00 0.00 C ATOM 404 O SER 131 0.380 -44.730 5.722 1.00 0.00 O ATOM 405 N LEU 132 0.090 -42.689 4.879 1.00 0.00 N ATOM 406 CA LEU 132 -1.265 -43.008 4.453 1.00 0.00 C ATOM 407 C LEU 132 -1.256 -44.049 3.352 1.00 0.00 C ATOM 408 O LEU 132 -2.047 -44.965 3.364 1.00 0.00 O ATOM 409 N VAL 133 -0.322 -43.911 2.411 1.00 0.00 N ATOM 410 CA VAL 133 -0.292 -44.882 1.322 1.00 0.00 C ATOM 411 C VAL 133 -0.023 -46.291 1.818 1.00 0.00 C ATOM 412 O VAL 133 -0.619 -47.235 1.328 1.00 0.00 O ATOM 413 N HIS 134 0.843 -46.425 2.802 1.00 0.00 N ATOM 414 CA HIS 134 1.066 -47.742 3.422 1.00 0.00 C ATOM 415 C HIS 134 -0.216 -48.269 4.010 1.00 0.00 C ATOM 416 O HIS 134 -0.519 -49.446 3.869 1.00 0.00 O ATOM 417 N ASP 135 -0.982 -47.417 4.694 1.00 0.00 N ATOM 418 CA ASP 135 -2.279 -47.872 5.240 1.00 0.00 C ATOM 419 C ASP 135 -3.283 -48.319 4.182 1.00 0.00 C ATOM 420 O ASP 135 -4.091 -49.233 4.430 1.00 0.00 O ATOM 421 N LYS 136 -3.277 -47.660 3.033 1.00 0.00 N ATOM 422 CA LYS 136 -4.106 -48.029 1.909 1.00 0.00 C ATOM 423 C LYS 136 -3.617 -49.269 1.167 1.00 0.00 C ATOM 424 O LYS 136 -4.296 -49.720 0.261 1.00 0.00 O ATOM 425 N VAL 137 -2.459 -49.809 1.543 1.00 0.00 N ATOM 426 CA VAL 137 -1.979 -51.068 0.996 1.00 0.00 C ATOM 427 C VAL 137 -0.839 -50.922 0.020 1.00 0.00 C ATOM 428 O VAL 137 -0.547 -51.806 -0.771 1.00 0.00 O ATOM 429 N LEU 138 5.224 -48.151 -1.353 1.00 0.00 N ATOM 430 CA LEU 138 5.825 -47.260 -2.364 1.00 0.00 C ATOM 431 C LEU 138 7.274 -47.022 -2.176 1.00 0.00 C ATOM 432 O LEU 138 7.759 -46.921 -1.064 1.00 0.00 O ATOM 433 N ASP 139 7.965 -46.886 -3.292 1.00 0.00 N ATOM 434 CA ASP 139 9.381 -46.592 -3.260 1.00 0.00 C ATOM 435 C ASP 139 9.631 -45.132 -2.946 1.00 0.00 C ATOM 436 O ASP 139 8.731 -44.308 -3.049 1.00 0.00 O ATOM 437 N ASN 140 10.880 -44.800 -2.608 1.00 0.00 N ATOM 438 CA ASN 140 11.219 -43.422 -2.388 1.00 0.00 C ATOM 439 C ASN 140 10.958 -42.595 -3.647 1.00 0.00 C ATOM 440 O ASN 140 10.501 -41.441 -3.584 1.00 0.00 O ATOM 441 N ASN 141 11.296 -43.150 -4.816 1.00 0.00 N ATOM 442 CA ASN 141 11.081 -42.427 -6.053 1.00 0.00 C ATOM 443 C ASN 141 9.618 -42.133 -6.298 1.00 0.00 C ATOM 444 O ASN 141 9.283 -41.057 -6.770 1.00 0.00 O ATOM 445 N ASP 142 8.749 -43.088 -5.990 1.00 0.00 N ATOM 446 CA ASP 142 7.331 -42.862 -6.183 1.00 0.00 C ATOM 447 C ASP 142 6.780 -41.831 -5.225 1.00 0.00 C ATOM 448 O ASP 142 5.978 -41.010 -5.630 1.00 0.00 O ATOM 449 N ILE 143 7.172 -41.891 -3.943 1.00 0.00 N ATOM 450 CA ILE 143 6.719 -40.869 -3.002 1.00 0.00 C ATOM 451 C ILE 143 7.178 -39.498 -3.468 1.00 0.00 C ATOM 452 O ILE 143 6.400 -38.543 -3.497 1.00 0.00 O ATOM 453 N ASP 144 8.465 -39.378 -3.816 1.00 0.00 N ATOM 454 CA ASP 144 8.987 -38.114 -4.224 1.00 0.00 C ATOM 455 C ASP 144 8.296 -37.621 -5.484 1.00 0.00 C ATOM 456 O ASP 144 8.008 -36.414 -5.613 1.00 0.00 O ATOM 457 N ASN 145 8.030 -38.509 -6.428 1.00 0.00 N ATOM 458 CA ASN 145 7.331 -38.122 -7.648 1.00 0.00 C ATOM 459 C ASN 145 5.889 -37.678 -7.354 1.00 0.00 C ATOM 460 O ASN 145 5.397 -36.707 -7.912 1.00 0.00 O ATOM 461 N PHE 146 5.199 -38.374 -6.462 1.00 0.00 N ATOM 462 CA PHE 146 3.834 -37.983 -6.102 1.00 0.00 C ATOM 463 C PHE 146 3.836 -36.563 -5.482 1.00 0.00 C ATOM 464 O PHE 146 2.945 -35.765 -5.814 1.00 0.00 O ATOM 465 N PHE 147 4.794 -36.272 -4.603 1.00 0.00 N ATOM 466 CA PHE 147 4.898 -34.942 -3.994 1.00 0.00 C ATOM 467 C PHE 147 5.162 -33.897 -5.078 1.00 0.00 C ATOM 468 O PHE 147 4.501 -32.863 -5.142 1.00 0.00 O ATOM 469 N LEU 148 6.147 -34.167 -5.927 1.00 0.00 N ATOM 470 CA LEU 148 6.553 -33.191 -6.924 1.00 0.00 C ATOM 471 C LEU 148 5.386 -32.906 -7.885 1.00 0.00 C ATOM 472 O LEU 148 5.122 -31.762 -8.246 1.00 0.00 O ATOM 473 N SER 149 4.694 -33.938 -8.343 1.00 0.00 N ATOM 474 CA SER 149 3.561 -33.740 -9.220 1.00 0.00 C ATOM 475 C SER 149 2.440 -32.903 -8.610 1.00 0.00 C ATOM 476 O SER 149 1.811 -32.093 -9.304 1.00 0.00 O ATOM 477 N VAL 150 2.165 -33.116 -7.334 1.00 0.00 N ATOM 478 CA VAL 150 1.121 -32.348 -6.663 1.00 0.00 C ATOM 479 C VAL 150 1.541 -30.895 -6.431 1.00 0.00 C ATOM 480 O VAL 150 0.672 -30.018 -6.332 1.00 0.00 O ATOM 481 N HIS 151 2.844 -30.649 -6.320 1.00 0.00 N ATOM 482 CA HIS 151 3.394 -29.355 -5.928 1.00 0.00 C ATOM 483 C HIS 151 3.404 -28.401 -7.106 1.00 0.00 C ATOM 484 O HIS 151 4.453 -27.971 -7.557 1.00 0.00 O ATOM 485 N SER 152 2.225 -28.047 -7.585 1.00 0.00 N ATOM 486 CA SER 152 2.188 -27.240 -8.788 1.00 0.00 C ATOM 487 C SER 152 2.644 -25.809 -8.553 1.00 0.00 C ATOM 488 O SER 152 3.064 -25.175 -9.511 1.00 0.00 O ATOM 489 N ILE 153 2.584 -25.283 -7.333 1.00 0.00 N ATOM 490 CA ILE 153 3.115 -23.942 -7.104 1.00 0.00 C ATOM 491 C ILE 153 4.640 -23.920 -6.896 1.00 0.00 C ATOM 492 O ILE 153 5.226 -22.824 -6.842 1.00 0.00 O ATOM 493 N LYS 154 5.280 -25.079 -6.811 1.00 0.00 N ATOM 494 CA LYS 154 6.735 -25.161 -6.846 1.00 0.00 C ATOM 495 C LYS 154 7.430 -24.704 -5.589 1.00 0.00 C ATOM 496 O LYS 154 8.653 -24.449 -5.604 1.00 0.00 O ATOM 497 N LYS 155 6.709 -24.610 -4.483 1.00 0.00 N ATOM 498 CA LYS 155 7.315 -24.128 -3.231 1.00 0.00 C ATOM 499 C LYS 155 7.956 -25.245 -2.416 1.00 0.00 C ATOM 500 O LYS 155 8.504 -24.973 -1.327 1.00 0.00 O ATOM 501 N GLY 156 7.954 -26.460 -2.971 1.00 0.00 N ATOM 502 CA GLY 156 8.612 -27.623 -2.383 1.00 0.00 C ATOM 503 C GLY 156 7.678 -28.459 -1.545 1.00 0.00 C ATOM 504 O GLY 156 7.994 -29.609 -1.157 1.00 0.00 O ATOM 505 N ILE 157 6.513 -27.879 -1.226 1.00 0.00 N ATOM 506 CA ILE 157 5.544 -28.532 -0.345 1.00 0.00 C ATOM 507 C ILE 157 4.177 -28.776 -1.016 1.00 0.00 C ATOM 508 O ILE 157 3.851 -28.235 -2.020 1.00 0.00 O ATOM 509 N ILE 166 3.381 -29.659 -0.454 1.00 0.00 N ATOM 510 CA ILE 166 2.027 -29.952 -0.947 1.00 0.00 C ATOM 511 C ILE 166 0.865 -29.393 -0.037 1.00 0.00 C ATOM 512 O ILE 166 0.659 -29.914 1.065 1.00 0.00 O ATOM 513 N SER 167 0.142 -28.337 -0.454 1.00 0.00 N ATOM 514 CA SER 167 -0.895 -27.710 0.396 1.00 0.00 C ATOM 515 C SER 167 -2.279 -28.299 0.089 1.00 0.00 C ATOM 516 O SER 167 -2.430 -29.197 -0.727 1.00 0.00 O ATOM 517 N PHE 168 -3.291 -27.814 0.807 1.00 0.00 N ATOM 518 CA PHE 168 -4.597 -28.348 0.698 1.00 0.00 C ATOM 519 C PHE 168 -5.146 -28.182 -0.710 1.00 0.00 C ATOM 520 O PHE 168 -5.674 -29.139 -1.291 1.00 0.00 O ATOM 521 N GLN 169 -5.030 -26.981 -1.287 1.00 0.00 N ATOM 522 CA GLN 169 -5.565 -26.776 -2.612 1.00 0.00 C ATOM 523 C GLN 169 -4.866 -27.641 -3.662 1.00 0.00 C ATOM 524 O GLN 169 -5.500 -28.102 -4.610 1.00 0.00 O ATOM 525 N GLU 170 -3.574 -27.872 -3.505 1.00 0.00 N ATOM 526 CA GLU 170 -2.837 -28.764 -4.380 1.00 0.00 C ATOM 527 C GLU 170 -3.347 -30.206 -4.261 1.00 0.00 C ATOM 528 O GLU 170 -3.535 -30.907 -5.260 1.00 0.00 O ATOM 529 N PHE 171 -3.608 -30.646 -3.030 1.00 0.00 N ATOM 530 CA PHE 171 -4.195 -31.961 -2.769 1.00 0.00 C ATOM 531 C PHE 171 -5.546 -32.063 -3.467 1.00 0.00 C ATOM 532 O PHE 171 -5.837 -33.091 -4.095 1.00 0.00 O ATOM 533 N LYS 172 -6.366 -31.031 -3.343 1.00 0.00 N ATOM 534 CA LYS 172 -7.681 -31.048 -3.977 1.00 0.00 C ATOM 535 C LYS 172 -7.534 -31.316 -5.487 1.00 0.00 C ATOM 536 O LYS 172 -8.309 -32.094 -6.047 1.00 0.00 O ATOM 537 N ASP 173 -6.547 -30.684 -6.138 1.00 0.00 N ATOM 538 CA ASP 173 -6.417 -30.874 -7.587 1.00 0.00 C ATOM 539 C ASP 173 -6.038 -32.316 -7.919 1.00 0.00 C ATOM 540 O ASP 173 -6.508 -32.893 -8.901 1.00 0.00 O ATOM 541 N TYR 174 -5.172 -32.903 -7.106 1.00 0.00 N ATOM 542 CA TYR 174 -4.791 -34.295 -7.314 1.00 0.00 C ATOM 543 C TYR 174 -5.930 -35.277 -7.082 1.00 0.00 C ATOM 544 O TYR 174 -5.979 -36.315 -7.765 1.00 0.00 O ATOM 545 N MET 175 -6.874 -34.909 -6.209 1.00 0.00 N ATOM 546 CA MET 175 -7.942 -35.805 -5.735 1.00 0.00 C ATOM 547 C MET 175 -9.212 -35.657 -6.581 1.00 0.00 C ATOM 548 O MET 175 -10.235 -36.342 -6.364 1.00 0.00 O END ########################## # # # ACE results: # # # ########################## Number of atoms possible to evaluate: 244 MEASURES: ANGLES RMS : model <-> target (MC: PHI+PSI) DIHED RMS: ARMSMC PC NP PP TN ALL . . . . . . . . . . 109.48 28.6 7 3.6 194 ARMSMC SECONDARY STRUCTURE . . 128.67 20.0 5 3.9 128 ARMSMC SURFACE . . . . . . . . 109.48 28.6 7 5.3 132 ARMSMC BURIED . . . . . . . . 0.00 0.0 0 0.0 62 ARMSMC (SC: CHI1) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 92 ARMSSC1 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 86 ARMSSC1 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 61 ARMSSC1 SURFACE . . . . . . . . 0.00 0.0 0 0.0 62 ARMSSC1 BURIED . . . . . . . . 0.00 0.0 0 0.0 30 ARMSSC1 (SC: CHI2) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 74 ARMSSC2 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 51 ARMSSC2 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 52 ARMSSC2 SURFACE . . . . . . . . 0.00 0.0 0 0.0 48 ARMSSC2 BURIED . . . . . . . . 0.00 0.0 0 0.0 26 ARMSSC2 (SC: CHI3) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 29 ARMSSC3 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 26 ARMSSC3 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 20 ARMSSC3 SURFACE . . . . . . . . 0.00 0.0 0 0.0 19 ARMSSC3 BURIED . . . . . . . . 0.00 0.0 0 0.0 10 ARMSSC3 (SC: CHI4) DIHED RMS: ARMSSC PC NP PP TN ALL . . . . . . . . . . 0.00 0.0 0 0.0 10 ARMSSC4 RELIABLE SIDE CHAINS . 0.00 0.0 0 0.0 10 ARMSSC4 SECONDARY STRUCTURE . . 0.00 0.0 0 0.0 6 ARMSSC4 SURFACE . . . . . . . . 0.00 0.0 0 0.0 9 ARMSSC4 BURIED . . . . . . . . 0.00 0.0 0 0.0 1 ARMSSC4 COORDINATES RMS : model <-> target TEST (CA) RMS = 5.66 (Number of atoms: 61) (CA) RMS: CRMSCA NP PP TN ALL . . . . . . . . . . 5.66 61 62.2 98 CRMSCA CRN = ALL/NP . . . . . 0.0928 CRMSCA SECONDARY STRUCTURE . . 5.65 39 60.9 64 CRMSCA SURFACE . . . . . . . . 6.56 40 59.7 67 CRMSCA BURIED . . . . . . . . 3.35 21 67.7 31 CRMSCA (MC) RMS: CRMSMC NP PP TN ALL . . . . . . . . . . 5.70 244 49.9 489 CRMSMC SECONDARY STRUCTURE . . 5.69 156 48.8 320 CRMSMC SURFACE . . . . . . . . 6.57 160 47.9 334 CRMSMC BURIED . . . . . . . . 3.49 84 54.2 155 CRMSMC (SC) RMS: CRMSSC NP PP TN ALL . . . . . . . . . . 0.00 0 0.0 402 CRMSSC RELIABLE SIDE CHAINS . 0.00 0 0.0 334 CRMSSC SECONDARY STRUCTURE . . 0.00 0 0.0 273 CRMSSC SURFACE . . . . . . . . 0.00 0 0.0 263 CRMSSC BURIED . . . . . . . . 0.00 0 0.0 139 CRMSSC (ALL) RMS: CRMSALL NP PP TN ALL . . . . . . . . . . 5.70 244 30.7 794 CRMSALL SECONDARY STRUCTURE . . 5.69 156 29.5 529 CRMSALL SURFACE . . . . . . . . 6.57 160 30.1 531 CRMSALL BURIED . . . . . . . . 3.49 84 31.9 263 CRMSALL Accuracy of estimates of atomic coordinate errors: model <-> target (CA) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.363 1.000 0.500 61 62.2 98 ERRCA SECONDARY STRUCTURE . . 4.230 1.000 0.500 39 60.9 64 ERRCA SURFACE . . . . . . . . 5.087 1.000 0.500 40 59.7 67 ERRCA BURIED . . . . . . . . 2.983 1.000 0.500 21 67.7 31 ERRCA (MC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.378 1.000 0.500 244 49.9 489 ERRMC SECONDARY STRUCTURE . . 4.276 1.000 0.500 156 48.8 320 ERRMC SURFACE . . . . . . . . 5.061 1.000 0.500 160 47.9 334 ERRMC BURIED . . . . . . . . 3.075 1.000 0.500 84 54.2 155 ERRMC (SC) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 0.000 0.000 0.000 0 0.0 402 ERRSC RELIABLE SIDE CHAINS . 0.000 0.000 0.000 0 0.0 334 ERRSC SECONDARY STRUCTURE . . 0.000 0.000 0.000 0 0.0 273 ERRSC SURFACE . . . . . . . . 0.000 0.000 0.000 0 0.0 263 ERRSC BURIED . . . . . . . . 0.000 0.000 0.000 0 0.0 139 ERRSC (ALL) ERRORS: |D-E| |D-E|/|D+E| SR(D,E) NP PP TN ALL . . . . . . . . . . 4.378 1.000 0.500 244 30.7 794 ERRALL SECONDARY STRUCTURE . . 4.276 1.000 0.500 156 29.5 529 ERRALL SURFACE . . . . . . . . 5.061 1.000 0.500 160 30.1 531 ERRALL BURIED . . . . . . . . 3.075 1.000 0.500 84 31.9 263 ERRALL DISTANCES: Percent of total atoms where distance (target <-> model) in global superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms D < 1 D < 2 D < 3 D < 5 D < 10 NP TN CA (N) 3 12 28 40 57 61 98 DISTCA CA (P) 3.06 12.24 28.57 40.82 58.16 98 DISTCA CA (RMS) 0.92 1.51 2.12 2.64 3.99 DISTCA ALL (N) 12 45 110 172 228 244 794 DISTALL ALL (P) 1.51 5.67 13.85 21.66 28.72 794 DISTALL ALL (RMS) 0.81 1.44 2.12 2.86 4.00 DISTALL END of the results output