input/u2/rnau2-63.fa -------------------------------------------------------------------------------- UUUUUGCUGUUUGGUUAAUGA ((((((((....)))))).)) <= cst rnaeval: 1.6 mcfold: -13.62 input/u2/rnau2-a.fa -------------------------------------------------------------------------------- UCUCGGCCUUUUGGCUAAGA (((.((((....)))).))) <= cst rnaeval: -7.4 mcfold: -17.63 input/u2/rnau2-u32.fa -------------------------------------------------------------------------------- UUUUGGCUUUUUGGUUAAGA ((((((((....)))))))) <= cst rnaeval: -3.7 mcfold: -17.12