rna_ss_pred.py
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`rna_ss_pred.py` is a cmd tool that uses wrappers implemented in rna-pdb-tools.

    # DV G IIC human (lower stem, 4bp)
    rna_ss_pred.py --cyclefold --seq GUAUguaaGUAC
    GUAUguaaGUAC
    (((((..))))) -9.9541

    rna_ss_pred.py --mcfold    --seq GUAUguaaGUAC
    (((((..)))))  -9.97

    # U6-ISL human (lower stem, 4bp)
    rna_ss_pred.py --cyclefold --seq UGGCguaaGACA
    UGGCguaaGACA
    (((((..))))) -10.842

    rna_ss_pred.py --mcfold    --seq UGGCguaaGACA
    (((((..))))) -10.82
    
    # U6-ISL yeast (lower stem, 4bp)
    rna_ss_pred.py --cyclefold --seq GUUCguaaGAAC
    GUUCguaaGAAC
    (((((..))))) -12.2511

    rna_ss_pred.py --mcfold    --seq GUUCguaaGAAC
    GUUCguaaGAAC
    (((((..))))) -12.25