```
[mm] rp17_2$ git:(master) ✗ rna_align_find_seq_in_alignment.py -a pistol_noPk.sto -s hcf.fa
('Match:', 'HCF12C_58327/229-301')
ID: HCF12C_58327/229-301
Name: HCF12C_58327
Description: HCF12C_58327/229-301
Number of features: 0
/start=229
/end=301
/accession=HCF12C_58327
Per letter annotation for: secondary_structure
Seq('UGCCGUUUG-AGCGGCA-UUAAACA--GGUCU-UAAGCUCAA-AGCG-UCACCG...ACA', SingleLetterAlphabet())
UGCCGUUUGAGCGGCAUUAAACAGGUCUUAAGCUCAAAGCGUCACCGCCUACAAUGCUAGGCGGUGGGUGACA
```