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Edit Targets
Sequence Name:
T0958
Target:
Sequence(s):
>gi|87126349|gb|ABD20863.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] MNKKSKQQEKLYNFIIAKSFQQPVGSTFTYGELRKKYNVVCSTNDQREVGRRFAYWIKYTPGLPFKIVGTKNGSLLYQKIGINPCNNSTPSKGGDC
Comments:
Canceled - paper appeared online.
Subunit(s):
1
Target List Comments:
Canceled - paper appeared online.
PDB Code:
Chain:
Is Server Only:
Is CAPRI:
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Cancel target:
No
All
Humans
HumanSoft+
Cancellation date:
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Sequence summary:
Sequence TSID: 41 Target: T0958 SEQUENCE : >gi|87126349|gb|ABD20863.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] MNKKSKQQEKLYNFIIAKSFQQPVGSTFTYGELRKKYNVVCSTNDQREVGRRFAYWIKYTPGLPFKIVGTKNGSLLYQKIGINPCNNSTPSKGGDC NUMBER_OF_AA : 96 REAL_NUMBER_OF_AA : 96 SGI_CENTER : Others OLIGOMERIC_STATE : monomeric in solution BINDING_SITES : pocket for unidentified ligand ~57-67 LIGANDS : single-stranded DNA STOICHIOMETRY : A1 DISORDER : 85-96 SOLVENT : 100mM NaCitrate, pH6, 10mM MgCl2, 1.8M Li2SO4 and 14% glycerol PROTEIN_MATERIAL : YES EXPRESSION : E coli BLAST_INFO : HHSEARCH_INFO : DIFFICULTY : Other info : We identified this protein as part of our analysis of the conserved _housekeeping_ genes carried by SCCmec, the mobile genetic element that carries methicillin resistance in MRSA strains. It is encoded in the same operon as a helicase, Cch, that we also determined the structure of. We found that this protein binds ssDNA with high affinity and modest cooperativity. We determined its structure because it was only labeled _DUF1413_ in databases, and its predicted secondary structure did not match that of the OB folds that are common in ssDNA-binding proteins.
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