Control Panel: Prediction Center
Prediction Center
CASPM1
CASPTM
CASP8
CASP9
CASP 10
CASP 11
CASP 12
CASP 13
CASP 14
CASP 15
CASP 16
CASP 17
CASP COMMONS
CASP13 Menu
Home - groups
Predictors
Exper. Sequences
Targets
Structures
Predictions
Predictions Log
Evaluation System
Upload and run tasks
Tasks status
Upload results
Server status
Task details
Targets summary (SLOW!)
Queue status
TR status
Results text tables
Distribution System
Distribute
distribution.log
Logger
info.log
error.log
Meeting
Registrations
Edit Targets
Sequence Name:
T0951
Target:
Sequence(s):
>ShHTL7 GPLGSMSSIGLAHNVTILGSGETTVVLGHGYGTDQSVWKLLVPYLVDDYKVLLYDHMGAGTTNPDYFDFDRYSSLEGYSYDLIAILEEFQVSKCIYVGHSMSSMAAAVASIFRPDLFHKLVMISPTPRLINTEEYYGGFEQKVMDETLRSLDENFKSLSLGTAPLLLACDLESAAMQEYCRTLFNMRPDIACCITRMICGLDLRPYLGHVTVPCHIIQSSNDIMVPVAVGEYLRKNLGGPSVVEVMPTEGHLPHLSMPEVTIPVVLRHIRQDITDH
Comments:
Subunit(s):
1
Target List Comments:
PDB Code:
5z82
Chain:
Is Server Only:
Is CAPRI:
Release date:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
January
February
March
April
May
June
July
August
September
October
November
December
2012
2013
2014
2015
2016
2017
2018
2019
2020
2021
Today
Tomorrow
Day After Tomorrow
Next Monday
Server Expiration:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
January
February
March
April
May
June
July
August
September
October
November
December
2012
2013
2014
2015
2016
2017
2018
2019
2020
2021
Soft Expiration:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
January
February
March
April
May
June
July
August
September
October
November
December
2012
2013
2014
2015
2016
2017
2018
2019
2020
2021
Human Expiration:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
January
February
March
April
May
June
July
August
September
October
November
December
2012
2013
2014
2015
2016
2017
2018
2019
2020
2021
Cancel target:
No
All
Humans
HumanSoft+
Cancellation date:
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
January
February
March
April
May
June
July
August
September
October
November
December
2012
2013
2014
2015
2016
2017
2018
2019
2020
2021
Sequence summary:
Sequence TSID: 55 Target: T0951 SEQUENCE : >ShHTL7 GPLGSMSSIGLAHNVTILGSGETTVVLGHGYGTDQSVWKLLVPYLVDDYKVLLYDHMGAGTTNPDYFDFDRYSSLEGYSYDLIAILEEFQVSKCIYVGHSMSSMAAAVASIFRPDLFHKLVMISPTPRLINTEEYYGGFEQKVMDETLRSLDENFKSLSLGTAPLLLACDLESAAMQEYCRTLFNMRPDIACCITRMICGLDLRPYLGHVTVPCHIIQSSNDIMVPVAVGEYLRKNLGGPSVVEVMPTEGHLPHLSMPEVTIPVVLRHIRQDITDH NUMBER_OF_AA : 276 REAL_NUMBER_OF_AA : 276 SGI_CENTER : Others OLIGOMERIC_STATE : Monomer BINDING_SITES : 26;124;134;139;142;143;146;150;153;157;161;190;193;194;219 LIGANDS : Triton X-100 STOICHIOMETRY : A1 DISORDER : 1-7 SOLVENT : 1 M Lithium Sulfate, 100 mM HEPES pH 7.5 PROTEIN_MATERIAL : YES EXPRESSION : Bacterial BLAST_INFO : HHSEARCH_INFO : DIFFICULTY : Other info : Striga is a parasitic weed which affects host plants such as rice through sensitizing the presence of Stigolcatones (SLs) and recognize it through a set of 11 receptors such as ShHTL 1-11. Among ShHTL family members, ShHTL7 stands out as the receptor that binds in vitro to all SLs tested with high affinity. It is one of the receptors which recognizes the presence of host next to it and help in infesting them to get all of their nutrients. --- We have one ~60% identical protein structure bound to the triton hydrophobic tail group; this hydrophobic moiety is deeply and completely bound in the protein pocket which normally only binds to very different ligands. __Special attention: This binding also requires two helices to shift by ~2 A as compared to the closest homologue.
© Prediction Center, 2007-2024