Targets - CASP13

Control Panel: Prediction Center

Prediction Center

CASP13 Menu

Home - groups

Exper. Sequences

Predictions

Predictions Log

Evaluation System

Upload and run tasks

Tasks status

Upload results

Server status

Task details

Targets summary (SLOW!)

Queue status

Results text tables

Distribution System

distribution.log

Logger

Meeting

Registrations

Edit Targets

Sequence Name:	T1008
Target:
Sequence(s):	>UW_engnr TDELLERLRQLFEELHERGTEIVVEVHINGERDEIRVRNISKEELKKLLERIREKIEREGSSEVEVNVHSGGQTWTFNEK
Comments:	This is REAL NMR data -assisted target corresponding to T1008. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p> Zip file for the target includes four files: 1. ambiguous restraints; 2. dihedral angle restraints; 3. sequence file; 4. a README describing the sample and the nature of the restraints. <p> The guidelines on the NMR-assisted data can be found at: <br> http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf <br>and<br> http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf
Subunit(s):	1
Target List Comments:
PDB Code:
Chain:
Is Server Only:
Is CAPRI:
Release date:	Today Tomorrow Day After Tomorrow Next Monday
Server Expiration:
Soft Expiration:
Human Expiration:
Cancel target:
Cancellation date:

Sequence summary:	Sequence TSID: 106 Target: T1008 SEQUENCE : >UW_engnr TDELLERLRQLFEELHERGTEIVVEVHINGERDEIRVRNISKEELKKLLERIREKIEREGSSEVEVNVHSGGQTWTFNEK NUMBER_OF_AA : 80 REAL_NUMBER_OF_AA : 80 SGI_CENTER : Others OLIGOMERIC_STATE : likely monomer BINDING_SITES : LIGANDS : STOICHIOMETRY : A1 DISORDER : SOLVENT : PROTEIN_MATERIAL : YES EXPRESSION : BLAST_INFO : HHSEARCH_INFO : DIFFICULTY : Other info : COMMONS target C0004 suggested by Brian Koepnick, (UW, Baker Lab) Being solved by G.Montelione_s group. ===== This protein was designed from scratch by citizen scientists playing the computer game Foldit. The sequence has no significant homology to any known protein sequence. Our own in vitro characterization of this protein shows that it is monomeric and contains a significant amount of secondary structure in solution; however, its tertiary structure has not yet been determined. ===== The protein has no intended function, but we are keen to learn if this designed protein sequence folds into the intended conformation. This would demonstrate the ability of laypeople to design stable folded proteins, which has far-reaching implications for protein design, and would mark a milestone in our understanding of the protein sequence_structure relationship.

© Prediction Center, 2007-2024