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Edit Targets
Sequence Name:
T1004
Target:
Sequence(s):
>gp144-full-length MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDRPDMESLDVVLHVVPLDTSSKVVQHLYTLSTNNNQIKMLYRFVSGNSSSEWQFIQGLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTSPSHKELWTGAQSFLSTGTTKNLSDDISNYSYVEVYTTHKTTEKTKGNDNTGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPITEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP
Comments:
This refinement target corresponds to domain 2 (res. 152-228) of T1004. Starting model's GDT_HA=60 (calculated on residues belonging to the domain).
Subunit(s):
1
Target List Comments:
PDB Code:
Chain:
Is Server Only:
Is CAPRI:
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Cancel target:
No
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HumanSoft+
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Sequence summary:
Sequence TSID: 38 Target: T1004 SEQUENCE : >gp144-full-length MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDRPDMESLDVVLHVVPLDTSSKVVQHLYTLSTNNNQIKMLYRFVSGNSSSEWQFIQGLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTSPSHKELWTGAQSFLSTGTTKNLSDDISNYSYVEVYTTHKTTEKTKGNDNTGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPITEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP NUMBER_OF_AA : 458 REAL_NUMBER_OF_AA : 458 SGI_CENTER : Others OLIGOMERIC_STATE : trimeric BINDING_SITES : unknown LIGANDS : unknown STOICHIOMETRY : A3 DISORDER : 1-61 SOLVENT : 10 mM Tris-HCl pH 8.5, 8% PEG 8000, 200 mM LiCl, 50 mM MgSO4 PROTEIN_MATERIAL : YES EXPRESSION : Bacterial BLAST_INFO : HHSEARCH_INFO : DIFFICULTY : Other info : Baseplate protein of bacteriophage K, possibly involved in recognition of its Staphylococcus host. Fold unknown. The structure should also allow localization in the known EM map of the phage baseplate. Note that a partial structure for this protein is already known, residues 229-458, PDB code 5M9F. Now we have the full-length unpublished structure, so the aim would be to test prediction of the structure of the remaining residues 62-228.
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