Targets - CASP13

Control Panel: Prediction Center

Prediction Center

CASP13 Menu

Home - groups

Exper. Sequences

Predictions

Predictions Log

Evaluation System

Upload and run tasks

Tasks status

Upload results

Server status

Task details

Targets summary (SLOW!)

Queue status

Results text tables

Distribution System

distribution.log

Logger

Meeting

Registrations

Edit Targets

Sequence Name:	H0986
Target:
Sequence(s):	>Toxin IKTVLDTAQAPYKGSTVIGHALSKHAGRHPEIWGKVKGSMSGWNEQAMKHFKEIVRAPGEFRPTMNEKGITFLEKRLIDGRGVRLNLDGTFKGFID
Comments:	Starting model's GDT_HA=59. Residues 1-4 are absent from the target structure and deleted from the starting model.
Subunit(s):	1
Target List Comments:
PDB Code:
Chain:
Is Server Only:
Is CAPRI:
Release date:	Today Tomorrow Day After Tomorrow Next Monday
Server Expiration:
Soft Expiration:
Human Expiration:
Cancel target:
Cancellation date:

Sequence summary:	Sequence TSID: 90 Target: H0986 SEQUENCE : >Toxin IKTVLDTAQAPYKGSTVIGHALSKHAGRHPEIWGKVKGSMSGWNEQAMKHFKEIVRAPGEFRPTMNEKGITFLEKRLIDGRGVRLNLDGTFKGFID >Immune protein MKELFEVIFEGVNTSRLFFLLKEIESKSDRIFDFNFSEDFFSSNVNVFSELLIDSFLGFNGDLYFGVSMEGFSVKDGLKLPVVLLRVLKYEGGVDVGLCFYMNDFNSAGKVMLEFQKYMNGISADFGFENFYGGLEPASDQETRFFTNNRLGPLL NUMBER_OF_AA : 251 REAL_NUMBER_OF_AA : 251 SGI_CENTER : Others OLIGOMERIC_STATE : BINDING_SITES : LIGANDS : STOICHIOMETRY : A1B1 DISORDER : 1-4 SOLVENT : Protein: 6.4mg/ml, 0.5 Sodium chloride, 0.01M Tris pH 8.3; Screen: Clasics II (D6), 0.1M Bis-Tris pH 5.5, 25% (w/v) PEG 3350; PROTEIN_MATERIAL : YES EXPRESSION : E. coli, BL21 (DE3) magic BLAST_INFO : HHSEARCH_INFO : DIFFICULTY : Other info : CdiA is a large previously uncharacterized protein of Pseudomonas aeruginosa recently shown to impact virulence in mice and with an interesting structure suggesting intragenic reassortment and a toxic C-terminal tip. This immunity protein inhibits a specific C-terminal tip of FhlB and prevents this C-terminal tip from killing the bacterium. C-Terminal Tip of CdiA (Uniprot A0A157WHH8) Immune Protein (UniProt A0A0H2ZK44)

© Prediction Center, 2007-2024