Targets - CASP13

1.

T0978

Server

2018-05-31

2018-06-03

2018-06-09

Protein: DpdA, WP_001542917.1
Organism: Salmonella enterica
Target list Comment:

2018-05-29

2.

T0967

Server

2018-05-17

2018-05-20

2018-05-26

Protein: MamB, Magnetosome protein
Organism: [Candidatus Desulfamplus magnetomortis BW-1]
Target list Comment:

2018-05-16

3.

T0951

Server

2018-05-03

2018-05-09

2018-05-15

Protein: ShHTL7
Organism: Striga hermonthica
Target list Comment:

2018-04-04

4.

T0974s2

Server

2018-05-25

2018-05-28

2018-06-03

Protein: O48503/O48504
Organism:
Target list Comment:

2018-05-22

5.

T0982

Server

2018-06-05

2018-06-08

2018-06-16

Protein: DynU16
Organism: Micromonospora chersina
Target list Comment:

2018-06-05

6.

T0971

Server

2018-05-23

2018-05-26

2018-06-02

Protein: nuclear transport factor 2
Organism: Streptomyces RM 5-8
Target list Comment:

2018-05-21

7.

T0962

Server

2018-05-21

2018-05-24

2018-05-30

Protein: Endolysin KPP12
Organism: Pseudomonas phage KPP12
Target list Comment:

2018-05-10

8.

T0950

Server

2018-05-02

2018-05-05

2018-05-15

Protein: PaxB
Organism: Photorhabdus luminescens
Target list Comment: Reclassified to server only (paper released before the human deadline)

2018-04-26

9.

H0968

Human

2018-05-18

2018-05-21

2018-06-08

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

2018-05-16

10.

T0957s1

Human

2018-05-09

2018-05-15

2018-05-30

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

2018-04-02

11.

T0964

Human

2018-05-16

2018-05-19

2018-06-06

Protein: CBM56
Organism: Bacillus circulans
Target list Comment:

2018-05-14

12.

T0979

Human

2018-05-31

2018-06-03

2018-06-21

Protein: A0A0G1XU35_9BACT
Organism: Candidatus Giovannonibacteria bacterium GW2011_GWA2_53_7
Target list Comment:

2018-05-29

13.

T0958

Human

2018-05-10

2018-05-15

2018-05-31

Protein: LP1413
Organism: Staphylococcus aureus
Target list Comment:

2018-03-22

14.

H0957

Human

2018-05-09

2018-05-15

2018-05-30

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

2018-02-03

15.

T0968s2

Human

2018-05-18

2018-05-21

2018-06-08

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

2018-05-16

16.

T0963

Human

2018-05-15

2018-05-18

2018-06-05

Protein: PA0620
Organism:
Target list Comment:

2018-05-14

17.

S0953s1

Human

2018-05-29

2018-06-01

2018-06-12

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

This is a SAXS-assisted target representing the first subunit of the H0953 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-05-22

18.

T0973 *

Human

2018-05-24

2018-05-27

2018-06-14

Protein: Bacteriophage ESE058 coat protein
Organism: unknown
Target list Comment:

2018-05-22

19.

T0968s1

Human

2018-05-18

2018-05-21

2018-06-08

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

2018-05-16

20.

T0956

Human

2018-05-08

2018-05-14

2018-05-29

Protein: K0A2T3
Organism: Rhabdoviridae
Target list Comment: Canceled: no structure.

2018-05-01

21.

T0974s1

Human

2018-05-25

2018-05-28

2018-06-15

Protein: O48503/O48504
Organism:
Target list Comment:

2018-05-22

22.

T0966 *

Human

2018-05-17

2018-05-20

2018-06-07

Protein: Ras/Rap1 site-specific endopeptidase
Organism: Vibrio vulnificus CMCP6
Target list Comment:

2018-05-15

23.

T0955

Human

2018-05-08

2018-05-14

2018-05-29

Protein: gHEEE_02
Organism:
Target list Comment:

2018-04-30

24.

T0961 *

Human

2018-05-21

2018-05-24

2018-06-11

Protein: Q6MJ59
Organism: Bdellovibrio bacteriovorus, gene bd2924
Target list Comment:

2018-04-30

25.

T0969

Human

2018-05-22

2018-05-25

2018-06-12

Protein: XOAT1
Organism: Arabidopsis thaliana
Target list Comment:

2018-05-21

26.

T0981

Human

2018-06-04

2018-06-07

2018-06-25

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

2018-05-29

27.

T0953s1

Human

2018-05-04

2018-05-10

2018-05-25

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

2018-04-05

28.

S0957s1

Human

2018-05-31

2018-06-03

2018-06-14

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is a SAXS-assisted target representing the first subunit of the H0957 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-05-29

29.

T0952

Human

2018-05-03

2018-05-06

2018-05-24

Protein: O48503
Organism: TP901-1
Target list Comment: Canceled: paper released before the prediction deadline.

2018-04-05

30.

S0949

Human

2018-05-22

2018-05-25

2018-06-10

Protein: B7JAQ5_ACIF2
Organism: Acidithiobacillus ferrooxidans
Target list Comment:

This is a SAXS-assisted target. The data were collected on the full length protein. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-05-21

31.

T0949

Human

2018-05-01

2018-05-04

2018-05-21

Protein: B7JAQ5_ACIF2
Organism: Acidithiobacillus ferrooxidans
Target list Comment:

2018-02-03

32.

H0980

Human

2018-06-01

2018-06-04

2018-06-22

Protein: Q3KP22-3; Q8NHR7
Organism: Human
Target list Comment:

2018-05-30

33.

T0972

Human

2018-05-24

2018-05-27

2018-06-14

Protein: Q0P914_CAMJE
Organism: Campylobacter jejuni subsp. jejuni serotype O:2
Target list Comment: Canceled: no structure.

2018-05-22

34.

S0957s2

Human

2018-05-31

2018-06-03

2018-06-14

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is a SAXS-assisted target representing the second subunit of the H0953 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-05-29

35.

T0953s2

Human

2018-05-04

2018-05-10

2018-05-25

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

2018-04-04

36.

T0957s2

Human

2018-05-09

2018-05-15

2018-05-30

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

2018-04-02

37.

T0970

Human

2018-05-23

2018-05-26

2018-06-13

Protein: Q6ZWB6
Organism: Homo Sapiens
Target list Comment:

2018-05-21

38.

R0949

Human

2018-05-31

2018-06-03

2018-06-21

Protein: B7JAQ5_ACIF2
Organism: Acidithiobacillus ferrooxidans
Target list Comment:

Starting model's GDT_HA=49. 
Residues 1-42, 96-105 and 182-183 are not ordered in the crystal structure and deleted from the starting model. 
The structure contains a bound Cu ion.

2018-05-31

39.

R0968s1

Human

2018-06-14

2018-06-17

2018-07-04

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

Starting model's GDT_HA=45. Residues 1-5 and 124-126 are absent from the target structure and deleted from the starting model.

2018-06-13

40.

R0959

Human

2018-06-05

2018-06-08

2018-06-25

Protein: Endolysin ARW58837.1
Organism: Erwinia phage vB_EamM_Y3
Target list Comment:

Starting model's GDT_HA=45.

2018-05-31

41.

T0996

Human

2018-06-20

2018-06-23

2018-07-11

Protein: YebT
Organism: E. coli
Target list Comment:

2018-06-18

42.

R0962

Human

2018-06-06

2018-06-09

2018-06-27

Protein: Endolysin KPP12
Organism: Pseudomonas phage KPP12
Target list Comment:

Starting model's GDT_HA=63 (on residues 2-178). Residues 1 and 179-220 are absent from the target and deleted from the starting model.

2018-06-05

43.

X0953

Human

2018-06-12

2018-06-15

2018-07-01

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

This is a cross-linking assisted modeling target. The data were collected on the whole heteromeric complex. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010094 <br>
and use the following credentials to login: <br>
Username: reviewer70721@ebi.ac.uk <br>
Password: M9rdkSXT<p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf.

2018-06-12

44.

R0968s2

Human

2018-06-14

2018-06-17

2018-07-04

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

Starting model's GDT_HA=50.

2018-06-13

45.

X0957

Human

2018-06-14

2018-06-17

2018-07-02

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is a cross-linking assisted modeling target. The data were collected on the whole heteromeric complex. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010003 <br>
and use the following credentials to login: <br>
Username: reviewer44414@ebi.ac.uk <br>
Password: wbhw7G4Q <p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-06-14

46.

S0968

Human

2018-06-11

2018-06-14

2018-06-25

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is a SAXS-assisted target corresponding to H0968 complex. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-06-11

47.

T0988 *

Human

2018-06-12

2018-06-15

2018-07-03

Protein: YP_006383572
Organism: Goose adenovirus 4
Target list Comment: Canceled: identical to T0881 in CASP12

2018-06-11

48.

T0980s2

Human

2018-06-01

2018-06-04

2018-06-22

Protein: Q3KP22-3; Q8NHR7
Organism: Human
Target list Comment:

2018-05-30

49.

T0985

Human

2018-06-07

2018-06-10

2018-06-28

Protein: ACL_1061
Organism: Acholeplasma laidlawii PG-8A
Target list Comment:

2018-06-05

50.

T0993s1

Human

2018-06-15

2018-06-18

2018-07-06

Protein: MlaFA
Organism: E. coli
Target list Comment:

2018-06-13

51.

T0993s2

Human

2018-06-15

2018-06-18

2018-07-06

Protein: MlaFA
Organism: E. coli
Target list Comment:

2018-06-13

52.

R0958

Human

2018-06-01

2018-06-04

2018-06-17

Protein: LP1413
Organism: Staphylococcus aureus
Target list Comment: Canceled - paper appeared online.

<em><font color=red>Canceled - paper appeared online.</font></em>

2018-06-01

53.

T0980s1

Human

2018-06-01

2018-06-04

2018-06-22

Protein: Q3KP22-3; Q8NHR7
Organism: Human
Target list Comment:

2018-05-30

54.

T0989

Human

2018-06-12

2018-06-15

2018-07-03

Protein: Q6XQB2.1
Organism: coliphage T1
Target list Comment:

2018-06-11

55.

R0957s2

Human

2018-06-05

2018-06-08

2018-06-26

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

Starting model's GDT_HA=39. Residues 1-6 are absent from the target structure and deleted from the starting model.

2018-06-05

56.

T0990

Human

2018-06-13

2018-06-16

2018-07-04

Protein: NS1
Organism: Bluetongue Virus
Target list Comment:

2018-06-11

57.

T0991

Human

2018-06-14

2018-06-17

2018-07-05

Protein: Bacteriophage ESE001 coat protein
Organism: unknown
Target list Comment:

2018-06-12

58.

T0983 *

Human

2018-06-05

2018-06-08

2018-06-26

Protein: Cals10
Organism: Micromonospora echinospora
Target list Comment:

2018-06-05

59.

T0984 *

Human

2018-06-06

2018-06-09

2018-06-27

Protein: Q8NHX9
Organism: Homo sapiens
Target list Comment:

2018-06-05

60.

X0957s1

Human

2018-06-14

2018-06-17

2018-07-02

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were collected on the whole heteromeric complex. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010003 <br>
and use the following credentials to login: <br>
Username: reviewer44414@ebi.ac.uk <br>
Password: wbhw7G4Q <p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-06-14

61.

T1021s3

Human

2018-07-13

2018-07-16

2018-08-03

Protein: Q6HAD8,Q6HAD7,Q6HAC3
Organism: Serratia entomophila antifeeding prophage
Target list Comment:

2018-07-12

62.

T1007

Human

2018-07-02

2018-07-05

2018-07-23

Protein: Proline-rich acidic protein 1
Organism:
Target list Comment: Canceled: no structure.

2018-06-26

63.

T1023s2

Human

2018-07-17

2018-07-20

2018-08-06

Protein: eIF2
Organism:
Target list Comment: Canceled: no structure.

2018-07-15

64.

H1022

Human

2018-07-16

2018-07-19

2018-08-05

Protein: Q6HAD2,Q6HAD1
Organism: Serratia entomophila antifeeding prophage
Target list Comment:

2018-07-12

65.

T0992

Human

2018-06-14

2018-06-17

2018-07-05

Protein: Q6MKZ7
Organism: Bdellovibrio bacteriovorus
Target list Comment:

2018-06-12

66.

H0986

Human

2018-06-08

2018-06-11

2018-06-29

Protein: Toxic C-Terminal Tip of CdiA and Immune Protein
Organism: Pseudomonas aeruginosa
Target list Comment:

2018-06-06

67.

T0986s2

Human

2018-06-08

2018-06-11

2018-06-29

Protein: Toxic C-Terminal Tip of CdiA and Immune Protein
Organism: Pseudomonas aeruginosa
Target list Comment:

2018-06-06

68.

R0974s1

Human

2018-06-22

2018-06-25

2018-07-13

Protein: O48503/O48504
Organism:
Target list Comment:

Starting model's GDT_HA=66. Residues 1 and 71-72 are absent from the target structure and deleted from the starting model.

2018-06-22

69.

S0980

Human

2018-06-22

2018-06-25

2018-07-08

Protein: Q3KP22-3; Q8NHR7
Organism: Human
Target list Comment:

This is a SAXS-assisted target representing the H0980 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-06-22

70.

T0995 *

Human

2018-06-19

2018-06-22

2018-07-10

Protein: UniProtKB - B3GNT7 (B3GNT7_BACPU)
Organism: University of Cape Town
Target list Comment:

2018-06-18

71.

R0981-D4

Human

2018-07-03

2018-07-06

2018-07-24

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This refinement target corresponds to domain 4 (res. 403-513) of T0981. Starting model's GDT_HA=45 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. The interface in the starting model is modeled reasonably accurate.

2018-07-02

72.

T1002

Human

2018-06-26

2018-06-29

2018-07-17

Protein: Q184J8
Organism: Clostridium difficile
Target list Comment:

2018-06-25

73.

T0997 *

Human

2018-06-21

2018-06-24

2018-07-12

Protein: Q6MN59
Organism: Bdellovibrio bacteriovorus
Target list Comment:

2018-06-19

74.

X0957s2

Human

2018-06-14

2018-06-17

2018-07-02

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were collected on the whole heteromeric complex. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/ <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010003 <br>
and use the following credentials to login: <br>
Username: reviewer44414@ebi.ac.uk <br>
Password: wbhw7G4Q <p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-06-14

75.

T0999 *

Human

2018-06-22

2018-06-25

2018-07-13

Protein: G0S061_CHATD
Organism: Chaetomium thermophilum
Target list Comment:

2018-06-20

76.

T0998

Human

2018-06-21

2018-06-24

2018-07-12

Protein: Bacteripohage AVE016 coat protein
Organism: unknown
Target list Comment:

2018-06-19

77.

T1001

Human

2018-06-26

2018-06-29

2018-07-17

Protein: Q6MIM9
Organism: Bdellovibrio bacteriovorus
Target list Comment:

2018-06-25

78.

S0980s2

Human

2018-06-22

2018-06-25

2018-07-08

Protein: Q3KP22-3; Q8NHR7
Organism: Human
Target list Comment:

This is a SAXS-assisted target representing the second subunit of the H0980 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-06-22

79.

S0985

Human

2018-06-29

2018-07-02

2018-07-18

Protein: ACL_1061
Organism: Acholeplasma laidlawii PG-8A
Target list Comment:

This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-06-22

80.

S0980s1

Human

2018-06-22

2018-06-25

2018-07-08

Protein: Q3KP22-3; Q8NHR7
Organism: Human
Target list Comment:

This is a SAXS-assisted target representing the first subunit of the H0980 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-06-22

81.

T1005

Human

2018-06-29

2018-07-02

2018-07-20

Protein: BT1044
Organism: Bacteroides thetaiotaomicron
Target list Comment:

2018-06-26

82.

S0975

Human

2018-06-25

2018-06-28

2018-07-14

Protein: EXO5
Organism: Human
Target list Comment:

This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-06-22

83.

T1023s3

Human

2018-07-17

2018-07-20

2018-08-06

Protein: eIF2
Organism:
Target list Comment: Canceled: no structure.

2018-07-15

84.

T0994

Human

2018-06-18

2018-06-21

2018-07-09

Protein: Q79ER8_STAAU
Organism: Staphylococcus aureus
Target list Comment: Canceled: no structure.

2018-06-15

85.

X0968

Human

2018-06-26

2018-06-29

2018-07-15

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is a cross-linking assisted modeling target. The data were collected on the whole heteromeric complex. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010003 <br>
and use the following credentials to login: <br>
Username: reviewer91348@ebi.ac.uk<br>
Password: q9fEUNmI <p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-06-25

86.

R0981-D3

Human

2018-07-05

2018-07-08

2018-07-26

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This refinement target corresponds to domain 3 (res. 191-393) of T0981. Starting model's GDT_HA=32 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. The interface in the starting model is modeled reasonably accurate.

2018-07-02

87.

A0953

Human

2018-07-02

2018-07-05

2018-07-23

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

This is a SANS-assisted target for the H0953 heteromer. With this target we want to explore (in a non-competitive mode) the added value of small-angle neutron scattering data for structure prediction.
<p>
The data were collected on the full heteromeric complex. They are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/A0953_SANS*
<p>
The description of the data can be found at http://predictioncenter.org/casp13/doc/SANS-SG_AM_tutorial.pdf

2018-07-02

88.

R0981-D5

Human

2018-07-03

2018-07-06

2018-07-24

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This refinement target corresponds to domain 5 (res. 514-640) of T0981. Starting model's GDT_HA=42 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. Residues 605-623 are a part of a homotrimer interface and modeling of this segment can be improved the most.

2018-07-02

89.

H1019 *

Human

2018-07-12

2018-07-15

2018-07-31

Protein: CDI207t
Organism: E.coli
Target list Comment:

2018-07-09

90.

R0992

Human

2018-07-11

2018-07-14

2018-08-01

Protein: Q6MKZ7
Organism: Bdellovibrio bacteriovorus
Target list Comment:

Starting model's GDT_HA=65. Residues 1-3, 111-126 are absent from the target and deleted from the starting model.

2018-07-10

91.

R0977-D2

Human

2018-07-06

2018-07-09

2018-08-01

Protein: YP_004957431.1
Organism: Staphylococcus phage S24-1
Target list Comment:

This refinement target corresponds to domain 2 (res. 360-563) of T0977. Starting model's GDT_HA=68 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. The interface in the starting model is modeled reasonably accurate.

2018-07-05

92.

T1009 *

Human

2018-07-03

2018-07-06

2018-07-24

Protein: A2QTU5.1
Organism: Aspergillus niger
Target list Comment:

2018-07-02

93.

H1015 *

Human

2018-07-10

2018-07-13

2018-08-01

Protein: CDI_213
Organism:
Target list Comment:

2018-07-09

94.

T1015s2

Human

2018-07-10

2018-07-13

2018-08-01

Protein: CDI_213
Organism:
Target list Comment:

2018-07-09

95.

T1017s2

Human

2018-07-11

2018-07-14

2018-08-01

Protein: 201_INDD4
Organism: E.coli
Target list Comment:

2018-07-09

96.

S0992

Human

2018-07-06

2018-07-09

2018-07-22

Protein: Q6MKZ7
Organism: Bdellovibrio bacteriovorus
Target list Comment:

This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-07-05

97.

T1017s1

Human

2018-07-11

2018-07-14

2018-08-01

Protein: 201_INDD4
Organism: E.coli
Target list Comment:

2018-07-09

98.

H1017 *

Human

2018-07-11

2018-07-14

2018-08-01

Protein: 201_INDD4
Organism: E.coli
Target list Comment:

2018-07-09

99.

T1010

Human

2018-07-05

2018-07-08

2018-07-26

Protein: B2BM43
Organism: Micromonospora chersina
Target list Comment:

2018-07-02

100.

R0986s2

Human

2018-07-09

2018-07-12

2018-08-01

Protein: Toxic C-Terminal Tip of CdiA and Immune Protein
Organism: Pseudomonas aeruginosa
Target list Comment:

Starting model's GDT_HA=49.

2018-07-09

101.

R0986s1

Human

2018-07-09

2018-07-12

2018-08-01

Protein: Toxic C-Terminal Tip of CdiA and Immune Protein
Organism: Pseudomonas aeruginosa
Target list Comment:

Starting model's GDT_HA=59. Residues 1-4 are absent from the target structure and deleted from the starting model.

2018-07-07

102.

T1003 *

Human

2018-06-27

2018-06-30

2018-07-17

Protein: ALAS2
Organism:
Target list Comment:

2018-06-26

103.

T1021s2

Human

2018-07-13

2018-07-16

2018-08-03

Protein: Q6HAD8,Q6HAD7,Q6HAC3
Organism: Serratia entomophila antifeeding prophage
Target list Comment:

2018-07-12

104.

T1020 *

Human

2018-07-12

2018-07-15

2018-07-31

Protein: SLAC1
Organism: A0A0Q3IDG7
Target list Comment:

2018-07-09

105.

T1016

Human

2018-07-10

2018-07-13

2018-08-01

Protein: IDP96117
Organism:
Target list Comment:

2018-07-09

106.

T1014

Human

2018-07-09

2018-07-12

2018-08-01

Protein: WP_010918027.1
Organism:
Target list Comment:

2018-07-05

107.

T1004

Human

2018-06-28

2018-07-01

2018-07-19

Protein: YP_009041344.1
Organism: Staphylococcal bacteriophage K
Target list Comment:

2018-06-26

108.

T1008

Human

2018-07-03

2018-07-06

2018-07-24

Protein: UW_engnr
Organism: engineered
Target list Comment:

2018-07-02

109.

S0987

Human

2018-07-05

2018-07-08

2018-07-22

Protein: Enterococcal surface protein
Organism: Enterococcus faecalis
Target list Comment:

This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-07-05

110.

T1021s1

Human

2018-07-13

2018-07-16

2018-08-03

Protein: Q6HAD8,Q6HAD7,Q6HAC3
Organism: Serratia entomophila antifeeding prophage
Target list Comment:

2018-07-12

111.

T1018

Human

2018-07-11

2018-07-14

2018-08-01

Protein: IDP04388
Organism: Vibrio cholerae O1 biovar El Tor str. N16961
Target list Comment:

2018-07-09

112.

X0953s2

Human

2018-06-12

2018-06-15

2018-07-01

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were collected on the whole heteromeric complex. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010094 <br>
and use the following credentials to login: <br>
Username: reviewer70721@ebi.ac.uk <br>
Password: M9rdkSXT<p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf.

2018-06-12

113.

T1019s1

Human

2018-07-12

2018-07-15

2018-07-31

Protein: CDI207t
Organism: E.coli
Target list Comment:

2018-07-09

114.

H1021 *

Human

2018-07-13

2018-07-16

2018-08-03

Protein: Q6HAD8,Q6HAD7,Q6HAC3
Organism: Serratia entomophila antifeeding prophage
Target list Comment:

2018-07-12

115.

T1019s2

Human

2018-07-12

2018-07-15

2018-07-31

Protein: CDI207t
Organism: E.coli
Target list Comment:

2018-07-09

116.

T1015s1

Human

2018-07-10

2018-07-13

2018-08-01

Protein: CDI_213
Organism:
Target list Comment:

2018-07-09

117.

R0989-D1

Human

2018-07-13

2018-07-16

2018-08-03

Protein: Q6XQB2.1
Organism: coliphage T1
Target list Comment:

This refinement target corresponds to domain 1 (res. 1-134) of T0989. Starting model's GDT_HA=34 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. There is a lot of room for improvement, especially in the N-terminus.

2018-07-12

118.

R0997

Human

2018-07-18

2018-07-21

2018-08-08

Protein: Q6MN59
Organism: Bdellovibrio bacteriovorus
Target list Comment:

Starting model's GDT_HA=42 (on residues 44-228). Residues 1-43 are deleted from the starting model.

2018-07-17

119.

R0979

Human

2018-07-19

2018-07-22

2018-08-09

Protein: A0A0G1XU35_9BACT
Organism: Candidatus Giovannonibacteria bacterium GW2011_GWA2_53_7
Target list Comment:

This is the first oligomeric refinement target in CASP. Being a trimer, it is somewhat longer than other refinement targets in CASP13: 276 residues total. GDT_HA of the starting model's monomeric unit is 55 (on 92 residues; residues 1-5 and 98 are absent from the experimental structure). LDDT score of the oligomeric starting model is 0.81; the inter-chain contact accuracy score F1=43%. All rules pertaining to submission of regular homo-oligomeric targets apply here.

2018-07-17

120.

R0999-D3

Human

2018-07-20

2018-07-23

2018-08-10

Protein: G0S061_CHATD
Organism: Chaetomium thermophilum
Target list Comment:

This refinement target corresponds to domain 3 (res. 866-1045) of T0999. Starting model's GDT_HA=54 (calculated on residues belonging to the domain). The original target is a homodimer.

2018-07-18

121.

S0999 *

Human

2018-07-13

2018-07-16

2018-07-31

Protein: G0S061_CHATD
Organism: Chaetomium thermophilum
Target list Comment:

This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-07-12

122.

H1023

Human

2018-07-17

2018-07-20

2018-08-06

Protein: eIF2
Organism:
Target list Comment: Canceled: no structure.

2018-07-15

123.

T1023s1

Human

2018-07-17

2018-07-20

2018-08-06

Protein: eIF2
Organism:
Target list Comment: Canceled: no structure.

2018-07-15

124.

X0975

Human

2018-07-16

2018-07-19

2018-08-06

Protein: EXO5
Organism: Human
Target list Comment:

This is a cross-linking assisted modeling target. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010385 <br>
and use the following credentials to login: <br>
Username: reviewer81343@ebi.ac.uk <br>
Password: zK0BY71P<p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-07-15

125.

x0968

Human

2018-07-16

2018-07-19

2018-08-02

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is a cross-linking assisted modeling target. The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0968_Berlin.csv. <p>
Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.<p>
The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.<p>
To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/
and use the following credentials to login:
Project accession: PXD010884
Username:  reviewer91980@ebi.ac.uk
Password: Ow22Vk9d

2018-07-15

126.

X0985

Human

2018-07-19

2018-07-22

2018-08-08

Protein: ACL_1061
Organism: Acholeplasma laidlawii PG-8A
Target list Comment:

This is a cross-linking assisted modeling target. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010483 <br>
and use the following credentials to login: <br>
Username:  reviewer80816@ebi.ac.uk <br>
Password:  4Z1QRYaH<p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-07-18

127.

X0999 *

Human

2018-08-01

2018-08-04

2018-08-20

Protein: G0S061_CHATD
Organism: Chaetomium thermophilum
Target list Comment:

This is a cross-linking assisted modeling target. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
Raw XL-MS data for this target are currently unavailable.

2018-07-18

128.

T1022s1

Human

2018-07-16

2018-07-19

2018-08-05

Protein: Q6HAD2,Q6HAD1
Organism: Serratia entomophila antifeeding prophage
Target list Comment:

2018-07-12

129.

T1022s2

Human

2018-07-16

2018-07-19

2018-08-05

Protein: Q6HAD2,Q6HAD1
Organism: Serratia entomophila antifeeding prophage
Target list Comment:

2018-07-12

130.

R1001

Human

2018-07-24

2018-07-27

2018-08-14

Protein: Q6MIM9
Organism: Bdellovibrio bacteriovorus
Target list Comment:

Starting model's GDT_HA=53. Residue 1 is absent from the target and deleted from the starting model.

2018-07-18

131.

R1002-D2

Human

2018-07-23

2018-07-26

2018-08-13

Protein: Q184J8
Organism: Clostridium difficile
Target list Comment:

This refinement target corresponds to domain 2 (res. 60-118) of T1002. Starting model's GDT_HA=66 (calculated on residues belonging to the domain).

2018-07-18

132.

N0968s1

Human

2018-08-03

2018-08-06

2018-08-19

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is an NMR-simulated data-assisted target representing the first subunit of H0968 heteromer. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for each target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-07-30

133.

x0957

Human

2018-07-05

2018-07-08

2018-07-25

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is a cross-linking assisted modeling target. The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0957_Berlin.csv. <p>
Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.<p>
The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.<p>
To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/
and use the following credentials to login:
Project accession: PXD010884
Username:  reviewer91980@ebi.ac.uk
Password: Ow22Vk9d

2018-07-05

134.

x0975

Human

2018-08-06

2018-08-09

2018-08-20

Protein: EXO5
Organism: Human
Target list Comment:

This is a cross-linking assisted modeling target. The experimental data were acquired by J.Rappsilber's group and posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0975_Berlin.csv.
<p>
Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.
<p>
The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.<p>
To access raw XL-MS data for this target, please go to https://www.ebi.ac.uk/pride/archive/projects/
and use the following credentials to login:
Project accession: PXD010884
Username:  reviewer91980@ebi.ac.uk
Password: Ow22Vk9d

2018-07-25

135.

N0953s2

Human

2018-07-20

2018-07-23

2018-08-16

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment: Canceled: structure appeared in the PDB on Aug 1.

This is an NMR-simulated data-assisted target representing the second subunit of the H0953 heteromer. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Each zip includes five (tab-delimited) text files. E.g.
T0953s2_ambiR.txt  (NMR-derived ambiguous contacts)
T0953s2_dihed.txt  (NMR-derived ranges for phi and psi)
T0953s2_ECs.txt  (Evolutionary constraints)
T0953s2_RDCs.txt  (NMR-derived residual dipolar couplings)
T0953s2_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at 
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf

2018-07-19

136.

N0957s1

Human

2018-07-26

2018-07-29

2018-08-17

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is an NMR-simulated data-assisted target representing the first subunit of the H0957 heteromer. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for each target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts);
_dihed.txt  (NMR-derived ranges for phi and psi);
_ECs.txt  (Evolutionary constraints);
_RDCs.txt  (NMR-derived residual dipolar couplings);
_seq.txt   (protein/domain sequence).
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-07-25

137.

N0968s2

Human

2018-08-03

2018-08-06

2018-08-19

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is an NMR-simulated data-assisted target representing the second subunit of H0968 heteromer. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for each target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-07-25

138.

H0953

Human

2018-05-04

2018-05-07

2018-05-25

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

2018-04-04

139.

R0982-D2

Human

2018-08-07

2018-08-10

2018-08-23

Protein: DynU16
Organism: Micromonospora chersina
Target list Comment:

This refinement target corresponds to domain 2 (res. 146-277) of T0982. Starting model's GDT_HA=50 (calculated on residues belonging to the domain).

2018-08-06

140.

R1004-D2

Human

2018-08-03

2018-08-06

2018-08-19

Protein: YP_009041344.1
Organism: Staphylococcal bacteriophage K
Target list Comment:

This refinement target corresponds to domain 2 (res. 152-228) of T1004. Starting model's GDT_HA=60 (calculated on residues belonging to the domain).

2018-08-02

141.

N0989

Human

2018-07-31

2018-08-03

2018-08-18

Protein: Q6XQB2.1
Organism: coliphage T1
Target list Comment:

This is an NMR-simulated data-assisted target corresponding to regular target T0989. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for the target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts);
_dihed.txt  (NMR-derived ranges for phi and psi);
_ECs.txt  (Evolutionary constraints);
_RDCs.txt  (NMR-derived residual dipolar couplings);
_seq.txt   (protein/domain sequence).
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-07-30

142.

T1006 *

Human

2018-07-02

2018-07-05

2018-07-23

Protein: >MamM magnetosome protein
Organism: [Candidatus Desulfamplus magnetomortis BW-1]
Target list Comment:

2018-06-26

143.

R0976-D1

Human

2018-08-08

2018-08-11

2018-08-24

Protein: Rhodanese-like family protein
Organism: Francisella tularensis subsp. tularensis SCHU S4
Target list Comment:

This refinement target corresponds to domain 1 (res. 9-128) of T0976. Starting model's GDT_HA=69 (calculated on residues belonging to the domain).

2018-08-07

144.

R0976-D2

Human

2018-08-08

2018-08-11

2018-08-24

Protein: Rhodanese-like family protein
Organism: Francisella tularensis subsp. tularensis SCHU S4
Target list Comment:

This refinement target corresponds to domain 2 (res. 129-252) of T0976. Starting model's GDT_HA=65 (calculated on residues belonging to the domain).

2018-08-07

145.

R1016

Human

2018-08-09

2018-08-12

2018-08-24

Protein: IDP96117
Organism:
Target list Comment:

This refinement target corresponds to T1016. Starting model's GDT_HA=63.

2018-08-07

146.

N0980s1

Human

2018-08-07

2018-08-10

2018-08-22

Protein: Q3KP22-3; Q8NHR7
Organism: Human
Target list Comment:

This is an NMR-simulated data-assisted target representing the first subunit of H0980 heteromer. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for each target includes tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-08-07

147.

T1012

Human

2018-07-06

2018-07-09

2018-08-01

Protein: Puromycin N-acetyltransferase
Organism:
Target list Comment: Canceled: no structure.

2018-07-02

148.

R1009-D3

Human

2018-08-07

2018-08-10

2018-08-23

Protein: A2QTU5.1
Organism: Aspergillus niger
Target list Comment:

This refinement target corresponds to domain 3 (res. 595-718) of T1009. The target is a glycoprotein. Starting model's GDT_HA=63 (calculated on residues belonging to the domain).
<em><font color=red>Canceled: structure 6dru appeared in the PDB on Aug 21.</font></em>

2018-08-06

149.

N0981-D5

Human

2018-08-09

2018-08-12

2018-08-23

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This simulated NMR data-assisted target corresponds to domain 5 (res. 514-640) of T0981. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for the target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-08-09

150.

N0981-D4

Human

2018-08-09

2018-08-12

2018-08-23

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This simulated NMR data-assisted target corresponds to domain 4 (res. 403-513) of T0981. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for the target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-08-09

151.

N0981-D3

Human

2018-08-09

2018-08-12

2018-08-23

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This simulated NMR data-assisted target corresponds to domain 3 (res. 191-393) of T0981. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for the target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-08-09

152.

N0981-D2

Human

2018-08-09

2018-08-12

2018-08-23

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This simulated NMR data-assisted target corresponds to domain 2 (res. 120-190, 394-402) of T0981. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for the target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-08-09

153.

N0981-D1

Human

2018-08-09

2018-08-12

2018-08-23

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This simulated NMR data-assisted target corresponds to domain 1 (res. 34-119) of T0981. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for the target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-08-09

154.

R0993s2

Human

2018-08-09

2018-08-12

2018-08-24

Protein: MlaFA
Organism: E. coli
Target list Comment:

This refinement target corresponds to second subunit of H0993 complex. Starting model's GDT_HA=51. The His-tag was not observed in density, so that the chain should start with residue 12.

2018-08-09

155.

R0996-D4

Human

2018-08-10

2018-08-13

2018-08-25

Protein: YebT
Organism: E. coli
Target list Comment:

This refinement target corresponds to domain 4 (res. 351-483) of T0996. Starting model's GDT_HA=53 (calculated on residues belonging to the domain).

2018-08-10

156.

R0996-D5

Human

2018-08-10

2018-08-13

2018-08-25

Protein: YebT
Organism: E. coli
Target list Comment:

This refinement target corresponds to domain 5 (res. 484-604) of T0996. Starting model's GDT_HA=56 (calculated on residues belonging to the domain).

2018-08-10

157.

R0996-D7

Human

2018-08-10

2018-08-13

2018-08-25

Protein: YebT
Organism: E. coli
Target list Comment:

This refinement target corresponds to domain 7 (res. 709-848) of T0996. Starting model's GDT_HA=55 (calculated on residues belonging to the domain).

2018-08-10

158.

N0980

Human

2018-08-10

2018-08-13

2018-08-26

Protein: Q3KP22-3; Q8NHR7
Organism: Human
Target list Comment:

This is an NMR-simulated data-assisted target representing the heterodimer target H0980. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for each target includes tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-08-10

159.

T1011

Human

2018-07-06

2018-07-09

2018-08-01

Protein: UNK1
Organism:
Target list Comment:

IMPORTANT info: the Misoprostol ligand is bound to this structure and the additional challenge is to place this ligand in the context. Please include coordinates of the ligand preceded with the REMARK keyword in the PDB/CASP format.

2018-07-02

160.

N1005

Human

2018-08-10

2018-08-13

2018-08-25

Protein: BT1044
Organism: Bacteroides thetaiotaomicron
Target list Comment:

This is simulated NMR data-assisted target corresponding to T1005. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for the target includes five tab-delimited text files: 
_ambiR.txt  (NMR-derived ambiguous contacts)
_dihed.txt  (NMR-derived ranges for phi and psi)
_ECs.txt  (Evolutionary constraints)
_RDCs.txt  (NMR-derived residual dipolar couplings)
_seq.txt   (protein/domain sequence)
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-08-09

161.

T0976 *

Human

2018-05-29

2018-06-01

2018-06-19

Protein: Rhodanese-like family protein
Organism: Francisella tularensis subsp. tularensis SCHU S4
Target list Comment:

2018-05-29

162.

S0953s2

Human

2018-05-29

2018-06-01

2018-06-12

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

This is a SAXS-assisted target representing the second subunit of the H0953 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-05-22

163.

S0981

Human

2018-06-26

2018-06-29

2018-07-15

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This is a SAXS-assisted target. Experimental results are generated on the expressed protein with a tag (not provided in the released CASP sequence). The residues not included in the CASP target are encompassed in brackets in the full sequence below:

[MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGS]
MAFNYTPLTETQKLKDMYPKVNDIGN
FLKTEVNLSDVKQISQPDFNNILASIPDSGNYYVTNSKGAPSGEATAGFVRLDKRNVNYY
KIYYSPYSSNKMYIKTYANGTVYDWISFKLDEGSLYNEGNTLNVKELTESTTQYATLVNP
PKENLNTGWVNYKESKNGVSSLVEFNPVNSTSTFKMIRKLPVQEQKPNLLKDSLFVYPET
SYSNIKTDNWDTPPFWGYSSNSGRSGVRFRGENTVQIDDGSDTYPSVVSNRFKMGKELSV
GDTVTVSVYAKINDPALLKDNLVYFELAGYDTVDDTSKNPYTGGRREITASEITTEWKKY
SFTFTIPENTIGASGVKVNYVSLLLRMNCSSSKGNGAVVYYALPKLEKSSKVTPFITHEN
DVRKYDEIWSNWQEVISKDELKGHSPVDIEYNDYFKYQWWKSEVNEKSLKDLAMTVPQGY
HTFYCQGSIAGTPKGRSIRGTIQVDYDKGDPYRANKFVKLLFTDTEGIPYTLYYGGYNQG
WKPLKQSETSTLLWKGTLDFGSTEAVNLNDSLDNYDLIEVTYWTRSAGHFSTKRLDIKNT
SNLLYIRDFNISNDSTGSSVDFFEGYCTFPTRTSVQPGMVKSITLDGSTNTTKVASWNEK
ERIKVYNIMGINRG

The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html.

2018-06-22

164.

S0968s2

Human

2018-06-11

2018-06-14

2018-06-25

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is a SAXS-assisted target representing the second subunit of the H0968 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-06-11

165.

N1008

Human

2018-08-10

2018-08-13

2018-09-10

Protein: UW_engnr
Organism: engineered
Target list Comment:

This is REAL NMR data -assisted target corresponding to T1008. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for the target includes four files: 
1. ambiguous restraints; 
2. dihedral angle restraints; 
3. sequence file; 
4. a README describing the sample and the nature of the restraints.  
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-08-10

166.

S0968s1

Human

2018-06-11

2018-06-14

2018-06-25

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is a SAXS-assisted target representing the first subunit of the H0968 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-06-11

167.

T0965 *

Human

2018-05-16

2018-05-19

2018-06-06

Protein: NADP reductase
Organism: Streptomyces RM 5-8
Target list Comment:

2018-05-14

168.

T1013

Human

2018-07-09

2018-07-12

2018-08-01

Protein: UNK2
Organism:
Target list Comment:

IMPORTANT info: the structure was solved with a ligand bound and the additional challenge is to place this ligand in the context. Please include coordinates of the ligand preceded with the REMARK keyword in the PDB/CASP format. The structure was solved separately with a CYN-154806 ligand, and with an L-054,522 ligand. If you are planning to submit different sets of coordinates depending on the ligand bound - please submit them as two separate models and specify details in the REMARKS field.

2018-07-02

169.

T0986s1

Human

2018-06-08

2018-06-11

2018-06-29

Protein: Toxic C-Terminal Tip of CdiA and Immune Protein
Organism: Pseudomonas aeruginosa
Target list Comment:

2018-06-06

170.

T1000

Human

2018-06-25

2018-06-28

2018-07-16

Protein: D-galactarate dehydrogenase
Organism: Escherichia coli str. K-12 substr. MG1655.
Target list Comment:

2018-06-20

171.

T0987

Human

2018-06-11

2018-06-14

2018-07-02

Protein: Enterococcal surface protein
Organism: Enterococcus faecalis
Target list Comment:

2018-06-06

172.

T0977

Human

2018-05-30

2018-06-02

2018-06-20

Protein: YP_004957431.1
Organism: Staphylococcus phage S24-1
Target list Comment:

2018-05-29

173.

x0957s1

Human

2018-07-05

2018-07-08

2018-07-25

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0957_Berlin.csv. <p>
Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.<p>
The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.<p>
To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/
and use the following credentials to login:
Project accession: PXD010884
Username:  reviewer91980@ebi.ac.uk
Password: Ow22Vk9d

2018-07-05

174.

n1008

Human

2018-09-18

2018-09-21

2018-09-30

Protein: UW_engnr
Organism: engineered
Target list Comment:

This is REAL NMR data -assisted target corresponding to T1008. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. 
<p>
Zip file for the target includes experimental data for dihedrals, ambiguous distance restraints, and the sequence. With respect to earlier suggested target N1008 (starting from capital 'N'), now both backbone AND extensive sidechain resonance assignments were used to generate the Ambiguous Contact file, so the false positive rate is very low. There is also a README explaining the data. 
<p>
The guidelines on the NMR-assisted data can be found at: 
<br>
http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf
<br>and<br>
http://predictioncenter.org/casp13/doc/NMR_format_descr.pdf

2018-09-18

175.

x0968s2

Human

2018-07-16

2018-07-19

2018-08-02

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0968_Berlin.csv. <p>
Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.<p>
The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.<p>
To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/
and use the following credentials to login:
Project accession: PXD010884
Username:  reviewer91980@ebi.ac.uk
Password: Ow22Vk9d

2018-07-15

176.

X0953s1

Human

2018-06-12

2018-06-15

2018-07-01

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were collected on the whole heteromeric complex. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010094 <br>
and use the following credentials to login: <br>
Username: reviewer70721@ebi.ac.uk <br>
Password: M9rdkSXT<p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf.

2018-06-12

177.

X0968s2

Human

2018-06-26

2018-06-29

2018-07-15

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were collected on the whole heteromeric complex. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010003 <br>
and use the following credentials to login: <br>
Username: reviewer91348@ebi.ac.uk<br>
Password: q9fEUNmI <p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-06-25

178.

X0968s1

Human

2018-06-26

2018-06-29

2018-07-15

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were collected on the whole heteromeric complex. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010003 <br>
and use the following credentials to login: <br>
Username: reviewer91348@ebi.ac.uk<br>
Password: q9fEUNmI <p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-06-25

179.

X0981

Human

2018-07-17

2018-07-20

2018-08-07

Protein: gp146
Organism: Staphylococcal bacteriophage K
Target list Comment:

This is a cross-linking assisted modeling target. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010384 <br>
and use the following credentials to login: <br>
Username: reviewer66164@ebi.ac.uk <br>
Password: S5U0kqOw<p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-07-15

180.

X0987

Human

2018-07-23

2018-07-26

2018-08-07

Protein: Enterococcal surface protein
Organism: Enterococcus faecalis
Target list Comment:

This is a cross-linking assisted modeling target. <br>
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. <p>
To access raw XL-MS data for this target (whole complex), please go to 
https://www.ebi.ac.uk/pride/archive/projects/PXD010410 <br>
and use the following credentials to login: <br>
Username:  reviewer33138@ebi.ac.uk <br>
Password:  0bvme2ld<p>
Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf

2018-07-15

181.

x0987

Human

2018-08-07

2018-08-10

2018-08-22

Protein: Enterococcal surface protein
Organism: Enterococcus faecalis
Target list Comment:

This is a cross-linking assisted modeling target. The experimental data were acquired by J.Rappsilber's group and posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0987_Berlin.csv.
<p>
Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.
<p>
The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.<p>
To access raw XL-MS data for this target, please go to https://www.ebi.ac.uk/pride/archive/projects/
and use the following credentials to login:
Project accession: PXD010884
Username:  reviewer91980@ebi.ac.uk
Password: Ow22Vk9d

2018-07-25

182.

x0968s1

Human

2018-07-16

2018-07-19

2018-08-02

Protein: B5Y0C2
Organism: Klebsiella pneumoniae 342
Target list Comment:

This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0968_Berlin.csv. <p>
Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.<p>
The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.<p>
To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/
and use the following credentials to login:
Project accession: PXD010884
Username:  reviewer91980@ebi.ac.uk
Password: Ow22Vk9d

2018-07-15

183.

A0953s2

Human

2018-07-02

2018-07-05

2018-07-23

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

2018-09-06

184.

A0953s1

Human

2018-07-02

2018-07-05

2018-07-23

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

2018-09-06

185.

x0957s2

Human

2018-07-05

2018-07-08

2018-07-25

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0957_Berlin.csv. <p>
Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.<p>
The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.<p>
To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/
and use the following credentials to login:
Project accession: PXD010884
Username:  reviewer91980@ebi.ac.uk
Password: Ow22Vk9d

2018-07-05

186.

H0974 *

Human

2018-05-25

2018-05-28

2018-06-15

Protein: O48503/O48504
Organism:
Target list Comment:

2018-05-22

187.

F0964

Human

2018-08-10

2018-08-13

2018-09-30

Protein: CBM56
Organism: Bacillus circulans
Target list Comment:

This is a FRET data-assisted modeling target. <br>
This data type is new in CASP. Results will not be competitively assessed in CASP13. Rather, with this target we are initiating a discussion and allowing for a learning experience with the development of future FRET-based modeling techniques in mind. We are providing ample time to model this target with the closing date of September 30 (pending approval from the structure's author).<br> 
The molecule’s two domains seem open to homology modeling but the relative domain orientation is not known (we have the structure of only the second of the two domains starting with the residues VIVIGDE). The FRET data suggest that there may be a distribution of domain orientations, opening a challenge of dynamic modeling in CASP. This topic will be discussed at the CASP13 meeting. <p>
The description of the FRET data and an overview of the results for this particular target can be found at http://predictioncenter.org/casp13/doc/FRET_CASP13_AGSeidel.pdf .<br>
The detailed FRET data will be released progressively as they become available.

2018-08-10

188.

S0953

Human

2018-05-29

2018-06-01

2018-06-12

Protein: Adhesin tip
Organism: Salmonella phage vB_SenMS16
Target list Comment:

This is a SAXS-assisted target. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-05-22

189.

S0957

Human

2018-05-31

2018-06-03

2018-06-14

Protein: CdiA_CdiI-CPX200209
Organism: Escherichia coli 3006
Target list Comment:

This is a SAXS-assisted target. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html

2018-05-29

190.

H0993 *

Human

2018-06-15

2018-06-18

2018-07-06

Protein: MlaFA
Organism: E. coli
Target list Comment:

2018-06-13

191.

T0959

Human

2018-05-10

2018-05-15

2018-06-05

Protein: Endolysin ARW58837.1
Organism: Erwinia phage vB_EamM_Y3
Target list Comment:

2018-04-30

192.

T0954

Human

2018-05-07

2018-05-13

2018-05-28

Protein: RFWD3_HUMAN
Organism: Homo Sapiens
Target list Comment:

6cvz

2018-04-30

193.

T0975

Human

2018-05-29

2018-06-01

2018-06-19

Protein: EXO5
Organism: Human
Target list Comment:

2018-05-29

194.

T0960

Human

2018-05-11

2018-05-16

2018-06-05

Protein: PALES_06171
Organism:
Target list Comment:

2018-05-03

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