 
PFRMAT AL 
TARGET T0051 
AUTHOR 8120-3487-1357 
REMARK Matrix Used: BS_30_25%  
REMARK Alignment Method Used: Quasi-Global Dynamic Programming 
METHOD Sequence-Structure alignment based on the environments 
METHOD published in: Deerfield, Holland-Minkley, Geigel, and  
METHOD Nicholas 1997. "Classification of the Environment of  
METHOD Protein Residues" J. Prot. Chem. 16:441-446. 
METHOD  
METHOD This test uses our latest (unpublished) environment  
METHOD classifications and extentions. 
MODEL  2 
PARENT 2aac_A 
M    1 G  118 
E    2 F  119 
L    3 F  120 
K    4 R  121 
N    5 P  122 
K    6 D  123 
K    7 E  124 
W    8 A  125 
T    9 H  126 
D   10 Q  127 
E   11 P  128 
E   12 H  129 
F   13 F  130 
H   14 S  131 
K   15 D  132 
Q   16 L  133 
R   17 F  134 
E   18 G  135 
E   19 Q  136 
V   20 I  137 
L   21 I  138 
Q   22 N  139 
Q   23 A  140 
W   24 G  141 
P   25 Q  142 
T   26 G  143 
G   27 E  144 
K   28 G  145 
E   29 R  146 
V   30 Y  147 
D   31 S  148 
L   32 E  149 
Q   33 L  150 
E   34 L  151 
A   35 A  152 
V   36 I  153 
D   37 N  154 
Y   38 L  155 
L   39 L  156 
K   40 E  157 
K   41 Q  158 
I   42 L  159 
P   43 L  160 
A   44 L  161 
E   45 R  162 
K   46 R  163 
N   47 M  164 
F   48 E  165 
A   49 A  166 
E   50 I  167 
K   51 N  168 
TER 
END 
