PFRMAT AL 
TARGET T0051 
AUTHOR 7169-6295-1599 
METHOD The smaller component of GLM (GLMS; T0050) has apparent homology to  
METHOD the C-terminal domain of 1req structure. Inspired by this fact, we  
METHOD suspected that the N-terminal domain of 1req was a potential candidate  
METHOD for the compatible structure of GLME (T0051). Although their  
METHOD compatibility was not significant, it was relatively high in the 
METHOD forward folding search (the runner-up). In the inverse folding search  
METHOD with 1reqB structure, T0051 and its homologous sequences (SP| P80077 and  
METHOD Q05509) show the compatibility next to 1reqA sequence among the sequence  
METHOD database. These results strongly support our hypothesis. 
MODEL 1 
PARENT 1req_B 
M 1 L 23 
E 2 A 24 
L 3 G 25 
K 4 D 26 
N 5 F 27 
K 6 P 28 
K 7 K 29 
W 8 A 30 
T 9 T 31 
D 10 E 32 
E 11 E 33 
E 12 Q 34 
F 13 W 35 
H 14 E 36 
K 15 R 37 
Q 16 E 38 
R 17 V 39 
E 18 E 40 
E 19 K 41 
V 20 V 42 
L 21 L 43 
Q 22 N 44 
Q 23 R 45 
W 24 R 47 
P 25 P 48 
T 26 P 49 
G 27 E 50 
K 28 K 51 
E 29 Q 52 
V 30 L 53 
D 31 T 54 
L 32 F 55 
Q 33 A 56 
E 34 E 57 
A 35 C 58 
V 36 L 59 
D 37 K 60 
N 47 R 61 
F 48 L 62 
A 49 T 63 
E 50 V 64 
K 51 H 65 
L 52 T 66 
V 53 V 67 
L 54 D 68 
A 55 G 69 
K 56 I 70 
K 57 D 71 
K 58 I 72 
G 59 V 73 
I 60 P 74 
T 61 M 75 
M 62 Y 76 
A 63 R 77 
Q 64 P 78 
P 65 K 79 
R 66 D 80 
A 67 A 81 
G 68 P 82 
V 69 K 83 
A 70 K 84 
L 71 L 85 
L 72 G 86 
D 73 Y 87 
E 74 P 88 
H 75 G 89 
I 76 V 90 
E 77 A 91 
L 78 P 92 
L 79 F 93 
R 80 T 94 
Y 81 R 95 
L 82 G 96 
Q 83 T 97 
D 84 T 98 
E 85 V 99 
G 86 R 100 
G 87 N 101 
A 88 G 102 
D 89 D 103 
F 90 M 104 
L 91 D 105 
P 92 A 106 
S 93 W 107 
T 94 D 108 
I 95 V 109 
D 96 R 110 
A 97 A 111 
Y 98 L 112 
T 99 H 113 
R 100 E 114 
Q 101 D 115 
N 102 P 116 
R 103 D 117 
Y 104 E 118 
D 105 K 119 
E 106 F 120 
C 107 T 121 
E 108 R 122 
N 109 K 123 
G 110 A 124 
I 111 I 125 
K 112 L 126 
E 113 E 127 
S 114 G 128 
E 115 L 129 
K 116 E 130 
A 117 R 131 
G 118 G 132 
R 119 V 133 
S 120 T 134 
L 121 L 137 
L 122 L 138 
N 123 R 139 
G 124 V 140 
F 125 D 141 
P 126 P 142 
G 127 D 143 
N 129 A 144 
Y 130 I 145 
G 131 A 146 
V 132 P 147 
K 133 E 148 
G 134 H 149 
C 135 L 150 
R 136 D 151 
K 137 E 152 
V 138 V 153 
L 139 L 154 
E 140 S 155 
A 141 D 156 
V 142 V 157 
N 143 L 158 
L 144 L 159 
P 145 E 160 
L 146 V 166 
Q 147 F 167 
A 148 S 168 
R 149 R 169 
H 150 Y 170 
G 151 D 171 
T 152 Q 172 
P 153 G 173 
D 154 A 174 
S 155 A 175 
R 156 A 176 
L 157 A 178 
L 158 L 179 
A 159 V 180 
E 160 S 181 
I 161 V 182 
I 162 Y 183 
H 163 E 184 
A 164 R 185 
G 165 S 186 
G 166 D 187 
T 168 K 188 
S 169 P 189 
N 170 A 190 
E 171 K 191 
G 172 D 192 
G 173 L 193 
G 174 A 194 
I 175 L 195 
S 176 N 196 
Y 177 L 197 
N 178 G 209 
V 179 T 210 
P 180 E 211 
Y 181 P 212 
A 182 D 213 
K 183 L 214 
N 184 T 215 
T 186 V 216 
I 187 L 217 
E 188 G 218 
K 189 D 219 
S 190 W 220 
L 191 V 221 
L 192 R 222 
D 193 R 223 
W 194 L 224 
Q 195 A 225 
Y 196 K 226 
C 197 F 227 
D 198 S 228 
R 199 P 229 
L 200 D 230 
V 201 S 231 
G 202 R 232 
F 203 A 233 
Y 204 V 234 
E 205 T 235 
E 206 I 236 
Q 207 D 237 
G 208 A 238 
V 209 N 239 
H 210 I 240 
I 211 Y 241 
N 212 H 242 
R 213 N 243 
E 214 A 246 
P 215 G 247 
F 216 D 248 
G 217 V 249 
P 218 A 250 
L 219 E 251 
T 220 L 252 
G 221 A 253 
T 222 W 254 
L 223 A 255 
V 224 L 256 
P 225 A 257 
P 226 T 258 
S 227 G 259 
M 228 A 260 
S 229 E 261 
N 230 Y 262 
A 231 V 263 
V 232 R 264 
G 233 A 265 
I 234 L 266 
T 235 V 267 
E 236 E 268 
A 237 Q 269 
L 238 G 270 
L 239 F 271 
A 240 T 272 
A 241 A 273 
E 242 T 274 
Q 243 E 275 
G 244 A 276 
V 245 F 277 
K 246 D 278 
N 247 T 279 
I 248 I 280 
T 249 N 281 
V 250 F 282 
G 251 R 283 
Y 252 V 284 
G 253 T 285 
E 254 A 286 
C 255 T 287 
G 256 H 288 
N 257 D 289 
M 258 Q 290 
I 259 F 291 
Q 260 L 292 
D 261 T 293 
I 262 I 294 
A 263 A 295 
A 264 R 296 
L 265 L 297 
R 266 R 298 
C 267 A 299 
L 268 L 300 
E 269 R 301 
E 270 E 302 
Q 271 A 303 
T 272 W 304 
N 273 A 305 
E 274 R 306 
Y 275 I 307 
L 276 G 308 
K 277 E 309 
A 278 V 310 
Y 279 F 311 
G 280 G 312 
Y 281 V 313 
N 282 D 314 
D 283 E 315 
V 284 A 320 
F 285 R 321 
V 286 Q 322 
T 287 N 323 
T 288 A 324 
V 289 I 325 
F 290 T 326 
H 291 S 327 
Q 292 W 328 
W 293 R 329 
M 294 E 330 
G 295 L 331 
F 297 T 332 
P 298 R 333 
Q 299 E 334 
D 300 D 335 
E 301 P 336 
S 302 Y 337 
K 303 V 338 
A 304 N 339 
F 305 I 340 
G 306 L 341 
V 307 R 342 
I 308 G 343 
V 309 S 344 
T 310 I 345 
A 311 A 346 
T 312 T 347 
T 313 F 348 
I 314 S 349 
A 315 A 350 
A 316 S 351 
L 317 V 352 
A 318 G 353 
G 319 G 354 
A 320 A 355 
T 321 E 356 
K 322 S 357 
V 323 I 358 
I 324 T 359 
V 325 T 360 
K 326 L 361 
T 327 P 362 
P 328 F 363 
H 329 T 364 
E 330 Q 365 
A 331 A 366 
I 332 L 367 
G 333 G 368 
I 334 L 369 
P 335 P 370 
T 336 E 371 
K 337 D 372 
N 340 D 373 
A 341 F 374 
A 342 P 375 
G 343 L 376 
I 344 R 377 
K 345 I 378 
A 346 A 379 
T 347 R 380 
K 348 N 381 
M 349 T 382 
A 350 G 383 
L 351 I 384 
N 352 V 385 
M 353 L 386 
L 354 A 387 
E 355 E 388 
G 356 E 389 
Q 357 V 390 
R 358 N 391 
M 359 I 392 
P 360 G 393 
M 361 R 394 
S 362 V 395 
K 363 N 396 
E 364 D 397 
L 365 P 398 
E 366 A 399 
T 367 G 400 
E 368 G 401 
M 369 S 402 
A 370 Y 403 
V 371 Y 404 
I 372 V 405 
K 373 E 406 
A 374 S 407 
E 375 L 408 
T 376 T 409 
K 377 R 410 
C 378 S 411 
I 379 L 412 
L 380 A 413 
D 381 D 414 
K 382 A 415 
M 383 A 416 
F 384 W 417 
E 385 K 418 
L 386 E 419 
G 387 F 420 
K 388 Q 421 
G 389 E 422 
D 390 V 423 
L 391 E 424 
A 392 K 425 
I 393 L 426 
G 394 G 427 
T 395 G 428 
V 396 M 429 
K 397 S 430 
A 398 K 431 
F 399 A 432 
E 400 V 433 
T 401 M 434 
G 402 T 435 
V 403 E 436 
D 405 H 437 
I 406 V 438 
P 407 T 439 
F 408 K 440 
G 409 V 441 
P 410 L 442 
S 411 D 443 
K 412 A 444 
Y 413 C 445 
N 414 N 446 
A 415 A 447 
G 416 E 448 
K 417 R 449 
M 418 A 450 
M 419 K 451 
P 420 R 452 
V 421 L 453 
R 422 A 454 
D 423 N 455 
N 424 R 456 
L 425 K 457 
G 426 Q 458 
C 427 P 459 
V 428 I 460 
R 429 T 461 
Y 430 A 462 
L 431 V 463 
E 432 S 464 
F 433 E 465 
G 434 F 466 
N 435 P 467 
V 436 M 468 
P 437 I 469 
F 438 G 470 
T 439 A 471 
E 440 R 472 
E 441 S 473 
I 442 I 474 
K 443 E 475 
N 444 T 476 
Y 445 K 477 
N 446 P 478 
R 447 F 479 
E 448 P 480 
R 449 A 481 
L 450 A 482 
Q 451 P 483 
E 452 A 484 
R 453 R 485 
A 454 K 486 
K 455 A 489 
F 456 W 490 
E 457 H 491 
G 458 R 492 
R 459 D 493 
D 460 S 494 
V 461 E 495 
S 462 V 496 
F 463 F 497 
Q 464 E 498 
M 465 Q 499 
V 466 L 500 
I 467 M 501 
D 468 D 502 
D 469 R 503 
I 470 S 504 
F 471 T 505 
A 472 S 506 
V 473 V 507 
G 474 P 511 
K 475 K 512 
G 476 V 513 
R 477 F 514 
L 478 L 515 
I 479 A 516 
G 480 C 517 
R 481 L 518 
P 482 G 519 
E 483 T 520 
TER 
END 
