 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 2801 atoms, 2603 common with TARGET 
           Number of atoms possible to evaluate: 2007 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    86.01           41.5   776    79.1   981     ARMSMC  
     WELL ORDERED  . . . . .    86.50           42.0   574    78.7   729     ARMSMC  
     NO INTER CONTACTS . . .    86.20           42.3   655    80.3   816     ARMSMC  
     SHIFTED CHAIN . . . . .    86.73           40.4   695    78.0   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    79.44           50.6   397    79.9   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    82.36           41.6   418    73.7   567     ARMSMC  
     LIGAND CONTACTS . . . .    31.16           50.0     4    40.0    10     ARMSMC  
     SURFACE . . . . . . . .    81.95           42.6   373    75.7   493     ARMSMC  
     BURIED  . . . . . . . .    89.61           40.4   403    82.6   488     ARMSMC  
     CORE  . . . . . . . . .    90.09           41.3   358    86.5   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   230     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   232     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.77088     r(1,2) =   0.38393     r(1,3) =   0.50827 
 r(2,1) =   0.60220     r(2,2) =   0.69933     r(2,3) =   0.38508 
 r(3,1) =  -0.20760     r(3,2) =   0.60294     r(3,3) =  -0.77030 
THE OFFSET VECTOR: 
 v(1) = -10.64898     v(2) = -47.51879     v(3) =  58.35059 
 
 Number of iteration 27                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.67           (Number of atoms:    4) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   24.66        411    83.4   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0600                            CRMSCA  
     WELL ORDERED  . . . . .   24.61        315    82.5   382     CRMSCA  
     NO INTER CONTACTS . . .   24.42        347    84.6   410     CRMSCA  
     SHIFTED CHAIN . . . . .   24.99        369    82.4   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   26.17        209    83.9   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS   24.42        226    79.0   286     CRMSCA  
     LIGAND CONTACTS . . . .   17.56          3    50.0     6     CRMSCA  
     SURFACE . . . . . . . .   26.36        196    79.0   248     CRMSCA  
     BURIED  . . . . . . . .   23.00        215    87.8   245     CRMSCA  
     CORE  . . . . . . . . .   24.94        185    89.4   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   24.66       2007    83.1  2415     CRMSMC  
     WELL ORDERED  . . . . .   24.46       1507    82.2  1834     CRMSMC  
     NO INTER CONTACTS . . .   24.40       1691    84.3  2005     CRMSMC  
     SHIFTED CHAIN . . . . .   24.97       1799    82.1  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   26.25       1027    83.5  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS   24.37       1102    78.7  1400     CRMSMC  
     LIGAND CONTACTS . . . .   16.29         15    57.7    26     CRMSMC  
     SURFACE . . . . . . . .   26.38        953    78.8  1209     CRMSMC  
     BURIED  . . . . . . . .   22.99       1054    87.4  1206     CRMSMC  
     CORE  . . . . . . . . .   25.00        905    89.2  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   24.73        363    22.4  1617     CRMSSC  
     WELL ORDERED  . . . . .   24.47        275    23.7  1162     CRMSSC  
     NO INTER CONTACTS . . .   24.32        303    23.6  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .   24.73        363    27.3  1329     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0  1058     CRMSSC  
     SECONDARY STRUCTURE . .   26.30        191    21.4   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS   24.59        198    20.6   960     CRMSSC  
     LIGAND CONTACTS . . . .   13.79          4    20.0    20     CRMSSC  
     SURFACE . . . . . . . .   26.90        169    19.4   869     CRMSSC  
     BURIED  . . . . . . . .   22.67        194    25.9   748     CRMSSC  
     CORE  . . . . . . . . .   24.90        165    25.1   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   24.66       2007    55.9  3589     CRMSALL 
     WELL ORDERED  . . . . .   24.46       1507    56.8  2655     CRMSALL 
     NO INTER CONTACTS . . .   24.40       1691    57.9  2923     CRMSALL 
     SHIFTED CHAIN . . . . .   24.97       1799    55.1  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   26.25       1027    54.4  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS   24.37       1102    52.4  2104     CRMSALL 
     LIGAND CONTACTS . . . .   16.29         15    36.6    41     CRMSALL 
     SURFACE . . . . . . . .   26.38        953    51.2  1861     CRMSALL 
     BURIED  . . . . . . . .   22.99       1054    61.0  1728     CRMSALL 
     CORE  . . . . . . . . .   25.00        905    60.9  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.00      0     0.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2    11.92      1    33.3     3      43-RLD-45   
 CA  LOOP  3    29.89      7    87.5     8      69-MMAGLTEE-76   
 CA  LOOP  4    26.16      5   100.0     5     111-TATAD-115  
 CA  LOOP  5    38.09      5   100.0     5     123-GFGGE-127  
 CA  LOOP  6    38.11     10    90.9    11     131-HGANFDEAKAK-141  
 CA  LOOP  7    30.31      3   100.0     3     149-QGF-151  
 CA  LOOP  8    31.29      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9    14.43     14    93.3    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10    11.63      4   100.0     4     236-GLFA-239  
 CA  LOOP 11    17.00     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12    32.23      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    23.17    149    81.0   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     0.00      0     0.0    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2    12.17      5    33.3    15      43-RLD-45   
 MC  LOOP  3    30.01     33    84.6    39      69-MMAGLTEE-76   
 MC  LOOP  4    26.22     25   100.0    25     111-TATAD-115  
 MC  LOOP  5    38.16     22   100.0    22     123-GFGGE-127  
 MC  LOOP  6    38.10     50    92.6    54     131-HGANFDEAKAK-141  
 MC  LOOP  7    29.83     14   100.0    14     149-QGF-151  
 MC  LOOP  8    31.19     25   100.0    25     202-QLMPQ-206  
 MC  LOOP  9    14.28     69    93.2    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10    12.09     19   100.0    19     236-GLFA-239  
 MC  LOOP 11    17.00     63    96.9    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12    32.11     29    96.7    30     300-IALHNI-305  
 MC  LOOP 13    23.14    729    80.9   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     0.00      0     0.0   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2    12.17      5    18.5    27      43-RLD-45   
 ALL LOOP  3    30.01     33    56.9    58      69-MMAGLTEE-76   
 ALL LOOP  4    26.22     25    78.1    32     111-TATAD-115  
 ALL LOOP  5    38.16     22    68.8    32     123-GFGGE-127  
 ALL LOOP  6    38.10     50    66.7    75     131-HGANFDEAKAK-141  
 ALL LOOP  7    29.83     14    58.3    24     149-QGF-151  
 ALL LOOP  8    31.19     25    61.0    41     202-QLMPQ-206  
 ALL LOOP  9    14.28     69    71.1    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10    12.09     19   100.0    19     236-GLFA-239  
 ALL LOOP 11    17.00     63    62.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12    32.11     29    61.7    47     300-IALHNI-305  
 ALL LOOP 13    23.14    729    52.9  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 CA  LOOP  3     2.41      7    87.5     8      69-MMAGLTEE-76   
 CA  LOOP  4     2.22      5   100.0     5     111-TATAD-115  
 CA  LOOP  5     2.43      5   100.0     5     123-GFGGE-127  
 CA  LOOP  6     3.64     10    90.9    11     131-HGANFDEAKAK-141  
 CA  LOOP  7     0.15      3   100.0     3     149-QGF-151  
 CA  LOOP  8     0.87      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9     3.64     14    93.3    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     1.95      4   100.0     4     236-GLFA-239  
 CA  LOOP 11     4.13     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     1.75      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    18.36    149    81.0   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 MC  LOOP  3     2.35     33    84.6    39      69-MMAGLTEE-76   
 MC  LOOP  4     2.66     25   100.0    25     111-TATAD-115  
 MC  LOOP  5     3.22     22   100.0    22     123-GFGGE-127  
 MC  LOOP  6     3.70     50    92.6    54     131-HGANFDEAKAK-141  
 MC  LOOP  7     1.63     14   100.0    14     149-QGF-151  
 MC  LOOP  8     1.07     25   100.0    25     202-QLMPQ-206  
 MC  LOOP  9     3.78     69    93.2    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     2.48     19   100.0    19     236-GLFA-239  
 MC  LOOP 11     4.17     63    96.9    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     1.82     29    96.7    30     300-IALHNI-305  
 MC  LOOP 13    18.38    729    80.9   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 ALL LOOP  3     2.35     33    56.9    58      69-MMAGLTEE-76   
 ALL LOOP  4     2.66     25    78.1    32     111-TATAD-115  
 ALL LOOP  5     3.22     22    68.8    32     123-GFGGE-127  
 ALL LOOP  6     3.70     50    66.7    75     131-HGANFDEAKAK-141  
 ALL LOOP  7     1.63     14    58.3    24     149-QGF-151  
 ALL LOOP  8     1.07     25    61.0    41     202-QLMPQ-206  
 ALL LOOP  9     3.78     69    71.1    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     2.48     19   100.0    19     236-GLFA-239  
 ALL LOOP 11     4.17     63    62.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     1.82     29    61.7    47     300-IALHNI-305  
 ALL LOOP 13    18.38    729    52.9  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   22.619      1.000       0.500    411    83.4   493     ERRCA  
     WELL ORDERED  . . . . .   22.637      1.000       0.500    315    82.5   382     ERRCA  
     NO INTER CONTACTS . . .   22.477      1.000       0.500    347    84.6   410     ERRCA  
     SHIFTED CHAIN . . . . .   22.891      1.000       0.500    369    82.4   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   24.396      1.000       0.500    209    83.9   249     ERRCA  
     LARGE SHIFTS/INSERTIONS   22.335      1.000       0.500    226    79.0   286     ERRCA  
     LIGAND CONTACTS . . . .   15.552      1.000       0.500      3    50.0     6     ERRCA  
     SURFACE . . . . . . . .   24.322      1.000       0.500    196    79.0   248     ERRCA  
     BURIED  . . . . . . . .   21.067      1.000       0.500    215    87.8   245     ERRCA  
     CORE  . . . . . . . . .   22.966      1.000       0.500    185    89.4   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   22.619      1.000       0.500   2007    83.1  2415     ERRMC  
     WELL ORDERED  . . . . .   22.485      1.000       0.500   1507    82.2  1834     ERRMC  
     NO INTER CONTACTS . . .   22.446      1.000       0.500   1691    84.3  2005     ERRMC  
     SHIFTED CHAIN . . . . .   22.864      1.000       0.500   1799    82.1  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   24.469      1.000       0.500   1027    83.5  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS   22.294      1.000       0.500   1102    78.7  1400     ERRMC  
     LIGAND CONTACTS . . . .   14.505      1.000       0.500     15    57.7    26     ERRMC  
     SURFACE . . . . . . . .   24.331      1.000       0.500    953    78.8  1209     ERRMC  
     BURIED  . . . . . . . .   21.072      1.000       0.500   1054    87.4  1206     ERRMC  
     CORE  . . . . . . . . .   23.015      1.000       0.500    905    89.2  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   22.705      1.000       0.500    363    22.4  1617     ERRSC  
     WELL ORDERED  . . . . .   22.530      1.000       0.500    275    23.7  1162     ERRSC  
     NO INTER CONTACTS . . .   22.367      1.000       0.500    303    23.6  1283     ERRSC  
     RELIABLE SIDE CHAINS  .   22.705      1.000       0.500    363    27.3  1329     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0  1058     ERRSC  
     SHIFTED CHAIN . . . . .   23.006      1.000       0.500    323    21.9  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   24.492      1.000       0.500    191    21.4   891     ERRSC  
     LARGE SHIFTS/INSERTIONS   22.520      1.000       0.500    198    20.6   960     ERRSC  
     LIGAND CONTACTS . . . .   13.577      1.000       0.500      4    20.0    20     ERRSC  
     SURFACE . . . . . . . .   24.853      1.000       0.500    169    19.4   869     ERRSC  
     BURIED  . . . . . . . .   20.834      1.000       0.500    194    25.9   748     ERRSC  
     CORE  . . . . . . . . .   22.927      1.000       0.500    165    25.1   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   22.619      1.000       0.500   2007    55.9  3589     ERRALL 
     WELL ORDERED  . . . . .   22.485      1.000       0.500   1507    56.8  2655     ERRALL 
     NO INTER CONTACTS . . .   22.446      1.000       0.500   1691    57.9  2923     ERRALL 
     SHIFTED CHAIN . . . . .   22.864      1.000       0.500   1799    55.1  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   24.469      1.000       0.500   1027    54.4  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS   22.294      1.000       0.500   1102    52.4  2104     ERRALL 
     LIGAND CONTACTS . . . .   14.505      1.000       0.500     15    36.6    41     ERRALL 
     SURFACE . . . . . . . .   24.331      1.000       0.500    953    51.2  1861     ERRALL 
     BURIED  . . . . . . . .   21.072      1.000       0.500   1054    61.0  1728     ERRALL 
     CORE  . . . . . . . . .   23.015      1.000       0.500    905    60.9  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         1         2         4         8        46     411     493   DISTCA 
CA  (P)      0.20      0.41      0.81      1.62      9.33             493   DISTCA 
CA  (RMS)    0.88      1.15      1.67      3.38      7.41                   DISTCA 
 
ALL (N)         2         9        18        40       229    2007    3589   DISTALL 
ALL (P)      0.06      0.25      0.50      1.11      6.38            3589   DISTALL 
ALL (RMS)    0.79      1.28      1.92      3.44      7.45                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207           185           226          RMSLSI 
CA  (P)       41.99         37.53         45.84          RMSLSI 
CA  (RMS)      1.49         24.94         24.42          RMSLSI 
 
 
 
END of the results output 
