 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 2933 atoms, 2721 common with TARGET 
           Number of atoms possible to evaluate: 1817 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    89.03           39.3   694    70.7   981     ARMSMC  
     WELL ORDERED  . . . . .    88.25           41.0   541    74.2   729     ARMSMC  
     NO INTER CONTACTS . . .    88.70           39.9   606    74.3   816     ARMSMC  
     SHIFTED CHAIN . . . . .    88.51           39.9   627    70.4   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    85.56           46.4   362    72.8   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    88.50           37.2   341    60.1   567     ARMSMC  
     LIGAND CONTACTS . . . .   111.41           40.0    10   100.0    10     ARMSMC  
     SURFACE . . . . . . . .    90.99           39.4   330    66.9   493     ARMSMC  
     BURIED  . . . . . . . .    87.22           39.3   364    74.6   488     ARMSMC  
     CORE  . . . . . . . . .    89.55           41.4   353    85.3   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   230     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   232     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.05195     r(1,2) =   0.24324     r(1,3) =  -0.96857 
 r(2,1) =   0.83178     r(2,2) =   0.54728     r(2,3) =   0.09282 
 r(3,1) =   0.55266     r(3,2) =  -0.80082     r(3,3) =  -0.23076 
THE OFFSET VECTOR: 
 v(1) = -48.91277     v(2) =  39.05292     v(3) =  -9.77921 
 
 Number of iteration 29                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.36           (Number of atoms:    6) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   31.85        376    76.3   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0847                            CRMSCA  
     WELL ORDERED  . . . . .   33.18        306    80.1   382     CRMSCA  
     NO INTER CONTACTS . . .   32.28        327    79.8   410     CRMSCA  
     SHIFTED CHAIN . . . . .   32.06        339    75.7   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   33.04        196    78.7   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS   28.49        186    65.0   286     CRMSCA  
     LIGAND CONTACTS . . . .   13.95          6   100.0     6     CRMSCA  
     SURFACE . . . . . . . .   31.70        182    73.4   248     CRMSCA  
     BURIED  . . . . . . . .   32.00        194    79.2   245     CRMSCA  
     CORE  . . . . . . . . .   34.83        190    91.8   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   31.93       1817    75.2  2415     CRMSMC  
     WELL ORDERED  . . . . .   33.48       1445    78.8  1834     CRMSMC  
     NO INTER CONTACTS . . .   32.43       1574    78.5  2005     CRMSMC  
     SHIFTED CHAIN . . . . .   32.15       1635    74.6  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   33.13        956    77.7  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS   28.39        898    64.1  1400     CRMSMC  
     LIGAND CONTACTS . . . .   14.12         26   100.0    26     CRMSMC  
     SURFACE . . . . . . . .   31.68        881    72.9  1209     CRMSMC  
     BURIED  . . . . . . . .   32.16        936    77.6  1206     CRMSMC  
     CORE  . . . . . . . . .   35.05        919    90.5  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   32.02        313    19.4  1617     CRMSSC  
     WELL ORDERED  . . . . .   33.24        251    21.6  1162     CRMSSC  
     NO INTER CONTACTS . . .   32.76        266    20.7  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .   32.02        313    23.6  1329     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0  1058     CRMSSC  
     SECONDARY STRUCTURE . .   32.87        172    19.3   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS   27.72        154    16.0   960     CRMSSC  
     LIGAND CONTACTS . . . .   16.43          5    25.0    20     CRMSSC  
     SURFACE . . . . . . . .   31.70        153    17.6   869     CRMSSC  
     BURIED  . . . . . . . .   32.33        160    21.4   748     CRMSSC  
     CORE  . . . . . . . . .   35.70        159    24.2   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   31.93       1817    50.6  3589     CRMSALL 
     WELL ORDERED  . . . . .   33.48       1445    54.4  2655     CRMSALL 
     NO INTER CONTACTS . . .   32.43       1574    53.8  2923     CRMSALL 
     SHIFTED CHAIN . . . . .   32.15       1635    50.0  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   33.13        956    50.7  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS   28.39        898    42.7  2104     CRMSALL 
     LIGAND CONTACTS . . . .   14.12         26    63.4    41     CRMSALL 
     SURFACE . . . . . . . .   31.68        881    47.3  1861     CRMSALL 
     BURIED  . . . . . . . .   32.16        936    54.2  1728     CRMSALL 
     CORE  . . . . . . . . .   35.05        919    61.9  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    46.03     18    90.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2    61.70      3   100.0     3      43-RLD-45   
 CA  LOOP  3    38.17      8   100.0     8      69-MMAGLTEE-76   
 CA  LOOP  4    15.85      5   100.0     5     111-TATAD-115  
 CA  LOOP  5    28.21      4    80.0     5     123-GFGGE-127  
 CA  LOOP  6    21.14     10    90.9    11     131-HGANFDEAKAK-141  
 CA  LOOP  7    43.75      2    66.7     3     149-QGF-151  
 CA  LOOP  8    61.04      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9    29.36     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10    15.85      4   100.0     4     236-GLFA-239  
 CA  LOOP 11    15.38     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12    30.76      3    50.0     6     300-IALHNI-305  
 CA  LOOP 13    18.38     92    50.0   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    46.29     87    88.8    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2    61.72     14    93.3    15      43-RLD-45   
 MC  LOOP  3    38.12     39   100.0    39      69-MMAGLTEE-76   
 MC  LOOP  4    15.82     24    96.0    25     111-TATAD-115  
 MC  LOOP  5    28.13     18    81.8    22     123-GFGGE-127  
 MC  LOOP  6    21.54     49    90.7    54     131-HGANFDEAKAK-141  
 MC  LOOP  7    43.94      8    57.1    14     149-QGF-151  
 MC  LOOP  8    60.55     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9    29.26     71    95.9    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10    15.30     19   100.0    19     236-GLFA-239  
 MC  LOOP 11    15.38     64    98.5    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12    31.11     15    50.0    30     300-IALHNI-305  
 MC  LOOP 13    18.40    447    49.6   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    46.29     87    61.3   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2    61.72     14    51.9    27      43-RLD-45   
 ALL LOOP  3    38.12     39    67.2    58      69-MMAGLTEE-76   
 ALL LOOP  4    15.82     24    75.0    32     111-TATAD-115  
 ALL LOOP  5    28.13     18    56.2    32     123-GFGGE-127  
 ALL LOOP  6    21.54     49    65.3    75     131-HGANFDEAKAK-141  
 ALL LOOP  7    43.94      8    33.3    24     149-QGF-151  
 ALL LOOP  8    60.55     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9    29.26     71    73.2    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10    15.30     19   100.0    19     236-GLFA-239  
 ALL LOOP 11    15.38     64    63.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12    31.11     15    31.9    47     300-IALHNI-305  
 ALL LOOP 13    18.40    447    32.5  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     5.32     18    90.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2     0.05      3   100.0     3      43-RLD-45   
 CA  LOOP  3     2.11      8   100.0     8      69-MMAGLTEE-76   
 CA  LOOP  4     2.11      5   100.0     5     111-TATAD-115  
 CA  LOOP  5     1.39      4    80.0     5     123-GFGGE-127  
 CA  LOOP  6     3.99     10    90.9    11     131-HGANFDEAKAK-141  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 CA  LOOP  8     1.61      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9     4.83     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     0.59      4   100.0     4     236-GLFA-239  
 CA  LOOP 11     4.42     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     0.89      3    50.0     6     300-IALHNI-305  
 CA  LOOP 13    15.02     92    50.0   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     5.28     87    88.8    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2     0.36     14    93.3    15      43-RLD-45   
 MC  LOOP  3     2.08     39   100.0    39      69-MMAGLTEE-76   
 MC  LOOP  4     2.34     24    96.0    25     111-TATAD-115  
 MC  LOOP  5     2.19     18    81.8    22     123-GFGGE-127  
 MC  LOOP  6     4.12     49    90.7    54     131-HGANFDEAKAK-141  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 MC  LOOP  8     1.93     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9     5.12     71    95.9    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     1.42     19   100.0    19     236-GLFA-239  
 MC  LOOP 11     4.44     64    98.5    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     1.54     15    50.0    30     300-IALHNI-305  
 MC  LOOP 13    15.09    447    49.6   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     5.28     87    61.3   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2     0.36     14    51.9    27      43-RLD-45   
 ALL LOOP  3     2.08     39    67.2    58      69-MMAGLTEE-76   
 ALL LOOP  4     2.34     24    75.0    32     111-TATAD-115  
 ALL LOOP  5     2.19     18    56.2    32     123-GFGGE-127  
 ALL LOOP  6     4.12     49    65.3    75     131-HGANFDEAKAK-141  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 ALL LOOP  8     1.93     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9     5.12     71    73.2    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     1.42     19   100.0    19     236-GLFA-239  
 ALL LOOP 11     4.44     64    63.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     1.54     15    31.9    47     300-IALHNI-305  
 ALL LOOP 13    15.09    447    32.5  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   27.679      1.000       0.500    376    76.3   493     ERRCA  
     WELL ORDERED  . . . . .   28.625      1.000       0.500    306    80.1   382     ERRCA  
     NO INTER CONTACTS . . .   28.113      1.000       0.500    327    79.8   410     ERRCA  
     SHIFTED CHAIN . . . . .   27.873      1.000       0.500    339    75.7   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   27.906      1.000       0.500    196    78.7   249     ERRCA  
     LARGE SHIFTS/INSERTIONS   24.844      1.000       0.500    186    65.0   286     ERRCA  
     LIGAND CONTACTS . . . .   13.059      1.000       0.500      6   100.0     6     ERRCA  
     SURFACE . . . . . . . .   27.998      1.000       0.500    182    73.4   248     ERRCA  
     BURIED  . . . . . . . .   27.380      1.000       0.500    194    79.2   245     ERRCA  
     CORE  . . . . . . . . .   30.455      1.000       0.500    190    91.8   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   27.733      1.000       0.500   1817    75.2  2415     ERRMC  
     WELL ORDERED  . . . . .   28.907      1.000       0.500   1445    78.8  1834     ERRMC  
     NO INTER CONTACTS . . .   28.235      1.000       0.500   1574    78.5  2005     ERRMC  
     SHIFTED CHAIN . . . . .   27.944      1.000       0.500   1635    74.6  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   27.988      1.000       0.500    956    77.7  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS   24.746      1.000       0.500    898    64.1  1400     ERRMC  
     LIGAND CONTACTS . . . .   13.268      1.000       0.500     26   100.0    26     ERRMC  
     SURFACE . . . . . . . .   27.969      1.000       0.500    881    72.9  1209     ERRMC  
     BURIED  . . . . . . . .   27.511      1.000       0.500    936    77.6  1206     ERRMC  
     CORE  . . . . . . . . .   30.652      1.000       0.500    919    90.5  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   27.886      1.000       0.500    313    19.4  1617     ERRSC  
     WELL ORDERED  . . . . .   28.813      1.000       0.500    251    21.6  1162     ERRSC  
     NO INTER CONTACTS . . .   28.598      1.000       0.500    266    20.7  1283     ERRSC  
     RELIABLE SIDE CHAINS  .   27.886      1.000       0.500    313    23.6  1329     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0  1058     ERRSC  
     SHIFTED CHAIN . . . . .   28.147      1.000       0.500    279    18.9  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   27.808      1.000       0.500    172    19.3   891     ERRSC  
     LARGE SHIFTS/INSERTIONS   24.171      1.000       0.500    154    16.0   960     ERRSC  
     LIGAND CONTACTS . . . .   15.779      1.000       0.500      5    25.0    20     ERRSC  
     SURFACE . . . . . . . .   28.013      1.000       0.500    153    17.6   869     ERRSC  
     BURIED  . . . . . . . .   27.765      1.000       0.500    160    21.4   748     ERRSC  
     CORE  . . . . . . . . .   31.484      1.000       0.500    159    24.2   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   27.733      1.000       0.500   1817    50.6  3589     ERRALL 
     WELL ORDERED  . . . . .   28.907      1.000       0.500   1445    54.4  2655     ERRALL 
     NO INTER CONTACTS . . .   28.235      1.000       0.500   1574    53.8  2923     ERRALL 
     SHIFTED CHAIN . . . . .   27.944      1.000       0.500   1635    50.0  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   27.988      1.000       0.500    956    50.7  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS   24.746      1.000       0.500    898    42.7  2104     ERRALL 
     LIGAND CONTACTS . . . .   13.268      1.000       0.500     26    63.4    41     ERRALL 
     SURFACE . . . . . . . .   27.969      1.000       0.500    881    47.3  1861     ERRALL 
     BURIED  . . . . . . . .   27.511      1.000       0.500    936    54.2  1728     ERRALL 
     CORE  . . . . . . . . .   30.652      1.000       0.500    919    61.9  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         3         5         7        15        36     376     493   DISTCA 
CA  (P)      0.61      1.01      1.42      3.04      7.30             493   DISTCA 
CA  (RMS)    0.66      1.16      1.69      3.23      6.21                   DISTCA 
 
ALL (N)         4        19        38        72       186    1817    3589   DISTALL 
ALL (P)      0.11      0.53      1.06      2.01      5.18            3589   DISTALL 
ALL (RMS)    0.75      1.47      2.13      3.14      6.48                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207           190           186          RMSLSI 
CA  (P)       41.99         38.54         37.73          RMSLSI 
CA  (RMS)      1.49         34.83         28.49          RMSLSI 
 
 
 
END of the results output 
