 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 3432 atoms, 3150 common with TARGET 
           Number of atoms possible to evaluate: 942 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.82           55.6   378    38.5   981     ARMSMC  
     WELL ORDERED  . . . . .    68.24           58.4   332    45.5   729     ARMSMC  
     NO INTER CONTACTS . . .    72.92           53.4   320    39.2   816     ARMSMC  
     SHIFTED CHAIN . . . . .    72.58           54.2   330    37.0   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    55.69           68.5   197    39.6   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    70.23           57.7   156    27.5   567     ARMSMC  
     LIGAND CONTACTS . . . .    68.98           50.0    10   100.0    10     ARMSMC  
     SURFACE . . . . . . . .    72.47           54.3   162    32.9   493     ARMSMC  
     BURIED  . . . . . . . .    69.55           56.5   216    44.3   488     ARMSMC  
     CORE  . . . . . . . . .    71.23           54.1   222    53.6   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   230     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   232     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.31681     r(1,2) =   0.94654     r(1,3) =  -0.06068 
 r(2,1) =   0.07168     r(2,2) =   0.08769     r(2,3) =   0.99357 
 r(3,1) =   0.94577     r(3,2) =   0.31043     r(3,3) =  -0.09563 
THE OFFSET VECTOR: 
 v(1) = -78.56181     v(2) = -48.03115     v(3) = -43.92196 
 
 Number of iteration 23                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.78           (Number of atoms:   13) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   20.48        195    39.6   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1050                            CRMSCA  
     WELL ORDERED  . . . . .   17.38        175    45.8   382     CRMSCA  
     NO INTER CONTACTS . . .   20.55        166    40.5   410     CRMSCA  
     SHIFTED CHAIN . . . . .   20.84        170    37.9   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   19.53        100    40.2   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS   24.85         80    28.0   286     CRMSCA  
     LIGAND CONTACTS . . . .   11.98          6   100.0     6     CRMSCA  
     SURFACE . . . . . . . .   22.26         84    33.9   248     CRMSCA  
     BURIED  . . . . . . . .   19.03        111    45.3   245     CRMSCA  
     CORE  . . . . . . . . .   16.78        115    55.6   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   20.50        942    39.0  2415     CRMSMC  
     WELL ORDERED  . . . . .   17.64        837    45.6  1834     CRMSMC  
     NO INTER CONTACTS . . .   20.53        797    39.8  2005     CRMSMC  
     SHIFTED CHAIN . . . . .   20.87        819    37.4  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   19.49        484    39.3  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS   24.88        387    27.6  1400     CRMSMC  
     LIGAND CONTACTS . . . .   13.32         26   100.0    26     CRMSMC  
     SURFACE . . . . . . . .   22.38        405    33.5  1209     CRMSMC  
     BURIED  . . . . . . . .   18.97        537    44.5  1206     CRMSMC  
     CORE  . . . . . . . . .   16.79        555    54.7  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   20.71        162    10.0  1617     CRMSSC  
     WELL ORDERED  . . . . .   17.88        141    12.1  1162     CRMSSC  
     NO INTER CONTACTS . . .   20.76        133    10.4  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .   20.71        162    12.2  1329     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0  1058     CRMSSC  
     SECONDARY STRUCTURE . .   19.24         84     9.4   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS   25.03         67     7.0   960     CRMSSC  
     LIGAND CONTACTS . . . .   18.54          5    25.0    20     CRMSSC  
     SURFACE . . . . . . . .   23.32         69     7.9   869     CRMSSC  
     BURIED  . . . . . . . .   18.54         93    12.4   748     CRMSSC  
     CORE  . . . . . . . . .   17.01         95    14.5   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   20.50        942    26.2  3589     CRMSALL 
     WELL ORDERED  . . . . .   17.64        837    31.5  2655     CRMSALL 
     NO INTER CONTACTS . . .   20.53        797    27.3  2923     CRMSALL 
     SHIFTED CHAIN . . . . .   20.87        819    25.1  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   19.49        484    25.6  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS   24.88        387    18.4  2104     CRMSALL 
     LIGAND CONTACTS . . . .   13.32         26    63.4    41     CRMSALL 
     SURFACE . . . . . . . .   22.38        405    21.8  1861     CRMSALL 
     BURIED  . . . . . . . .   18.97        537    31.1  1728     CRMSALL 
     CORE  . . . . . . . . .   16.79        555    37.4  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.00      0     0.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2     0.00      0     0.0     3      43-RLD-45   
 CA  LOOP  3     0.00      0     0.0     8      69-MMAGLTEE-76   
 CA  LOOP  4     0.00      0     0.0     5     111-TATAD-115  
 CA  LOOP  5     0.00      0     0.0     5     123-GFGGE-127  
 CA  LOOP  6     0.00      0     0.0    11     131-HGANFDEAKAK-141  
 CA  LOOP  7    12.03      1    33.3     3     149-QGF-151  
 CA  LOOP  8     5.44      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9    12.97     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10    20.35      4   100.0     4     236-GLFA-239  
 CA  LOOP 11    19.69     12    92.3    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12    12.87      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    33.44     34    18.5   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     0.00      0     0.0    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2     0.00      0     0.0    15      43-RLD-45   
 MC  LOOP  3     0.00      0     0.0    39      69-MMAGLTEE-76   
 MC  LOOP  4     0.00      0     0.0    25     111-TATAD-115  
 MC  LOOP  5     0.00      0     0.0    22     123-GFGGE-127  
 MC  LOOP  6     0.00      0     0.0    54     131-HGANFDEAKAK-141  
 MC  LOOP  7    11.21      4    28.6    14     149-QGF-151  
 MC  LOOP  8     5.55     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9    13.51     73    98.6    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10    20.17     18    94.7    19     236-GLFA-239  
 MC  LOOP 11    19.61     59    90.8    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12    12.98     30   100.0    30     300-IALHNI-305  
 MC  LOOP 13    33.39    165    18.3   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     0.00      0     0.0   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2     0.00      0     0.0    27      43-RLD-45   
 ALL LOOP  3     0.00      0     0.0    58      69-MMAGLTEE-76   
 ALL LOOP  4     0.00      0     0.0    32     111-TATAD-115  
 ALL LOOP  5     0.00      0     0.0    32     123-GFGGE-127  
 ALL LOOP  6     0.00      0     0.0    75     131-HGANFDEAKAK-141  
 ALL LOOP  7    11.21      4    16.7    24     149-QGF-151  
 ALL LOOP  8     5.55     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9    13.51     73    75.3    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10    20.17     18    94.7    19     236-GLFA-239  
 ALL LOOP 11    19.61     59    58.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12    12.98     30    63.8    47     300-IALHNI-305  
 ALL LOOP 13    33.39    165    12.0  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  6 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 CA  LOOP  8     2.09      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9     5.39     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     1.00      4   100.0     4     236-GLFA-239  
 CA  LOOP 11     2.84     12    92.3    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     1.24      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    13.41     34    18.5   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  6 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 MC  LOOP  8     2.62     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9     5.52     73    98.6    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     1.55     18    94.7    19     236-GLFA-239  
 MC  LOOP 11     2.84     59    90.8    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     1.78     30   100.0    30     300-IALHNI-305  
 MC  LOOP 13    13.39    165    18.3   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  6 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 ALL LOOP  8     2.62     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9     5.52     73    75.3    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     1.55     18    94.7    19     236-GLFA-239  
 ALL LOOP 11     2.84     59    58.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     1.78     30    63.8    47     300-IALHNI-305  
 ALL LOOP 13    13.39    165    12.0  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   16.847      1.000       0.500    195    39.6   493     ERRCA  
     WELL ORDERED  . . . . .   14.915      1.000       0.500    175    45.8   382     ERRCA  
     NO INTER CONTACTS . . .   16.607      1.000       0.500    166    40.5   410     ERRCA  
     SHIFTED CHAIN . . . . .   17.081      1.000       0.500    170    37.9   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   16.175      1.000       0.500    100    40.2   249     ERRCA  
     LARGE SHIFTS/INSERTIONS   20.535      1.000       0.500     80    28.0   286     ERRCA  
     LIGAND CONTACTS . . . .   11.612      1.000       0.500      6   100.0     6     ERRCA  
     SURFACE . . . . . . . .   18.004      1.000       0.500     84    33.9   248     ERRCA  
     BURIED  . . . . . . . .   15.972      1.000       0.500    111    45.3   245     ERRCA  
     CORE  . . . . . . . . .   14.282      1.000       0.500    115    55.6   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   16.864      1.000       0.500    942    39.0  2415     ERRMC  
     WELL ORDERED  . . . . .   15.053      1.000       0.500    837    45.6  1834     ERRMC  
     NO INTER CONTACTS . . .   16.583      1.000       0.500    797    39.8  2005     ERRMC  
     SHIFTED CHAIN . . . . .   17.107      1.000       0.500    819    37.4  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   16.112      1.000       0.500    484    39.3  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS   20.600      1.000       0.500    387    27.6  1400     ERRMC  
     LIGAND CONTACTS . . . .   12.602      1.000       0.500     26   100.0    26     ERRMC  
     SURFACE . . . . . . . .   18.147      1.000       0.500    405    33.5  1209     ERRMC  
     BURIED  . . . . . . . .   15.897      1.000       0.500    537    44.5  1206     ERRMC  
     CORE  . . . . . . . . .   14.259      1.000       0.500    555    54.7  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   17.142      1.000       0.500    162    10.0  1617     ERRSC  
     WELL ORDERED  . . . . .   15.307      1.000       0.500    141    12.1  1162     ERRSC  
     NO INTER CONTACTS . . .   16.825      1.000       0.500    133    10.4  1283     ERRSC  
     RELIABLE SIDE CHAINS  .   17.142      1.000       0.500    162    12.2  1329     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0  1058     ERRSC  
     SHIFTED CHAIN . . . . .   17.417      1.000       0.500    139     9.4  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   15.887      1.000       0.500     84     9.4   891     ERRSC  
     LARGE SHIFTS/INSERTIONS   21.147      1.000       0.500     67     7.0   960     ERRSC  
     LIGAND CONTACTS . . . .   17.537      1.000       0.500      5    25.0    20     ERRSC  
     SURFACE . . . . . . . .   19.347      1.000       0.500     69     7.9   869     ERRSC  
     BURIED  . . . . . . . .   15.506      1.000       0.500     93    12.4   748     ERRSC  
     CORE  . . . . . . . . .   14.317      1.000       0.500     95    14.5   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   16.864      1.000       0.500    942    26.2  3589     ERRALL 
     WELL ORDERED  . . . . .   15.053      1.000       0.500    837    31.5  2655     ERRALL 
     NO INTER CONTACTS . . .   16.583      1.000       0.500    797    27.3  2923     ERRALL 
     SHIFTED CHAIN . . . . .   17.107      1.000       0.500    819    25.1  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   16.112      1.000       0.500    484    25.6  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS   20.600      1.000       0.500    387    18.4  2104     ERRALL 
     LIGAND CONTACTS . . . .   12.602      1.000       0.500     26    63.4    41     ERRALL 
     SURFACE . . . . . . . .   18.147      1.000       0.500    405    21.8  1861     ERRALL 
     BURIED  . . . . . . . .   15.897      1.000       0.500    537    31.1  1728     ERRALL 
     CORE  . . . . . . . . .   14.259      1.000       0.500    555    37.4  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         9        14        22        63     195     493   DISTCA 
CA  (P)      0.00      1.83      2.84      4.46     12.78             493   DISTCA 
CA  (RMS)    0.00      1.59      1.85      2.87      6.50                   DISTCA 
 
ALL (N)         5        35        63       107       302     942    3589   DISTALL 
ALL (P)      0.14      0.98      1.76      2.98      8.41            3589   DISTALL 
ALL (RMS)    0.69      1.52      2.01      3.03      6.43                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207           115            80          RMSLSI 
CA  (P)       41.99         23.33         16.23          RMSLSI 
CA  (RMS)      1.49         16.78         24.85          RMSLSI 
 
 
 
END of the results output 
