 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 2844 atoms, 2656 common with TARGET 
           Number of atoms possible to evaluate: 1896 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    74.27           50.1   780    79.5   981     ARMSMC  
     WELL ORDERED  . . . . .    70.28           55.1   559    76.7   729     ARMSMC  
     NO INTER CONTACTS . . .    75.38           50.8   648    79.4   816     ARMSMC  
     SHIFTED CHAIN . . . . .    75.70           48.0   710    79.7   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    54.19           69.6   385    77.5   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    77.09           43.4   445    78.5   567     ARMSMC  
     LIGAND CONTACTS . . . .   112.92           10.0    10   100.0    10     ARMSMC  
     SURFACE . . . . . . . .    78.99           41.1   389    78.9   493     ARMSMC  
     BURIED  . . . . . . . .    69.26           59.1   391    80.1   488     ARMSMC  
     CORE  . . . . . . . . .    70.35           59.1   335    80.9   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   230     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   232     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.04842     r(1,2) =   0.20384     r(1,3) =  -0.97781 
 r(2,1) =   0.10399     r(2,2) =  -0.97261     r(2,3) =  -0.20790 
 r(3,1) =  -0.99340     r(3,2) =  -0.11175     r(3,3) =   0.02590 
THE OFFSET VECTOR: 
 v(1) =  -0.02722     v(2) =  37.77981     v(3) =  52.36274 
 
 Number of iteration 30                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.74           (Number of atoms:    8) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   19.21        394    79.9   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0488                            CRMSCA  
     WELL ORDERED  . . . . .   18.25        297    77.7   382     CRMSCA  
     NO INTER CONTACTS . . .   18.74        327    79.8   410     CRMSCA  
     SHIFTED CHAIN . . . . .   19.20        359    80.1   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   17.48        194    77.9   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS   20.06        226    79.0   286     CRMSCA  
     LIGAND CONTACTS . . . .    7.92          6   100.0     6     CRMSCA  
     SURFACE . . . . . . . .   20.21        197    79.4   248     CRMSCA  
     BURIED  . . . . . . . .   18.16        197    80.4   245     CRMSCA  
     CORE  . . . . . . . . .   18.01        168    81.2   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   19.20       1896    78.5  2415     CRMSMC  
     WELL ORDERED  . . . . .   18.33       1395    76.1  1834     CRMSMC  
     NO INTER CONTACTS . . .   18.69       1569    78.3  2005     CRMSMC  
     SHIFTED CHAIN . . . . .   19.18       1726    78.7  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   17.44        940    76.4  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS   20.05       1089    77.8  1400     CRMSMC  
     LIGAND CONTACTS . . . .    8.94         26   100.0    26     CRMSMC  
     SURFACE . . . . . . . .   20.20        944    78.1  1209     CRMSMC  
     BURIED  . . . . . . . .   18.15        952    78.9  1206     CRMSMC  
     CORE  . . . . . . . . .   17.99        807    79.5  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   19.58        320    19.8  1617     CRMSSC  
     WELL ORDERED  . . . . .   18.75        241    20.7  1162     CRMSSC  
     NO INTER CONTACTS . . .   18.95        261    20.3  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .   19.58        320    24.1  1329     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0  1058     CRMSSC  
     SECONDARY STRUCTURE . .   17.74        164    18.4   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS   20.46        185    19.3   960     CRMSSC  
     LIGAND CONTACTS . . . .   10.65          5    25.0    20     CRMSSC  
     SURFACE . . . . . . . .   20.60        156    18.0   869     CRMSSC  
     BURIED  . . . . . . . .   18.57        164    21.9   748     CRMSSC  
     CORE  . . . . . . . . .   18.32        135    20.5   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   19.20       1896    52.8  3589     CRMSALL 
     WELL ORDERED  . . . . .   18.33       1395    52.5  2655     CRMSALL 
     NO INTER CONTACTS . . .   18.69       1569    53.7  2923     CRMSALL 
     SHIFTED CHAIN . . . . .   19.18       1726    52.8  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   17.44        940    49.8  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS   20.05       1089    51.8  2104     CRMSALL 
     LIGAND CONTACTS . . . .    8.94         26    63.4    41     CRMSALL 
     SURFACE . . . . . . . .   20.20        944    50.7  1861     CRMSALL 
     BURIED  . . . . . . . .   18.15        952    55.1  1728     CRMSALL 
     CORE  . . . . . . . . .   17.99        807    54.3  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.00      0     0.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2     0.00      0     0.0     3      43-RLD-45   
 CA  LOOP  3     0.00      0     0.0     8      69-MMAGLTEE-76   
 CA  LOOP  4    11.31      5   100.0     5     111-TATAD-115  
 CA  LOOP  5     8.94      5   100.0     5     123-GFGGE-127  
 CA  LOOP  6     7.32     11   100.0    11     131-HGANFDEAKAK-141  
 CA  LOOP  7    19.13      3   100.0     3     149-QGF-151  
 CA  LOOP  8    16.17      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9    15.34     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10    12.06      4   100.0     4     236-GLFA-239  
 CA  LOOP 11    15.22     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     7.96      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    22.36    155    84.2   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     0.00      0     0.0    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2     0.00      0     0.0    15      43-RLD-45   
 MC  LOOP  3     0.00      0     0.0    39      69-MMAGLTEE-76   
 MC  LOOP  4    11.71     24    96.0    25     111-TATAD-115  
 MC  LOOP  5     9.36     22   100.0    22     123-GFGGE-127  
 MC  LOOP  6     7.22     52    96.3    54     131-HGANFDEAKAK-141  
 MC  LOOP  7    19.14     14   100.0    14     149-QGF-151  
 MC  LOOP  8    16.19     25   100.0    25     202-QLMPQ-206  
 MC  LOOP  9    15.69     74   100.0    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10    11.93     19   100.0    19     236-GLFA-239  
 MC  LOOP 11    15.01     63    96.9    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     8.03     29    96.7    30     300-IALHNI-305  
 MC  LOOP 13    22.28    748    83.0   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     0.00      0     0.0   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2     0.00      0     0.0    27      43-RLD-45   
 ALL LOOP  3     0.00      0     0.0    58      69-MMAGLTEE-76   
 ALL LOOP  4    11.71     24    75.0    32     111-TATAD-115  
 ALL LOOP  5     9.36     22    68.8    32     123-GFGGE-127  
 ALL LOOP  6     7.22     52    69.3    75     131-HGANFDEAKAK-141  
 ALL LOOP  7    19.14     14    58.3    24     149-QGF-151  
 ALL LOOP  8    16.19     25    61.0    41     202-QLMPQ-206  
 ALL LOOP  9    15.69     74    76.3    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10    11.93     19   100.0    19     236-GLFA-239  
 ALL LOOP 11    15.01     63    62.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     8.03     29    61.7    47     300-IALHNI-305  
 ALL LOOP 13    22.28    748    54.3  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 CA  LOOP  4     0.63      5   100.0     5     111-TATAD-115  
 CA  LOOP  5     2.67      5   100.0     5     123-GFGGE-127  
 CA  LOOP  6     4.34     11   100.0    11     131-HGANFDEAKAK-141  
 CA  LOOP  7     0.50      3   100.0     3     149-QGF-151  
 CA  LOOP  8     2.17      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9     4.71     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     1.30      4   100.0     4     236-GLFA-239  
 CA  LOOP 11     2.88     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     2.21      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    18.16    155    84.2   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 MC  LOOP  4     1.87     24    96.0    25     111-TATAD-115  
 MC  LOOP  5     3.02     22   100.0    22     123-GFGGE-127  
 MC  LOOP  6     4.38     52    96.3    54     131-HGANFDEAKAK-141  
 MC  LOOP  7     1.62     14   100.0    14     149-QGF-151  
 MC  LOOP  8     2.80     25   100.0    25     202-QLMPQ-206  
 MC  LOOP  9     4.73     74   100.0    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     1.87     19   100.0    19     236-GLFA-239  
 MC  LOOP 11     3.02     63    96.9    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     2.72     29    96.7    30     300-IALHNI-305  
 MC  LOOP 13    18.05    748    83.0   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 ALL LOOP  4     1.87     24    75.0    32     111-TATAD-115  
 ALL LOOP  5     3.02     22    68.8    32     123-GFGGE-127  
 ALL LOOP  6     4.38     52    69.3    75     131-HGANFDEAKAK-141  
 ALL LOOP  7     1.62     14    58.3    24     149-QGF-151  
 ALL LOOP  8     2.80     25    61.0    41     202-QLMPQ-206  
 ALL LOOP  9     4.73     74    76.3    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     1.87     19   100.0    19     236-GLFA-239  
 ALL LOOP 11     3.02     63    62.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     2.72     29    61.7    47     300-IALHNI-305  
 ALL LOOP 13    18.05    748    54.3  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   17.608      1.000       0.500    394    79.9   493     ERRCA  
     WELL ORDERED  . . . . .   16.924      1.000       0.500    297    77.7   382     ERRCA  
     NO INTER CONTACTS . . .   17.164      1.000       0.500    327    79.8   410     ERRCA  
     SHIFTED CHAIN . . . . .   17.502      1.000       0.500    359    80.1   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   16.173      1.000       0.500    194    77.9   249     ERRCA  
     LARGE SHIFTS/INSERTIONS   17.936      1.000       0.500    226    79.0   286     ERRCA  
     LIGAND CONTACTS . . . .    6.812      1.000       0.500      6   100.0     6     ERRCA  
     SURFACE . . . . . . . .   18.240      1.000       0.500    197    79.4   248     ERRCA  
     BURIED  . . . . . . . .   16.975      1.000       0.500    197    80.4   245     ERRCA  
     CORE  . . . . . . . . .   17.166      1.000       0.500    168    81.2   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   17.600      1.000       0.500   1896    78.5  2415     ERRMC  
     WELL ORDERED  . . . . .   16.996      1.000       0.500   1395    76.1  1834     ERRMC  
     NO INTER CONTACTS . . .   17.121      1.000       0.500   1569    78.3  2005     ERRMC  
     SHIFTED CHAIN . . . . .   17.483      1.000       0.500   1726    78.7  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   16.153      1.000       0.500    940    76.4  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS   17.942      1.000       0.500   1089    77.8  1400     ERRMC  
     LIGAND CONTACTS . . . .    8.002      1.000       0.500     26   100.0    26     ERRMC  
     SURFACE . . . . . . . .   18.272      1.000       0.500    944    78.1  1209     ERRMC  
     BURIED  . . . . . . . .   16.934      1.000       0.500    952    78.9  1206     ERRMC  
     CORE  . . . . . . . . .   17.139      1.000       0.500    807    79.5  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   17.971      1.000       0.500    320    19.8  1617     ERRSC  
     WELL ORDERED  . . . . .   17.295      1.000       0.500    241    20.7  1162     ERRSC  
     NO INTER CONTACTS . . .   17.429      1.000       0.500    261    20.3  1283     ERRSC  
     RELIABLE SIDE CHAINS  .   17.971      1.000       0.500    320    24.1  1329     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0  1058     ERRSC  
     SHIFTED CHAIN . . . . .   17.812      1.000       0.500    290    19.7  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   16.445      1.000       0.500    164    18.4   891     ERRSC  
     LARGE SHIFTS/INSERTIONS   18.396      1.000       0.500    185    19.3   960     ERRSC  
     LIGAND CONTACTS . . . .   10.269      1.000       0.500      5    25.0    20     ERRSC  
     SURFACE . . . . . . . .   18.689      1.000       0.500    156    18.0   869     ERRSC  
     BURIED  . . . . . . . .   17.287      1.000       0.500    164    21.9   748     ERRSC  
     CORE  . . . . . . . . .   17.387      1.000       0.500    135    20.5   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   17.600      1.000       0.500   1896    52.8  3589     ERRALL 
     WELL ORDERED  . . . . .   16.996      1.000       0.500   1395    52.5  2655     ERRALL 
     NO INTER CONTACTS . . .   17.121      1.000       0.500   1569    53.7  2923     ERRALL 
     SHIFTED CHAIN . . . . .   17.483      1.000       0.500   1726    52.8  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   16.153      1.000       0.500    940    49.8  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS   17.942      1.000       0.500   1089    51.8  2104     ERRALL 
     LIGAND CONTACTS . . . .    8.002      1.000       0.500     26    63.4    41     ERRALL 
     SURFACE . . . . . . . .   18.272      1.000       0.500    944    50.7  1861     ERRALL 
     BURIED  . . . . . . . .   16.934      1.000       0.500    952    55.1  1728     ERRALL 
     CORE  . . . . . . . . .   17.139      1.000       0.500    807    54.3  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         2         5         8        18        67     394     493   DISTCA 
CA  (P)      0.41      1.01      1.62      3.65     13.59             493   DISTCA 
CA  (RMS)    0.72      1.32      1.74      3.44      7.13                   DISTCA 
 
ALL (N)         3        12        28        86       316    1896    3589   DISTALL 
ALL (P)      0.08      0.33      0.78      2.40      8.80            3589   DISTALL 
ALL (RMS)    0.73      1.38      2.12      3.61      7.05                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207           168           226          RMSLSI 
CA  (P)       41.99         34.08         45.84          RMSLSI 
CA  (RMS)      1.49         18.01         20.06          RMSLSI 
 
 
 
END of the results output 
