 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 3038 atoms, 2815 common with TARGET 
           Number of atoms possible to evaluate: 1528 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    83.24           43.9   622    63.4   981     ARMSMC  
     WELL ORDERED  . . . . .    82.03           47.9   472    64.7   729     ARMSMC  
     NO INTER CONTACTS . . .    81.51           45.4   509    62.4   816     ARMSMC  
     SHIFTED CHAIN . . . . .    84.26           42.4   573    64.3   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    75.46           54.4   320    64.4   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    86.64           38.6   381    67.2   567     ARMSMC  
     LIGAND CONTACTS . . . .    27.86           75.0     4    40.0    10     ARMSMC  
     SURFACE . . . . . . . .    83.62           39.8   309    62.7   493     ARMSMC  
     BURIED  . . . . . . . .    82.86           47.9   313    64.1   488     ARMSMC  
     CORE  . . . . . . . . .    77.55           52.3   241    58.2   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   230     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   232     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.39882     r(1,2) =  -0.87293     r(1,3) =   0.28096 
 r(2,1) =  -0.40834     r(2,2) =   0.10528     r(2,3) =   0.90674 
 r(3,1) =  -0.82110     r(3,2) =  -0.47635     r(3,3) =  -0.31446 
THE OFFSET VECTOR: 
 v(1) = -77.96444     v(2) =  22.86460     v(3) =  21.35842 
 
 Number of iteration 24                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.30           (Number of atoms:    9) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   30.40        318    64.5   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0956                            CRMSCA  
     WELL ORDERED  . . . . .   27.99        253    66.2   382     CRMSCA  
     NO INTER CONTACTS . . .   30.72        261    63.7   410     CRMSCA  
     SHIFTED CHAIN . . . . .   31.19        293    65.4   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   29.52        163    65.5   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS   35.02        195    68.2   286     CRMSCA  
     LIGAND CONTACTS . . . .    8.77          3    50.0     6     CRMSCA  
     SURFACE . . . . . . . .   31.88        157    63.3   248     CRMSCA  
     BURIED  . . . . . . . .   28.89        161    65.7   245     CRMSCA  
     CORE  . . . . . . . . .   21.10        123    59.4   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   30.49       1528    63.3  2415     CRMSMC  
     WELL ORDERED  . . . . .   28.18       1185    64.6  1834     CRMSMC  
     NO INTER CONTACTS . . .   30.77       1252    62.4  2005     CRMSMC  
     SHIFTED CHAIN . . . . .   31.27       1406    64.1  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   29.70        792    64.4  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS   35.14        935    66.8  1400     CRMSMC  
     LIGAND CONTACTS . . . .   10.02         16    61.5    26     CRMSMC  
     SURFACE . . . . . . . .   31.98        749    62.0  1209     CRMSMC  
     BURIED  . . . . . . . .   28.99        779    64.6  1206     CRMSMC  
     CORE  . . . . . . . . .   21.19        593    58.4  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   30.68        256    15.8  1617     CRMSSC  
     WELL ORDERED  . . . . .   28.21        199    17.1  1162     CRMSSC  
     NO INTER CONTACTS . . .   31.04        208    16.2  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .   30.68        256    19.3  1329     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0  1058     CRMSSC  
     SECONDARY STRUCTURE . .   29.88        140    15.7   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS   35.42        155    16.1   960     CRMSSC  
     LIGAND CONTACTS . . . .   13.04          4    20.0    20     CRMSSC  
     SURFACE . . . . . . . .   32.10        121    13.9   869     CRMSSC  
     BURIED  . . . . . . . .   29.35        135    18.0   748     CRMSSC  
     CORE  . . . . . . . . .   21.47        101    15.4   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   30.49       1528    42.6  3589     CRMSALL 
     WELL ORDERED  . . . . .   28.18       1185    44.6  2655     CRMSALL 
     NO INTER CONTACTS . . .   30.77       1252    42.8  2923     CRMSALL 
     SHIFTED CHAIN . . . . .   31.27       1406    43.0  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   29.70        792    42.0  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS   35.14        935    44.4  2104     CRMSALL 
     LIGAND CONTACTS . . . .   10.02         16    39.0    41     CRMSALL 
     SURFACE . . . . . . . .   31.98        749    40.2  1861     CRMSALL 
     BURIED  . . . . . . . .   28.99        779    45.1  1728     CRMSALL 
     CORE  . . . . . . . . .   21.19        593    39.9  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.00      0     0.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2     0.00      0     0.0     3      43-RLD-45   
 CA  LOOP  3     0.00      0     0.0     8      69-MMAGLTEE-76   
 CA  LOOP  4     0.00      0     0.0     5     111-TATAD-115  
 CA  LOOP  5    27.00      2    40.0     5     123-GFGGE-127  
 CA  LOOP  6    20.38     11   100.0    11     131-HGANFDEAKAK-141  
 CA  LOOP  7    36.48      3   100.0     3     149-QGF-151  
 CA  LOOP  8    23.78      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9    21.37     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     7.31      4   100.0     4     236-GLFA-239  
 CA  LOOP 11    33.17      9    69.2    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12    19.39      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    38.84    137    74.5   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     0.00      0     0.0    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2     0.00      0     0.0    15      43-RLD-45   
 MC  LOOP  3     0.00      0     0.0    39      69-MMAGLTEE-76   
 MC  LOOP  4     0.00      0     0.0    25     111-TATAD-115  
 MC  LOOP  5    26.10      9    40.9    22     123-GFGGE-127  
 MC  LOOP  6    20.60     53    98.1    54     131-HGANFDEAKAK-141  
 MC  LOOP  7    36.19     14   100.0    14     149-QGF-151  
 MC  LOOP  8    24.01     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9    21.68     73    98.6    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     7.05     18    94.7    19     236-GLFA-239  
 MC  LOOP 11    33.16     45    69.2    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12    19.66     30   100.0    30     300-IALHNI-305  
 MC  LOOP 13    38.97    655    72.7   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     0.00      0     0.0   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2     0.00      0     0.0    27      43-RLD-45   
 ALL LOOP  3     0.00      0     0.0    58      69-MMAGLTEE-76   
 ALL LOOP  4     0.00      0     0.0    32     111-TATAD-115  
 ALL LOOP  5    26.10      9    28.1    32     123-GFGGE-127  
 ALL LOOP  6    20.60     53    70.7    75     131-HGANFDEAKAK-141  
 ALL LOOP  7    36.19     14    58.3    24     149-QGF-151  
 ALL LOOP  8    24.01     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9    21.68     73    75.3    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     7.05     18    94.7    19     236-GLFA-239  
 ALL LOOP 11    33.16     45    44.6   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12    19.66     30    63.8    47     300-IALHNI-305  
 ALL LOOP 13    38.97    655    47.6  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 CA  LOOP  6     6.58     11   100.0    11     131-HGANFDEAKAK-141  
 CA  LOOP  7     0.16      3   100.0     3     149-QGF-151  
 CA  LOOP  8     1.37      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9     4.43     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     0.76      4   100.0     4     236-GLFA-239  
 CA  LOOP 11     2.51      9    69.2    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     2.59      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    18.17    137    74.5   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 MC  LOOP  6     6.52     53    98.1    54     131-HGANFDEAKAK-141  
 MC  LOOP  7     1.27     14   100.0    14     149-QGF-151  
 MC  LOOP  8     1.92     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9     4.63     73    98.6    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     1.53     18    94.7    19     236-GLFA-239  
 MC  LOOP 11     2.80     45    69.2    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     2.99     30   100.0    30     300-IALHNI-305  
 MC  LOOP 13    18.12    655    72.7   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 ALL LOOP  6     6.52     53    70.7    75     131-HGANFDEAKAK-141  
 ALL LOOP  7     1.27     14    58.3    24     149-QGF-151  
 ALL LOOP  8     1.92     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9     4.63     73    75.3    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     1.53     18    94.7    19     236-GLFA-239  
 ALL LOOP 11     2.80     45    44.6   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     2.99     30    63.8    47     300-IALHNI-305  
 ALL LOOP 13    18.12    655    47.6  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   26.599      1.000       0.500    318    64.5   493     ERRCA  
     WELL ORDERED  . . . . .   24.298      1.000       0.500    253    66.2   382     ERRCA  
     NO INTER CONTACTS . . .   26.790      1.000       0.500    261    63.7   410     ERRCA  
     SHIFTED CHAIN . . . . .   27.369      1.000       0.500    293    65.4   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   25.542      1.000       0.500    163    65.5   249     ERRCA  
     LARGE SHIFTS/INSERTIONS   31.548      1.000       0.500    195    68.2   286     ERRCA  
     LIGAND CONTACTS . . . .    8.743      1.000       0.500      3    50.0     6     ERRCA  
     SURFACE . . . . . . . .   28.338      1.000       0.500    157    63.3   248     ERRCA  
     BURIED  . . . . . . . .   24.903      1.000       0.500    161    65.7   245     ERRCA  
     CORE  . . . . . . . . .   18.752      1.000       0.500    123    59.4   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   26.722      1.000       0.500   1528    63.3  2415     ERRMC  
     WELL ORDERED  . . . . .   24.428      1.000       0.500   1185    64.6  1834     ERRMC  
     NO INTER CONTACTS . . .   26.869      1.000       0.500   1252    62.4  2005     ERRMC  
     SHIFTED CHAIN . . . . .   27.483      1.000       0.500   1406    64.1  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   25.724      1.000       0.500    792    64.4  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS   31.709      1.000       0.500    935    66.8  1400     ERRMC  
     LIGAND CONTACTS . . . .    9.574      1.000       0.500     16    61.5    26     ERRMC  
     SURFACE . . . . . . . .   28.452      1.000       0.500    749    62.0  1209     ERRMC  
     BURIED  . . . . . . . .   25.059      1.000       0.500    779    64.6  1206     ERRMC  
     CORE  . . . . . . . . .   18.860      1.000       0.500    593    58.4  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   27.044      1.000       0.500    256    15.8  1617     ERRSC  
     WELL ORDERED  . . . . .   24.665      1.000       0.500    199    17.1  1162     ERRSC  
     NO INTER CONTACTS . . .   27.247      1.000       0.500    208    16.2  1283     ERRSC  
     RELIABLE SIDE CHAINS  .   27.044      1.000       0.500    256    19.3  1329     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0  1058     ERRSC  
     SHIFTED CHAIN . . . . .   27.789      1.000       0.500    234    15.9  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   26.005      1.000       0.500    140    15.7   891     ERRSC  
     LARGE SHIFTS/INSERTIONS   32.073      1.000       0.500    155    16.1   960     ERRSC  
     LIGAND CONTACTS . . . .   12.314      1.000       0.500      4    20.0    20     ERRSC  
     SURFACE . . . . . . . .   28.593      1.000       0.500    121    13.9   869     ERRSC  
     BURIED  . . . . . . . .   25.655      1.000       0.500    135    18.0   748     ERRSC  
     CORE  . . . . . . . . .   19.325      1.000       0.500    101    15.4   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   26.722      1.000       0.500   1528    42.6  3589     ERRALL 
     WELL ORDERED  . . . . .   24.428      1.000       0.500   1185    44.6  2655     ERRALL 
     NO INTER CONTACTS . . .   26.869      1.000       0.500   1252    42.8  2923     ERRALL 
     SHIFTED CHAIN . . . . .   27.483      1.000       0.500   1406    43.0  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   25.724      1.000       0.500    792    42.0  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS   31.709      1.000       0.500    935    44.4  2104     ERRALL 
     LIGAND CONTACTS . . . .    9.574      1.000       0.500     16    39.0    41     ERRALL 
     SURFACE . . . . . . . .   28.452      1.000       0.500    749    40.2  1861     ERRALL 
     BURIED  . . . . . . . .   25.059      1.000       0.500    779    45.1  1728     ERRALL 
     CORE  . . . . . . . . .   18.860      1.000       0.500    593    39.9  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         3         9         9        18        46     318     493   DISTCA 
CA  (P)      0.61      1.83      1.83      3.65      9.33             493   DISTCA 
CA  (RMS)    0.83      1.30      1.30      3.17      6.34                   DISTCA 
 
ALL (N)         8        28        43        86       204    1528    3589   DISTALL 
ALL (P)      0.22      0.78      1.20      2.40      5.68            3589   DISTALL 
ALL (RMS)    0.82      1.27      1.84      3.17      6.20                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207           123           195          RMSLSI 
CA  (P)       41.99         24.95         39.55          RMSLSI 
CA  (RMS)      1.49         21.10         35.02          RMSLSI 
 
 
 
END of the results output 
