 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 2519 atoms, 2394 common with TARGET 
           Number of atoms possible to evaluate: 2344 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    87.45           41.6   936    95.4   981     ARMSMC  
     WELL ORDERED  . . . . .    87.45           42.9   706    96.8   729     ARMSMC  
     NO INTER CONTACTS . . .    86.09           42.2   791    96.9   816     ARMSMC  
     SHIFTED CHAIN . . . . .    87.75           40.7   846    94.9   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    83.38           51.2   480    96.6   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    89.30           39.0   523    92.2   567     ARMSMC  
     LIGAND CONTACTS . . . .    92.91           20.0    10   100.0    10     ARMSMC  
     SURFACE . . . . . . . .    87.59           41.0   454    92.1   493     ARMSMC  
     BURIED  . . . . . . . .    87.32           42.1   482    98.8   488     ARMSMC  
     CORE  . . . . . . . . .    85.05           44.8   413    99.8   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   230     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   232     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.17556     r(1,2) =  -0.93746     r(1,3) =   0.30059 
 r(2,1) =   0.04487     r(2,2) =   0.29740     r(2,3) =   0.95370 
 r(3,1) =  -0.98345     r(3,2) =   0.18092     r(3,3) =  -0.01014 
THE OFFSET VECTOR: 
 v(1) = -26.05689     v(2) = -207.79314     v(3) =  48.55816 
 
 Number of iteration 30                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.10           (Number of atoms:    4) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   34.83        485    98.4   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0718                            CRMSCA  
     WELL ORDERED  . . . . .   34.33        380    99.5   382     CRMSCA  
     NO INTER CONTACTS . . .   34.83        403    98.3   410     CRMSCA  
     SHIFTED CHAIN . . . . .   35.48        440    98.2   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   36.25        247    99.2   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS   36.38        278    97.2   286     CRMSCA  
     LIGAND CONTACTS . . . .    6.14          6   100.0     6     CRMSCA  
     SURFACE . . . . . . . .   36.54        240    96.8   248     CRMSCA  
     BURIED  . . . . . . . .   33.08        245   100.0   245     CRMSCA  
     CORE  . . . . . . . . .   32.65        207   100.0   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   34.85       2344    97.1  2415     CRMSMC  
     WELL ORDERED  . . . . .   34.17       1794    97.8  1834     CRMSMC  
     NO INTER CONTACTS . . .   34.84       1946    97.1  2005     CRMSMC  
     SHIFTED CHAIN . . . . .   35.50       2123    96.9  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   36.30       1202    97.7  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS   36.41       1342    95.9  1400     CRMSMC  
     LIGAND CONTACTS . . . .   10.60         26   100.0    26     CRMSMC  
     SURFACE . . . . . . . .   36.64       1152    95.3  1209     CRMSMC  
     BURIED  . . . . . . . .   33.04       1192    98.8  1206     CRMSMC  
     CORE  . . . . . . . . .   32.65       1002    98.7  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   34.87        404    25.0  1617     CRMSSC  
     WELL ORDERED  . . . . .   33.56        310    26.7  1162     CRMSSC  
     NO INTER CONTACTS . . .   34.99        334    26.0  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .   34.87        404    30.4  1329     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0  1058     CRMSSC  
     SECONDARY STRUCTURE . .   36.19        214    24.0   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS   36.47        230    24.0   960     CRMSSC  
     LIGAND CONTACTS . . . .   15.42          5    25.0    20     CRMSSC  
     SURFACE . . . . . . . .   36.91        192    22.1   869     CRMSSC  
     BURIED  . . . . . . . .   32.90        212    28.3   748     CRMSSC  
     CORE  . . . . . . . . .   32.62        174    26.5   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   34.85       2344    65.3  3589     CRMSALL 
     WELL ORDERED  . . . . .   34.17       1794    67.6  2655     CRMSALL 
     NO INTER CONTACTS . . .   34.84       1946    66.6  2923     CRMSALL 
     SHIFTED CHAIN . . . . .   35.50       2123    65.0  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   36.30       1202    63.7  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS   36.41       1342    63.8  2104     CRMSALL 
     LIGAND CONTACTS . . . .   10.60         26    63.4    41     CRMSALL 
     SURFACE . . . . . . . .   36.64       1152    61.9  1861     CRMSALL 
     BURIED  . . . . . . . .   33.04       1192    69.0  1728     CRMSALL 
     CORE  . . . . . . . . .   32.65       1002    67.5  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    53.07     18    90.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2    37.75      3   100.0     3      43-RLD-45   
 CA  LOOP  3    39.45      8   100.0     8      69-MMAGLTEE-76   
 CA  LOOP  4    48.70      4    80.0     5     111-TATAD-115  
 CA  LOOP  5    40.64      5   100.0     5     123-GFGGE-127  
 CA  LOOP  6    58.62     11   100.0    11     131-HGANFDEAKAK-141  
 CA  LOOP  7    67.46      3   100.0     3     149-QGF-151  
 CA  LOOP  8    12.53      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9    11.62     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10    27.48      4   100.0     4     236-GLFA-239  
 CA  LOOP 11    17.00     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12    27.10      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    34.50    179    97.3   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    52.83     88    89.8    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2    37.70     14    93.3    15      43-RLD-45   
 MC  LOOP  3    39.36     38    97.4    39      69-MMAGLTEE-76   
 MC  LOOP  4    48.44     20    80.0    25     111-TATAD-115  
 MC  LOOP  5    40.67     22   100.0    22     123-GFGGE-127  
 MC  LOOP  6    58.84     54   100.0    54     131-HGANFDEAKAK-141  
 MC  LOOP  7    67.08     14   100.0    14     149-QGF-151  
 MC  LOOP  8    12.20     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9    11.52     72    97.3    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10    27.78     19   100.0    19     236-GLFA-239  
 MC  LOOP 11    16.86     64    98.5    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12    27.21     30   100.0    30     300-IALHNI-305  
 MC  LOOP 13    34.57    864    95.9   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    52.83     88    62.0   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2    37.70     14    51.9    27      43-RLD-45   
 ALL LOOP  3    39.36     38    65.5    58      69-MMAGLTEE-76   
 ALL LOOP  4    48.44     20    62.5    32     111-TATAD-115  
 ALL LOOP  5    40.67     22    68.8    32     123-GFGGE-127  
 ALL LOOP  6    58.84     54    72.0    75     131-HGANFDEAKAK-141  
 ALL LOOP  7    67.08     14    58.3    24     149-QGF-151  
 ALL LOOP  8    12.20     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9    11.52     72    74.2    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10    27.78     19   100.0    19     236-GLFA-239  
 ALL LOOP 11    16.86     64    63.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12    27.21     30    63.8    47     300-IALHNI-305  
 ALL LOOP 13    34.57    864    62.7  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     7.40     18    90.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2     0.74      3   100.0     3      43-RLD-45   
 CA  LOOP  3     2.02      8   100.0     8      69-MMAGLTEE-76   
 CA  LOOP  4     1.54      4    80.0     5     111-TATAD-115  
 CA  LOOP  5     1.93      5   100.0     5     123-GFGGE-127  
 CA  LOOP  6     4.78     11   100.0    11     131-HGANFDEAKAK-141  
 CA  LOOP  7     0.64      3   100.0     3     149-QGF-151  
 CA  LOOP  8     1.54      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9     5.78     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     1.89      4   100.0     4     236-GLFA-239  
 CA  LOOP 11     3.86     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     2.58      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    22.12    179    97.3   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     7.46     88    89.8    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2     1.88     14    93.3    15      43-RLD-45   
 MC  LOOP  3     2.07     38    97.4    39      69-MMAGLTEE-76   
 MC  LOOP  4     2.06     20    80.0    25     111-TATAD-115  
 MC  LOOP  5     2.30     22   100.0    22     123-GFGGE-127  
 MC  LOOP  6     4.79     54   100.0    54     131-HGANFDEAKAK-141  
 MC  LOOP  7     1.88     14   100.0    14     149-QGF-151  
 MC  LOOP  8     1.87     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9     5.80     72    97.3    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     2.53     19   100.0    19     236-GLFA-239  
 MC  LOOP 11     4.01     64    98.5    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     2.91     30   100.0    30     300-IALHNI-305  
 MC  LOOP 13    22.15    864    95.9   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     7.46     88    62.0   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2     1.88     14    51.9    27      43-RLD-45   
 ALL LOOP  3     2.07     38    65.5    58      69-MMAGLTEE-76   
 ALL LOOP  4     2.06     20    62.5    32     111-TATAD-115  
 ALL LOOP  5     2.30     22    68.8    32     123-GFGGE-127  
 ALL LOOP  6     4.79     54    72.0    75     131-HGANFDEAKAK-141  
 ALL LOOP  7     1.88     14    58.3    24     149-QGF-151  
 ALL LOOP  8     1.87     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9     5.80     72    74.2    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     2.53     19   100.0    19     236-GLFA-239  
 ALL LOOP 11     4.01     64    63.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     2.91     30    63.8    47     300-IALHNI-305  
 ALL LOOP 13    22.15    864    62.7  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   31.445      1.000       0.500    485    98.4   493     ERRCA  
     WELL ORDERED  . . . . .   30.885      1.000       0.500    380    99.5   382     ERRCA  
     NO INTER CONTACTS . . .   31.510      1.000       0.500    403    98.3   410     ERRCA  
     SHIFTED CHAIN . . . . .   32.022      1.000       0.500    440    98.2   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   33.136      1.000       0.500    247    99.2   249     ERRCA  
     LARGE SHIFTS/INSERTIONS   32.736      1.000       0.500    278    97.2   286     ERRCA  
     LIGAND CONTACTS . . . .    4.840      1.000       0.500      6   100.0     6     ERRCA  
     SURFACE . . . . . . . .   32.796      1.000       0.500    240    96.8   248     ERRCA  
     BURIED  . . . . . . . .   30.121      1.000       0.500    245   100.0   245     ERRCA  
     CORE  . . . . . . . . .   29.711      1.000       0.500    207   100.0   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   31.485      1.000       0.500   2344    97.1  2415     ERRMC  
     WELL ORDERED  . . . . .   30.785      1.000       0.500   1794    97.8  1834     ERRMC  
     NO INTER CONTACTS . . .   31.533      1.000       0.500   1946    97.1  2005     ERRMC  
     SHIFTED CHAIN . . . . .   32.054      1.000       0.500   2123    96.9  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   33.201      1.000       0.500   1202    97.7  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS   32.772      1.000       0.500   1342    95.9  1400     ERRMC  
     LIGAND CONTACTS . . . .    8.029      1.000       0.500     26   100.0    26     ERRMC  
     SURFACE . . . . . . . .   32.919      1.000       0.500   1152    95.3  1209     ERRMC  
     BURIED  . . . . . . . .   30.098      1.000       0.500   1192    98.8  1206     ERRMC  
     CORE  . . . . . . . . .   29.761      1.000       0.500   1002    98.7  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   31.528      1.000       0.500    404    25.0  1617     ERRSC  
     WELL ORDERED  . . . . .   30.288      1.000       0.500    310    26.7  1162     ERRSC  
     NO INTER CONTACTS . . .   31.669      1.000       0.500    334    26.0  1283     ERRSC  
     RELIABLE SIDE CHAINS  .   31.528      1.000       0.500    404    30.4  1329     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0  1058     ERRSC  
     SHIFTED CHAIN . . . . .   32.127      1.000       0.500    363    24.6  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   33.056      1.000       0.500    214    24.0   891     ERRSC  
     LARGE SHIFTS/INSERTIONS   32.779      1.000       0.500    230    24.0   960     ERRSC  
     LIGAND CONTACTS . . . .   13.565      1.000       0.500      5    25.0    20     ERRSC  
     SURFACE . . . . . . . .   33.253      1.000       0.500    192    22.1   869     ERRSC  
     BURIED  . . . . . . . .   29.965      1.000       0.500    212    28.3   748     ERRSC  
     CORE  . . . . . . . . .   29.874      1.000       0.500    174    26.5   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   31.485      1.000       0.500   2344    65.3  3589     ERRALL 
     WELL ORDERED  . . . . .   30.785      1.000       0.500   1794    67.6  2655     ERRALL 
     NO INTER CONTACTS . . .   31.533      1.000       0.500   1946    66.6  2923     ERRALL 
     SHIFTED CHAIN . . . . .   32.054      1.000       0.500   2123    65.0  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   33.201      1.000       0.500   1202    63.7  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS   32.772      1.000       0.500   1342    63.8  2104     ERRALL 
     LIGAND CONTACTS . . . .    8.029      1.000       0.500     26    63.4    41     ERRALL 
     SURFACE . . . . . . . .   32.919      1.000       0.500   1152    61.9  1861     ERRALL 
     BURIED  . . . . . . . .   30.098      1.000       0.500   1192    69.0  1728     ERRALL 
     CORE  . . . . . . . . .   29.761      1.000       0.500   1002    67.5  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         2         4         4        13        38     485     493   DISTCA 
CA  (P)      0.41      0.81      0.81      2.64      7.71             493   DISTCA 
CA  (RMS)    0.67      1.10      1.10      3.53      6.55                   DISTCA 
 
ALL (N)         2        10        20        62       178    2344    3589   DISTALL 
ALL (P)      0.06      0.28      0.56      1.73      4.96            3589   DISTALL 
ALL (RMS)    0.67      1.43      2.13      3.63      6.60                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207           207           278          RMSLSI 
CA  (P)       41.99         41.99         56.39          RMSLSI 
CA  (RMS)      1.49         32.65         36.38          RMSLSI 
 
 
 
END of the results output 
