 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 3758 atoms, 3438 common with TARGET 
           Number of atoms possible to evaluate: 354 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    86.23           37.1   140    14.3   981     ARMSMC  
     WELL ORDERED  . . . . .    82.47           39.8   108    14.8   729     ARMSMC  
     NO INTER CONTACTS . . .    86.64           37.1   124    15.2   816     ARMSMC  
     SHIFTED CHAIN . . . . .    86.48           37.4   139    15.6   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    72.42           39.3    56    11.3   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    84.07           37.0    92    16.2   567     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0    10     ARMSMC  
     SURFACE . . . . . . . .    94.20           34.3    70    14.2   493     ARMSMC  
     BURIED  . . . . . . . .    77.44           40.0    70    14.3   488     ARMSMC  
     CORE  . . . . . . . . .    90.22           37.5    48    11.6   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   230     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   232     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.76085     r(1,2) =  -0.01082     r(1,3) =   0.64884 
 r(2,1) =  -0.08632     r(2,2) =  -0.98929     r(2,3) =  -0.11772 
 r(3,1) =   0.64316     r(3,2) =  -0.14558     r(3,3) =   0.75176 
THE OFFSET VECTOR: 
 v(1) = -14.47233     v(2) =  39.23165     v(3) =  -2.63414 
 
 Number of iteration 23                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.53           (Number of atoms:    7) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   29.93         73    14.8   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.4099                            CRMSCA  
     WELL ORDERED  . . . . .   27.24         60    15.7   382     CRMSCA  
     NO INTER CONTACTS . . .   29.44         65    15.9   410     CRMSCA  
     SHIFTED CHAIN . . . . .   30.13         72    16.1   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   37.93         29    11.6   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS   35.73         48    16.8   286     CRMSCA  
     LIGAND CONTACTS . . . .    0.00          0     0.0     6     CRMSCA  
     SURFACE . . . . . . . .   28.38         36    14.5   248     CRMSCA  
     BURIED  . . . . . . . .   31.36         37    15.1   245     CRMSCA  
     CORE  . . . . . . . . .   12.81         25    12.1   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   30.02        354    14.7  2415     CRMSMC  
     WELL ORDERED  . . . . .   27.29        274    14.9  1834     CRMSMC  
     NO INTER CONTACTS . . .   29.54        315    15.7  2005     CRMSMC  
     SHIFTED CHAIN . . . . .   30.23        349    15.9  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   37.95        144    11.7  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS   35.86        232    16.6  1400     CRMSMC  
     LIGAND CONTACTS . . . .    0.57          2     7.7    26     CRMSMC  
     SURFACE . . . . . . . .   28.33        173    14.3  1209     CRMSMC  
     BURIED  . . . . . . . .   31.54        181    15.0  1206     CRMSMC  
     CORE  . . . . . . . . .   12.98        122    12.0  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   31.25         62     3.8  1617     CRMSSC  
     WELL ORDERED  . . . . .   28.29         48     4.1  1162     CRMSSC  
     NO INTER CONTACTS . . .   30.68         55     4.3  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .   31.25         62     4.7  1329     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0  1058     CRMSSC  
     SECONDARY STRUCTURE . .   38.14         28     3.1   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS   37.49         40     4.2   960     CRMSSC  
     LIGAND CONTACTS . . . .    0.00          0     0.0    20     CRMSSC  
     SURFACE . . . . . . . .   29.90         29     3.3   869     CRMSSC  
     BURIED  . . . . . . . .   32.40         33     4.4   748     CRMSSC  
     CORE  . . . . . . . . .   14.06         22     3.3   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   30.02        354     9.9  3589     CRMSALL 
     WELL ORDERED  . . . . .   27.29        274    10.3  2655     CRMSALL 
     NO INTER CONTACTS . . .   29.54        315    10.8  2923     CRMSALL 
     SHIFTED CHAIN . . . . .   30.23        349    10.7  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   37.95        144     7.6  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS   35.86        232    11.0  2104     CRMSALL 
     LIGAND CONTACTS . . . .    0.57          2     4.9    41     CRMSALL 
     SURFACE . . . . . . . .   28.33        173     9.3  1861     CRMSALL 
     BURIED  . . . . . . . .   31.54        181    10.5  1728     CRMSALL 
     CORE  . . . . . . . . .   12.98        122     8.2  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.00      0     0.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2     0.00      0     0.0     3      43-RLD-45   
 CA  LOOP  3     0.00      0     0.0     8      69-MMAGLTEE-76   
 CA  LOOP  4     0.00      0     0.0     5     111-TATAD-115  
 CA  LOOP  5     0.00      0     0.0     5     123-GFGGE-127  
 CA  LOOP  6     0.00      0     0.0    11     131-HGANFDEAKAK-141  
 CA  LOOP  7     0.00      0     0.0     3     149-QGF-151  
 CA  LOOP  8    17.66      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9     9.05     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10    11.73      4   100.0     4     236-GLFA-239  
 CA  LOOP 11     0.00      0     0.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     0.00      0     0.0     6     300-IALHNI-305  
 CA  LOOP 13    49.13     24    13.0   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     0.00      0     0.0    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2     0.00      0     0.0    15      43-RLD-45   
 MC  LOOP  3     0.00      0     0.0    39      69-MMAGLTEE-76   
 MC  LOOP  4     0.00      0     0.0    25     111-TATAD-115  
 MC  LOOP  5     0.00      0     0.0    22     123-GFGGE-127  
 MC  LOOP  6     0.00      0     0.0    54     131-HGANFDEAKAK-141  
 MC  LOOP  7     0.00      0     0.0    14     149-QGF-151  
 MC  LOOP  8    17.59     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9     9.09     73    98.6    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10    12.06     19   100.0    19     236-GLFA-239  
 MC  LOOP 11     0.00      0     0.0    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     0.00      0     0.0    30     300-IALHNI-305  
 MC  LOOP 13    49.32    116    12.9   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     0.00      0     0.0   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2     0.00      0     0.0    27      43-RLD-45   
 ALL LOOP  3     0.00      0     0.0    58      69-MMAGLTEE-76   
 ALL LOOP  4     0.00      0     0.0    32     111-TATAD-115  
 ALL LOOP  5     0.00      0     0.0    32     123-GFGGE-127  
 ALL LOOP  6     0.00      0     0.0    75     131-HGANFDEAKAK-141  
 ALL LOOP  7     0.00      0     0.0    24     149-QGF-151  
 ALL LOOP  8    17.59     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9     9.09     73    75.3    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10    12.06     19   100.0    19     236-GLFA-239  
 ALL LOOP 11     0.00      0     0.0   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     0.00      0     0.0    47     300-IALHNI-305  
 ALL LOOP 13    49.32    116     8.4  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  6 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 CA  LOOP  8     2.04      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9     4.37     15   100.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     0.71      4   100.0     4     236-GLFA-239  
 WARNING! LOOP 11 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 12 cannot be considered (not enough atoms). 
 
 CA  LOOP 13     7.31     24    13.0   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  6 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 MC  LOOP  8     2.68     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9     4.47     73    98.6    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     1.64     19   100.0    19     236-GLFA-239  
 WARNING! LOOP 11 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 12 cannot be considered (not enough atoms). 
 
 MC  LOOP 13     7.37    116    12.9   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  3 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  6 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 ALL LOOP  8     2.68     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9     4.47     73    75.3    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     1.64     19   100.0    19     236-GLFA-239  
 WARNING! LOOP 11 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 12 cannot be considered (not enough atoms). 
 
 ALL LOOP 13     7.37    116     8.4  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   22.784      1.000       0.500     73    14.8   493     ERRCA  
     WELL ORDERED  . . . . .   21.054      1.000       0.500     60    15.7   382     ERRCA  
     NO INTER CONTACTS . . .   22.004      1.000       0.500     65    15.9   410     ERRCA  
     SHIFTED CHAIN . . . . .   23.091      1.000       0.500     72    16.1   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   33.267      1.000       0.500     29    11.6   249     ERRCA  
     LARGE SHIFTS/INSERTIONS   28.833      1.000       0.500     48    16.8   286     ERRCA  
     LIGAND CONTACTS . . . .    0.000      0.000       0.000      0     0.0     6     ERRCA  
     SURFACE . . . . . . . .   20.789      1.000       0.500     36    14.5   248     ERRCA  
     BURIED  . . . . . . . .   24.724      1.000       0.500     37    15.1   245     ERRCA  
     CORE  . . . . . . . . .   11.168      1.000       0.500     25    12.1   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   22.930      1.000       0.500    354    14.7  2415     ERRMC  
     WELL ORDERED  . . . . .   21.166      1.000       0.500    274    14.9  1834     ERRMC  
     NO INTER CONTACTS . . .   22.155      1.000       0.500    315    15.7  2005     ERRMC  
     SHIFTED CHAIN . . . . .   23.235      1.000       0.500    349    15.9  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   33.350      1.000       0.500    144    11.7  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS   28.969      1.000       0.500    232    16.6  1400     ERRMC  
     LIGAND CONTACTS . . . .    0.563      1.000       0.500      2     7.7    26     ERRMC  
     SURFACE . . . . . . . .   20.802      1.000       0.500    173    14.3  1209     ERRMC  
     BURIED  . . . . . . . .   24.964      1.000       0.500    181    15.0  1206     ERRMC  
     CORE  . . . . . . . . .   11.446      1.000       0.500    122    12.0  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   24.294      1.000       0.500     62     3.8  1617     ERRSC  
     WELL ORDERED  . . . . .   22.128      1.000       0.500     48     4.1  1162     ERRSC  
     NO INTER CONTACTS . . .   23.392      1.000       0.500     55     4.3  1283     ERRSC  
     RELIABLE SIDE CHAINS  .   24.294      1.000       0.500     62     4.7  1329     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0  1058     ERRSC  
     SHIFTED CHAIN . . . . .   24.663      1.000       0.500     61     4.1  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   33.412      1.000       0.500     28     3.1   891     ERRSC  
     LARGE SHIFTS/INSERTIONS   30.659      1.000       0.500     40     4.2   960     ERRSC  
     LIGAND CONTACTS . . . .    0.000      0.000       0.000      0     0.0    20     ERRSC  
     SURFACE . . . . . . . .   22.639      1.000       0.500     29     3.3   869     ERRSC  
     BURIED  . . . . . . . .   25.749      1.000       0.500     33     4.4   748     ERRSC  
     CORE  . . . . . . . . .   12.721      1.000       0.500     22     3.3   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   22.930      1.000       0.500    354     9.9  3589     ERRALL 
     WELL ORDERED  . . . . .   21.166      1.000       0.500    274    10.3  2655     ERRALL 
     NO INTER CONTACTS . . .   22.155      1.000       0.500    315    10.8  2923     ERRALL 
     SHIFTED CHAIN . . . . .   23.235      1.000       0.500    349    10.7  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   33.350      1.000       0.500    144     7.6  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS   28.969      1.000       0.500    232    11.0  2104     ERRALL 
     LIGAND CONTACTS . . . .    0.563      1.000       0.500      2     4.9    41     ERRALL 
     SURFACE . . . . . . . .   20.802      1.000       0.500    173     9.3  1861     ERRALL 
     BURIED  . . . . . . . .   24.964      1.000       0.500    181    10.5  1728     ERRALL 
     CORE  . . . . . . . . .   11.446      1.000       0.500    122     8.2  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         3         5         7        11        22      73     493   DISTCA 
CA  (P)      0.61      1.01      1.42      2.23      4.46             493   DISTCA 
CA  (RMS)    0.67      1.16      1.53      2.76      6.24                   DISTCA 
 
ALL (N)         8        22        32        53       100     354    3589   DISTALL 
ALL (P)      0.22      0.61      0.89      1.48      2.79            3589   DISTALL 
ALL (RMS)    0.75      1.36      1.74      2.83      6.07                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207            25            48          RMSLSI 
CA  (P)       41.99          5.07          9.74          RMSLSI 
CA  (RMS)      1.49         12.81         35.73          RMSLSI 
 
 
 
END of the results output 
