 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 3462 atoms, 3157 common with TARGET 
           Number of atoms possible to evaluate: 784 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    85.70           39.9   296    30.2   981     ARMSMC  
     WELL ORDERED  . . . . .    83.74           45.5   213    29.2   729     ARMSMC  
     NO INTER CONTACTS . . .    85.18           39.4   226    27.7   816     ARMSMC  
     SHIFTED CHAIN . . . . .    86.26           39.4   264    29.6   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    86.41           47.7   128    25.8   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    83.26           42.6   188    33.2   567     ARMSMC  
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0    10     ARMSMC  
     SURFACE . . . . . . . .    86.07           42.6   169    34.3   493     ARMSMC  
     BURIED  . . . . . . . .    85.21           36.2   127    26.0   488     ARMSMC  
     CORE  . . . . . . . . .    89.79           35.2   108    26.1   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   230     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   232     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =  -0.42516     r(1,2) =  -0.73862     r(1,3) =  -0.52315 
 r(2,1) =   0.83302     r(2,2) =  -0.09326     r(2,3) =  -0.54532 
 r(3,1) =   0.35400     r(3,2) =  -0.66764     r(3,3) =   0.65494 
THE OFFSET VECTOR: 
 v(1) =  46.63872     v(2) =  21.20543     v(3) =  39.38486 
 
 Number of iteration 24                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.43           (Number of atoms:    6) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   34.03        163    33.1   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.2088                            CRMSCA  
     WELL ORDERED  . . . . .   29.59        124    32.5   382     CRMSCA  
     NO INTER CONTACTS . . .   34.21        125    30.5   410     CRMSCA  
     SHIFTED CHAIN . . . . .   34.63        145    32.4   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   28.82         71    28.5   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS   39.11        101    35.3   286     CRMSCA  
     LIGAND CONTACTS . . . .    0.00          0     0.0     6     CRMSCA  
     SURFACE . . . . . . . .   35.54         94    37.9   248     CRMSCA  
     BURIED  . . . . . . . .   31.85         69    28.2   245     CRMSCA  
     CORE  . . . . . . . . .   23.50         62    30.0   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   33.94        784    32.5  2415     CRMSMC  
     WELL ORDERED  . . . . .   29.41        591    32.2  1834     CRMSMC  
     NO INTER CONTACTS . . .   34.17        601    30.0  2005     CRMSMC  
     SHIFTED CHAIN . . . . .   34.56        695    31.7  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   29.04        344    28.0  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS   38.88        485    34.6  1400     CRMSMC  
     LIGAND CONTACTS . . . .    5.71          1     3.8    26     CRMSMC  
     SURFACE . . . . . . . .   35.31        453    37.5  1209     CRMSMC  
     BURIED  . . . . . . . .   31.97        331    27.4  1206     CRMSMC  
     CORE  . . . . . . . . .   23.84        299    29.5  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   34.11        132     8.2  1617     CRMSSC  
     WELL ORDERED  . . . . .   31.03        102     8.8  1162     CRMSSC  
     NO INTER CONTACTS . . .   34.46        101     7.9  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .   34.11        132     9.9  1329     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0  1058     CRMSSC  
     SECONDARY STRUCTURE . .   30.30         60     6.7   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS   38.61         81     8.4   960     CRMSSC  
     LIGAND CONTACTS . . . .    5.71          1     5.0    20     CRMSSC  
     SURFACE . . . . . . . .   34.90         77     8.9   869     CRMSSC  
     BURIED  . . . . . . . .   32.97         55     7.4   748     CRMSSC  
     CORE  . . . . . . . . .   25.36         51     7.8   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   33.94        784    21.8  3589     CRMSALL 
     WELL ORDERED  . . . . .   29.41        591    22.3  2655     CRMSALL 
     NO INTER CONTACTS . . .   34.17        601    20.6  2923     CRMSALL 
     SHIFTED CHAIN . . . . .   34.56        695    21.3  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   29.04        344    18.2  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS   38.88        485    23.1  2104     CRMSALL 
     LIGAND CONTACTS . . . .    5.71          1     2.4    41     CRMSALL 
     SURFACE . . . . . . . .   35.31        453    24.3  1861     CRMSALL 
     BURIED  . . . . . . . .   31.97        331    19.2  1728     CRMSALL 
     CORE  . . . . . . . . .   23.84        299    20.1  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    13.63     13    65.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2    48.44      2    66.7     3      43-RLD-45   
 CA  LOOP  3    13.14      4    50.0     8      69-MMAGLTEE-76   
 CA  LOOP  4     0.00      0     0.0     5     111-TATAD-115  
 CA  LOOP  5     0.00      0     0.0     5     123-GFGGE-127  
 CA  LOOP  6     0.00      0     0.0    11     131-HGANFDEAKAK-141  
 CA  LOOP  7     7.01      3   100.0     3     149-QGF-151  
 CA  LOOP  8     0.00      0     0.0     5     202-QLMPQ-206  
 CA  LOOP  9     0.00      0     0.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     0.00      0     0.0     4     236-GLFA-239  
 CA  LOOP 11     0.00      0     0.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     0.00      0     0.0     6     300-IALHNI-305  
 CA  LOOP 13    43.56     77    41.8   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    13.17     64    65.3    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2    48.79     10    66.7    15      43-RLD-45   
 MC  LOOP  3    13.24     20    51.3    39      69-MMAGLTEE-76   
 MC  LOOP  4     0.00      0     0.0    25     111-TATAD-115  
 MC  LOOP  5     0.00      0     0.0    22     123-GFGGE-127  
 MC  LOOP  6     0.00      0     0.0    54     131-HGANFDEAKAK-141  
 MC  LOOP  7     6.97     14   100.0    14     149-QGF-151  
 MC  LOOP  8     0.00      0     0.0    25     202-QLMPQ-206  
 MC  LOOP  9     0.00      0     0.0    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     0.00      0     0.0    19     236-GLFA-239  
 MC  LOOP 11     0.00      0     0.0    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     0.00      0     0.0    30     300-IALHNI-305  
 MC  LOOP 13    43.42    367    40.7   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    13.17     64    45.1   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2    48.79     10    37.0    27      43-RLD-45   
 ALL LOOP  3    13.24     20    34.5    58      69-MMAGLTEE-76   
 ALL LOOP  4     0.00      0     0.0    32     111-TATAD-115  
 ALL LOOP  5     0.00      0     0.0    32     123-GFGGE-127  
 ALL LOOP  6     0.00      0     0.0    75     131-HGANFDEAKAK-141  
 ALL LOOP  7     6.97     14    58.3    24     149-QGF-151  
 ALL LOOP  8     0.00      0     0.0    41     202-QLMPQ-206  
 ALL LOOP  9     0.00      0     0.0    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     0.00      0     0.0    19     236-GLFA-239  
 ALL LOOP 11     0.00      0     0.0   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     0.00      0     0.0    47     300-IALHNI-305  
 ALL LOOP 13    43.42    367    26.7  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     3.68     13    65.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 CA  LOOP  3     2.60      4    50.0     8      69-MMAGLTEE-76   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  6 cannot be considered (not enough atoms). 
 
 CA  LOOP  7     0.08      3   100.0     3     149-QGF-151  
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  9 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 10 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 11 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 12 cannot be considered (not enough atoms). 
 
 CA  LOOP 13    14.70     77    41.8   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     3.77     64    65.3    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 MC  LOOP  3     3.14     20    51.3    39      69-MMAGLTEE-76   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  6 cannot be considered (not enough atoms). 
 
 MC  LOOP  7     1.07     14   100.0    14     149-QGF-151  
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  9 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 10 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 11 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 12 cannot be considered (not enough atoms). 
 
 MC  LOOP 13    14.67    367    40.7   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     3.77     64    45.1   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 WARNING! LOOP  2 cannot be considered (not enough atoms). 
 
 ALL LOOP  3     3.14     20    34.5    58      69-MMAGLTEE-76   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  6 cannot be considered (not enough atoms). 
 
 ALL LOOP  7     1.07     14    58.3    24     149-QGF-151  
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  9 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 10 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 11 cannot be considered (not enough atoms). 
 
 WARNING! LOOP 12 cannot be considered (not enough atoms). 
 
 ALL LOOP 13    14.67    367    26.7  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   29.124      1.000       0.500    163    33.1   493     ERRCA  
     WELL ORDERED  . . . . .   25.025      1.000       0.500    124    32.5   382     ERRCA  
     NO INTER CONTACTS . . .   29.667      1.000       0.500    125    30.5   410     ERRCA  
     SHIFTED CHAIN . . . . .   29.239      1.000       0.500    145    32.4   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   24.227      1.000       0.500     71    28.5   249     ERRCA  
     LARGE SHIFTS/INSERTIONS   34.184      1.000       0.500    101    35.3   286     ERRCA  
     LIGAND CONTACTS . . . .    0.000      0.000       0.000      0     0.0     6     ERRCA  
     SURFACE . . . . . . . .   30.165      1.000       0.500     94    37.9   248     ERRCA  
     BURIED  . . . . . . . .   27.705      1.000       0.500     69    28.2   245     ERRCA  
     CORE  . . . . . . . . .   20.880      1.000       0.500     62    30.0   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   29.077      1.000       0.500    784    32.5  2415     ERRMC  
     WELL ORDERED  . . . . .   24.900      1.000       0.500    591    32.2  1834     ERRMC  
     NO INTER CONTACTS . . .   29.686      1.000       0.500    601    30.0  2005     ERRMC  
     SHIFTED CHAIN . . . . .   29.197      1.000       0.500    695    31.7  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   24.445      1.000       0.500    344    28.0  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS   33.902      1.000       0.500    485    34.6  1400     ERRMC  
     LIGAND CONTACTS . . . .    5.711      1.000       0.500      1     3.8    26     ERRMC  
     SURFACE . . . . . . . .   29.946      1.000       0.500    453    37.5  1209     ERRMC  
     BURIED  . . . . . . . .   27.887      1.000       0.500    331    27.4  1206     ERRMC  
     CORE  . . . . . . . . .   21.249      1.000       0.500    299    29.5  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   29.505      1.000       0.500    132     8.2  1617     ERRSC  
     WELL ORDERED  . . . . .   26.642      1.000       0.500    102     8.8  1162     ERRSC  
     NO INTER CONTACTS . . .   30.333      1.000       0.500    101     7.9  1283     ERRSC  
     RELIABLE SIDE CHAINS  .   29.505      1.000       0.500    132     9.9  1329     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0  1058     ERRSC  
     SHIFTED CHAIN . . . . .   29.625      1.000       0.500    115     7.8  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   25.975      1.000       0.500     60     6.7   891     ERRSC  
     LARGE SHIFTS/INSERTIONS   33.490      1.000       0.500     81     8.4   960     ERRSC  
     LIGAND CONTACTS . . . .    5.711      1.000       0.500      1     5.0    20     ERRSC  
     SURFACE . . . . . . . .   29.695      1.000       0.500     77     8.9   869     ERRSC  
     BURIED  . . . . . . . .   29.238      1.000       0.500     55     7.4   748     ERRSC  
     CORE  . . . . . . . . .   23.176      1.000       0.500     51     7.8   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   29.077      1.000       0.500    784    21.8  3589     ERRALL 
     WELL ORDERED  . . . . .   24.900      1.000       0.500    591    22.3  2655     ERRALL 
     NO INTER CONTACTS . . .   29.686      1.000       0.500    601    20.6  2923     ERRALL 
     SHIFTED CHAIN . . . . .   29.197      1.000       0.500    695    21.3  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   24.445      1.000       0.500    344    18.2  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS   33.902      1.000       0.500    485    23.1  2104     ERRALL 
     LIGAND CONTACTS . . . .    5.711      1.000       0.500      1     2.4    41     ERRALL 
     SURFACE . . . . . . . .   29.946      1.000       0.500    453    24.3  1861     ERRALL 
     BURIED  . . . . . . . .   27.887      1.000       0.500    331    19.2  1728     ERRALL 
     CORE  . . . . . . . . .   21.249      1.000       0.500    299    20.1  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         2         5         6        10        29     163     493   DISTCA 
CA  (P)      0.41      1.01      1.22      2.03      5.88             493   DISTCA 
CA  (RMS)    0.89      1.25      1.43      2.76      6.24                   DISTCA 
 
ALL (N)         4        12        26        56       146     784    3589   DISTALL 
ALL (P)      0.11      0.33      0.72      1.56      4.07            3589   DISTALL 
ALL (RMS)    0.86      1.38      1.99      3.19      6.40                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207            62           101          RMSLSI 
CA  (P)       41.99         12.58         20.49          RMSLSI 
CA  (RMS)      1.49         23.50         39.11          RMSLSI 
 
 
 
END of the results output 
