 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 3215 atoms, 2970 common with TARGET 
           Number of atoms possible to evaluate: 1109 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    76.09           50.0   414    42.2   981     ARMSMC  
     WELL ORDERED  . . . . .    77.81           48.5   307    42.1   729     ARMSMC  
     NO INTER CONTACTS . . .    76.63           52.9   342    41.9   816     ARMSMC  
     SHIFTED CHAIN . . . . .    77.31           48.5   375    42.1   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    66.27           60.4   227    45.7   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    77.66           45.0   258    45.5   567     ARMSMC  
     LIGAND CONTACTS . . . .   133.68            0.0     3    30.0    10     ARMSMC  
     SURFACE . . . . . . . .    78.19           46.8   218    44.2   493     ARMSMC  
     BURIED  . . . . . . . .    73.67           53.6   196    40.2   488     ARMSMC  
     CORE  . . . . . . . . .    73.41           58.3   156    37.7   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   230     ARMSSC1 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   271     ARMSSC1 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0   179     ARMSSC2 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0   232     ARMSSC2 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    49     ARMSSC3 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     WELL ORDERED  . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
     NO INTER CONTACTS . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     CHANGED ANGLES  . . . .     0.00            0.0     0     0.0    33     ARMSSC4 
     SHIFTED CHAIN . . . . .     0.00            0.0     0     0.0    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS     0.00            0.0     0     0.0    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
     CORE  . . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.46477     r(1,2) =   0.73480     r(1,3) =  -0.49402 
 r(2,1) =   0.56954     r(2,2) =  -0.67530     r(2,3) =  -0.46862 
 r(3,1) =  -0.67795     r(3,2) =  -0.06356     r(3,3) =  -0.73235 
THE OFFSET VECTOR: 
 v(1) = -36.91518     v(2) =  18.49175     v(3) =  62.59422 
 
 Number of iteration 23                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.53           (Number of atoms:    8) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   23.75        228    46.2   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1042                            CRMSCA  
     WELL ORDERED  . . . . .   24.03        179    46.9   382     CRMSCA  
     NO INTER CONTACTS . . .   24.44        183    44.6   410     CRMSCA  
     SHIFTED CHAIN . . . . .   23.85        207    46.2   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .   24.50        125    50.2   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS   22.13        145    50.7   286     CRMSCA  
     LIGAND CONTACTS . . . .   12.22          3    50.0     6     CRMSCA  
     SURFACE . . . . . . . .   24.62        123    49.6   248     CRMSCA  
     BURIED  . . . . . . . .   22.69        105    42.9   245     CRMSCA  
     CORE  . . . . . . . . .   26.34         83    40.1   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   23.74       1109    45.9  2415     CRMSMC  
     WELL ORDERED  . . . . .   24.25        860    46.9  1834     CRMSMC  
     NO INTER CONTACTS . . .   24.42        886    44.2  2005     CRMSMC  
     SHIFTED CHAIN . . . . .   23.84       1005    45.8  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .   24.51        613    49.8  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS   21.97        701    50.1  1400     CRMSMC  
     LIGAND CONTACTS . . . .   13.79         11    42.3    26     CRMSMC  
     SURFACE . . . . . . . .   24.51        596    49.3  1209     CRMSMC  
     BURIED  . . . . . . . .   22.81        513    42.5  1206     CRMSMC  
     CORE  . . . . . . . . .   26.51        408    40.2  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   24.34        197    12.2  1617     CRMSSC  
     WELL ORDERED  . . . . .   24.55        157    13.5  1162     CRMSSC  
     NO INTER CONTACTS . . .   25.07        154    12.0  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .   24.34        197    14.8  1329     CRMSSC  
     CHANGED ANGLES  . . . .    0.00          0     0.0  1058     CRMSSC  
     SECONDARY STRUCTURE . .   24.82        113    12.7   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS   22.16        121    12.6   960     CRMSSC  
     LIGAND CONTACTS . . . .   17.88          2    10.0    20     CRMSSC  
     SURFACE . . . . . . . .   25.48        104    12.0   869     CRMSSC  
     BURIED  . . . . . . . .   22.99         93    12.4   748     CRMSSC  
     CORE  . . . . . . . . .   27.45         76    11.6   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   23.74       1109    30.9  3589     CRMSALL 
     WELL ORDERED  . . . . .   24.25        860    32.4  2655     CRMSALL 
     NO INTER CONTACTS . . .   24.42        886    30.3  2923     CRMSALL 
     SHIFTED CHAIN . . . . .   23.84       1005    30.8  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .   24.51        613    32.5  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS   21.97        701    33.3  2104     CRMSALL 
     LIGAND CONTACTS . . . .   13.79         11    26.8    41     CRMSALL 
     SURFACE . . . . . . . .   24.51        596    32.0  1861     CRMSALL 
     BURIED  . . . . . . . .   22.81        513    29.7  1728     CRMSALL 
     CORE  . . . . . . . . .   26.51        408    27.5  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     0.00      0     0.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2    44.83      3   100.0     3      43-RLD-45   
 CA  LOOP  3    36.83      5    62.5     8      69-MMAGLTEE-76   
 CA  LOOP  4     0.00      0     0.0     5     111-TATAD-115  
 CA  LOOP  5     0.00      0     0.0     5     123-GFGGE-127  
 CA  LOOP  6     9.56      8    72.7    11     131-HGANFDEAKAK-141  
 CA  LOOP  7     0.00      0     0.0     3     149-QGF-151  
 CA  LOOP  8    31.94      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9    18.98      5    33.3    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     0.00      0     0.0     4     236-GLFA-239  
 CA  LOOP 11    15.85     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12    10.94      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    21.24     98    53.3   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     0.00      0     0.0    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2    44.80     15   100.0    15      43-RLD-45   
 MC  LOOP  3    36.48     24    61.5    39      69-MMAGLTEE-76   
 MC  LOOP  4     0.00      0     0.0    25     111-TATAD-115  
 MC  LOOP  5     0.00      0     0.0    22     123-GFGGE-127  
 MC  LOOP  6     9.39     38    70.4    54     131-HGANFDEAKAK-141  
 MC  LOOP  7     0.00      0     0.0    14     149-QGF-151  
 MC  LOOP  8    31.86     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9    18.80     25    33.8    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     0.00      0     0.0    19     236-GLFA-239  
 MC  LOOP 11    16.04     63    96.9    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12    11.17     30   100.0    30     300-IALHNI-305  
 MC  LOOP 13    21.00    473    52.5   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     0.00      0     0.0   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2    44.80     15    55.6    27      43-RLD-45   
 ALL LOOP  3    36.48     24    41.4    58      69-MMAGLTEE-76   
 ALL LOOP  4     0.00      0     0.0    32     111-TATAD-115  
 ALL LOOP  5     0.00      0     0.0    32     123-GFGGE-127  
 ALL LOOP  6     9.39     38    50.7    75     131-HGANFDEAKAK-141  
 ALL LOOP  7     0.00      0     0.0    24     149-QGF-151  
 ALL LOOP  8    31.86     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9    18.80     25    25.8    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     0.00      0     0.0    19     236-GLFA-239  
 ALL LOOP 11    16.04     63    62.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12    11.17     30    63.8    47     300-IALHNI-305  
 ALL LOOP 13    21.00    473    34.4  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 CA  LOOP  2     0.22      3   100.0     3      43-RLD-45   
 CA  LOOP  3     2.01      5    62.5     8      69-MMAGLTEE-76   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 CA  LOOP  6     3.46      8    72.7    11     131-HGANFDEAKAK-141  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 CA  LOOP  8     3.71      5   100.0     5     202-QLMPQ-206  
 CA  LOOP  9     0.70      5    33.3    15     218-ACLKAALDAGHPVDL-232  
 WARNING! LOOP 10 cannot be considered (not enough atoms). 
 
 CA  LOOP 11     2.99     13   100.0    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     3.81      6   100.0     6     300-IALHNI-305  
 CA  LOOP 13    15.98     98    53.3   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 MC  LOOP  2     1.45     15   100.0    15      43-RLD-45   
 MC  LOOP  3     2.43     24    61.5    39      69-MMAGLTEE-76   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 MC  LOOP  6     3.59     38    70.4    54     131-HGANFDEAKAK-141  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 MC  LOOP  8     4.04     24    96.0    25     202-QLMPQ-206  
 MC  LOOP  9     1.89     25    33.8    74     218-ACLKAALDAGHPVDL-232  
 WARNING! LOOP 10 cannot be considered (not enough atoms). 
 
 MC  LOOP 11     3.30     63    96.9    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     3.98     30   100.0    30     300-IALHNI-305  
 MC  LOOP 13    15.79    473    52.5   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 WARNING! LOOP  1 cannot be considered (not enough atoms). 
 
 ALL LOOP  2     1.45     15    55.6    27      43-RLD-45   
 ALL LOOP  3     2.43     24    41.4    58      69-MMAGLTEE-76   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  5 cannot be considered (not enough atoms). 
 
 ALL LOOP  6     3.59     38    50.7    75     131-HGANFDEAKAK-141  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 ALL LOOP  8     4.04     24    58.5    41     202-QLMPQ-206  
 ALL LOOP  9     1.89     25    25.8    97     218-ACLKAALDAGHPVDL-232  
 WARNING! LOOP 10 cannot be considered (not enough atoms). 
 
 ALL LOOP 11     3.30     63    62.4   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     3.98     30    63.8    47     300-IALHNI-305  
 ALL LOOP 13    15.79    473    34.4  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   20.993      1.000       0.500    228    46.2   493     ERRCA  
     WELL ORDERED  . . . . .   21.530      1.000       0.500    179    46.9   382     ERRCA  
     NO INTER CONTACTS . . .   21.442      1.000       0.500    183    44.6   410     ERRCA  
     SHIFTED CHAIN . . . . .   20.988      1.000       0.500    207    46.2   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .   21.842      1.000       0.500    125    50.2   249     ERRCA  
     LARGE SHIFTS/INSERTIONS   19.655      1.000       0.500    145    50.7   286     ERRCA  
     LIGAND CONTACTS . . . .   11.948      1.000       0.500      3    50.0     6     ERRCA  
     SURFACE . . . . . . . .   21.504      1.000       0.500    123    49.6   248     ERRCA  
     BURIED  . . . . . . . .   20.395      1.000       0.500    105    42.9   245     ERRCA  
     CORE  . . . . . . . . .   23.331      1.000       0.500     83    40.1   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   20.994      1.000       0.500   1109    45.9  2415     ERRMC  
     WELL ORDERED  . . . . .   21.759      1.000       0.500    860    46.9  1834     ERRMC  
     NO INTER CONTACTS . . .   21.434      1.000       0.500    886    44.2  2005     ERRMC  
     SHIFTED CHAIN . . . . .   20.988      1.000       0.500   1005    45.8  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .   21.877      1.000       0.500    613    49.8  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS   19.531      1.000       0.500    701    50.1  1400     ERRMC  
     LIGAND CONTACTS . . . .   13.307      1.000       0.500     11    42.3    26     ERRMC  
     SURFACE . . . . . . . .   21.388      1.000       0.500    596    49.3  1209     ERRMC  
     BURIED  . . . . . . . .   20.538      1.000       0.500    513    42.5  1206     ERRMC  
     CORE  . . . . . . . . .   23.509      1.000       0.500    408    40.2  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   21.598      1.000       0.500    197    12.2  1617     ERRSC  
     WELL ORDERED  . . . . .   22.024      1.000       0.500    157    13.5  1162     ERRSC  
     NO INTER CONTACTS . . .   22.059      1.000       0.500    154    12.0  1283     ERRSC  
     RELIABLE SIDE CHAINS  .   21.598      1.000       0.500    197    14.8  1329     ERRSC  
     CHANGED ANGLES  . . . .    0.000      0.000       0.000      0     0.0  1058     ERRSC  
     SHIFTED CHAIN . . . . .   21.556      1.000       0.500    177    12.0  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .   22.252      1.000       0.500    113    12.7   891     ERRSC  
     LARGE SHIFTS/INSERTIONS   19.660      1.000       0.500    121    12.6   960     ERRSC  
     LIGAND CONTACTS . . . .   17.778      1.000       0.500      2    10.0    20     ERRSC  
     SURFACE . . . . . . . .   22.356      1.000       0.500    104    12.0   869     ERRSC  
     BURIED  . . . . . . . .   20.751      1.000       0.500     93    12.4   748     ERRSC  
     CORE  . . . . . . . . .   24.684      1.000       0.500     76    11.6   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   20.994      1.000       0.500   1109    30.9  3589     ERRALL 
     WELL ORDERED  . . . . .   21.759      1.000       0.500    860    32.4  2655     ERRALL 
     NO INTER CONTACTS . . .   21.434      1.000       0.500    886    30.3  2923     ERRALL 
     SHIFTED CHAIN . . . . .   20.988      1.000       0.500   1005    30.8  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .   21.877      1.000       0.500    613    32.5  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS   19.531      1.000       0.500    701    33.3  2104     ERRALL 
     LIGAND CONTACTS . . . .   13.307      1.000       0.500     11    26.8    41     ERRALL 
     SURFACE . . . . . . . .   21.388      1.000       0.500    596    32.0  1861     ERRALL 
     BURIED  . . . . . . . .   20.538      1.000       0.500    513    29.7  1728     ERRALL 
     CORE  . . . . . . . . .   23.509      1.000       0.500    408    27.5  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         1         7         8        10        30     228     493   DISTCA 
CA  (P)      0.20      1.42      1.62      2.03      6.09             493   DISTCA 
CA  (RMS)    0.44      1.39      1.53      2.37      5.96                   DISTCA 
 
ALL (N)         6        23        32        61       163    1109    3589   DISTALL 
ALL (P)      0.17      0.64      0.89      1.70      4.54            3589   DISTALL 
ALL (RMS)    0.62      1.28      1.72      3.11      6.46                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207            83           145          RMSLSI 
CA  (P)       41.99         16.84         29.41          RMSLSI 
CA  (RMS)      1.49         26.34         22.13          RMSLSI 
 
 
 
END of the results output 
