 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
CONANA-INTER           ../CONANA/T0002.inter 
CONANA-LIGAND          ../CONANA/T0002.ligand 
# 
NUMBER-OF-PARENTS      1 
ALIGNMENT-DALI(1)      ../PARENTS/casp2.T0002.1wsy_B.rot 
# 
ITER-CUTOFF            2.5       #    DISTANCE cutoff (for CA (iter))  
# 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           0         #    1 - ON, 0 - OFF  
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
ALIGNMENT-OUTPUT    0         #    1 - ON, 0 - OFF 
# 
# Calculation parameters 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff  
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff  
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)  
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
SC-SWAPPING         1         #    1 - ON, 0 - OFF  
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
LIGAND-DIST1        4.0       #    Ligand contact: contact with ligand cutoff 
LIGAND-DIST2        6.0       #    Ligand contact: protein neighborhood cutoff 
PARENT-DIST3        2.5       #    target-parent (dist > 2.5) 
# 
CRMS-METHOD         3         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
# 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
# Reading the coordinates set (1) 
 
 
# Evaluating the coordinates set (1) 
 
# WARNING! TARGET 3589 atoms, MODEL 3955 atoms, 3589 common with TARGET 
           Number of atoms possible to evaluate: 1501 
 
 
 CA-RMS TARGET<->PARENT(1wsy_B)	 2.508811 
 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    55.76           70.8   390    39.8   981     ARMSMC  
     WELL ORDERED  . . . . .    52.08           74.1   336    46.1   729     ARMSMC  
     NO INTER CONTACTS . . .    57.10           70.0   367    45.0   816     ARMSMC  
     SHIFTED CHAIN . . . . .    57.24           69.6   322    36.1   891     ARMSMC  
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSMC  
     SECONDARY STRUCTURE . .    35.30           81.1   259    52.1   497     ARMSMC  
     LARGE SHIFTS/INSERTIONS    69.08           58.1   105    18.5   567     ARMSMC  
     LIGAND CONTACTS . . . .    16.90          100.0    10   100.0    10     ARMSMC  
     SURFACE . . . . . . . .    73.33           58.2   153    31.0   493     ARMSMC  
     BURIED  . . . . . . . .    40.55           78.9   237    48.6   488     ARMSMC  
     CORE  . . . . . . . . .    49.96           75.4   285    68.8   414     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    85.07           34.5   142    41.9   339     ARMSSC1 
     WELL ORDERED  . . . . .    78.32           38.1   113    49.1   230     ARMSSC1 
     NO INTER CONTACTS . . .    84.51           34.1   129    47.6   271     ARMSSC1 
     RELIABLE SIDE CHAINS  .    85.66           32.5   123    40.6   303     ARMSSC1 
     CHANGED ANGLES  . . . .    90.22           27.0   100    36.9   271     ARMSSC1 
     SHIFTED CHAIN . . . . .    85.38           33.6   113    36.9   306     ARMSSC1 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SECONDARY STRUCTURE . .    85.09           35.4    99    52.9   187     ARMSSC1 
     LARGE SHIFTS/INSERTIONS    83.24           35.1    37    19.2   193     ARMSSC1 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC1 
     SURFACE . . . . . . . .    92.68           27.1    59    33.9   174     ARMSSC1 
     BURIED  . . . . . . . .    79.22           39.8    83    50.3   165     ARMSSC1 
     CORE  . . . . . . . . .    85.71           34.3   105    71.9   146     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    79.59           31.2   109    41.6   262     ARMSSC2 
     WELL ORDERED  . . . . .    79.52           29.9    87    48.6   179     ARMSSC2 
     NO INTER CONTACTS . . .    77.01           32.7    98    47.1   208     ARMSSC2 
     RELIABLE SIDE CHAINS  .    83.62           27.3    77    41.4   186     ARMSSC2 
     CHANGED ANGLES  . . . .    82.96           26.1    88    37.9   232     ARMSSC2 
     SHIFTED CHAIN . . . . .    78.47           35.5    93    38.3   243     ARMSSC2 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SECONDARY STRUCTURE . .    76.34           31.1    74    51.0   145     ARMSSC2 
     LARGE SHIFTS/INSERTIONS    75.17           36.4    33    21.3   155     ARMSSC2 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC2 
     SURFACE . . . . . . . .    75.45           31.5    54    36.0   150     ARMSSC2 
     BURIED  . . . . . . . .    83.46           30.9    55    49.1   112     ARMSSC2 
     CORE  . . . . . . . . .    81.43           28.9    76    71.0   107     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    87.93           25.0    40    43.0    93     ARMSSC3 
     WELL ORDERED  . . . . .    80.51           25.0    24    49.0    49     ARMSSC3 
     NO INTER CONTACTS . . .    88.07           22.9    35    50.0    70     ARMSSC3 
     RELIABLE SIDE CHAINS  .    81.04           30.3    33    43.4    76     ARMSSC3 
     CHANGED ANGLES  . . . .    91.35           18.9    37    43.0    86     ARMSSC3 
     SHIFTED CHAIN . . . . .    89.85           24.3    37    41.6    89     ARMSSC3 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SECONDARY STRUCTURE . .    85.46           21.4    28    50.0    56     ARMSSC3 
     LARGE SHIFTS/INSERTIONS    74.54           30.8    13    25.0    52     ARMSSC3 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
     SURFACE . . . . . . . .    89.48           28.0    25    38.5    65     ARMSSC3 
     BURIED  . . . . . . . .    85.28           20.0    15    53.6    28     ARMSSC3 
     CORE  . . . . . . . . .    93.69           22.2    27    65.9    41     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    72.14           31.2    16    45.7    35     ARMSSC4 
     WELL ORDERED  . . . . .    68.53           25.0     8    44.4    18     ARMSSC4 
     NO INTER CONTACTS . . .    69.37           30.8    13    50.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .    72.14           31.2    16    45.7    35     ARMSSC4 
     CHANGED ANGLES  . . . .    73.35           28.6    14    42.4    33     ARMSSC4 
     SHIFTED CHAIN . . . . .    61.79           38.5    13    40.6    32     ARMSSC4 
     ALTERNATIVE PARENT  . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SECONDARY STRUCTURE . .    53.81           36.4    11    52.4    21     ARMSSC4 
     LARGE SHIFTS/INSERTIONS    47.02           66.7     3    17.6    17     ARMSSC4 
     LIGAND CONTACTS . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
     SURFACE . . . . . . . .    71.71           33.3    12    46.2    26     ARMSSC4 
     BURIED  . . . . . . . .    73.40           25.0     4    44.4     9     ARMSSC4 
     CORE  . . . . . . . . .    76.78           23.1    13    72.2    18     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
UNITARY 3.3 RIGHT HANDED ROTATION MATRIX: 
 r(1,1) =   0.58885     r(1,2) =   0.24220     r(1,3) =  -0.77110 
 r(2,1) =  -0.79198     r(2,2) =   0.36336     r(2,3) =  -0.49065 
 r(3,1) =   0.16135     r(3,2) =   0.89961     r(3,3) =   0.40579 
THE OFFSET VECTOR: 
 v(1) = -58.91042     v(2) =  74.39200     v(3) =  -8.87520 
 
 Number of iteration 43                   (CUTOFF:  2.50) 
 TEST (CA iter) RMS =   1.39           (Number of atoms:  122) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    5.85        210    42.6   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0278                            CRMSCA  
     WELL ORDERED  . . . . .    5.74        185    48.4   382     CRMSCA  
     NO INTER CONTACTS . . .    5.95        197    48.0   410     CRMSCA  
     SHIFTED CHAIN . . . . .    5.89        174    38.8   448     CRMSCA  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSCA  
     SECONDARY STRUCTURE . .    5.14        138    55.4   249     CRMSCA  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSCA  
     LARGE SHIFTS/INSERTIONS    7.82         59    20.6   286     CRMSCA  
     LIGAND CONTACTS . . . .    1.50          6   100.0     6     CRMSCA  
     SURFACE . . . . . . . .    7.33         86    34.7   248     CRMSCA  
     BURIED  . . . . . . . .    4.55        124    50.6   245     CRMSCA  
     CORE  . . . . . . . . .    4.87        151    72.9   207     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    5.89       1023    42.4  2415     CRMSMC  
     WELL ORDERED  . . . . .    5.79        887    48.4  1834     CRMSMC  
     NO INTER CONTACTS . . .    5.99        958    47.8  2005     CRMSMC  
     SHIFTED CHAIN . . . . .    5.94        845    38.5  2192     CRMSMC  
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSMC  
     SECONDARY STRUCTURE . .    5.16        678    55.1  1230     CRMSMC  
     SHIFTED SS UNITS  . . .    0.00          0     0.0     0     CRMSMC  
     LARGE SHIFTS/INSERTIONS    7.86        286    20.4  1400     CRMSMC  
     LIGAND CONTACTS . . . .    3.02         25    96.2    26     CRMSMC  
     SURFACE . . . . . . . .    7.46        418    34.6  1209     CRMSMC  
     BURIED  . . . . . . . .    4.50        605    50.2  1206     CRMSMC  
     CORE  . . . . . . . . .    4.92        737    72.6  1015     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    6.72        661    40.9  1617     CRMSSC  
     WELL ORDERED  . . . . .    6.68        534    46.0  1162     CRMSSC  
     NO INTER CONTACTS . . .    6.82        592    46.1  1283     CRMSSC  
     RELIABLE SIDE CHAINS  .    6.96        535    40.3  1329     CRMSSC  
     CHANGED ANGLES  . . . .    6.87        408    38.6  1058     CRMSSC  
     SECONDARY STRUCTURE . .    6.22        457    51.3   891     CRMSSC  
     LARGE SHIFTS/INSERTIONS    8.08        192    20.0   960     CRMSSC  
     LIGAND CONTACTS . . . .    2.71         13    65.0    20     CRMSSC  
     SURFACE . . . . . . . .    8.37        302    34.8   869     CRMSSC  
     BURIED  . . . . . . . .    4.91        359    48.0   748     CRMSSC  
     CORE  . . . . . . . . .    6.07        469    71.4   657     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    6.22       1501    41.8  3589     CRMSALL 
     WELL ORDERED  . . . . .    6.13       1262    47.5  2655     CRMSALL 
     NO INTER CONTACTS . . .    6.30       1380    47.2  2923     CRMSALL 
     SHIFTED CHAIN . . . . .    6.34       1234    37.8  3267     CRMSALL 
     ALTERNATIVE PARENT  . .    0.00          0     0.0     0     CRMSALL 
     SECONDARY STRUCTURE . .    5.62       1009    53.5  1887     CRMSALL 
     LARGE SHIFTS/INSERTIONS    7.89        428    20.3  2104     CRMSALL 
     LIGAND CONTACTS . . . .    2.88         34    82.9    41     CRMSALL 
     SURFACE . . . . . . . .    7.82        646    34.7  1861     CRMSALL 
     BURIED  . . . . . . . .    4.66        855    49.5  1728     CRMSALL 
     CORE  . . . . . . . . .    5.41       1073    72.3  1485     CRMSALL 
 
 
RMS Details of loops: 
 
 GLOBAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1    12.26     12    60.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2     2.70      3   100.0     3      43-RLD-45   
 CA  LOOP  3     2.89      8   100.0     8      69-MMAGLTEE-76   
 CA  LOOP  4     0.00      0     0.0     5     111-TATAD-115  
 CA  LOOP  5     3.14      5   100.0     5     123-GFGGE-127  
 CA  LOOP  6     3.02      5    45.5    11     131-HGANFDEAKAK-141  
 CA  LOOP  7     0.00      0     0.0     3     149-QGF-151  
 CA  LOOP  8     0.00      0     0.0     5     202-QLMPQ-206  
 CA  LOOP  9    10.14      3    20.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10    13.52      4   100.0     4     236-GLFA-239  
 CA  LOOP 11     7.07      6    46.2    13     249-DETFRLCQEYLDD-261  
 CA  LOOP 12     5.21      2    33.3     6     300-IALHNI-305  
 CA  LOOP 13     4.58      8     4.3   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1    12.13     58    59.2    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2     2.84     15   100.0    15      43-RLD-45   
 MC  LOOP  3     3.05     39   100.0    39      69-MMAGLTEE-76   
 MC  LOOP  4     0.00      0     0.0    25     111-TATAD-115  
 MC  LOOP  5     3.09     22   100.0    22     123-GFGGE-127  
 MC  LOOP  6     2.98     25    46.3    54     131-HGANFDEAKAK-141  
 MC  LOOP  7     0.00      0     0.0    14     149-QGF-151  
 MC  LOOP  8     0.00      0     0.0    25     202-QLMPQ-206  
 MC  LOOP  9    10.52     15    20.3    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10    13.50     19   100.0    19     236-GLFA-239  
 MC  LOOP 11     7.36     30    46.2    65     249-DETFRLCQEYLDD-261  
 MC  LOOP 12     5.43     10    33.3    30     300-IALHNI-305  
 MC  LOOP 13     4.84     39     4.3   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1    11.63     85    59.9   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2     4.03     27   100.0    27      43-RLD-45   
 ALL LOOP  3     3.15     58   100.0    58      69-MMAGLTEE-76   
 ALL LOOP  4     0.00      0     0.0    32     111-TATAD-115  
 ALL LOOP  5     3.96     32   100.0    32     123-GFGGE-127  
 ALL LOOP  6     3.58     29    38.7    75     131-HGANFDEAKAK-141  
 ALL LOOP  7     0.00      0     0.0    24     149-QGF-151  
 ALL LOOP  8     0.00      0     0.0    41     202-QLMPQ-206  
 ALL LOOP  9    11.69     21    21.6    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10    13.50     19   100.0    19     236-GLFA-239  
 ALL LOOP 11     7.85     54    53.5   101     249-DETFRLCQEYLDD-261  
 ALL LOOP 12     6.27     13    27.7    47     300-IALHNI-305  
 ALL LOOP 13     6.26     68     4.9  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 LOCAL SUPERPOSITION 
 RMS:          CRMSCA     NP     PP     TN        LOOPS 
 CA  LOOP  1     3.16     12    60.0    20       9-GAPEGAEYLRAVLRAPVYEA-28   
 CA  LOOP  2     0.97      3   100.0     3      43-RLD-45   
 CA  LOOP  3     0.99      8   100.0     8      69-MMAGLTEE-76   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 CA  LOOP  5     0.57      5   100.0     5     123-GFGGE-127  
 CA  LOOP  6     0.16      5    45.5    11     131-HGANFDEAKAK-141  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 CA  LOOP  9     1.87      3    20.0    15     218-ACLKAALDAGHPVDL-232  
 CA  LOOP 10     0.26      4   100.0     4     236-GLFA-239  
 CA  LOOP 11     2.59      6    46.2    13     249-DETFRLCQEYLDD-261  
 WARNING! LOOP 12 cannot be considered (not enough atoms). 
 
 CA  LOOP 13     0.45      8     4.3   184     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSMC     NP     PP     TN        LOOPS 
 MC  LOOP  1     3.19     58    59.2    98       9-GAPEGAEYLRAVLRAPVYEA-28   
 MC  LOOP  2     1.44     15   100.0    15      43-RLD-45   
 MC  LOOP  3     1.13     39   100.0    39      69-MMAGLTEE-76   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 MC  LOOP  5     0.74     22   100.0    22     123-GFGGE-127  
 MC  LOOP  6     0.61     25    46.3    54     131-HGANFDEAKAK-141  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 MC  LOOP  9     2.69     15    20.3    74     218-ACLKAALDAGHPVDL-232  
 MC  LOOP 10     1.44     19   100.0    19     236-GLFA-239  
 MC  LOOP 11     3.02     30    46.2    65     249-DETFRLCQEYLDD-261  
 WARNING! LOOP 12 cannot be considered (not enough atoms). 
 
 MC  LOOP 13     0.64     39     4.3   901     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 RMS:          CRMSALL    NP     PP     TN        LOOPS 
 ALL LOOP  1     3.64     85    59.9   142       9-GAPEGAEYLRAVLRAPVYEA-28   
 ALL LOOP  2     2.20     27   100.0    27      43-RLD-45   
 ALL LOOP  3     2.10     58   100.0    58      69-MMAGLTEE-76   
 WARNING! LOOP  4 cannot be considered (not enough atoms). 
 
 ALL LOOP  5     1.51     32   100.0    32     123-GFGGE-127  
 ALL LOOP  6     1.17     29    38.7    75     131-HGANFDEAKAK-141  
 WARNING! LOOP  7 cannot be considered (not enough atoms). 
 
 WARNING! LOOP  8 cannot be considered (not enough atoms). 
 
 ALL LOOP  9     3.48     21    21.6    97     218-ACLKAALDAGHPVDL-232  
 ALL LOOP 10     1.44     19   100.0    19     236-GLFA-239  
 ALL LOOP 11     4.60     54    53.5   101     249-DETFRLCQEYLDD-261  
 WARNING! LOOP 12 cannot be considered (not enough atoms). 
 
 ALL LOOP 13     2.79     68     4.9  1377     318-NVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLGGRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGGYDCHDETNNPAFRFFLAG-514  
 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.942      0.369       0.233    210    42.6   493     ERRCA  
     WELL ORDERED  . . . . .    2.774      0.351       0.228    185    48.4   382     ERRCA  
     NO INTER CONTACTS . . .    3.000      0.371       0.234    197    48.0   410     ERRCA  
     SHIFTED CHAIN . . . . .    2.949      0.349       0.201    174    38.8   448     ERRCA  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRCA  
     SECONDARY STRUCTURE . .    2.340      0.326       0.217    138    55.4   249     ERRCA  
     LARGE SHIFTS/INSERTIONS    4.837      0.492       0.247     59    20.6   286     ERRCA  
     LIGAND CONTACTS . . . .    0.468      0.160       0.132      6   100.0     6     ERRCA  
     SURFACE . . . . . . . .    4.197      0.429       0.236     86    34.7   248     ERRCA  
     BURIED  . . . . . . . .    2.071      0.328       0.230    124    50.6   245     ERRCA  
     CORE  . . . . . . . . .    2.201      0.321       0.227    151    72.9   207     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.967      0.370       0.234   1023    42.4  2415     ERRMC  
     WELL ORDERED  . . . . .    2.808      0.353       0.230    887    48.4  1834     ERRMC  
     NO INTER CONTACTS . . .    3.018      0.370       0.235    958    47.8  2005     ERRMC  
     SHIFTED CHAIN . . . . .    2.987      0.355       0.207    845    38.5  2192     ERRMC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRMC  
     SECONDARY STRUCTURE . .    2.350      0.325       0.216    678    55.1  1230     ERRMC  
     LARGE SHIFTS/INSERTIONS    4.888      0.495       0.249    286    20.4  1400     ERRMC  
     LIGAND CONTACTS . . . .    1.123      0.221       0.162     25    96.2    26     ERRMC  
     SURFACE . . . . . . . .    4.324      0.440       0.241    418    34.6  1209     ERRMC  
     BURIED  . . . . . . . .    2.029      0.321       0.229    605    50.2  1206     ERRMC  
     CORE  . . . . . . . . .    2.221      0.321       0.228    737    72.6  1015     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.658      0.409       0.228    661    40.9  1617     ERRSC  
     WELL ORDERED  . . . . .    3.527      0.390       0.222    534    46.0  1162     ERRSC  
     NO INTER CONTACTS . . .    3.690      0.408       0.230    592    46.1  1283     ERRSC  
     RELIABLE SIDE CHAINS  .    3.866      0.420       0.232    535    40.3  1329     ERRSC  
     CHANGED ANGLES  . . . .    3.900      0.434       0.229    408    38.6  1058     ERRSC  
     SHIFTED CHAIN . . . . .    3.896      0.423       0.226    538    36.5  1475     ERRSC  
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRSC  
     SECONDARY STRUCTURE . .    3.262      0.384       0.216    457    51.3   891     ERRSC  
     LARGE SHIFTS/INSERTIONS    5.445      0.566       0.285    192    20.0   960     ERRSC  
     LIGAND CONTACTS . . . .    0.991      0.203       0.122     13    65.0    20     ERRSC  
     SURFACE . . . . . . . .    5.220      0.500       0.256    302    34.8   869     ERRSC  
     BURIED  . . . . . . . .    2.345      0.332       0.205    359    48.0   748     ERRSC  
     CORE  . . . . . . . . .    2.927      0.344       0.205    469    71.4   657     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.238      0.386       0.231   1501    41.8  3589     ERRALL 
     WELL ORDERED  . . . . .    3.081      0.369       0.228   1262    47.5  2655     ERRALL 
     NO INTER CONTACTS . . .    3.268      0.385       0.233   1380    47.2  2923     ERRALL 
     SHIFTED CHAIN . . . . .    3.349      0.383       0.215   1234    37.8  3267     ERRALL 
     ALTERNATIVE PARENT  . .    0.000      0.000       0.000      0     0.0     0     ERRALL 
     SECONDARY STRUCTURE . .    2.734      0.351       0.216   1009    53.5  1887     ERRALL 
     LARGE SHIFTS/INSERTIONS    5.078      0.523       0.263    428    20.3  2104     ERRALL 
     LIGAND CONTACTS . . . .    1.034      0.207       0.142     34    82.9    41     ERRALL 
     SURFACE . . . . . . . .    4.680      0.465       0.247    646    34.7  1861     ERRALL 
     BURIED  . . . . . . . .    2.149      0.327       0.220    855    49.5  1728     ERRALL 
     CORE  . . . . . . . . .    2.505      0.332       0.219   1073    72.3  1485     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        38       108       129       148       185     210     493   DISTCA 
CA  (P)      7.71     21.91     26.17     30.02     37.53             493   DISTCA 
CA  (RMS)    0.76      1.23      1.50      2.02      3.58                   DISTCA 
 
ALL (N)       215       640       831      1021      1312    1501    3589   DISTALL 
ALL (P)      5.99     17.83     23.15     28.45     36.56            3589   DISTALL 
ALL (RMS)    0.76      1.26      1.62      2.25      3.87                   DISTALL 
 
CA RMS: P<->T (parent <-> target), and T<->M (target <-> model) calculated using 
        CA positions for which there exists an alignment with principal parent, 
        and for which does not (LARGE SHIFTS/INSERTIONS): 
              P<->T         T<->M         T<->M (LSI) 
CA  (N)         207           151            59          RMSLSI 
CA  (P)       41.99         30.63         11.97          RMSLSI 
CA  (RMS)      1.49          4.87          7.82          RMSLSI 
 
 
 
END of the results output 
