 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 35 , MODEL 35 , TARGET 152 
#          The number of residues possible to evaluate: 35 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP    31     A     C     C             1.00 
 SSP    32     L     C     E             1.00 
 SSP    33     C     E     E             1.00 
 SSP    34     V     E     E             1.00 
 SSP    35     A     E     E             1.00 
 SSP    36     V     E     C             1.00 
 SSP  BREAK 
 SSP    43     Y     C     C             1.00 
 SSP    44     G     C     C             1.00 
 SSP    45     V     E     E             1.00 
 SSP    46     G     E     E             1.00 
 SSP    47     V     E     E             1.00 
 SSP    48     V     E     E             1.00 
 SSP    49     L     E     C             1.00 
 SSP  BREAK 
 SSP    53     A     C     C             1.00 
 SSP    54     I     C     C             1.00 
 SSP    55     E     C     C             1.00 
 SSP  BREAK 
 SSP    63     R     E     C             1.00 
 SSP    64     Y     E     E             1.00 
 SSP    65     T     E     E             1.00 
 SSP    66     A     E     E             1.00 
 SSP    67     T     C     C             1.00 
 SSP  BREAK 
 SSP    72     V     C     C             1.00 
 SSP    73     T     E     C             1.00 
 SSP    74     V     C     E             1.00 
 SSP    75     R     E     E             1.00 
 SSP    76     A     E     E             1.00 
 SSP    77     L     E     E             1.00 
 SSP    78     V     E     C             1.00 
 SSP  BREAK 
 SSP   106     F     E     C             1.00 
 SSP   107     T     E     E             1.00 
 SSP   108     A     E     C             1.00 
 SSP  BREAK 
 SSP   124     Q     E     C             1.00 
 SSP   125     I     E     C             1.00 
 SSP   126     A     E     E             1.00 
 SSP   127     F     E     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              65.7       0.0     60.0     80.0     23.0 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        75.7     100.0     76.0     75.0     23.0 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            6             100.0               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      35    100.0     65.7 
 
 BIN  0.00 - 1.00      1.00      35    100.0     65.7 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          34              34            34            152 
 ALL CONTACTS (< 8.0A)     119              70           119            762 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       119         43   36.13   61.43    5.64       0     0.00          70       762  |   1-9999 
 RES CONTACTS        46         41   89.13  100.00   13.27       0     0.00          41       309  |   1-4    
 RES CONTACTS         7          0    0.00    0.00    0.00       0     0.00           0        33  |   5-8    
 RES CONTACTS        66          2    3.03    6.90    0.48       0     0.00          29       420  |   9-9999 
 
 
 
# WARNING! TARGET 1087 atoms, MODEL 999 atoms, 999 common with TARGET 
           Number of atoms possible to evaluate: 172 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    52.01           58.9    56    18.5   302     ARMSMC  
     SECONDARY STRUCTURE . .    34.60           70.0    40    34.5   116     ARMSMC  
     SURFACE . . . . . . . .    51.29           70.6    17     9.3   182     ARMSMC  
     BURIED  . . . . . . . .    52.32           53.8    39    32.5   120     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   113     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    99     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    46     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    70     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    43     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    68     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    54     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    26     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    27     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    17     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    12     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     9     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    14     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0     3     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     3     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0     3     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1   31 - 36   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     31 - 36       0.85     0.85 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   43 - 49   7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     43 - 49       1.30     1.30 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   53 - 55   3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     53 - 55       0.66     0.66 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   63 - 67   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     63 - 67       0.34     0.34 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5   72 - 78   7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     72 - 78       1.59     1.59 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  106 - 108  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    106 - 108      0.24     0.24 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7  124 - 127  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    124 - 127      0.12     0.12 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1   31 - 36   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     31 - 36       0.85     0.85 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   43 - 49   7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     43 - 49       1.30     1.30 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   53 - 55   3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     53 - 55       0.66     0.66 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   63 - 67   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     63 - 67       0.34     0.34 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5   72 - 78   7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     72 - 78       1.59     1.59 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  106 - 108  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    106 - 108      0.24     0.24 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7  124 - 127  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    124 - 127      0.12     0.12 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1   31 - 36   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     31 - 36       0.85     0.85 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   43 - 49   7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     44 - 49       0.76     1.63 
  LCS LOCAL_SCORE:             81.63 
 
 FRAGMENT  3   53 - 55   3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     53 - 55       0.66     0.66 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4   63 - 67   5    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     63 - 67       0.34     0.34 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5   72 - 78   7    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     74 - 78       0.92     2.44 
  LCS LOCAL_SCORE:             65.31 
 
 FRAGMENT  6  106 - 108  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    106 - 108      0.24     0.24 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7  124 - 127  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    124 - 127      0.12     0.12 
  LCS LOCAL_SCORE:            100.00 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS      31       A     6    6    6       C        1   3   3   3   3   4   6   7   8   8   8   9  11  12  12  13  13  13  14  14  
 LCS      32       L     6    6    6       C        2   3   3   3   3   4   6   7   8   8   9   9  11  12  12  13  13  13  14  14  
 LCS      33       C     6    6    6       E        2   3   3   3   3   4   6   7   8   8   9   9  11  12  12  13  13  13  14  14  
 LCS      34       V     6    6    6       E        2   3   3   3   3   4   6   7   8   8   9   9  11  12  12  13  13  13  14  14  
 LCS      35       A     6    6    6       E        2   3   3   3   3   4   6   7   8   8   8   9   9   9   9  13  13  13  14  14  
 LCS      36       V     6    6    6       E        1   3   3   3   3   3   6   7   8   8   8   9   9   9   9   9  10  13  14  14  
 LCS      37       P     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      38       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      39       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      40       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      41       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      42       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      43       Y     4    7    7       C        1   2   3   3   4   4   4   4   6   7   9   9  11  12  12  13  13  13  14  14  
 LCS      44       G     6    7    7       C        1   3   3   3   4   4   6   7   8   8   9   9  11  12  12  13  13  13  14  14  
 LCS      45       V     6    7    7       E        1   3   3   3   4   4   6   7   8   8   9   9  11  12  12  13  13  13  14  14  
 LCS      46       G     6    7    7       E        2   3   3   3   4   5   6   7   8   8   9  10  10  12  12  13  13  13  14  14  
 LCS      47       V     6    7    7       E        2   3   3   3   4   5   7   7   8   8   9  10  10  10  10  10  10  11  11  13  
 LCS      48       V     6    7    7       E        2   3   3   3   4   4   6   7   8   8   8   9   9   9   9   9  10  10  11  11  
 LCS      49       L     6    7    7       E        2   3   3   3   4   4   4   4   8   8   8   9   9   9   9   9  10  10  11  11  
 LCS      50       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      51       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      52       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      53       A     3    3    3       C        0   1   1   1   1   1   1   1   1   3   3   4   4   5   7   8   9   9   9   9  
 LCS      54       I     3    3    3       C        0   1   1   1   1   1   1   3   3   3   4   4   4   5   7   8   9   9  11  11  
 LCS      55       E     3    3    3       C        0   1   1   1   1   1   1   3   3   3   4   4   4   4   7   7   8   9   9   9  
 LCS      56       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      57       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      58       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      59       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      60       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      61       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      62       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      63       R     5    5    5       E        3   3   3   5   6   6   7   7   8   8   9  10  10  10  10  10  10  11  11  11  
 LCS      64       Y     5    5    5       E        3   3   4   5   6   6   7   7   8   8   9  10  10  10  10  10  10  11  11  13  
 LCS      65       T     5    5    5       E        3   3   4   5   6   6   7   7   8   8   9  10  10  10  10  11  12  13  14  14  
 LCS      66       A     5    5    5       E        3   3   4   5   6   6   7   7   8   8   9  10  11  12  12  13  13  13  14  14  
 LCS      67       T     5    5    5       C        3   3   3   5   6   6   7   7   8   8   9  10  11  12  12  13  13  13  14  14  
 LCS      68       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      69       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      70       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      71       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      72       V     3    7    7       C        1   3   3   3   5   6   7   7   8   8   9  10  11  12  12  13  13  13  14  14  
 LCS      73       T     4    7    7       E        1   3   3   4   5   6   7   7   8   8   9  10  11  12  12  13  13  13  14  14  
 LCS      74       V     5    7    7       C        2   3   4   5   6   6   7   7   8   8   9  10  11  12  12  13  13  13  14  14  
 LCS      75       R     5    7    7       E        2   2   3   3   6   6   7   7   8   8   9  10  11  12  12  13  13  13  14  14  
 LCS      76       A     5    7    7       E        2   2   4   5   6   6   7   7   8   8   9  10  11  12  12  13  13  13  14  14  
 LCS      77       L     5    7    7       E        2   2   4   5   6   6   7   7   8   8   9  10  10  10  11  13  13  13  14  14  
 LCS      78       V     5    7    7       E        1   2   4   5   6   6   7   7   8   8   9  10  10  10  10  10  10  11  11  13  
 LCS      79       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      80       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      81       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      82       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      83       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      84       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      85       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      86       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      87       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      88       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      89       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      90       D     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      91       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      92       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      93       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      94       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      95       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      96       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      97       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      98       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      99       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     100       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     101       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     102       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     103       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     104       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     105       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     106       F     3    3    3       E        1   1   1   1   3   3   4   7   8   8   9  10  10  10  10  10  10  11  11  11  
 LCS     107       T     3    3    3       E        1   1   1   1   2   2   2   3   6   7   8  10  10  10  10  10  10  11  11  11  
 LCS     108       A     3    3    3       E        1   1   1   1   2   2   2   2   2   2   2   4   5   5   5   6   6  11  11  11  
 LCS     109       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     110       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     111       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     112       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     113       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     114       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     115       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     116       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     117       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     118       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     119       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     120       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     121       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     122       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     123       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     124       Q     4    4    4       E        2   3   3   3   3   4   5   5   6   7   8   9  11  12  12  13  13  13  14  14  
 LCS     125       I     4    4    4       E        2   2   2   3   3   4   5   6   6   7   9   9  11  12  12  13  13  13  14  14  
 LCS     126       A     4    4    4       E        2   2   2   2   2   2   5   5   6   7   9   9  11  12  12  13  13  13  14  14  
 LCS     127       F     4    4    4       E        2   2   2   2   2   2   2   3   3   3   4   9  11  12  12  13  13  13  14  14  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   0.72 
 
 NUMBER_OF_CA_Tg:  152      NUMBER_OF_CA_Pr:   35      PERCENT_OF_CA:  23.03  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       5       5       7       8      10      10      12      12      13      13      14      16      17      19      19      20      21      21      22      22  
 GDT PERCENT_OF_CA_Pr   14.29   14.29   20.00   22.86   28.57   28.57   34.29   34.29   37.14   37.14   40.00   45.71   48.57   54.29   54.29   57.14   60.00   60.00   62.86   62.86 
 GDT PERCENT_OF_CA_Tg    3.29    3.29    4.61    5.26    6.58    6.58    7.89    7.89    8.55    8.55    9.21   10.53   11.18   12.50   12.50   13.16   13.82   13.82   14.47   14.47 
 GDT FRAGMENT: Beg-End  63-67   63-67   64-78   64-78   63-78   63-78   63-78   63-78   63-106  63-106  46-106  46-107  31-127  31-127  31-127  31-127  31-127  31-127  31-127  31-127 
 GDT RMS_LOCAL           0.34    0.34    1.04    1.21    1.63    1.63    2.18    2.18    2.48    2.48    2.86    3.57    4.59    4.96    4.96    5.25    5.55    5.55    5.81    5.81 
 GDT RMS_ALL_CA         14.73   14.73   13.72   13.71   13.76   13.76   13.88   13.88   14.05   14.05   13.92   13.84   14.93   14.68   14.68   14.49   14.61   14.91   14.71   14.71 
 
 
 TEST (CA)  RMS =  13.03               (Number of atoms:   35) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   13.03         35    23.0   152     CRMSCA  
     CRN = ALL/NP  . . . . .    0.3724                            CRMSCA  
     SECONDARY STRUCTURE . .   11.31         24    41.4    58     CRMSCA  
     SURFACE . . . . . . . .   15.33         11    12.0    92     CRMSCA  
     BURIED  . . . . . . . .   11.83         24    40.0    60     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   13.35        172    23.2   742     CRMSMC  
     SECONDARY STRUCTURE . .   11.83        118    41.3   286     CRMSMC  
     SURFACE . . . . . . . .   15.68         55    12.2   449     CRMSMC  
     BURIED  . . . . . . . .   12.09        117    39.9   293     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   13.69         32     6.7   479     CRMSSC  
     RELIABLE SIDE CHAINS  .   13.69         32     7.7   413     CRMSSC  
     SECONDARY STRUCTURE . .   12.22         22    10.6   207     CRMSSC  
     SURFACE . . . . . . . .   16.23         11     3.9   281     CRMSSC  
     BURIED  . . . . . . . .   12.16         21    10.6   198     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   13.35        172    15.8  1087     CRMSALL 
     SECONDARY STRUCTURE . .   11.83        118    26.9   439     CRMSALL 
     SURFACE . . . . . . . .   15.68         55     8.5   649     CRMSALL 
     BURIED  . . . . . . . .   12.09        117    26.7   438     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.197      1.000       0.500     35    23.0   152     ERRCA  
     SECONDARY STRUCTURE . .   10.018      1.000       0.500     24    41.4    58     ERRCA  
     SURFACE . . . . . . . .   13.339      1.000       0.500     11    12.0    92     ERRCA  
     BURIED  . . . . . . . .   10.215      1.000       0.500     24    40.0    60     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.475      1.000       0.500    172    23.2   742     ERRMC  
     SECONDARY STRUCTURE . .   10.436      1.000       0.500    118    41.3   286     ERRMC  
     SURFACE . . . . . . . .   13.612      1.000       0.500     55    12.2   449     ERRMC  
     BURIED  . . . . . . . .   10.470      1.000       0.500    117    39.9   293     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.991      1.000       0.500     32     6.7   479     ERRSC  
     RELIABLE SIDE CHAINS  .   11.991      1.000       0.500     32     7.7   413     ERRSC  
     SECONDARY STRUCTURE . .   11.146      1.000       0.500     22    10.6   207     ERRSC  
     SURFACE . . . . . . . .   14.377      1.000       0.500     11     3.9   281     ERRSC  
     BURIED  . . . . . . . .   10.742      1.000       0.500     21    10.6   198     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.475      1.000       0.500    172    15.8  1087     ERRALL 
     SECONDARY STRUCTURE . .   10.436      1.000       0.500    118    26.9   439     ERRALL 
     SURFACE . . . . . . . .   13.612      1.000       0.500     55     8.5   649     ERRALL 
     BURIED  . . . . . . . .   10.470      1.000       0.500    117    26.7   438     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         2         9        15      35     152   DISTCA 
CA  (P)      0.00      0.00      1.32      5.92      9.87             152   DISTCA 
CA  (RMS)    0.00      0.00      2.61      3.81      5.78                   DISTCA 
 
ALL (N)         1         2        10        29        79     172    1087   DISTALL 
ALL (P)      0.09      0.18      0.92      2.67      7.27            1087   DISTALL 
ALL (RMS)    0.79      1.50      2.25      3.46      6.09                   DISTALL 
 
 
 
 
END of the results output 
