 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 75 , MODEL 75 , TARGET 221 
#          The number of residues possible to evaluate: 75 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP    75     Q     C     C             1.00 
 SSP    76     D     C     C             1.00 
 SSP    77     E     C     C             1.00 
 SSP    78     I     E     C             1.00 
 SSP    79     T     E     C             1.00 
 SSP    80     F     E     C             1.00 
 SSP  BREAK 
 SSP    82     A     E     C             1.00 
 SSP    83     Y     E     C             1.00 
 SSP    84     I     E     C             1.00 
 SSP    85     G     E     C             1.00 
 SSP    86     L     E     C             1.00 
 SSP    87     K     C     C             1.00 
 SSP    88     H     C     C             1.00 
 SSP    89     I     C     C             1.00 
 SSP    90     E     C     C             1.00 
 SSP    91     P     C     C             1.00 
 SSP  BREAK 
 SSP    93     I     H     H             1.00 
 SSP    94     E     H     H             1.00 
 SSP    95     D     H     H             1.00 
 SSP    96     A     H     H             1.00 
 SSP    97     V     H     H             1.00 
 SSP    98     A     H     H             1.00 
 SSP    99     E     H     H             1.00 
 SSP   100     M     H     H             1.00 
 SSP   101     H     H     H             1.00 
 SSP   102     K     H     H             1.00 
 SSP   103     D     C     H             1.00 
 SSP   104     G     C     C             1.00 
 SSP   105     I     C     C             1.00 
 SSP   106     T     C     E             1.00 
 SSP   107     E     E     E             1.00 
 SSP   108     A     E     E             1.00 
 SSP   109     V     E     E             1.00 
 SSP   110     S     E     C             1.00 
 SSP   111     I     E     C             1.00 
 SSP   112     V     E     E             1.00 
 SSP   113     L     C     E             1.00 
 SSP   114     A     C     H             1.00 
 SSP  BREAK 
 SSP   116     H     C     H             1.00 
 SSP   117     F     C     H             1.00 
 SSP   118     S     C     C             1.00 
 SSP   119     T     C     C             1.00 
 SSP   120     F     C     C             1.00 
 SSP   121     S     C     C             1.00 
 SSP   122     V     H     C             1.00 
 SSP   123     Q     H     C             1.00 
 SSP   124     S     H     C             1.00 
 SSP   125     Y     H     C             1.00 
 SSP  BREAK 
 SSP   127     K     H     C             1.00 
 SSP   128     R     H     C             1.00 
 SSP  BREAK 
 SSP   131     E     H     C             1.00 
 SSP   132     E     H     C             1.00 
 SSP   133     A     H     C             1.00 
 SSP   134     E     H     C             1.00 
 SSP   135     K     H     E             1.00 
 SSP   136     L     H     E             1.00 
 SSP   137     G     C     E             1.00 
 SSP   138     G     C     C             1.00 
 SSP   139     L     C     C             1.00 
 SSP   140     T     E     E             1.00 
 SSP   141     I     E     E             1.00 
 SSP   142     T     E     E             1.00 
 SSP   143     S     E     E             1.00 
 SSP   144     V     C     C             1.00 
 SSP   145     E     C     C             1.00 
 SSP  BREAK 
 SSP   147     W     C     C             1.00 
 SSP  BREAK 
 SSP   149     D     C     E             1.00 
 SSP   150     E     C     C             1.00 
 SSP   151     P     H     C             1.00 
 SSP   152     K     H     C             1.00 
 SSP   153     F     H     C             1.00 
 SSP   154     V     H     C             1.00 
 SSP   155     T     H     C             1.00 
 SSP   156     Y     H     E             1.00 
 SSP   157     W     H     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              50.7      34.5     44.4     71.4     33.9 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        48.5      34.5     41.7     68.8     33.9 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            6              50.0              33.3 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      75    100.0     50.7 
 
 BIN  0.00 - 1.00      1.00      75    100.0     50.7 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          68              68            68            221 
 ALL CONTACTS (< 8.0A)     206             211           206           1046 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       206        122   59.22   57.82   11.66       0     0.00         211      1046  |   1-9999 
 RES CONTACTS       134        116   86.57   78.91   17.90       0     0.00         147       648  |   1-4    
 RES CONTACTS        16          2   12.50   15.38    3.64       0     0.00          13        55  |   5-8    
 RES CONTACTS        56          4    7.14    7.84    1.17       0     0.00          51       343  |   9-9999 
 
 
 
# WARNING! TARGET 1785 atoms, MODEL 2253 atoms, 1544 common with TARGET 
           Number of atoms possible to evaluate: 364 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    82.45           49.3   134    30.5   440     ARMSMC  
     SECONDARY STRUCTURE . .    74.52           57.0    86    29.1   296     ARMSMC  
     SURFACE . . . . . . . .    84.22           46.8    79    28.0   282     ARMSMC  
     BURIED  . . . . . . . .    79.83           52.7    55    34.8   158     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   190     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   178     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   129     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   127     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    63     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   155     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   128     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   105     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   109     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    46     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    69     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    60     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    48     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    61     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     8     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    25     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    25     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    17     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    24     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     1     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1   75 - 80   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     75 - 80       1.15     1.15 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   82 - 91   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10     82 - 91       4.98     4.98 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3   93 - 114  22   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    21     93 - 113      4.69     5.25 
  LCS LOCAL_SCORE:             95.04 
 
 FRAGMENT  4  116 - 125  10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10    116 - 125      4.33     4.33 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  131 - 145  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    15    131 - 145      4.93     4.93 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  149 - 157  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    149 - 157      4.26     4.26 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1   75 - 80   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     75 - 80       1.15     1.15 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   82 - 91   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7     82 - 88       1.95     6.37 
  LCS LOCAL_SCORE:             61.00 
 
 FRAGMENT  3   93 - 114  22   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    13     93 - 105      1.33     6.58 
  LCS LOCAL_SCORE:             53.51 
 
 FRAGMENT  4  116 - 125  10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    120 - 124      1.84     8.77 
  LCS LOCAL_SCORE:             45.00 
 
 FRAGMENT  5  131 - 145  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10    136 - 145      1.72     5.78 
  LCS LOCAL_SCORE:             52.44 
 
 FRAGMENT  6  149 - 157  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    149 - 153      1.54     9.06 
  LONGEST_CONTINUOUS_SEGMENT     5    151 - 155      1.72     7.19 
  LCS LOCAL_SCORE:             50.62 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1   75 - 80   6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5     76 - 80       0.94     1.58 
  LCS LOCAL_SCORE:             80.56 
 
 FRAGMENT  2   82 - 91   10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6     83 - 88       0.66     6.75 
  LCS LOCAL_SCORE:             51.00 
 
 FRAGMENT  3   93 - 114  22   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    11     93 - 103      0.49     7.73 
  LCS LOCAL_SCORE:             36.36 
 
 FRAGMENT  4  116 - 125  10   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    116 - 118      0.59     7.11 
  LONGEST_CONTINUOUS_SEGMENT     3    118 - 120      0.24     9.54 
  LONGEST_CONTINUOUS_SEGMENT     3    119 - 121      0.39     9.78 
  LONGEST_CONTINUOUS_SEGMENT     3    120 - 122      0.23     8.51 
  LONGEST_CONTINUOUS_SEGMENT     3    121 - 123      0.98     9.95 
  LONGEST_CONTINUOUS_SEGMENT     3    122 - 124      0.63     9.28 
  LONGEST_CONTINUOUS_SEGMENT     3    123 - 125      0.53    11.49 
  LCS LOCAL_SCORE:             30.00 
 
 FRAGMENT  5  131 - 145  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     7    139 - 145      0.91     6.94 
  LCS LOCAL_SCORE:             33.33 
 
 FRAGMENT  6  149 - 157  9    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    149 - 152      0.87     9.56 
  LCS LOCAL_SCORE:             34.57 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS      75       Q     4    6    6       C        1   1   1   2   3   4   5   5   5   5   5   6   7   7   7   9  10  14  15  16  
 LCS      76       D     5    6    6       C        1   1   2   2   3   4   5   5   5   5   5   6   7   7   7  13  14  14  17  19  
 LCS      77       E     5    6    6       C        1   1   2   2   3   4   5   5   5   5   7   9  10  12  12  14  15  17  17  19  
 LCS      78       I     5    6    6       E        1   1   2   2   3   4   5   5   5   5   5   6   7   7  11  13  14  17  17  19  
 LCS      79       T     5    6    6       E        1   1   2   2   3   4   5   5   5   6   8   9  10  12  12  14  15  17  17  19  
 LCS      80       F     5    6    6       E        1   1   2   2   3   4   5   5   5   5   5   6   7   7   7  13  14  16  17  19  
 LCS      81       K     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      82       A     3    7   10       E        0   1   1   1   3   4   5   5   5   5   5   6   7   7   7   9  10  10  12  16  
 LCS      83       Y     6    7   10       E        1   2   2   2   2   4   5   5   5   5   5   6   7   7   7   9  10  10  12  12  
 LCS      84       I     6    7   10       E        1   2   2   2   2   4   5   5   5   5   5   6   7   7   7   9  10  10  12  12  
 LCS      85       G     6    7   10       E        1   2   2   2   2   4   5   5   5   5   5   6   7   7   7   9  10  10  12  12  
 LCS      86       L     6    7   10       E        1   2   2   2   2   4   5   5   5   5   5   6   7   7   7   9  10  10  12  12  
 LCS      87       K     6    7   10       C        1   2   2   2   2   2   5   5   5   5   5   6   7   7   8   9  10  10  12  12  
 LCS      88       H     6    7   10       C        1   2   2   2   2   2   2   3   3   3   4   4   4   5   7   8   9  10  12  12  
 LCS      89       I     4    4   10       C        1   1   1   1   2   2   2   3   3   3   4   7   7   7  10  13  14  16  17  19  
 LCS      90       E     4    4   10       C        1   1   1   1   3   5   6   7   7   8   9   9  11  13  14  15  15  17  17  19  
 LCS      91       P     4    4   10       C        1   1   3   5   5   6   6   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS      92       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      93       I    11   13   21       H        4   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS      94       E    11   13   21       H        4   4   4   5   5   6   7   7   9   9  10  11  12  13  14  15  15  17  17  19  
 LCS      95       D    11   13   21       H        4   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS      96       A    11   13   21       H        4   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS      97       V    11   13   21       H        4   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS      98       A    11   13   21       H        4   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS      99       E    11   13   21       H        4   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     100       M    11   13   21       H        4   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     101       H    11   13   21       H        4   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     102       K    11   13   21       H        3   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     103       D    11   13   21       C        2   4   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     104       G     4   13   21       C        1   1   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     105       I     4   13   21       C        1   1   4   5   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     106       T     6   10   21       C        2   2   2   3   4   4   6   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     107       E     6   10   21       E        2   2   2   3   4   5   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     108       A     6   10   21       E        2   2   2   3   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     109       V     6   10   21       E        2   2   2   3   5   6   7   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     110       S     6   10   21       E        2   2   2   3   4   4   4   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     111       I     6   10   21       E        1   2   2   3   4   4   4   5   8  10  11  12  13  14  14  15  15  17  17  19  
 LCS     112       V     4   10   21       E        1   1   2   3   4   4   4   5   5   8  11  12  13  14  14  15  15  17  17  19  
 LCS     113       L     4   10   21       C        1   1   2   3   4   4   4   5   5   6   7   8  13  14  14  15  15  17  17  19  
 LCS     114       A     3   10   19       C        0   1   2   2   3   4   4   5   5   6   7   8  13  14  14  15  15  17  17  19  
 LCS     115       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     116       H     3    4   10       C        0   1   1   1   4   4   6   7   8  10  11  12  13  14  14  15  15  17  17  19  
 LCS     117       F     3    4   10       C        1   1   3   3   4   5   6   7   8  10  11  12  13  14  14  15  15  17  17  19  
 LCS     118       S     3    4   10       C        1   1   1   1   1   2   4   5   6   8  11  11  13  14  14  15  15  17  17  19  
 LCS     119       T     3    4   10       C        1   1   1   1   1   2   4   4   7   9  11  11  13  14  14  15  15  17  17  19  
 LCS     120       F     3    5   10       C        1   1   1   1   2   2   2   2   4   5  10  11  13  14  14  15  15  17  17  19  
 LCS     121       S     3    5   10       C        1   1   1   1   2   2   3   3   4   4   5   7   7   8   9   9   9  16  16  16  
 LCS     122       V     3    5   10       H        1   1   1   1   2   2   3   4   4   4   5   5   6   7   7   9  15  16  16  18  
 LCS     123       Q     3    5   10       H        0   1   1   1   2   2   4   6   7   8  10  12  13  14  14  15  15  17  17  19  
 LCS     124       S     3    5   10       H        0   1   1   2   4   4   5   7   8  10  11  12  13  14  14  15  15  17  17  19  
 LCS     125       Y     3    4   10       H        0   1   1   2   2   3   4   5   8  10  11  12  13  14  14  15  15  17  17  19  
 LCS     126       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     127       K     0    0    0       H        0   0   1   1   2   2   3   3   4   4   9  10  10  11  13  14  15  17  17  19  
 LCS     128       R     0    0    0       H        0   0   1   2   2   2   3   3   4   4   5   5   6   7   8   8   9  10  13  14  
 LCS     129       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     130       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     131       E     0    3   15       H        0   0   1   1   1   2   2   2   3   3   4   5   6   7   7   8   8   9  10  11  
 LCS     132       E     3    3   15       H        0   0   1   2   2   2   3   3   3   4   4   5   6   7   7   8   8   8   9  11  
 LCS     133       A     3    3   15       H        0   1   1   2   2   2   3   3   3   4   4   4   4   4   7   8   8   8   9  11  
 LCS     134       E     3    3   15       H        0   1   1   2   2   2   2   2   3   4   4   4   6   7   7   8   8   9  10  11  
 LCS     135       K     4    6   15       H        1   1   1   2   2   3   4   4   4   4   5   5   6   7   7   8   8   9  10  11  
 LCS     136       L     4   10   15       H        1   1   1   3   4   4   4   4   4   4   5   5   6   7   7   8   8   9  10  11  
 LCS     137       G     4   10   15       C        1   1   3   3   4   4   4   4   4   4   5   5   6   7   7   8   8   9  10  11  
 LCS     138       G     5   10   15       C        1   1   2   3   3   4   4   4   4   4   5   5   6   7   7   8   8  10  10  11  
 LCS     139       L     7   10   15       C        2   2   3   3   4   4   4   4   4   4   5   5   6   7   7   8   9  10  10  11  
 LCS     140       T     7   10   15       E        2   2   3   3   4   4   4   4   4   4   5   5   6   7   9  11  12  12  13  16  
 LCS     141       I     7   10   15       E        1   2   3   3   4   4   5   7   9  10  11  12  13  14  14  15  15  17  17  19  
 LCS     142       T     7   10   15       E        2   2   3   3   4   4   4   6   8  10  11  12  13  14  14  15  15  17  17  19  
 LCS     143       S     7   10   15       E        2   2   3   3   4   4   4   4   4   6   7   8  10  13  13  15  15  17  17  19  
 LCS     144       V     7   10   15       C        2   2   3   3   4   4   4   4   4   4   5   5   6   7   8   8  10  12  14  15  
 LCS     145       E     7   10   15       C        1   2   3   3   4   4   4   4   4   4   5   5   6   7   8   8   9  10  10  11  
 LCS     146       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     147       W     0    0    0       C        0   0   0   2   3   3   4   4   4   4   5   5   6   7   8   8   9  10  10  11  
 LCS     148       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     149       D     4    5    9       C        1   1   1   1   2   2   3   4   4   4   5   5   6   7   8   8   9  10  10  11  
 LCS     150       E     4    5    9       C        1   1   1   2   3   3   4   4   4   4   5   5   6   7   8   8   9  10  10  10  
 LCS     151       P     4    5    9       H        1   1   1   1   3   3   4   4   4   4   5   5   6   7   8   8   9  10  10  10  
 LCS     152       K     4    5    9       H        1   1   1   1   3   3   4   4   4   4   5   5   6   7   8   8   9  10  10  10  
 LCS     153       F     3    5    9       H        1   1   1   1   2   2   4   4   4   4   5   5   6   7   8   8   9  10  10  10  
 LCS     154       V     3    5    9       H        1   1   1   1   1   2   3   3   4   4   4   5   6   7   8   8   9  10  10  10  
 LCS     155       T     3    5    9       H        0   1   1   1   1   2   2   2   3   3   3   3   4   6   6   6   8  10  10  10  
 LCS     156       Y     3    3    9       H        0   1   1   1   1   1   2   2   3   3   3   3   4   4   4   4   4   4   4   7  
 LCS     157       W     0    3    9       H        0   0   1   1   1   1   1   2   3   3   3   3   4   4   4   4   4   4   4   4  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   0.80 
 
 NUMBER_OF_CA_Tg:  221      NUMBER_OF_CA_Pr:   75      PERCENT_OF_CA:  33.94  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       9      11      11      13      13      14      16      17      20      23      25      27      30      32      33      35      35      39      39      42  
 GDT PERCENT_OF_CA_Pr   12.00   14.67   14.67   17.33   17.33   18.67   21.33   22.67   26.67   30.67   33.33   36.00   40.00   42.67   44.00   46.67   46.67   52.00   52.00   56.00 
 GDT PERCENT_OF_CA_Tg    4.07    4.98    4.98    5.88    5.88    6.33    7.24    7.69    9.05   10.41   11.31   12.22   13.57   14.48   14.93   15.84   15.84   17.65   17.65   19.00 
 GDT FRAGMENT: Beg-End  93-101  93-103  93-103  93-105  93-105  91-105  93-109  93-109  91-141  91-142  91-142  91-142  91-142  91-142  90-142  90-143  91-143  77-143  77-143  76-143 
 GDT RMS_LOCAL           0.21    0.49    0.49    1.33    1.33    1.56    2.42    2.59    3.17    4.07    4.29    4.51    4.99    5.15    5.33    5.53    5.51    6.24    6.24    6.73 
 GDT RMS_ALL_CA         18.84   18.42   18.42   18.14   18.14   18.10   19.19   19.33   18.58   17.61   17.56   17.53   17.61   17.83   17.52   17.59   17.75   17.35   17.35   17.33 
 
 
 TEST (CA)  RMS =  16.52               (Number of atoms:   75) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   16.52         75    33.9   221     CRMSCA  
     CRN = ALL/NP  . . . . .    0.2203                            CRMSCA  
     SECONDARY STRUCTURE . .   16.67         47    31.8   148     CRMSCA  
     SURFACE . . . . . . . .   17.36         45    31.7   142     CRMSCA  
     BURIED  . . . . . . . .   15.19         30    38.0    79     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   16.56        364    33.3  1092     CRMSMC  
     SECONDARY STRUCTURE . .   16.80        229    31.1   736     CRMSMC  
     SURFACE . . . . . . . .   17.36        218    31.1   700     CRMSMC  
     BURIED  . . . . . . . .   15.28        146    37.2   392     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   16.85         64     7.1   901     CRMSSC  
     RELIABLE SIDE CHAINS  .   16.85         64     8.1   789     CRMSSC  
     SECONDARY STRUCTURE . .   16.86         41     6.6   617     CRMSSC  
     SURFACE . . . . . . . .   17.82         38     6.2   616     CRMSSC  
     BURIED  . . . . . . . .   15.30         26     9.1   285     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   16.56        364    20.4  1785     CRMSALL 
     SECONDARY STRUCTURE . .   16.80        229    18.9  1209     CRMSALL 
     SURFACE . . . . . . . .   17.36        218    18.4  1184     CRMSALL 
     BURIED  . . . . . . . .   15.28        146    24.3   601     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.641      1.000       0.500     75    33.9   221     ERRCA  
     SECONDARY STRUCTURE . .   15.791      1.000       0.500     47    31.8   148     ERRCA  
     SURFACE . . . . . . . .   16.497      1.000       0.500     45    31.7   142     ERRCA  
     BURIED  . . . . . . . .   14.357      1.000       0.500     30    38.0    79     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.671      1.000       0.500    364    33.3  1092     ERRMC  
     SECONDARY STRUCTURE . .   15.912      1.000       0.500    229    31.1   736     ERRMC  
     SURFACE . . . . . . . .   16.479      1.000       0.500    218    31.1   700     ERRMC  
     BURIED  . . . . . . . .   14.466      1.000       0.500    146    37.2   392     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.882      1.000       0.500     64     7.1   901     ERRSC  
     RELIABLE SIDE CHAINS  .   15.882      1.000       0.500     64     8.1   789     ERRSC  
     SECONDARY STRUCTURE . .   15.943      1.000       0.500     41     6.6   617     ERRSC  
     SURFACE . . . . . . . .   16.919      1.000       0.500     38     6.2   616     ERRSC  
     BURIED  . . . . . . . .   14.365      1.000       0.500     26     9.1   285     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   15.671      1.000       0.500    364    20.4  1785     ERRALL 
     SECONDARY STRUCTURE . .   15.912      1.000       0.500    229    18.9  1209     ERRALL 
     SURFACE . . . . . . . .   16.479      1.000       0.500    218    18.4  1184     ERRALL 
     BURIED  . . . . . . . .   14.466      1.000       0.500    146    24.3   601     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         0         0        11      75     221   DISTCA 
CA  (P)      0.00      0.00      0.00      0.00      4.98             221   DISTCA 
CA  (RMS)    0.00      0.00      0.00      0.00      8.63                   DISTCA 
 
ALL (N)         0         0         0         0        61     364    1785   DISTALL 
ALL (P)      0.00      0.00      0.00      0.00      3.42            1785   DISTALL 
ALL (RMS)    0.00      0.00      0.00      0.00      8.72                   DISTALL 
 
 
 
 
END of the results output 
