 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 51 , MODEL 51 , TARGET 456 
#          The number of residues possible to evaluate: 51 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP   158     F     H     C             1.00 
 SSP   159     H     H     C             1.00 
 SSP   160     K     H     C             1.00 
 SSP   161     K     H     C             1.00 
 SSP   162     I     C     C             1.00 
 SSP   163     E     H     H             1.00 
 SSP   164     S     H     H             1.00 
 SSP   165     A     H     H             1.00 
 SSP   166     L     H     H             1.00 
 SSP   167     R     H     H             1.00 
 SSP   168     N     H     H             1.00 
 SSP   169     K     H     H             1.00 
 SSP   170     M     H     H             1.00 
 SSP   171     N     H     C             1.00 
 SSP   172     S     H     C             1.00 
 SSP   173     Q     H     C             1.00 
 SSP   174     V     H     C             1.00 
 SSP  BREAK 
 SSP   188     P     H     C             1.00 
 SSP   189     Y     H     C             1.00 
 SSP   190     F     C     C             1.00 
 SSP   191     Q     C     E             1.00 
 SSP   192     T     C     E             1.00 
 SSP   193     L     C     E             1.00 
 SSP   194     P     C     E             1.00 
 SSP   195     V     C     E             1.00 
 SSP  BREAK 
 SSP   252     R     C     E             1.00 
 SSP   253     M     C     E             1.00 
 SSP   254     V     E     E             1.00 
 SSP   255     Y     E     E             1.00 
 SSP   256     L     E     C             1.00 
 SSP   257     G     E     C             1.00 
 SSP   258     L     E     C             1.00 
 SSP   259     S     E     E             1.00 
 SSP   260     D     H     E             1.00 
 SSP   261     Y     H     E             1.00 
 SSP   262     F     H     E             1.00 
 SSP  BREAK 
 SSP   314     I     E     E             1.00 
 SSP   315     Q     E     E             1.00 
 SSP   316     I     E     E             1.00 
 SSP   317     H     E     E             1.00 
 SSP   318     V     E     C             1.00 
 SSP   319     S     E     C             1.00 
 SSP   320     A     E     C             1.00 
 SSP   321     S     C     C             1.00 
 SSP   322     T     C     C             1.00 
 SSP   323     P     C     C             1.00 
 SSP   324     P     C     C             1.00 
 SSP   325     H     E     E             1.00 
 SSP   326     L     E     E             1.00 
 SSP   327     S     E     E             1.00 
 SSP   328     V     E     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              47.1      38.1     58.8     46.2     11.2 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        55.2      57.1     62.3     39.5     11.2 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            6              66.7              16.7 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      51    100.0     47.1 
 
 BIN  0.00 - 1.00      1.00      51    100.0     47.1 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          49              49            49            456 
 ALL CONTACTS (< 8.0A)     189             113           189           2232 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       189         93   49.21   82.30    4.17       0     0.00         113      2232  |   1-9999 
 RES CONTACTS       101         91   90.10   84.26    8.12       0     0.00         108      1120  |   1-4    
 RES CONTACTS        17          0    0.00    0.00    0.00       0     0.00           1       110  |   5-8    
 RES CONTACTS        71          2    2.82   50.00    0.20       0     0.00           4      1002  |   9-9999 
 
 
 
# WARNING! TARGET 3510 atoms, MODEL 3404 atoms, 3346 common with TARGET 
           Number of atoms possible to evaluate: 252 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    67.83           50.0    94    10.3   910     ARMSMC  
     SECONDARY STRUCTURE . .    66.01           60.0    70    11.4   612     ARMSMC  
     SURFACE . . . . . . . .    57.45           56.5    46     8.9   514     ARMSMC  
     BURIED  . . . . . . . .    76.47           43.8    48    12.1   396     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   388     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   351     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   268     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   220     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   168     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   286     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   208     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   195     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   160     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   126     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    94     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    73     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    72     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    76     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    18     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    41     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    41     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    29     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    39     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     2     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1  158 - 174  17   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    17    158 - 174      4.12     4.12 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2  188 - 195  8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8    188 - 195      3.15     3.15 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  252 - 262  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8    252 - 259      4.39    10.53 
  LONGEST_CONTINUOUS_SEGMENT     8    255 - 262      4.22    10.91 
  LCS LOCAL_SCORE:             72.73 
 
 FRAGMENT  4  314 - 328  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    317 - 328      4.93    12.08 
  LCS LOCAL_SCORE:             76.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1  158 - 174  17   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    14    158 - 171      1.42     5.08 
  LCS LOCAL_SCORE:             71.63 
 
 FRAGMENT  2  188 - 195  8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    191 - 195      1.75     3.86 
  LCS LOCAL_SCORE:             53.12 
 
 FRAGMENT  3  252 - 262  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    252 - 257      1.77    12.19 
  LCS LOCAL_SCORE:             48.76 
 
 FRAGMENT  4  314 - 328  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8    321 - 328      1.94    15.28 
  LCS LOCAL_SCORE:             50.22 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1  158 - 174  17   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    160 - 171      0.83     5.25 
  LCS LOCAL_SCORE:             55.71 
 
 FRAGMENT  2  188 - 195  8    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    191 - 194      0.93     5.08 
  LCS LOCAL_SCORE:             43.75 
 
 FRAGMENT  3  252 - 262  11   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    253 - 256      0.61    13.10 
  LONGEST_CONTINUOUS_SEGMENT     4    254 - 257      0.87    11.75 
  LONGEST_CONTINUOUS_SEGMENT     4    257 - 260      0.91    14.47 
  LONGEST_CONTINUOUS_SEGMENT     4    258 - 261      0.87    14.04 
  LCS LOCAL_SCORE:             34.71 
 
 FRAGMENT  4  314 - 328  15   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    323 - 328      0.65    15.41 
  LCS LOCAL_SCORE:             34.67 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS     158       F     4   14   17       H        0   0   0   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     159       H     4   14   17       H        0   0   1   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     160       K    12   14   17       H        0   0   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     161       K    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     162       I    12   14   17       C        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     163       E    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     164       S    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     165       A    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     166       L    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     167       R    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     168       N    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     169       K    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     170       M    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     171       N    12   14   17       H        1   2   2   2   2   3   3   3   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     172       S     3    4   17       H        0   0   0   0   0   1   1   2   3   3   3   3   3   3   3   3   3   3   3   3  
 LCS     173       Q     3    4   17       H        0   0   0   0   0   0   1   1   1   1   2   2   3   3   3   3   3   3   3   3  
 LCS     174       V     3    3   17       H        0   0   0   0   0   0   1   1   1   1   2   2   3   3   3   3   3   3   3   3  
 LCS     175       C     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     176       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     177       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     178       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     179       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     180       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     181       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     182       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     183       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     184       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     185       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     186       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     187       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     188       P     3    3    8       H        0   0   0   0   0   0   0   0   1   1   1   2   2   2   2   2   3   3   3   3  
 LCS     189       Y     3    3    8       H        0   0   0   0   0   1   1   1   1   1   2   2   2   2   2   2   3   3   3   3  
 LCS     190       F     3    3    8       C        0   0   0   0   1   1   1   1   1   1   2   2   2   2   2   2   3   3   3   3  
 LCS     191       Q     4    5    8       C        0   0   0   0   1   1   1   1   1   1   2   2   2   2   2   2   3   3   3   3  
 LCS     192       T     4    5    8       C        0   0   0   0   1   1   1   1   1   1   2   2   2   2   2   2   3   3   3   3  
 LCS     193       L     4    5    8       C        0   0   0   0   1   1   1   1   1   1   2   2   2   2   2   2   3   3   3   3  
 LCS     194       P     4    5    8       C        0   0   0   0   1   1   1   1   1   1   2   2   2   2   2   2   3   3   3   3  
 LCS     195       V     3    5    8       C        0   0   0   0   1   1   1   1   1   1   2   2   2   2   2   2   3   3   3   3  
 LCS     196       M     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     197       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     198       K     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     199       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     200       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     201       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     202       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     203       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     204       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     205       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     206       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     207       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     208       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     209       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     210       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     211       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     212       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     213       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     214       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     215       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     216       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     217       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     218       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     219       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     220       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     221       D     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     222       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     223       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     224       M     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     225       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     226       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     227       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     228       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     229       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     230       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     231       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     232       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     233       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     234       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     235       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     236       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     237       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     238       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     239       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     240       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     241       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     242       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     243       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     244       M     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     245       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     246       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     247       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     248       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     249       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     250       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     251       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     252       R     3    6    8       C        0   0   0   0   1   1   1   1   1   1   1   1   1   1   1   2   3   3   3   3  
 LCS     253       M     4    6    8       C        0   0   0   1   1   1   1   1   1   1   1   1   1   2   2   2   3   3   3   3  
 LCS     254       V     4    6    8       E        0   0   0   1   1   1   1   1   1   1   1   1   2   2   2   2   3   3   3   3  
 LCS     255       Y     4    6    8       E        0   0   0   1   1   1   1   1   1   1   2   2   2   2   2   3   4   4   4   4  
 LCS     256       L     4    6    8       E        0   0   0   1   1   1   1   1   1   1   2   3   3   3   3   3   4   4   4   4  
 LCS     257       G     4    6    8       E        0   0   0   1   1   1   1   1   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     258       L     4    5    8       E        0   0   0   1   1   1   1   1   1   1   3   3   3   3   3   3   4   4   4   4  
 LCS     259       S     4    5    8       E        0   0   0   1   1   1   1   1   1   1   3   3   3   3   3   3   4   4   4   4  
 LCS     260       D     4    5    8       H        0   0   0   1   1   1   1   1   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     261       Y     4    5    8       H        0   0   0   1   1   1   1   1   1   1   1   3   3   3   3   3   4   4   4   4  
 LCS     262       F     3    3    8       H        0   0   0   0   0   0   1   1   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     263       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     264       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     265       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     266       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     267       G     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     268       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     269       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     270       Y     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     271       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     272       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     273       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     274       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     275       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     276       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     277       K     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     278       M     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     279       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     280       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     281       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     282       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     283       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     284       M     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     285       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     286       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     287       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     288       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     289       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     290       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     291       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     292       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     293       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     294       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     295       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     296       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     297       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     298       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     299       G     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     300       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     301       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     302       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     303       P     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     304       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     305       V     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     306       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     307       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     308       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     309       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     310       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     311       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     312       M     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     313       K     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     314       I     5    7    9       E        0   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1  
 LCS     315       Q     5    7    9       E        0   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   2  
 LCS     316       I     5    7    9       E        0   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   1   2  
 LCS     317       H     5    7   12       E        0   1   1   1   1   1   1   1   1   1   1   1   1   1   2   2   2   2   2   3  
 LCS     318       V     5    7   12       E        0   1   1   1   1   1   1   1   1   1   1   1   2   2   2   3   4   4   4   4  
 LCS     319       S     5    7   12       E        0   0   1   1   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     320       A     4    7   12       E        0   0   0   1   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     321       S     4    8   12       C        0   0   0   0   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     322       T     4    8   12       C        0   0   1   1   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     323       P     6    8   12       C        0   1   1   1   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     324       P     6    8   12       C        0   1   1   1   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     325       H     6    8   12       E        0   1   1   1   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     326       L     6    8   12       E        0   1   1   1   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     327       S     6    8   12       E        0   1   1   1   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     328       V     6    8   12       E        0   1   1   1   1   1   2   2   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   0.15 
 
 NUMBER_OF_CA_Tg:  456      NUMBER_OF_CA_Pr:   51      PERCENT_OF_CA:  11.18  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       9      11      11      13      13      14      14      14      14      15      15      17      17      17      17      18      19      19      19      19  
 GDT PERCENT_OF_CA_Pr   17.65   21.57   21.57   25.49   25.49   27.45   27.45   27.45   27.45   29.41   29.41   33.33   33.33   33.33   33.33   35.29   37.25   37.25   37.25   37.25 
 GDT PERCENT_OF_CA_Tg    1.97    2.41    2.41    2.85    2.85    3.07    3.07    3.07    3.07    3.29    3.29    3.73    3.73    3.73    3.73    3.95    4.17    4.17    4.17    4.17 
 GDT FRAGMENT: Beg-End 162-171 161-171 161-171 159-171 159-171 158-171 158-171 158-171 158-171 158-172 158-172 256-328 256-328 256-328 256-328 256-328 255-328 255-328 255-328 255-328 
 GDT RMS_LOCAL           0.33    0.49    0.49    1.15    1.15    1.42    1.42    1.42    1.42    2.24    2.24    2.24    2.24    4.01    3.42    4.12    4.27    4.55    4.55    4.55 
 GDT RMS_ALL_CA         54.74   54.99   54.99   55.36   55.36   54.81   54.81   54.81   54.81   54.20   54.20   54.20   54.20   53.33   54.08   53.67   43.69   43.66   43.66   43.66 
 
 
 TEST (CA)  RMS =  27.60               (Number of atoms:   51) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   27.60         51    11.2   456     CRMSCA  
     CRN = ALL/NP  . . . . .    0.5411                            CRMSCA  
     SECONDARY STRUCTURE . .   29.45         38    12.4   306     CRMSCA  
     SURFACE . . . . . . . .   28.88         24     9.3   258     CRMSCA  
     BURIED  . . . . . . . .   26.40         27    13.6   198     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   27.51        252    11.2  2254     CRMSMC  
     SECONDARY STRUCTURE . .   29.39        187    12.4  1511     CRMSMC  
     SURFACE . . . . . . . .   28.83        119     9.3  1282     CRMSMC  
     BURIED  . . . . . . . .   26.26        133    13.7   972     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   28.35         48     2.8  1686     CRMSSC  
     RELIABLE SIDE CHAINS  .   28.35         48     3.4  1392     CRMSSC  
     SECONDARY STRUCTURE . .   30.40         35     3.0  1184     CRMSSC  
     SURFACE . . . . . . . .   29.16         23     2.4   939     CRMSSC  
     BURIED  . . . . . . . .   27.59         25     3.3   747     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   27.51        252     7.2  3510     CRMSALL 
     SECONDARY STRUCTURE . .   29.39        187     7.8  2408     CRMSALL 
     SURFACE . . . . . . . .   28.83        119     6.0  1971     CRMSALL 
     BURIED  . . . . . . . .   26.26        133     8.6  1539     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   24.592      1.000       0.500     51    11.2   456     ERRCA  
     SECONDARY STRUCTURE . .   26.952      1.000       0.500     38    12.4   306     ERRCA  
     SURFACE . . . . . . . .   25.974      1.000       0.500     24     9.3   258     ERRCA  
     BURIED  . . . . . . . .   23.363      1.000       0.500     27    13.6   198     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   24.512      1.000       0.500    252    11.2  2254     ERRMC  
     SECONDARY STRUCTURE . .   26.906      1.000       0.500    187    12.4  1511     ERRMC  
     SURFACE . . . . . . . .   25.890      1.000       0.500    119     9.3  1282     ERRMC  
     BURIED  . . . . . . . .   23.278      1.000       0.500    133    13.7   972     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   25.250      1.000       0.500     48     2.8  1686     ERRSC  
     RELIABLE SIDE CHAINS  .   25.250      1.000       0.500     48     3.4  1392     ERRSC  
     SECONDARY STRUCTURE . .   27.851      1.000       0.500     35     3.0  1184     ERRSC  
     SURFACE . . . . . . . .   26.156      1.000       0.500     23     2.4   939     ERRSC  
     BURIED  . . . . . . . .   24.416      1.000       0.500     25     3.3   747     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   24.512      1.000       0.500    252     7.2  3510     ERRALL 
     SECONDARY STRUCTURE . .   26.906      1.000       0.500    187     7.8  2408     ERRALL 
     SURFACE . . . . . . . .   25.890      1.000       0.500    119     6.0  1971     ERRALL 
     BURIED  . . . . . . . .   23.278      1.000       0.500    133     8.6  1539     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         0         1         9      51     456   DISTCA 
CA  (P)      0.00      0.00      0.00      0.22      1.97             456   DISTCA 
CA  (RMS)    0.00      0.00      0.00      4.31      7.06                   DISTCA 
 
ALL (N)         0         0         0         4        46     252    3510   DISTALL 
ALL (P)      0.00      0.00      0.00      0.11      1.31            3510   DISTALL 
ALL (RMS)    0.00      0.00      0.00      4.42      7.17                   DISTALL 
 
 
 
 
END of the results output 
