 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 43 , MODEL 43 , TARGET 248 
#          The number of residues possible to evaluate: 43 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     2     Q     C     C             1.00 
 SSP     3     I     E     E             1.00 
 SSP     4     H     E     C             1.00 
 SSP  BREAK 
 SSP    28     K     C     C             1.00 
 SSP    29     P     C     C             1.00 
 SSP  BREAK 
 SSP    40     C     E     C             1.00 
 SSP    41     E     E     E             1.00 
 SSP    42     I     E     C             1.00 
 SSP  BREAK 
 SSP    49     W     E     C             1.00 
 SSP    50     T     E     C             1.00 
 SSP  BREAK 
 SSP    84     F     E     C             1.00 
 SSP    85     W     E     C             1.00 
 SSP  BREAK 
 SSP   105     R     E     C             1.00 
 SSP   106     V     E     E             1.00 
 SSP   107     E     E     C             1.00 
 SSP  BREAK 
 SSP   122     M     C     C             1.00 
 SSP   123     F     C     C             1.00 
 SSP   124     K     E     C             1.00 
 SSP  BREAK 
 SSP   137     A     C     C             1.00 
 SSP   138     Y     E     E             1.00 
 SSP   139     F     E     C             1.00 
 SSP  BREAK 
 SSP   164     S     C     C             1.00 
 SSP  BREAK 
 SSP   171     S     E     C             1.00 
 SSP   172     T     E     E             1.00 
 SSP   173     W     C     C             1.00 
 SSP  BREAK 
 SSP   182     G     C     C             1.00 
 SSP   183     N     C     H             1.00 
 SSP   184     C     H     H             1.00 
 SSP   185     A     H     H             1.00 
 SSP   186     E     H     H             1.00 
 SSP   187     Q     H     C             1.00 
 SSP  BREAK 
 SSP   194     M     C     C             1.00 
 SSP  BREAK 
 SSP   199     A     C     C             1.00 
 SSP   200     G     E     C             1.00 
 SSP   201     H     E     C             1.00 
 SSP   202     L     C     C             1.00 
 SSP  BREAK 
 SSP   229     T     C     C             1.00 
 SSP   230     W     C     C             1.00 
 SSP  BREAK 
 SSP   235     Y     E     C             1.00 
 SSP   236     S     C     C             1.00 
 SSP   237     M     C     C             1.00 
 SSP  BREAK 
 SSP   243     K     E     C             1.00 
 SSP   244     I     E     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              55.8      75.0     22.7     94.1     17.3 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        54.7     100.0     22.7     85.3     17.3 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           11              36.4               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      43    100.0     55.8 
 
 BIN  0.00 - 1.00      1.00      43    100.0     55.8 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          43              43            43            249 
 ALL CONTACTS (< 8.0A)     113              73           113           1264 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       113         43   38.05   58.90    3.40       0     0.00          73      1264  |   1-9999 
 RES CONTACTS        44         40   90.91   97.56    7.02       0     0.00          41       570  |   1-4    
 RES CONTACTS         5          1   20.00   33.33    1.23       0     0.00           3        81  |   5-8    
 RES CONTACTS        64          2    3.12    6.90    0.33       0     0.00          29       613  |   9-9999 
 
 
 
# WARNING! TARGET 1995 atoms, MODEL 1981 atoms, 1840 common with TARGET 
           Number of atoms possible to evaluate: 213 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    56.47           63.0    54    10.9   496     ARMSMC  
     SECONDARY STRUCTURE . .    23.57           72.2    18    11.7   154     ARMSMC  
     SURFACE . . . . . . . .    69.79           50.0    22     8.8   251     ARMSMC  
     BURIED  . . . . . . . .    45.09           71.9    32    13.1   245     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   205     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   199     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    67     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   106     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    99     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   164     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   131     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    52     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    86     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    78     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    51     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    40     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    17     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    39     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    12     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    26     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0     7     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    22     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     4     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    2 - 4    3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3      2 - 4        0.51     0.51 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   40 - 42   3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     40 - 42       0.46     0.46 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  105 - 107  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    105 - 107      0.29     0.29 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4  122 - 124  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    122 - 124      0.14     0.14 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  137 - 139  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    137 - 139      0.60     0.60 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  171 - 173  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    171 - 173      0.29     0.29 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7  182 - 187  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    182 - 187      1.91     1.91 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  8  199 - 202  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    199 - 202      0.47     0.47 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  9  235 - 237  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    235 - 237      0.00     0.01 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    2 - 4    3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3      2 - 4        0.51     0.51 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   40 - 42   3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     40 - 42       0.46     0.46 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  105 - 107  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    105 - 107      0.29     0.29 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4  122 - 124  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    122 - 124      0.14     0.14 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  137 - 139  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    137 - 139      0.60     0.60 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  171 - 173  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    171 - 173      0.29     0.29 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7  182 - 187  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     6    182 - 187      1.91     1.91 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  8  199 - 202  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    199 - 202      0.47     0.47 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  9  235 - 237  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    235 - 237      0.00     0.01 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    2 - 4    3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3      2 - 4        0.51     0.51 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2   40 - 42   3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3     40 - 42       0.46     0.46 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  105 - 107  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    105 - 107      0.29     0.29 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  4  122 - 124  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    122 - 124      0.14     0.14 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  5  137 - 139  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    137 - 139      0.60     0.60 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  6  171 - 173  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    171 - 173      0.29     0.29 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  7  182 - 187  6    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     5    183 - 187      0.21     2.74 
  LCS LOCAL_SCORE:             77.78 
 
 FRAGMENT  8  199 - 202  4    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     4    199 - 202      0.47     0.47 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  9  235 - 237  3    Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     3    235 - 237      0.00     0.01 
  LCS LOCAL_SCORE:            100.00 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       2       Q     3    3    3       C        0   1   1   1   2   2   2   2   3   3   4   4   5   5   6   7   8   8   8   8  
 LCS       3       I     3    3    3       E        0   1   1   1   2   2   2   2   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS       4       H     3    3    3       E        0   1   1   1   2   2   2   3   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS       5       D     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS       6       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS       7       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS       8       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS       9       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      10       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      11       C     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      12       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      13       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      14       I     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      15       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      16       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      17       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      18       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      19       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      20       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      21       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      22       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      23       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      24       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      25       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      26       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      27       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      28       K     0    0    0       C        0   1   1   1   2   2   2   3   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS      29       P     0    0    0       C        0   0   0   0   0   0   1   1   1   1   1   4   5   5   6   7   8   8   8   9  
 LCS      30       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      31       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      32       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      33       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      34       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      35       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      36       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      37       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      38       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      39       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      40       C     3    3    3       E        1   1   1   1   1   2   2   3   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS      41       E     3    3    3       E        1   1   1   1   1   2   2   2   2   3   4   4   4   5   6   7   8   8   8   9  
 LCS      42       I     3    3    3       E        1   1   1   1   1   2   2   2   2   2   3   3   4   4   5   6   6   7   7   9  
 LCS      43       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      44       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      45       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      46       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      47       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      48       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      49       W     0    0    0       E        0   0   1   1   1   1   2   2   2   2   3   3   3   5   6   7   8   8   8   9  
 LCS      50       T     0    0    0       E        0   0   1   1   2   2   2   3   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS      51       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      52       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      53       Q     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      54       K     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      55       R     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      56       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      57       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      58       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      59       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      60       V     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      61       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      62       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      63       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      64       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      65       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      66       W     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      67       I     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      68       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      69       Y     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      70       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      71       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      72       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      73       F     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      74       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      75       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      76       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      77       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      78       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      79       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      80       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      81       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      82       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      83       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      84       F     0    0    0       E        0   0   0   0   0   1   2   2   2   2   2   2   5   5   6   7   8   8   8   9  
 LCS      85       W     0    0    0       E        0   0   0   0   0   1   1   1   2   2   2   2   2   5   6   7   8   8   8   9  
 LCS      86       L     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      87       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      88       N     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      89       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      90       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      91       I     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      92       H     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      93       L     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      94       I     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      95       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      96       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      97       Q     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      98       S     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS      99       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     100       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     101       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     102       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     103       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     104       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     105       R     3    3    3       E        1   1   1   1   1   1   1   1   1   2   2   3   3   4   4   5   6   7   7   7  
 LCS     106       V     3    3    3       E        1   1   1   1   1   1   1   1   1   2   2   3   3   4   4   5   6   7   7   7  
 LCS     107       E     3    3    3       E        1   1   1   1   1   1   1   1   1   2   2   3   3   4   4   5   6   7   8   8  
 LCS     108       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     109       E     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     110       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     111       W     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     112       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     113       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     114       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     115       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     116       S     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     117       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     118       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     119       D     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     120       Y     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     121       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     122       M     3    3    3       C        1   1   1   1   1   1   1   1   1   2   2   2   2   2   6   6   6   6   6   6  
 LCS     123       F     3    3    3       C        1   1   1   1   2   2   2   2   2   2   2   2   4   4   6   6   6   6   6   6  
 LCS     124       K     3    3    3       E        1   1   1   1   2   2   2   2   2   2   3   3   4   4   6   6   6   6   6   6  
 LCS     125       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     126       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     127       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     128       E     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     129       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     130       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     131       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     132       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     133       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     134       L     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     135       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     136       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     137       A     3    3    3       C        0   1   1   1   2   2   2   2   2   2   2   2   3   3   3   3   4   5   5   5  
 LCS     138       Y     3    3    3       E        0   1   1   1   2   2   2   2   2   2   3   3   3   3   3   3   4   5   5   5  
 LCS     139       F     3    3    3       E        0   1   1   1   2   2   2   2   2   2   2   2   2   2   2   3   4   5   5   5  
 LCS     140       A     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     141       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     142       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     143       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     144       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     145       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     146       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     147       A     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     148       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     149       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     150       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     151       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     152       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     153       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     154       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     155       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     156       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     157       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     158       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     159       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     160       K     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     161       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     162       F     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     163       T     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     164       S     0    0    0       C        0   0   1   1   1   1   2   2   2   2   3   3   4   4   6   6   6   6   6   6  
 LCS     165       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     166       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     167       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     168       M     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     169       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     170       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     171       S     3    3    3       E        1   1   1   1   1   1   2   2   2   2   3   4   5   5   6   7   8   8   8   8  
 LCS     172       T     3    3    3       E        1   1   1   1   1   1   2   2   2   3   3   4   4   4   6   7   8   8   8   9  
 LCS     173       W     3    3    3       C        1   1   1   1   1   1   1   1   2   3   3   4   4   4   6   6   6   6   7   9  
 LCS     174       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     175       N     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     176       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     177       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     178       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     179       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     180       F     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     181       E     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     182       G     3    6    6       C        1   1   1   1   1   2   3   3   3   3   3   3   3   3   5   6   6   6   6   6  
 LCS     183       N     5    6    6       C        2   2   2   2   2   2   3   3   3   3   3   4   4   4   6   6   6   6   6   7  
 LCS     184       C     5    6    6       H        2   2   2   2   2   2   3   3   3   3   3   4   4   4   6   6   6   7   7   9  
 LCS     185       A     5    6    6       H        2   2   2   2   2   2   3   3   3   3   3   4   4   4   6   6   6   7   7   9  
 LCS     186       E     5    6    6       H        2   2   2   2   2   2   3   3   3   3   3   4   4   4   6   6   6   7   7   8  
 LCS     187       Q     5    6    6       H        2   2   2   2   2   2   3   3   3   3   3   4   4   4   6   6   6   6   6   7  
 LCS     188       D     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     189       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     190       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     191       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     192       W     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     193       W     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     194       M     0    0    0       C        0   0   0   1   2   2   3   3   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS     195       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     196       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     197       C     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     198       H     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     199       A     4    4    4       C        1   1   2   2   2   2   3   3   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS     200       G     4    4    4       E        1   1   1   1   2   2   2   3   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS     201       H     4    4    4       E        1   1   1   1   2   2   2   3   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS     202       L     4    4    4       C        1   1   1   1   2   2   2   2   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS     203       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     204       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     205       V     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     206       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     207       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     208       Q     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     209       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     210       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     211       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     212       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     213       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     214       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     215       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     216       S     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     217       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     218       P     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     219       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     220       G     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     221       Y     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     222       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     223       N     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     224       G     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     225       I     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     226       I     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     227       W     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     228       A     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     229       T     0    0    0       C        0   1   1   1   1   1   2   2   2   2   3   3   4   4   4   4   6   6   7   7  
 LCS     230       W     0    0    0       C        0   1   1   1   1   2   2   2   2   3   3   4   4   4   5   6   6   7   7   8  
 LCS     231       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     232       T     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     233       R     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     234       W     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     235       Y     3    3    3       E        1   1   1   1   2   2   2   2   2   2   3   3   4   4   6   7   8   8   8   9  
 LCS     236       S     3    3    3       C        1   1   1   1   1   1   2   2   2   2   2   3   4   5   6   7   8   8   8   9  
 LCS     237       M     3    3    3       C        1   1   1   1   2   2   2   2   3   3   4   4   5   5   6   7   8   8   8   9  
 LCS     238       K     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     239       K     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     240       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     241       T     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     242       M     0    0    0       E        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     243       K     0    0    0       E        0   0   0   1   1   1   1   1   2   2   3   3   3   3   3   3   4   4   4   4  
 LCS     244       I     0    0    0       E        0   0   0   1   1   1   1   1   1   2   3   3   3   3   3   3   4   4   4   4  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   0.17 
 
 NUMBER_OF_CA_Tg:  249      NUMBER_OF_CA_Pr:   43      PERCENT_OF_CA:  17.27  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max       5       5       6       6       6       7       8       8       8       9      10      11      13      14      17      19      20      21      22      23  
 GDT PERCENT_OF_CA_Pr   11.63   11.63   13.95   13.95   13.95   16.28   18.60   18.60   18.60   20.93   23.26   25.58   30.23   32.56   39.53   44.19   46.51   48.84   51.16   53.49 
 GDT PERCENT_OF_CA_Tg    2.01    2.01    2.41    2.41    2.41    2.81    3.21    3.21    3.21    3.61    4.02    4.42    5.22    5.62    6.83    7.63    8.03    8.43    8.84    9.24 
 GDT FRAGMENT: Beg-End 183-187 183-187 183-199 183-199 183-199 183-199 182-199 182-199 182-199   4-202   3-202   3-237   2-237   2-237   2-237   2-237   2-237   2-237   2-237   3-237 
 GDT RMS_LOCAL           0.21    0.21    1.02    1.02    1.02    1.91    2.29    2.29    2.29    3.07    3.55    3.87    4.54    5.03    5.81    6.08    6.20    6.36    6.60    7.69 
 GDT RMS_ALL_CA         34.57   34.57   32.93   32.93   32.93   35.37   36.69   36.69   36.69   14.44   14.62   14.37   14.50   14.34   14.24   14.04   14.02   14.01   14.02   13.32 
 
 
 TEST (CA)  RMS =  12.30               (Number of atoms:   43) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .   12.30         43    17.3   249     CRMSCA  
     CRN = ALL/NP  . . . . .    0.2861                            CRMSCA  
     SECONDARY STRUCTURE . .   13.01         14    18.2    77     CRMSCA  
     SURFACE . . . . . . . .   13.60         19    15.1   126     CRMSCA  
     BURIED  . . . . . . . .   11.17         24    19.5   123     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .   12.48        213    17.5  1216     CRMSMC  
     SECONDARY STRUCTURE . .   13.19         70    18.4   381     CRMSMC  
     SURFACE . . . . . . . .   13.64         94    15.3   615     CRMSMC  
     BURIED  . . . . . . . .   11.48        119    19.8   601     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .   12.88         41     4.1  1000     CRMSSC  
     RELIABLE SIDE CHAINS  .   12.88         41     4.6   888     CRMSSC  
     SECONDARY STRUCTURE . .   13.40         14     4.3   325     CRMSSC  
     SURFACE . . . . . . . .   14.56         18     3.6   498     CRMSSC  
     BURIED  . . . . . . . .   11.39         23     4.6   502     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .   12.48        213    10.7  1995     CRMSALL 
     SECONDARY STRUCTURE . .   13.19         70    11.1   633     CRMSALL 
     SURFACE . . . . . . . .   13.64         94     9.4  1002     CRMSALL 
     BURIED  . . . . . . . .   11.48        119    12.0   993     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.543      1.000       0.500     43    17.3   249     ERRCA  
     SECONDARY STRUCTURE . .   12.175      1.000       0.500     14    18.2    77     ERRCA  
     SURFACE . . . . . . . .   12.802      1.000       0.500     19    15.1   126     ERRCA  
     BURIED  . . . . . . . .   10.547      1.000       0.500     24    19.5   123     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.713      1.000       0.500    213    17.5  1216     ERRMC  
     SECONDARY STRUCTURE . .   12.286      1.000       0.500     70    18.4   381     ERRMC  
     SURFACE . . . . . . . .   12.793      1.000       0.500     94    15.3   615     ERRMC  
     BURIED  . . . . . . . .   10.860      1.000       0.500    119    19.8   601     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   12.005      1.000       0.500     41     4.1  1000     ERRSC  
     RELIABLE SIDE CHAINS  .   12.005      1.000       0.500     41     4.6   888     ERRSC  
     SECONDARY STRUCTURE . .   12.415      1.000       0.500     14     4.3   325     ERRSC  
     SURFACE . . . . . . . .   13.675      1.000       0.500     18     3.6   498     ERRSC  
     BURIED  . . . . . . . .   10.698      1.000       0.500     23     4.6   502     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .   11.713      1.000       0.500    213    10.7  1995     ERRALL 
     SECONDARY STRUCTURE . .   12.286      1.000       0.500     70    11.1   633     ERRALL 
     SURFACE . . . . . . . .   12.793      1.000       0.500     94     9.4  1002     ERRALL 
     BURIED  . . . . . . . .   10.860      1.000       0.500    119    12.0   993     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         0         0         0         1        18      43     249   DISTCA 
CA  (P)      0.00      0.00      0.00      0.40      7.23             249   DISTCA 
CA  (RMS)    0.00      0.00      0.00      3.77      7.79                   DISTCA 
 
ALL (N)         0         0         0         5        81     213    1995   DISTALL 
ALL (P)      0.00      0.00      0.00      0.25      4.06            1995   DISTALL 
ALL (RMS)    0.00      0.00      0.00      4.36      7.69                   DISTALL 
 
 
 
 
END of the results output 
