 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 154 , MODEL 154 , TARGET 154 
#          The number of residues possible to evaluate: 154 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     1     M     C     C             1.00 
 SSP     2     W     C     C             1.00 
 SSP     3     F     C     C             1.00 
 SSP     4     F     C     C             1.00 
 SSP     5     N     C     C             1.00 
 SSP     6     K     C     C             1.00 
 SSP     7     N     C     C             1.00 
 SSP     8     L     E     C             1.00 
 SSP     9     K     E     C             1.00 
 SSP    10     V     E     C             1.00 
 SSP    11     L     E     E             1.00 
 SSP    12     A     C     C             1.00 
 SSP    13     P     C     C             1.00 
 SSP    14     C     C     C             1.00 
 SSP    15     D     C     C             1.00 
 SSP    16     G     E     E             1.00 
 SSP    17     T     E     E             1.00 
 SSP    18     I     E     E             1.00 
 SSP    19     I     E     E             1.00 
 SSP    20     T     C     E             1.00 
 SSP    21     L     H     H             1.00 
 SSP    22     D     H     H             1.00 
 SSP    23     E     H     H             1.00 
 SSP    24     V     C     C             1.00 
 SSP    25     E     C     C             1.00 
 SSP    26     D     C     C             1.00 
 SSP    27     E     H     H             1.00 
 SSP    28     V     H     H             1.00 
 SSP    29     F     H     H             1.00 
 SSP    30     K     H     H             1.00 
 SSP    31     E     C     C             1.00 
 SSP    32     R     C     C             1.00 
 SSP    33     M     C     C             1.00 
 SSP    34     L     C     C             1.00 
 SSP    35     G     C     C             1.00 
 SSP    36     D     E     E             1.00 
 SSP    37     G     E     E             1.00 
 SSP    38     F     E     E             1.00 
 SSP    39     A     E     E             1.00 
 SSP    40     I     E     E             1.00 
 SSP    41     N     E     E             1.00 
 SSP    42     P     E     E             1.00 
 SSP    43     K     C     C             1.00 
 SSP    44     S     C     C             1.00 
 SSP    45     N     C     C             1.00 
 SSP    46     D     E     E             1.00 
 SSP    47     F     E     E             1.00 
 SSP    48     H     E     E             1.00 
 SSP    49     A     C     C             1.00 
 SSP    50     P     C     C             1.00 
 SSP    51     V     C     C             1.00 
 SSP    52     S     C     C             1.00 
 SSP    53     G     E     E             1.00 
 SSP    54     K     E     E             1.00 
 SSP    55     L     E     E             1.00 
 SSP    56     V     E     E             1.00 
 SSP    57     T     E     E             1.00 
 SSP    58     A     C     E             1.00 
 SSP    59     F     C     C             1.00 
 SSP    60     P     C     C             1.00 
 SSP    61     T     C     C             1.00 
 SSP    62     K     C     C             1.00 
 SSP    63     H     C     C             1.00 
 SSP    64     A     E     E             1.00 
 SSP    65     F     E     E             1.00 
 SSP    66     G     E     E             1.00 
 SSP    67     I     E     E             1.00 
 SSP    68     Q     E     E             1.00 
 SSP    69     T     C     E             1.00 
 SSP    70     K     C     C             1.00 
 SSP    71     S     C     C             1.00 
 SSP    72     G     C     C             1.00 
 SSP    73     V     C     C             1.00 
 SSP    74     E     E     E             1.00 
 SSP    75     I     E     E             1.00 
 SSP    76     L     E     E             1.00 
 SSP    77     L     E     E             1.00 
 SSP    78     H     E     E             1.00 
 SSP    79     I     C     C             1.00 
 SSP    80     G     C     C             1.00 
 SSP    81     L     C     E             1.00 
 SSP    82     D     C     C             1.00 
 SSP    83     T     H     C             1.00 
 SSP    84     V     H     H             1.00 
 SSP    85     S     H     H             1.00 
 SSP    86     L     H     H             1.00 
 SSP    87     D     C     C             1.00 
 SSP    88     G     C     C             1.00 
 SSP    89     N     C     C             1.00 
 SSP    90     G     C     C             1.00 
 SSP    91     F     E     E             1.00 
 SSP    92     E     E     E             1.00 
 SSP    93     S     E     E             1.00 
 SSP    94     F     C     C             1.00 
 SSP    95     V     C     C             1.00 
 SSP    96     T     C     C             1.00 
 SSP    97     Q     C     C             1.00 
 SSP    98     D     C     C             1.00 
 SSP    99     Q     C     C             1.00 
 SSP   100     E     E     E             1.00 
 SSP   101     V     E     E             1.00 
 SSP   102     N     C     C             1.00 
 SSP   103     A     C     C             1.00 
 SSP   104     G     C     C             1.00 
 SSP   105     D     C     C             1.00 
 SSP   106     K     E     E             1.00 
 SSP   107     L     E     E             1.00 
 SSP   108     V     E     E             1.00 
 SSP   109     T     E     E             1.00 
 SSP   110     V     E     E             1.00 
 SSP   111     D     C     C             1.00 
 SSP   112     L     H     H             1.00 
 SSP   113     K     H     H             1.00 
 SSP   114     S     H     H             1.00 
 SSP   115     V     H     H             1.00 
 SSP   116     A     H     H             1.00 
 SSP   117     K     H     C             1.00 
 SSP   118     K     H     C             1.00 
 SSP   119     V     C     C             1.00 
 SSP   120     P     C     C             1.00 
 SSP   121     S     C     E             1.00 
 SSP   122     I     C     C             1.00 
 SSP   123     K     C     C             1.00 
 SSP   124     S     E     E             1.00 
 SSP   125     P     E     E             1.00 
 SSP   126     I     E     E             1.00 
 SSP   127     I     E     E             1.00 
 SSP   128     F     E     E             1.00 
 SSP   129     T     E     C             1.00 
 SSP   130     N     E     C             1.00 
 SSP   131     N     C     C             1.00 
 SSP   132     G     C     C             1.00 
 SSP   133     G     C     C             1.00 
 SSP   134     K     C     C             1.00 
 SSP   135     T     C     C             1.00 
 SSP   136     L     C     E             1.00 
 SSP   137     E     C     E             1.00 
 SSP   138     I     C     E             1.00 
 SSP   139     V     E     C             1.00 
 SSP   140     K     C     C             1.00 
 SSP   141     M     C     C             1.00 
 SSP   142     G     E     C             1.00 
 SSP   143     E     E     E             1.00 
 SSP   144     V     E     E             1.00 
 SSP   145     K     C     C             1.00 
 SSP   146     Q     C     C             1.00 
 SSP   147     G     C     E             1.00 
 SSP   148     D     C     C             1.00 
 SSP   149     V     E     C             1.00 
 SSP   150     V     E     E             1.00 
 SSP   151     A     E     E             1.00 
 SSP   152     I     E     E             1.00 
 SSP   153     L     E     C             1.00 
 SSP   154     K     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              86.4      83.3     84.7     88.3    100.0 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        88.3     100.0     91.5     83.8    100.0 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           17              94.1               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     154    100.0     86.4 
 
 BIN  0.00 - 1.00      1.00     154    100.0     86.4 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         154             154           154            154 
 ALL CONTACTS (< 8.0A)     753             790           753            790 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       753        678   90.04   85.82   85.82       0     0.00         790       790  |   1-9999 
 RES CONTACTS       333        317   95.20   93.79   93.79       0     0.00         338       338  |   1-4    
 RES CONTACTS        40         34   85.00   87.18   87.18       0     0.00          39        39  |   5-8    
 RES CONTACTS       380        327   86.05   79.18   79.18       0     0.00         413       413  |   9-9999 
 
 
 
# WARNING! TARGET 1162 atoms, MODEL 1176 atoms, 1162 common with TARGET 
           Number of atoms possible to evaluate: 1162 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    42.54           81.7   306   100.0   306     ARMSMC  
     SECONDARY STRUCTURE . .    29.39           88.1   126   100.0   126     ARMSMC  
     SURFACE . . . . . . . .    51.79           75.3   178   100.0   178     ARMSMC  
     BURIED  . . . . . . . .    24.42           90.6   128   100.0   128     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    74.46           56.2   130   100.0   130     ARMSSC1 
     RELIABLE SIDE CHAINS  .    74.24           54.9   113   100.0   113     ARMSSC1 
     SECONDARY STRUCTURE . .    74.66           55.6    54   100.0    54     ARMSSC1 
     SURFACE . . . . . . . .    78.73           48.7    78   100.0    78     ARMSSC1 
     BURIED  . . . . . . . .    67.55           67.3    52   100.0    52     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    67.59           44.7    94   100.0    94     ARMSSC2 
     RELIABLE SIDE CHAINS  .    55.57           47.1    70   100.0    70     ARMSSC2 
     SECONDARY STRUCTURE . .    70.69           46.2    39   100.0    39     ARMSSC2 
     SURFACE . . . . . . . .    67.92           41.7    60   100.0    60     ARMSSC2 
     BURIED  . . . . . . . .    67.00           50.0    34   100.0    34     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    88.23           31.2    32   100.0    32     ARMSSC3 
     RELIABLE SIDE CHAINS  .    87.13           28.6    28   100.0    28     ARMSSC3 
     SECONDARY STRUCTURE . .    84.79           20.0    10   100.0    10     ARMSSC3 
     SURFACE . . . . . . . .    88.23           31.2    32   100.0    32     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    87.16           23.5    17   100.0    17     ARMSSC4 
     RELIABLE SIDE CHAINS  .    87.16           23.5    17   100.0    17     ARMSSC4 
     SECONDARY STRUCTURE . .    72.84           33.3     6   100.0     6     ARMSSC4 
     SURFACE . . . . . . . .    87.16           23.5    17   100.0    17     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    1 - 154  154  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   154      1 - 154      2.40     2.40 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    1 - 154  154  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   149      6 - 154      1.94     2.43 
  LCS LOCAL_SCORE:             96.55 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    1 - 154  154  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   117     13 - 129      1.00     2.42 
  LCS LOCAL_SCORE:             60.90 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       1       M     3  134  154       C        1   1   1   2  29  40  48  60  92  96  98  98  98  98  99  99 100 100 100 100  
 LCS       2       W     3  135  154       C        1   1   1   2   3  73  85  89  93  95  98  98  98  98  99  99 100 100 100 100  
 LCS       3       F     3  135  154       C        1   1   1   5   8  31  44  66  86  89  91  94  95  98  99  99 100 100 100 100  
 LCS       4       F     4  144  154       C        1   2   2   2   3   4   5   6   7   9  87  92  94  96  98  99 100 100 100 100  
 LCS       5       N     4  148  154       C        1   2   2  16  21  37  65  75  87  89  92  94  96  98  99  99 100 100 100 100  
 LCS       6       K    51  149  154       C        9  21  50  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS       7       N    63  149  154       C        8  41  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS       8       L    63  149  154       E       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS       9       K    63  149  154       E        2  11  46  78  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      10       V    72  149  154       E        6  30  72  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      11       L    73  149  154       E       14  52  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      12       A    84  149  154       C        6  54  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      13       P   117  149  154       C       11  51  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      14       C   117  149  154       C       14  50  72  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      15       D   117  149  154       C       14  54  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      16       G   117  149  154       E       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      17       T   117  149  154       E       19  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      18       I   117  149  154       E       20  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      19       I   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      20       T   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      21       L   117  149  154       H       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      22       D   117  149  154       H       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      23       E   117  149  154       H       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      24       V   117  149  154       C       24  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      25       E   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      26       D   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      27       E   117  149  154       H       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      28       V   117  149  154       H       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      29       F   117  149  154       H       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      30       K   117  149  154       H       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      31       E   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      32       R   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      33       M   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      34       L   117  149  154       C        7  54  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      35       G   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      36       D   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      37       G   117  149  154       E       20  54  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      38       F   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      39       A   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      40       I   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      41       N   117  149  154       E       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      42       P   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      43       K   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      44       S   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      45       N   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      46       D   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      47       F   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      48       H   117  149  154       E       22  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      49       A   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      50       P   117  149  154       C       19  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      51       V   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      52       S   117  149  154       C       12  40  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      53       G   117  149  154       E       21  54  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      54       K   117  149  154       E       21  54  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      55       L   117  149  154       E       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      56       V   117  149  154       E       20  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      57       T   117  149  154       E        1  18  70  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      58       A   117  149  154       C       17  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      59       F   117  149  154       C        8  33  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      60       P   117  149  154       C       10  46  73  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      61       T   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      62       K   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      63       H   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      64       A   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      65       F   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      66       G   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      67       I   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      68       Q   117  149  154       E       17  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      69       T   117  149  154       C        7  41  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      70       K   117  149  154       C        7  26  70  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      71       S   117  149  154       C        7  16  51  81  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      72       G   117  149  154       C        7  28  72  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      73       V   117  149  154       C        7  44  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      74       E   117  149  154       E       23  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      75       I   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      76       L   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      77       L   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      78       H   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      79       I   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      80       G   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      81       L   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      82       D   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      83       T   117  149  154       H       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      84       V   117  149  154       H       20  51  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      85       S   117  149  154       H       17  51  73  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      86       L   117  149  154       H       25  53  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      87       D   117  149  154       C       25  53  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      88       G   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      89       N   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      90       G   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      91       F   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      92       E   117  149  154       E       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      93       S   117  149  154       E       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      94       F   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      95       V   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      96       T   117  149  154       C       21  54  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      97       Q   117  149  154       C       21  50  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      98       D   117  149  154       C       16  48  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS      99       Q   117  149  154       C       21  52  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     100       E   117  149  154       E       21  52  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     101       V   117  149  154       E       21  54  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     102       N   117  149  154       C       21  54  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     103       A   117  149  154       C       14  39  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     104       G   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     105       D   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     106       K   117  149  154       E       24  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     107       L   117  149  154       E       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     108       V   117  149  154       E       18  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     109       T   117  149  154       E       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     110       V   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     111       D   117  149  154       C       15  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     112       L   117  149  154       H        9  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     113       K   117  149  154       H        9  48  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     114       S   117  149  154       H        7  50  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     115       V   117  149  154       H       20  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     116       A   117  149  154       H       11  51  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     117       K   117  149  154       H       14  53  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     118       K   117  149  154       H       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     119       V   117  149  154       C       21  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     120       P   117  149  154       C       16  51  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     121       S   117  149  154       C       18  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     122       I   117  149  154       C       18  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     123       K   117  149  154       C       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     124       S   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     125       P   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     126       I   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     127       I   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     128       F   117  149  154       E       25  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     129       T   117  149  154       E       16  55  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     130       N   116  149  154       E        2  37  72  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     131       N    27  149  154       C        1   2   7  27  72  85  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     132       G     5  149  154       C        1   7  37  55  74  85  88  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     133       G     5  149  154       C        1   2   5  33  43  52  79  90  93  96  98  98  98  98  99  99 100 100 100 100  
 LCS     134       K     5  149  154       C        1  19  62  81  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     135       T     5  149  154       C        1   3  39  64  82  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     136       L     5  149  154       C        1   2   9  71  83  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     137       E     5  149  154       C        1   2   3   5  12  37  77  85  93  96  98  98  98  98  99  99 100 100 100 100  
 LCS     138       I     5  149  154       C        1  10  14  22  42  67  81  89  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     139       V     7  149  154       E        1  12  44  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     140       K     7  149  154       C        9  41  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     141       M     7  149  154       C        2  23  68  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     142       G     7  149  154       E        7  42  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     143       E     7  149  154       E       12  46  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     144       V     7  149  154       E        2  53  74  82  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     145       K     7  149  154       C       14  50  71  81  85  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     146       Q     6  149  154       C        1   5  12  19  29  56  87  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     147       G     3  149  154       C        0   3   9  27  65  78  87  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     148       D     3  149  154       C        1   1   1  13  22  40  82  90  93  96  98  98  98  98  99  99 100 100 100 100  
 LCS     149       V     3  149  154       E        1   1  17  45  80  86  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     150       V     5  149  154       E        2   4  26  56  74  85  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     151       A     5  149  154       E        2   3  12  19  74  85  90  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     152       I     5  149  154       E        2  12  26  56  69  81  88  91  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS     153       L     5  149  154       E        2   3   3  12  25  39  83  90  93  96  98  98  98  98  99  99 100 100 100 100  
 LCS     154       K     5  149  154       C        1   3   7  33  66  79  87  90  94  96  98  98  98  98  99  99 100 100 100 100  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  60.90 
 
 NUMBER_OF_CA_Tg:  154      NUMBER_OF_CA_Pr:  154      PERCENT_OF_CA: 100.00  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      40      85     114     127     132     133     139     141     145     149     151     151     151     152     153     153     154     154     154     154  
 GDT PERCENT_OF_CA_Pr   25.97   55.19   74.03   82.47   85.71   86.36   90.26   91.56   94.16   96.75   98.05   98.05   98.05   98.70   99.35   99.35  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   25.97   55.19   74.03   82.47   85.71   86.36   90.26   91.56   94.16   96.75   98.05   98.05   98.05   98.70   99.35   99.35  100.00  100.00  100.00  100.00 
 GDT FRAGMENT: Beg-End  19-127   8-129   8-144   7-144   6-145   6-145   6-151   6-152   6-154   6-154   1-154   1-154   1-154   1-154   1-154   1-154   1-154   1-154   1-154   1-154 
 GDT RMS_LOCAL           0.34    0.69    0.89    1.04    1.13    1.15    1.39    1.50    1.70    1.94    2.03    2.03    2.03    2.19    2.26    2.26    2.40    2.40    2.40    2.40 
 GDT RMS_ALL_CA          2.50    2.42    2.41    2.43    2.44    2.44    2.41    2.41    2.41    2.43    2.43    2.43    2.43    2.40    2.40    2.40    2.40    2.40    2.40    2.40 
 
 
 TEST (CA)  RMS =   2.40               (Number of atoms:  154) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    2.40        154   100.0   154     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0156                            CRMSCA  
     SECONDARY STRUCTURE . .    1.55         63   100.0    63     CRMSCA  
     SURFACE . . . . . . . .    2.90         90   100.0    90     CRMSCA  
     BURIED  . . . . . . . .    1.42         64   100.0    64     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    2.45        756   100.0   756     CRMSMC  
     SECONDARY STRUCTURE . .    1.68        310   100.0   310     CRMSMC  
     SURFACE . . . . . . . .    2.92        442   100.0   442     CRMSMC  
     BURIED  . . . . . . . .    1.54        314   100.0   314     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    3.91        546   100.0   546     CRMSSC  
     RELIABLE SIDE CHAINS  .    3.97        450   100.0   450     CRMSSC  
     SECONDARY STRUCTURE . .    2.79        229   100.0   229     CRMSSC  
     SURFACE . . . . . . . .    4.62        333   100.0   333     CRMSSC  
     BURIED  . . . . . . . .    2.42        213   100.0   213     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    3.18       1162   100.0  1162     CRMSALL 
     SECONDARY STRUCTURE . .    2.23        481   100.0   481     CRMSALL 
     SURFACE . . . . . . . .    3.80        693   100.0   693     CRMSALL 
     BURIED  . . . . . . . .    1.96        469   100.0   469     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.996      0.635       0.671    154   100.0   154     ERRCA  
     SECONDARY STRUCTURE . .    5.624      0.665       0.701     63   100.0    63     ERRCA  
     SURFACE . . . . . . . .    6.924      0.604       0.639     90   100.0    90     ERRCA  
     BURIED  . . . . . . . .    4.691      0.677       0.717     64   100.0    64     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.037      0.633       0.670    756   100.0   756     ERRMC  
     SECONDARY STRUCTURE . .    5.630      0.657       0.693    310   100.0   310     ERRMC  
     SURFACE . . . . . . . .    6.994      0.607       0.643    442   100.0   442     ERRMC  
     BURIED  . . . . . . . .    4.690      0.668       0.708    314   100.0   314     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.852      0.532       0.568    546   100.0   546     ERRSC  
     RELIABLE SIDE CHAINS  .    6.067      0.549       0.581    450   100.0   450     ERRSC  
     SECONDARY STRUCTURE . .    5.302      0.530       0.567    229   100.0   229     ERRSC  
     SURFACE . . . . . . . .    6.934      0.515       0.545    333   100.0   333     ERRSC  
     BURIED  . . . . . . . .    4.160      0.559       0.603    213   100.0   213     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.931      0.587       0.623   1162   100.0  1162     ERRALL 
     SECONDARY STRUCTURE . .    5.466      0.599       0.636    481   100.0   481     ERRALL 
     SURFACE . . . . . . . .    6.941      0.565       0.598    693   100.0   693     ERRALL 
     BURIED  . . . . . . . .    4.439      0.620       0.661    469   100.0   469     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        77       123       129       143       153     154     154   DISTCA 
CA  (P)     50.00     79.87     83.77     92.86     99.35             154   DISTCA 
CA  (RMS)    0.67      1.00      1.10      1.60      2.26                   DISTCA 
 
ALL (N)       449       797       917      1043      1139    1162    1162   DISTALL 
ALL (P)     38.64     68.59     78.92     89.76     98.02            1162   DISTALL 
ALL (RMS)    0.67      1.06      1.33      1.84      2.66                   DISTALL 
 
 
 
 
END of the results output 
