 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 148 , MODEL 148 , TARGET 154 
#          The number of residues possible to evaluate: 148 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     7     N     C     C             1.00 
 SSP     8     L     E     E             1.00 
 SSP     9     K     E     E             1.00 
 SSP    10     V     E     E             1.00 
 SSP    11     L     E     E             1.00 
 SSP    12     A     C     C             1.00 
 SSP    13     P     C     C             1.00 
 SSP    14     C     C     C             1.00 
 SSP    15     D     C     C             1.00 
 SSP    16     G     E     E             1.00 
 SSP    17     T     E     E             1.00 
 SSP    18     I     E     E             1.00 
 SSP    19     I     E     E             1.00 
 SSP    20     T     C     E             1.00 
 SSP    21     L     H     H             1.00 
 SSP    22     D     H     H             1.00 
 SSP    23     E     H     H             1.00 
 SSP    24     V     C     C             1.00 
 SSP    25     E     C     C             1.00 
 SSP    26     D     C     C             1.00 
 SSP    27     E     H     H             1.00 
 SSP    28     V     H     H             1.00 
 SSP    29     F     H     H             1.00 
 SSP    30     K     H     H             1.00 
 SSP    31     E     C     C             1.00 
 SSP    32     R     C     C             1.00 
 SSP    33     M     C     C             1.00 
 SSP    34     L     C     C             1.00 
 SSP    35     G     C     C             1.00 
 SSP    36     D     E     E             1.00 
 SSP    37     G     E     E             1.00 
 SSP    38     F     E     E             1.00 
 SSP    39     A     E     E             1.00 
 SSP    40     I     E     E             1.00 
 SSP    41     N     E     E             1.00 
 SSP    42     P     E     E             1.00 
 SSP    43     K     C     C             1.00 
 SSP    44     S     C     C             1.00 
 SSP    45     N     C     C             1.00 
 SSP    46     D     E     E             1.00 
 SSP    47     F     E     E             1.00 
 SSP    48     H     E     E             1.00 
 SSP    49     A     C     C             1.00 
 SSP    50     P     C     C             1.00 
 SSP    51     V     C     C             1.00 
 SSP    52     S     C     C             1.00 
 SSP    53     G     E     E             1.00 
 SSP    54     K     E     E             1.00 
 SSP    55     L     E     E             1.00 
 SSP    56     V     E     E             1.00 
 SSP    57     T     E     E             1.00 
 SSP    58     A     C     E             1.00 
 SSP    59     F     C     C             1.00 
 SSP    60     P     C     C             1.00 
 SSP    61     T     C     C             1.00 
 SSP    62     K     C     C             1.00 
 SSP    63     H     C     C             1.00 
 SSP    64     A     E     E             1.00 
 SSP    65     F     E     E             1.00 
 SSP    66     G     E     E             1.00 
 SSP    67     I     E     E             1.00 
 SSP    68     Q     E     E             1.00 
 SSP    69     T     C     E             1.00 
 SSP    70     K     C     C             1.00 
 SSP    71     S     C     C             1.00 
 SSP    72     G     C     C             1.00 
 SSP    73     V     C     C             1.00 
 SSP    74     E     E     E             1.00 
 SSP    75     I     E     E             1.00 
 SSP    76     L     E     E             1.00 
 SSP    77     L     E     E             1.00 
 SSP    78     H     E     E             1.00 
 SSP    79     I     C     C             1.00 
 SSP    80     G     C     C             1.00 
 SSP    81     L     C     E             1.00 
 SSP    82     D     C     C             1.00 
 SSP    83     T     H     C             1.00 
 SSP    84     V     H     H             1.00 
 SSP    85     S     H     H             1.00 
 SSP    86     L     H     H             1.00 
 SSP    87     D     C     C             1.00 
 SSP    88     G     C     C             1.00 
 SSP    89     N     C     C             1.00 
 SSP    90     G     C     C             1.00 
 SSP    91     F     E     E             1.00 
 SSP    92     E     E     E             1.00 
 SSP    93     S     E     E             1.00 
 SSP    94     F     C     C             1.00 
 SSP    95     V     C     C             1.00 
 SSP    96     T     C     C             1.00 
 SSP    97     Q     C     C             1.00 
 SSP    98     D     C     C             1.00 
 SSP    99     Q     C     C             1.00 
 SSP   100     E     E     E             1.00 
 SSP   101     V     E     E             1.00 
 SSP   102     N     C     C             1.00 
 SSP   103     A     C     C             1.00 
 SSP   104     G     C     C             1.00 
 SSP   105     D     C     C             1.00 
 SSP   106     K     E     E             1.00 
 SSP   107     L     E     E             1.00 
 SSP   108     V     E     E             1.00 
 SSP   109     T     E     E             1.00 
 SSP   110     V     E     E             1.00 
 SSP   111     D     C     C             1.00 
 SSP   112     L     H     H             1.00 
 SSP   113     K     H     H             1.00 
 SSP   114     S     H     H             1.00 
 SSP   115     V     H     H             1.00 
 SSP   116     A     H     H             1.00 
 SSP   117     K     H     C             1.00 
 SSP   118     K     H     C             1.00 
 SSP   119     V     C     C             1.00 
 SSP   120     P     C     C             1.00 
 SSP   121     S     C     E             1.00 
 SSP   122     I     C     C             1.00 
 SSP   123     K     C     C             1.00 
 SSP   124     S     E     E             1.00 
 SSP   125     P     E     E             1.00 
 SSP   126     I     E     E             1.00 
 SSP   127     I     E     E             1.00 
 SSP   128     F     E     E             1.00 
 SSP   129     T     E     C             1.00 
 SSP   130     N     E     C             1.00 
 SSP   131     N     C     C             1.00 
 SSP   132     G     C     C             1.00 
 SSP   133     G     C     C             1.00 
 SSP   134     K     C     C             1.00 
 SSP   135     T     C     E             1.00 
 SSP   136     L     C     E             1.00 
 SSP   137     E     C     E             1.00 
 SSP   138     I     C     E             1.00 
 SSP   139     V     E     C             1.00 
 SSP   140     K     C     C             1.00 
 SSP   141     M     C     C             1.00 
 SSP   142     G     E     C             1.00 
 SSP   143     E     E     C             1.00 
 SSP   144     V     E     C             1.00 
 SSP   145     K     C     C             1.00 
 SSP   146     Q     C     C             1.00 
 SSP   147     G     C     C             1.00 
 SSP   148     D     C     E             1.00 
 SSP   149     V     E     E             1.00 
 SSP   150     V     E     E             1.00 
 SSP   151     A     E     E             1.00 
 SSP   152     I     E     E             1.00 
 SSP   153     L     E     E             1.00 
 SSP   154     K     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              87.2      83.3     89.8     85.9     96.1 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        88.4     100.0     93.2     82.2     96.1 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           17              94.1               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     148    100.0     87.2 
 
 BIN  0.00 - 1.00      1.00     148    100.0     87.2 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         148             148           148            154 
 ALL CONTACTS (< 8.0A)     771             777           771            790 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       771        675   87.55   86.87   85.44       0     0.00         777       790  |   1-9999 
 RES CONTACTS       323        309   95.67   94.79   91.42       0     0.00         326       338  |   1-4    
 RES CONTACTS        36         30   83.33   76.92   76.92       0     0.00          39        39  |   5-8    
 RES CONTACTS       412        336   81.55   81.55   81.36       0     0.00         412       413  |   9-9999 
 
 
 
# WARNING! TARGET 1162 atoms, MODEL 1175 atoms, 1162 common with TARGET 
           Number of atoms possible to evaluate: 1110 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    37.42           81.0   294    96.1   306     ARMSMC  
     SECONDARY STRUCTURE . .    33.16           83.3   126   100.0   126     ARMSMC  
     SURFACE . . . . . . . .    45.50           74.7   166    93.3   178     ARMSMC  
     BURIED  . . . . . . . .    23.05           89.1   128   100.0   128     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    72.93           55.2   125    96.2   130     ARMSSC1 
     RELIABLE SIDE CHAINS  .    70.56           55.6   108    95.6   113     ARMSSC1 
     SECONDARY STRUCTURE . .    76.42           51.9    54   100.0    54     ARMSSC1 
     SURFACE . . . . . . . .    79.83           45.2    73    93.6    78     ARMSSC1 
     BURIED  . . . . . . . .    61.96           69.2    52   100.0    52     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    68.10           46.1    89    94.7    94     ARMSSC2 
     RELIABLE SIDE CHAINS  .    57.63           51.5    66    94.3    70     ARMSSC2 
     SECONDARY STRUCTURE . .    70.97           51.3    39   100.0    39     ARMSSC2 
     SURFACE . . . . . . . .    64.21           41.8    55    91.7    60     ARMSSC2 
     BURIED  . . . . . . . .    73.95           52.9    34   100.0    34     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    90.23           26.7    30    93.8    32     ARMSSC3 
     RELIABLE SIDE CHAINS  .    79.55           30.8    26    92.9    28     ARMSSC3 
     SECONDARY STRUCTURE . .    78.10           20.0    10   100.0    10     ARMSSC3 
     SURFACE . . . . . . . .    90.23           26.7    30    93.8    32     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    66.15           50.0    16    94.1    17     ARMSSC4 
     RELIABLE SIDE CHAINS  .    66.15           50.0    16    94.1    17     ARMSSC4 
     SECONDARY STRUCTURE . .    46.42           66.7     6   100.0     6     ARMSSC4 
     SURFACE . . . . . . . .    66.15           50.0    16    94.1    17     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    7 - 154  148  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   148      7 - 154      1.67     1.67 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    7 - 154  148  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   148      7 - 154      1.67     1.67 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    7 - 154  148  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   116     15 - 130      0.99     1.74 
  LCS LOCAL_SCORE:             64.57 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       7       N    64  148  148       C        4  48  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS       8       L    64  148  148       E        5  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS       9       K    64  148  148       E       22  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      10       V    64  148  148       E       26  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      11       L    64  148  148       E       16  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      12       A    69  148  148       C       18  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      13       P    69  148  148       C       13  49  69  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      14       C    82  148  148       C        5  37  66  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      15       D   116  148  148       C        5  38  69  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      16       G   116  148  148       E       24  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      17       T   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      18       I   116  148  148       E       26  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      19       I   116  148  148       E       26  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      20       T   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      21       L   116  148  148       H       19  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      22       D   116  148  148       H       12  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      23       E   116  148  148       H        7  51  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      24       V   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      25       E   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      26       D   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      27       E   116  148  148       H       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      28       V   116  148  148       H       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      29       F   116  148  148       H       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      30       K   116  148  148       H       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      31       E   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      32       R   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      33       M   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      34       L   116  148  148       C        5  51  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      35       G   116  148  148       C       23  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      36       D   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      37       G   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      38       F   116  148  148       E       25  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      39       A   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      40       I   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      41       N   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      42       P   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      43       K   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      44       S   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      45       N   116  148  148       C       12  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      46       D   116  148  148       E       17  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      47       F   116  148  148       E       16  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      48       H   116  148  148       E       21  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      49       A   116  148  148       C       10  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      50       P   116  148  148       C       10  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      51       V   116  148  148       C       13  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      52       S   116  148  148       C       10  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      53       G   116  148  148       E       13  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      54       K   116  148  148       E       12  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      55       L   116  148  148       E       16  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      56       V   116  148  148       E       25  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      57       T   116  148  148       E        2  39  73  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      58       A   116  148  148       C       22  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      59       F   116  148  148       C        9  26  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      60       P   116  148  148       C        9  43  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      61       T   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      62       K   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      63       H   116  148  148       C       24  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      64       A   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      65       F   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      66       G   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      67       I   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      68       Q   116  148  148       E       23  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      69       T   116  148  148       C        7  37  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      70       K   116  148  148       C        7  27  66  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      71       S   116  148  148       C        6  18  57  79  84  87  89  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      72       G   116  148  148       C        7  26  70  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      73       V   116  148  148       C        8  45  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      74       E   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      75       I   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      76       L   116  148  148       E       26  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      77       L   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      78       H   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      79       I   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      80       G   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      81       L   116  148  148       C       18  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      82       D   116  148  148       C       16  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      83       T   116  148  148       H       20  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      84       V   116  148  148       H       17  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      85       S   116  148  148       H       17  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      86       L   116  148  148       H       18  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      87       D   116  148  148       C       20  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      88       G   116  148  148       C       25  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      89       N   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      90       G   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      91       F   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      92       E   116  148  148       E       15  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      93       S   116  148  148       E       21  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      94       F   116  148  148       C       25  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      95       V   116  148  148       C       22  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      96       T   116  148  148       C       14  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      97       Q   116  148  148       C       13  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      98       D   116  148  148       C       13  42  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS      99       Q   116  148  148       C       13  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     100       E   116  148  148       E       13  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     101       V   116  148  148       E       13  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     102       N   116  148  148       C       13  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     103       A   116  148  148       C       13  28  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     104       G   116  148  148       C       13  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     105       D   116  148  148       C       18  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     106       K   116  148  148       E       26  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     107       L   116  148  148       E       24  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     108       V   116  148  148       E       22  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     109       T   116  148  148       E       24  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     110       V   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     111       D   116  148  148       C       19  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     112       L   116  148  148       H        9  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     113       K   116  148  148       H        8  48  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     114       S   116  148  148       H        5  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     115       V   116  148  148       H       21  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     116       A   116  148  148       H       12  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     117       K   116  148  148       H       15  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     118       K   116  148  148       H       18  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     119       V   116  148  148       C       18  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     120       P   116  148  148       C       17  53  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     121       S   116  148  148       C       16  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     122       I   116  148  148       C       17  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     123       K   116  148  148       C       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     124       S   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     125       P   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     126       I   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     127       I   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     128       F   116  148  148       E       27  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     129       T   116  148  148       E       24  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     130       N   116  148  148       E       12  51  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     131       N    27  148  148       C        1  23  45  57  77  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     132       G     7  148  148       C       12  39  61  79  84  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     133       G     4  148  148       C       15  44  68  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     134       K     5  148  148       C        1   3   9  27  59  85  88  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     135       T     5  148  148       C        5  19  70  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     136       L     5  148  148       C       15  55  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     137       E     6  148  148       C        1   3  13  48  83  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     138       I     6  148  148       C        1   3   3  19  35  83  89  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     139       V     6  148  148       E        9  30  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     140       K     6  148  148       C        1   9  24  51  78  86  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     141       M     6  148  148       C        1  30  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     142       G     6  148  148       E        7  43  74  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     143       E     6  148  148       E        1  11  62  81  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     144       V     6  148  148       E        1   9  53  79  85  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     145       K     6  148  148       C        1   8  42  70  84  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     146       Q     6  148  148       C        1   3  14  68  83  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     147       G     3  148  148       C        2   6  23  50  77  85  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     148       D     3  148  148       C        1   7  32  56  74  85  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     149       V     3  148  148       E        1   1   3   8  20  69  85  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     150       V     5  148  148       E        1   3  20  42  74  81  89  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     151       A     5  148  148       E        2   5  19  35  78  87  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     152       I     5  148  148       E        2   7  46  66  75  86  90  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     153       L     5  148  148       E        2   3   3   3   9  28  87  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS     154       K     5  148  148       C        2   3   7  15  71  77  88  93  96  96  96  96  96  96  96  96  96  96  96  96  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  59.63 
 
 NUMBER_OF_CA_Tg:  154      NUMBER_OF_CA_Pr:  148      PERCENT_OF_CA:  96.10  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      42      86     115     126     131     135     140     144     148     148     148     148     148     148     148     148     148     148     148     148  
 GDT PERCENT_OF_CA_Pr   28.38   58.11   77.70   85.14   88.51   91.22   94.59   97.30  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   27.27   55.84   74.68   81.82   85.06   87.66   90.91   93.51   96.10   96.10   96.10   96.10   96.10   96.10   96.10   96.10   96.10   96.10   96.10   96.10 
 GDT FRAGMENT: Beg-End  17-128   9-136   7-142   7-142   7-144   7-146   7-152   7-152   7-154   7-154   7-154   7-154   7-154   7-154   7-154   7-154   7-154   7-154   7-154   7-154 
 GDT RMS_LOCAL           0.32    0.63    0.88    1.00    1.09    1.19    1.38    1.51    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67 
 GDT RMS_ALL_CA          1.74    1.72    1.69    1.69    1.70    1.69    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67    1.67 
 
 
 TEST (CA)  RMS =   1.67               (Number of atoms:  148) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    1.67        148    96.1   154     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0113                            CRMSCA  
     SECONDARY STRUCTURE . .    1.44         63   100.0    63     CRMSCA  
     SURFACE . . . . . . . .    1.89         84    93.3    90     CRMSCA  
     BURIED  . . . . . . . .    1.31         64   100.0    64     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    1.78        726    96.0   756     CRMSMC  
     SECONDARY STRUCTURE . .    1.60        310   100.0   310     CRMSMC  
     SURFACE . . . . . . . .    2.00        412    93.2   442     CRMSMC  
     BURIED  . . . . . . . .    1.44        314   100.0   314     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    3.21        518    94.9   546     CRMSSC  
     RELIABLE SIDE CHAINS  .    3.25        424    94.2   450     CRMSSC  
     SECONDARY STRUCTURE . .    2.68        229   100.0   229     CRMSSC  
     SURFACE . . . . . . . .    3.72        305    91.6   333     CRMSSC  
     BURIED  . . . . . . . .    2.27        213   100.0   213     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    2.50       1110    95.5  1162     CRMSALL 
     SECONDARY STRUCTURE . .    2.14        481   100.0   481     CRMSALL 
     SURFACE . . . . . . . .    2.90        641    92.5   693     CRMSALL 
     BURIED  . . . . . . . .    1.83        469   100.0   469     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.625      0.254       0.198    148    96.1   154     ERRCA  
     SECONDARY STRUCTURE . .    0.563      0.255       0.223     63   100.0    63     ERRCA  
     SURFACE . . . . . . . .    0.719      0.257       0.185     84    93.3    90     ERRCA  
     BURIED  . . . . . . . .    0.503      0.250       0.216     64   100.0    64     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.680      0.261       0.198    726    96.0   756     ERRMC  
     SECONDARY STRUCTURE . .    0.620      0.261       0.222    310   100.0   310     ERRMC  
     SURFACE . . . . . . . .    0.773      0.261       0.185    412    93.2   442     ERRMC  
     BURIED  . . . . . . . .    0.557      0.259       0.215    314   100.0   314     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.422      0.329       0.198    518    94.9   546     ERRSC  
     RELIABLE SIDE CHAINS  .    1.416      0.326       0.197    424    94.2   450     ERRSC  
     SECONDARY STRUCTURE . .    1.163      0.301       0.183    229   100.0   229     ERRSC  
     SURFACE . . . . . . . .    1.766      0.359       0.204    305    91.6   333     ERRSC  
     BURIED  . . . . . . . .    0.931      0.286       0.189    213   100.0   213     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.004      0.291       0.200   1110    95.5  1162     ERRALL 
     SECONDARY STRUCTURE . .    0.864      0.282       0.208    481   100.0   481     ERRALL 
     SURFACE . . . . . . . .    1.216      0.305       0.195    641    92.5   693     ERRALL 
     BURIED  . . . . . . . .    0.714      0.272       0.207    469   100.0   469     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        75       123       134       148       148     148     154   DISTCA 
CA  (P)     48.70     79.87     87.01     96.10     96.10             154   DISTCA 
CA  (RMS)    0.61      0.99      1.20      1.67      1.67                   DISTCA 
 
ALL (N)       441       805       939      1053      1101    1110    1162   DISTALL 
ALL (P)     37.95     69.28     80.81     90.62     94.75            1162   DISTALL 
ALL (RMS)    0.63      1.07      1.35      1.79      2.27                   DISTALL 
 
 
 
 
END of the results output 
