 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 154 , MODEL 154 , TARGET 154 
#          The number of residues possible to evaluate: 154 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     1     M     C     C             1.00 
 SSP     2     W     C     C             1.00 
 SSP     3     F     C     C             1.00 
 SSP     4     F     C     C             1.00 
 SSP     5     N     C     C             1.00 
 SSP     6     K     C     C             1.00 
 SSP     7     N     C     C             1.00 
 SSP     8     L     E     C             1.00 
 SSP     9     K     E     C             1.00 
 SSP    10     V     E     C             1.00 
 SSP    11     L     E     C             1.00 
 SSP    12     A     C     E             1.00 
 SSP    13     P     C     C             1.00 
 SSP    14     C     C     C             1.00 
 SSP    15     D     C     C             1.00 
 SSP    16     G     E     E             1.00 
 SSP    17     T     E     E             1.00 
 SSP    18     I     E     E             1.00 
 SSP    19     I     E     E             1.00 
 SSP    20     T     C     C             1.00 
 SSP    21     L     H     C             1.00 
 SSP    22     D     H     C             1.00 
 SSP    23     E     H     C             1.00 
 SSP    24     V     C     C             1.00 
 SSP    25     E     C     C             1.00 
 SSP    26     D     C     C             1.00 
 SSP    27     E     H     H             1.00 
 SSP    28     V     H     H             1.00 
 SSP    29     F     H     H             1.00 
 SSP    30     K     H     H             1.00 
 SSP    31     E     C     C             1.00 
 SSP    32     R     C     C             1.00 
 SSP    33     M     C     C             1.00 
 SSP    34     L     C     C             1.00 
 SSP    35     G     C     C             1.00 
 SSP    36     D     E     C             1.00 
 SSP    37     G     E     E             1.00 
 SSP    38     F     E     E             1.00 
 SSP    39     A     E     E             1.00 
 SSP    40     I     E     E             1.00 
 SSP    41     N     E     E             1.00 
 SSP    42     P     E     E             1.00 
 SSP    43     K     C     C             1.00 
 SSP    44     S     C     C             1.00 
 SSP    45     N     C     C             1.00 
 SSP    46     D     E     C             1.00 
 SSP    47     F     E     C             1.00 
 SSP    48     H     E     C             1.00 
 SSP    49     A     C     C             1.00 
 SSP    50     P     C     C             1.00 
 SSP    51     V     C     C             1.00 
 SSP    52     S     C     C             1.00 
 SSP    53     G     E     C             1.00 
 SSP    54     K     E     E             1.00 
 SSP    55     L     E     C             1.00 
 SSP    56     V     E     C             1.00 
 SSP    57     T     E     C             1.00 
 SSP    58     A     C     C             1.00 
 SSP    59     F     C     C             1.00 
 SSP    60     P     C     C             1.00 
 SSP    61     T     C     C             1.00 
 SSP    62     K     C     C             1.00 
 SSP    63     H     C     C             1.00 
 SSP    64     A     E     C             1.00 
 SSP    65     F     E     E             1.00 
 SSP    66     G     E     E             1.00 
 SSP    67     I     E     E             1.00 
 SSP    68     Q     E     E             1.00 
 SSP    69     T     C     C             1.00 
 SSP    70     K     C     C             1.00 
 SSP    71     S     C     C             1.00 
 SSP    72     G     C     C             1.00 
 SSP    73     V     C     C             1.00 
 SSP    74     E     E     E             1.00 
 SSP    75     I     E     E             1.00 
 SSP    76     L     E     E             1.00 
 SSP    77     L     E     E             1.00 
 SSP    78     H     E     C             1.00 
 SSP    79     I     C     C             1.00 
 SSP    80     G     C     C             1.00 
 SSP    81     L     C     C             1.00 
 SSP    82     D     C     C             1.00 
 SSP    83     T     H     C             1.00 
 SSP    84     V     H     H             1.00 
 SSP    85     S     H     H             1.00 
 SSP    86     L     H     H             1.00 
 SSP    87     D     C     C             1.00 
 SSP    88     G     C     C             1.00 
 SSP    89     N     C     C             1.00 
 SSP    90     G     C     C             1.00 
 SSP    91     F     E     E             1.00 
 SSP    92     E     E     E             1.00 
 SSP    93     S     E     E             1.00 
 SSP    94     F     C     E             1.00 
 SSP    95     V     C     C             1.00 
 SSP    96     T     C     C             1.00 
 SSP    97     Q     C     C             1.00 
 SSP    98     D     C     C             1.00 
 SSP    99     Q     C     C             1.00 
 SSP   100     E     E     E             1.00 
 SSP   101     V     E     C             1.00 
 SSP   102     N     C     C             1.00 
 SSP   103     A     C     C             1.00 
 SSP   104     G     C     C             1.00 
 SSP   105     D     C     C             1.00 
 SSP   106     K     E     C             1.00 
 SSP   107     L     E     C             1.00 
 SSP   108     V     E     E             1.00 
 SSP   109     T     E     E             1.00 
 SSP   110     V     E     E             1.00 
 SSP   111     D     C     C             1.00 
 SSP   112     L     H     H             1.00 
 SSP   113     K     H     H             1.00 
 SSP   114     S     H     H             1.00 
 SSP   115     V     H     H             1.00 
 SSP   116     A     H     C             1.00 
 SSP   117     K     H     C             1.00 
 SSP   118     K     H     C             1.00 
 SSP   119     V     C     C             1.00 
 SSP   120     P     C     C             1.00 
 SSP   121     S     C     C             1.00 
 SSP   122     I     C     C             1.00 
 SSP   123     K     C     C             1.00 
 SSP   124     S     E     C             1.00 
 SSP   125     P     E     E             1.00 
 SSP   126     I     E     E             1.00 
 SSP   127     I     E     E             1.00 
 SSP   128     F     E     C             1.00 
 SSP   129     T     E     H             1.00 
 SSP   130     N     E     H             1.00 
 SSP   131     N     C     H             1.00 
 SSP   132     G     C     C             1.00 
 SSP   133     G     C     C             1.00 
 SSP   134     K     C     C             1.00 
 SSP   135     T     C     C             1.00 
 SSP   136     L     C     C             1.00 
 SSP   137     E     C     C             1.00 
 SSP   138     I     C     C             1.00 
 SSP   139     V     E     C             1.00 
 SSP   140     K     C     C             1.00 
 SSP   141     M     C     C             1.00 
 SSP   142     G     E     C             1.00 
 SSP   143     E     E     C             1.00 
 SSP   144     V     E     E             1.00 
 SSP   145     K     C     C             1.00 
 SSP   146     Q     C     E             1.00 
 SSP   147     G     C     C             1.00 
 SSP   148     D     C     C             1.00 
 SSP   149     V     E     C             1.00 
 SSP   150     V     E     C             1.00 
 SSP   151     A     E     C             1.00 
 SSP   152     I     E     C             1.00 
 SSP   153     L     E     C             1.00 
 SSP   154     K     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              74.0      61.1     50.8     94.8    100.0 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        71.0      77.8     59.3     78.0    100.0 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           17              56.5               2.4 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     154    100.0     74.0 
 
 BIN  0.00 - 1.00      1.00     154    100.0     74.0 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         154             154           154            154 
 ALL CONTACTS (< 8.0A)     771             790           771            790 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       771        594   77.04   75.19   75.19       0     0.00         790       790  |   1-9999 
 RES CONTACTS       336        296   88.10   87.57   87.57       0     0.00         338       338  |   1-4    
 RES CONTACTS        37         25   67.57   64.10   64.10       0     0.00          39        39  |   5-8    
 RES CONTACTS       398        273   68.59   66.10   66.10       0     0.00         413       413  |   9-9999 
 
 
 
# WARNING! TARGET 1162 atoms, MODEL 1425 atoms, 1162 common with TARGET 
           Number of atoms possible to evaluate: 1162 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    65.86           46.7   306   100.0   306     ARMSMC  
     SECONDARY STRUCTURE . .    57.15           46.0   126   100.0   126     ARMSMC  
     SURFACE . . . . . . . .    72.51           43.8   178   100.0   178     ARMSMC  
     BURIED  . . . . . . . .    55.30           50.8   128   100.0   128     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    87.80           26.9   130   100.0   130     ARMSSC1 
     RELIABLE SIDE CHAINS  .    87.45           25.7   113   100.0   113     ARMSSC1 
     SECONDARY STRUCTURE . .    85.65           27.8    54   100.0    54     ARMSSC1 
     SURFACE . . . . . . . .    87.55           24.4    78   100.0    78     ARMSSC1 
     BURIED  . . . . . . . .    88.18           30.8    52   100.0    52     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    77.16           26.6    94   100.0    94     ARMSSC2 
     RELIABLE SIDE CHAINS  .    72.35           30.0    70   100.0    70     ARMSSC2 
     SECONDARY STRUCTURE . .    79.73           28.2    39   100.0    39     ARMSSC2 
     SURFACE . . . . . . . .    71.47           30.0    60   100.0    60     ARMSSC2 
     BURIED  . . . . . . . .    86.28           20.6    34   100.0    34     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .   102.05           21.9    32   100.0    32     ARMSSC3 
     RELIABLE SIDE CHAINS  .    99.32           21.4    28   100.0    28     ARMSSC3 
     SECONDARY STRUCTURE . .    99.54           30.0    10   100.0    10     ARMSSC3 
     SURFACE . . . . . . . .   102.05           21.9    32   100.0    32     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .   101.98           23.5    17   100.0    17     ARMSSC4 
     RELIABLE SIDE CHAINS  .   101.98           23.5    17   100.0    17     ARMSSC4 
     SECONDARY STRUCTURE . .   107.53           33.3     6   100.0     6     ARMSSC4 
     SURFACE . . . . . . . .   101.98           23.5    17   100.0    17     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     0     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    1 - 154  154  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   154      1 - 154      3.03     3.03 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    1 - 154  154  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   127      5 - 131      1.94     3.06 
  LCS LOCAL_SCORE:             69.49 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    1 - 154  154  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    20     37 - 56       0.99     3.10 
  LCS LOCAL_SCORE:              7.48 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       1       M     3    3  154       C        0   1   1   3  11  46  66  81  89  92  95  96  96  97  97  98  98  98  99  99  
 LCS       2       W     4    5  154       C        0   2   2   3   3   3   7  40  58  76  92  95  96  97  97  98  98  98  99  99  
 LCS       3       F     4    5  154       C        1   2   2   3   3   3   3   3   4   6   7  11  12  18  20  61  94  98  99  99  
 LCS       4       F     4    5  154       C        1   2   2   3   3   3   3   3   4   4   5  11  11  18  20  22  28  98  99  99  
 LCS       5       N     4  127  154       C        1   2   2   3  24  40  70  83  89  93  95  96  96  97  97  98  98  98  99  99  
 LCS       6       K     4  127  154       C        1   3   7  27  44  61  70  82  88  93  95  96  96  97  97  98  98  98  99  99  
 LCS       7       N     4  127  154       C        1   8  27  55  73  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS       8       L     4  127  154       E        2  14  46  63  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS       9       K     6  127  154       E        5  12  29  48  69  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      10       V    10  127  154       E        2  13  36  62  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      11       L    12  127  154       E        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      12       A    12  127  154       C        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      13       P    12  127  154       C        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      14       C    18  127  154       C        5  20  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      15       D    18  127  154       C        5  16  42  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      16       G    18  127  154       E        4  16  40  64  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      17       T    18  127  154       E        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      18       I    18  127  154       E        4  22  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      19       I    18  127  154       E        3  18  46  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      20       T    18  127  154       C        3  11  38  61  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      21       L    18  127  154       H        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      22       D    18  127  154       H        5  21  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      23       E    18  127  154       H        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      24       V    18  127  154       C        4  23  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      25       E    18  127  154       C        6  23  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      26       D    18  127  154       C        6  22  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      27       E    18  127  154       H        6  17  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      28       V    18  127  154       H        6  16  36  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      29       F    18  127  154       H        6  16  46  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      30       K    18  127  154       H        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      31       E    18  127  154       C        5  20  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      32       R    14  127  154       C        1  12  33  63  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      33       M    13  127  154       C        6  24  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      34       L     5  127  154       C        1   5  19  40  72  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      35       G     5  127  154       C        1   7  27  62  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      36       D     3  127  154       E        2   4  25  55  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      37       G    20  127  154       E        4  21  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      38       F    20  127  154       E        4  21  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      39       A    20  127  154       E        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      40       I    20  127  154       E        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      41       N    20  127  154       E        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      42       P    20  127  154       E        8  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      43       K    20  127  154       C        5  25  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      44       S    20  127  154       C        5  22  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      45       N    20  127  154       C        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      46       D    20  127  154       E        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      47       F    20  127  154       E        4  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      48       H    20  127  154       E        4  20  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      49       A    20  127  154       C        3  22  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      50       P    20  127  154       C        4  23  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      51       V    20  127  154       C        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      52       S    20  127  154       C        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      53       G    20  127  154       E        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      54       K    20  127  154       E        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      55       L    20  127  154       E        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      56       V    20  127  154       E        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      57       T    19  127  154       E        3  18  42  62  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      58       A    14  127  154       C        3   9  44  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      59       F     5  127  154       C        1  11  39  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      60       P     5  127  154       C        3  18  42  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      61       T     5  127  154       C        5  23  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      62       K     5  127  154       C        1   9  26  51  67  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      63       H     4  127  154       C        1   9  39  61  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      64       A     4  127  154       E        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      65       F     4  127  154       E        2   2  16  40  50  72  83  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      66       G     6  127  154       E        5  19  40  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      67       I     6  127  154       E        3  16  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      68       Q     6  127  154       E        2  13  45  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      69       T     6  127  154       C        2   4  18  51  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      70       K     6  127  154       C        2   4  18  48  71  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      71       S     6  127  154       C        3  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      72       G     4  127  154       C        1   5  15  45  66  79  85  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      73       V    14  127  154       C        3  16  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      74       E    14  127  154       E        5  22  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      75       I    14  127  154       E        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      76       L    14  127  154       E        4  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      77       L    16  127  154       E        5  20  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      78       H    16  127  154       E        7  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      79       I    16  127  154       C        5  24  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      80       G    16  127  154       C        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      81       L    16  127  154       C        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      82       D    16  127  154       C        3   9  40  62  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      83       T    16  127  154       H        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      84       V    16  127  154       H        5  23  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      85       S    16  127  154       H        5  23  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      86       L    16  127  154       H        5  22  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      87       D    16  127  154       C        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      88       G    16  127  154       C        2   3  16  45  72  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      89       N    16  127  154       C        5  20  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      90       G    16  127  154       C        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      91       F    16  127  154       E        4  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      92       E    16  127  154       E        7  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      93       S     5  127  154       E        1  14  34  61  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      94       F     9  127  154       C        1  16  38  62  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      95       V    13  127  154       C        4  22  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      96       T    13  127  154       C        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      97       Q    13  127  154       C        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      98       D    13  127  154       C        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS      99       Q    13  127  154       C        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     100       E    13  127  154       E        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     101       V    13  127  154       E        8  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     102       N    13  127  154       C        4  25  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     103       A    13  127  154       C        2  12  25  57  72  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     104       G    13  127  154       C        1  12  24  61  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     105       D    13  127  154       C        2  15  46  64  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     106       K    13  127  154       E        3  12  42  63  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     107       L    13  127  154       E        3  16  46  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     108       V    11  127  154       E        3  16  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     109       T    11  127  154       E        3  14  40  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     110       V    11  127  154       E        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     111       D    11  127  154       C        5  20  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     112       L    11  127  154       H        4  12  41  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     113       K    11  127  154       H        5  12  40  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     114       S    11  127  154       H        5  15  45  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     115       V    11  127  154       H        5  18  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     116       A    11  127  154       H        5  17  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     117       K    11  127  154       H        1   7  19  44  68  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     118       K    11  127  154       H        3  12  41  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     119       V     9  127  154       C        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     120       P     9  127  154       C        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     121       S     9  127  154       C        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     122       I     9  127  154       C        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     123       K     9  127  154       C        6  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     124       S     9  127  154       E        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     125       P     9  127  154       E        9  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     126       I     9  127  154       E        5  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     127       I     5  127  154       E        1   3  10  29  66  79  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     128       F     5  127  154       E        3  21  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     129       T     5  127  154       E        2  19  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     130       N     5  127  154       E        2  13  42  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     131       N     5  127  154       C        1   3   9  34  61  75  83  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     132       G     4  126  154       C        1   1   3   6   9  14  18  42  72  85  93  95  96  96  97  98  98  98  99  99  
 LCS     133       G     4    8  154       C        1   1   3   6   7   9  17  31  37  68  79  90  94  96  96  98  98  98  98  99  
 LCS     134       K     4    8  154       C        1   1   3  29  55  74  82  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     135       T     4    7  154       C        1  14  39  63  73  79  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     136       L     4    7  154       C        1   2   2   3  11  30  72  87  91  92  94  96  96  97  97  98  98  98  99  99  
 LCS     137       E     5    7  154       C        1  10  28  51  71  79  84  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     138       I     5    7  154       C        3  22  46  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     139       V     5    7  154       E        2   4  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     140       K     5   11  154       C        2   4  19  60  72  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     141       M     5   11  154       C        2   7  19  35  62  77  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     142       G     6   11  154       E        2  11  23  47  67  76  82  87  91  92  95  96  96  97  97  98  98  98  99  99  
 LCS     143       E     6   11  154       E        4  15  29  52  70  79  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     144       V     6   11  154       E        2  14  29  52  72  79  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     145       K     6   11  154       C        4  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     146       Q     6   11  154       C        8  27  48  65  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     147       G     6   11  154       C        3  18  42  61  74  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     148       D     5   11  154       C        2   5  12  34  55  77  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     149       V     4   11  154       E        2  11  26  48  72  80  86  88  91  93  95  96  96  97  97  98  98  98  99  99  
 LCS     150       V     4   11  154       E        2   3   8  18  44  63  78  87  90  92  95  96  96  97  97  98  98  98  99  99  
 LCS     151       A     4   11  154       E        2   9  20  27  49  73  84  87  90  93  95  96  96  97  97  98  98  98  99  99  
 LCS     152       I     4    8  154       E        1   3   7  21  44  61  77  83  90  93  95  96  96  97  97  98  98  98  99  99  
 LCS     153       L     3    8  154       E        1   1   5  11  20  38  77  83  85  92  94  96  96  97  97  98  98  98  99  99  
 LCS     154       K     3    8  154       C        0   4   5  19  42  68  77  86  90  93  95  96  96  97  97  98  98  98  99  99  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   7.48 
 
 NUMBER_OF_CA_Tg:  154      NUMBER_OF_CA_Pr:  154      PERCENT_OF_CA: 100.00  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      14      43      75     101     114     124     133     137     141     144     147     149     149     150     150     151     152     152     153     153  
 GDT PERCENT_OF_CA_Pr    9.09   27.92   48.70   65.58   74.03   80.52   86.36   88.96   91.56   93.51   95.45   96.75   96.75   97.40   97.40   98.05   98.70   98.70   99.35   99.35 
 GDT PERCENT_OF_CA_Tg    9.09   27.92   48.70   65.58   74.03   80.52   86.36   88.96   91.56   93.51   95.45   96.75   96.75   97.40   97.40   98.05   98.70   98.70   99.35   99.35 
 GDT FRAGMENT: Beg-End  53-125  12-146  11-146  11-146   8-147   7-149   7-149   7-149   7-149   5-154   1-154   1-154   1-154   1-154   1-154   1-154   1-154   1-154   1-154   1-154 
 GDT RMS_LOCAL           0.37    0.78    1.07    1.32    1.47    1.64    1.82    1.92    2.05    2.21    2.32    2.40    2.40    2.51    2.50    2.62    2.72    2.72    2.92    2.85 
 GDT RMS_ALL_CA          3.42    3.16    3.10    3.10    3.08    3.06    3.07    3.06    3.07    3.05    3.05    3.05    3.05    3.04    3.04    3.04    3.03    3.03    3.03    3.03 
 
 
 TEST (CA)  RMS =   3.03               (Number of atoms:  154) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    3.03        154   100.0   154     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0197                            CRMSCA  
     SECONDARY STRUCTURE . .    2.43         63   100.0    63     CRMSCA  
     SURFACE . . . . . . . .    3.52         90   100.0    90     CRMSCA  
     BURIED  . . . . . . . .    2.16         64   100.0    64     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    3.10        756   100.0   756     CRMSMC  
     SECONDARY STRUCTURE . .    2.52        310   100.0   310     CRMSMC  
     SURFACE . . . . . . . .    3.56        442   100.0   442     CRMSMC  
     BURIED  . . . . . . . .    2.30        314   100.0   314     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    5.17        546   100.0   546     CRMSSC  
     RELIABLE SIDE CHAINS  .    5.35        450   100.0   450     CRMSSC  
     SECONDARY STRUCTURE . .    4.29        229   100.0   229     CRMSSC  
     SURFACE . . . . . . . .    5.84        333   100.0   333     CRMSSC  
     BURIED  . . . . . . . .    3.89        213   100.0   213     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    4.15       1162   100.0  1162     CRMSALL 
     SECONDARY STRUCTURE . .    3.42        481   100.0   481     CRMSALL 
     SURFACE . . . . . . . .    4.75        693   100.0   693     CRMSALL 
     BURIED  . . . . . . . .    3.06        469   100.0   469     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.315      1.000       0.500    154   100.0   154     ERRCA  
     SECONDARY STRUCTURE . .    2.036      1.000       0.500     63   100.0    63     ERRCA  
     SURFACE . . . . . . . .    2.694      1.000       0.500     90   100.0    90     ERRCA  
     BURIED  . . . . . . . .    1.783      1.000       0.500     64   100.0    64     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.389      1.000       0.500    756   100.0   756     ERRMC  
     SECONDARY STRUCTURE . .    2.103      1.000       0.500    310   100.0   310     ERRMC  
     SURFACE . . . . . . . .    2.742      1.000       0.500    442   100.0   442     ERRMC  
     BURIED  . . . . . . . .    1.891      1.000       0.500    314   100.0   314     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.948      1.000       0.500    546   100.0   546     ERRSC  
     RELIABLE SIDE CHAINS  .    4.043      1.000       0.500    450   100.0   450     ERRSC  
     SECONDARY STRUCTURE . .    3.333      1.000       0.500    229   100.0   229     ERRSC  
     SURFACE . . . . . . . .    4.529      1.000       0.500    333   100.0   333     ERRSC  
     BURIED  . . . . . . . .    3.039      1.000       0.500    213   100.0   213     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.074      1.000       0.500   1162   100.0  1162     ERRALL 
     SECONDARY STRUCTURE . .    2.640      1.000       0.500    481   100.0   481     ERRALL 
     SURFACE . . . . . . . .    3.555      1.000       0.500    693   100.0   693     ERRALL 
     BURIED  . . . . . . . .    2.364      1.000       0.500    469   100.0   469     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        23        91       120       142       151     154     154   DISTCA 
CA  (P)     14.94     59.09     77.92     92.21     98.05             154   DISTCA 
CA  (RMS)    0.72      1.32      1.64      2.13      2.61                   DISTCA 
 
ALL (N)       139       553       780       976      1120    1162    1162   DISTALL 
ALL (P)     11.96     47.59     67.13     83.99     96.39            1162   DISTALL 
ALL (RMS)    0.72      1.38      1.76      2.34      3.34                   DISTALL 
 
 
 
 
END of the results output 
