 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 66 , MODEL 66 , TARGET 493 
#          The number of residues possible to evaluate: 66 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP   168     T     H     C             1.00 
 SSP   169     L     H     H             1.00 
 SSP   170     A     H     H             1.00 
 SSP   171     L     H     H             1.00 
 SSP   172     E     H     H             1.00 
 SSP   173     L     H     H             1.00 
 SSP   174     L     H     H             1.00 
 SSP   175     Q     H     H             1.00 
 SSP   176     Q     H     H             1.00 
 SSP   177     D     C     C             1.00 
 SSP   178     A     C     C             1.00 
 SSP   179     H     C     C             1.00 
 SSP   180     L     C     C             1.00 
 SSP   181     D     C     C             1.00 
 SSP   182     R     E     E             1.00 
 SSP   183     V     E     E             1.00 
 SSP   184     F     E     E             1.00 
 SSP   185     V     E     C             1.00 
 SSP   186     P     E     C             1.00 
 SSP   187     V     C     C             1.00 
 SSP   188     G     C     H             1.00 
 SSP   189     G     C     H             1.00 
 SSP   190     G     C     H             1.00 
 SSP   191     G     H     H             1.00 
 SSP   192     L     H     H             1.00 
 SSP   193     A     H     H             1.00 
 SSP   194     A     H     H             1.00 
 SSP  BREAK 
 SSP   196     V     H     H             1.00 
 SSP   197     A     H     H             1.00 
 SSP   198     V     H     H             1.00 
 SSP   199     L     H     H             1.00 
 SSP   200     I     H     H             1.00 
 SSP   201     K     H     H             1.00 
 SSP   202     Q     H     C             1.00 
 SSP   203     L     H     C             1.00 
 SSP   204     M     C     C             1.00 
 SSP   205     P     C     C             1.00 
 SSP   206     Q     C     C             1.00 
 SSP   207     I     C     C             1.00 
 SSP   208     K     E     E             1.00 
 SSP   209     V     E     E             1.00 
 SSP   210     I     E     E             1.00 
 SSP   211     A     E     E             1.00 
 SSP   212     V     E     E             1.00 
 SSP   213     E     E     E             1.00 
 SSP   214     A     E     C             1.00 
 SSP   215     E     C     C             1.00 
 SSP  BREAK 
 SSP   217     S     C     H             1.00 
 SSP   218     A     C     H             1.00 
 SSP   219     C     C     H             1.00 
 SSP   220     L     H     H             1.00 
 SSP   221     K     H     H             1.00 
 SSP   222     A     H     H             1.00 
 SSP   223     A     H     H             1.00 
 SSP   224     L     H     H             1.00 
 SSP   225     D     C     H             1.00 
 SSP   226     A     C     C             1.00 
 SSP   227     G     C     C             1.00 
 SSP   228     H     C     C             1.00 
 SSP   229     P     C     C             1.00 
 SSP   230     V     C     E             1.00 
 SSP   231     D     C     E             1.00 
 SSP   232     L     C     E             1.00 
 SSP   233     P     C     E             1.00 
 SSP   234     R     C     C             1.00 
 SSP   235     V     C     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              74.2      88.5     75.0     60.7     13.4 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        71.6      93.5     91.7     50.9     13.4 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG            5             100.0               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00      66    100.0     74.2 
 
 BIN  0.00 - 1.00      1.00      66    100.0     74.2 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED          60              60            60            489 
 ALL CONTACTS (< 8.0A)     240             211           240           2555 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       240        160   66.67   75.83    6.26       0     0.00         211      2555  |   1-9999 
 RES CONTACTS       149        130   87.25   92.20    9.82       0     0.00         141      1324  |   1-4    
 RES CONTACTS        18          4   22.22   28.57    3.31       0     0.00          14       121  |   5-8    
 RES CONTACTS        73         26   35.62   46.43    2.34       0     0.00          56      1110  |   9-9999 
 
 
 
# WARNING! TARGET 3589 atoms, MODEL 3794 atoms, 3437 common with TARGET 
           Number of atoms possible to evaluate: 319 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    54.07           70.6   126    12.8   981     ARMSMC  
     SECONDARY STRUCTURE . .    43.46           81.0    63    12.7   497     ARMSMC  
     SURFACE . . . . . . . .    57.81           66.0    50    10.1   493     ARMSMC  
     BURIED  . . . . . . . .    51.46           73.7    76    15.6   488     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   339     ARMSSC1 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   303     ARMSSC1 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   187     ARMSSC1 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   174     ARMSSC1 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   165     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0   262     ARMSSC2 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0   186     ARMSSC2 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0   145     ARMSSC2 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0   150     ARMSSC2 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0   112     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    93     ARMSSC3 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    76     ARMSSC3 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    56     ARMSSC3 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    65     ARMSSC3 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0    28     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .     0.00            0.0     0     0.0    35     ARMSSC4 
     RELIABLE SIDE CHAINS  .     0.00            0.0     0     0.0    35     ARMSSC4 
     SECONDARY STRUCTURE . .     0.00            0.0     0     0.0    21     ARMSSC4 
     SURFACE . . . . . . . .     0.00            0.0     0     0.0    26     ARMSSC4 
     BURIED  . . . . . . . .     0.00            0.0     0     0.0     9     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1  168 - 194  27   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    27    168 - 194      2.83     2.83 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  2  196 - 215  20   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    20    196 - 215      3.49     3.49 
  LCS LOCAL_SCORE:            100.00 
 
 FRAGMENT  3  217 - 235  19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    19    217 - 235      4.59     4.59 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1  168 - 194  27   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    22    168 - 189      1.76     2.91 
  LCS LOCAL_SCORE:             70.51 
 
 FRAGMENT  2  196 - 215  20   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    12    202 - 213      1.70     3.94 
  LCS LOCAL_SCORE:             52.50 
 
 FRAGMENT  3  217 - 235  19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     9    218 - 226      1.33     8.01 
  LCS LOCAL_SCORE:             38.23 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1  168 - 194  27   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    20    168 - 187      0.68     3.24 
  LCS LOCAL_SCORE:             59.12 
 
 FRAGMENT  2  196 - 215  20   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    10    203 - 212      0.87     4.51 
  LCS LOCAL_SCORE:             42.75 
 
 FRAGMENT  3  217 - 235  19   Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT     8    219 - 226      0.23     7.83 
  LCS LOCAL_SCORE:             30.19 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS     168       T    20   22   27       H        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     169       L    20   22   27       H        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     170       A    20   22   27       H        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     171       L    20   22   27       H        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     172       E    20   22   27       H        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     173       L    20   22   27       H        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     174       L    20   22   27       H        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     175       Q    20   22   27       H        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     176       Q    20   22   27       H        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     177       D    20   22   27       C        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     178       A    20   22   27       C        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     179       H    20   22   27       C        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     180       L    20   22   27       C        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     181       D    20   22   27       C        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     182       R    20   22   27       E        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     183       V    20   22   27       E        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     184       F    20   22   27       E        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     185       V    20   22   27       E        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     186       P    20   22   27       E        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     187       V    20   22   27       C        0   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     188       G     3   22   27       C        0   0   0   1   1   4   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     189       G     3   22   27       C        0   0   0   1   1   4   4   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     190       G     5    6   27       C        0   1   1   2   2   2   3   5   6   8   9   9  10  10  10  10  11  11  11  11  
 LCS     191       G     5    6   27       H        0   1   1   2   2   2   3   3   3   4   8   9  10  10  10  10  11  11  11  11  
 LCS     192       L     5    6   27       H        0   1   1   2   2   2   3   6   7   9   9   9  10  10  10  10  11  11  11  11  
 LCS     193       A     5    6   27       H        0   1   1   2   2   3   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     194       A     5    6   27       H        0   1   1   2   2   2   3   5   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     195       G     0    0    0       H        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     196       V     8    9   20       H        0   1   1   2   4   4   6   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     197       A     8    9   20       H        1   1   1   2   2   3   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     198       V     8    9   20       H        1   1   1   2   2   2   3   7   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     199       L     8    9   20       H        1   1   1   2   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     200       I     8    9   20       H        1   1   1   2   2   2   5   7   7   9   9   9  10  10  10  10  11  11  11  11  
 LCS     201       K     8    9   20       H        1   1   1   2   2   2   3   3   6   7   8   9  10  10  10  10  11  11  11  11  
 LCS     202       Q     8   12   20       H        1   1   1   2   3   5   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     203       L    10   12   20       H        1   2   4   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     204       M    10   12   20       C        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     205       P    10   12   20       C        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     206       Q    10   12   20       C        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     207       I    10   12   20       C        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     208       K    10   12   20       E        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     209       V    10   12   20       E        2   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     210       I    10   12   20       E        1   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     211       A    10   12   20       E        1   4   5   5   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     212       V    10   12   20       E        0   1   2   2   6   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     213       E     7   12   20       E        0   1   2   2   4   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     214       A     4    6   20       E        0   0   0   0   1   1   1   3   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     215       E     4    6   20       C        0   0   0   0   1   1   1   2   4   4   5   5   6   7   7   8   9  11  11  11  
 LCS     216       D     0    0    0       C        0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  
 LCS     217       S     3    3   19       C        0   0   0   0   1   1   2   3   4   4   5   5   6   7   7   8  11  11  11  11  
 LCS     218       A     3    9   19       C        0   0   0   1   1   1   2   3   4   4   5   5   7  10  10  10  11  11  11  11  
 LCS     219       C     8    9   19       C        1   1   1   1   1   1   2   7   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     220       L     8    9   19       H        1   1   1   1   5   6   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     221       K     8    9   19       H        1   1   1   1   1   1   2   2   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     222       A     8    9   19       H        1   1   1   1   1   1   2   2   3   3   3   4   5   6   7   7  11  11  11  11  
 LCS     223       A     8    9   19       H        1   1   1   1   1   1   2   2   3   3   9   9  10  10  10  10  11  11  11  11  
 LCS     224       L     8    9   19       H        1   1   1   1   3   4   7   8   8   9   9   9  10  10  10  10  11  11  11  11  
 LCS     225       D     8    9   19       C        1   1   1   1   1   1   2   2   3   3   3   3   3   6  10  10  11  11  11  11  
 LCS     226       A     8    9   19       C        1   1   1   1   1   1   2   2   3   3   3   4   5   6   6   6   6   9   9   9  
 LCS     227       G     5    6   19       C        0   0   1   1   1   1   2   2   3   3   3   3   5   6   6   6   6   6   6  11  
 LCS     228       H     5    6   19       C        0   0   1   1   1   1   2   2   3   3   3   3   3   3   3   3   6   6   6   7  
 LCS     229       P     5    6   19       C        0   0   1   1   1   1   2   2   3   3   3   3   3   3   3   3   4   4   4   4  
 LCS     230       V     5    6   19       C        0   0   1   1   1   1   2   2   3   3   3   3   3   3   3   3   4   4   4   4  
 LCS     231       D     4    6   19       C        0   0   1   1   1   1   2   2   3   3   3   3   3   3   3   3   4   4   4   4  
 LCS     232       L     4    6   19       C        0   0   1   1   1   1   2   2   3   3   3   3   3   3   3   3   4   4   4   4  
 LCS     233       P     4    6   19       C        0   0   1   1   1   1   1   2   2   2   3   3   3   3   3   3   4   4   4  11  
 LCS     234       R     4    6   19       C        0   0   1   1   1   1   1   2   2   2   3   3   3   3  10  10  11  11  11  11  
 LCS     235       V     3    6   19       C        0   0   0   0   1   1   1   2   2   8   9   9  10  10  10  10  11  11  11  11  
 LCS    BREAK 
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):   0.29 
 
 NUMBER_OF_CA_Tg:  493      NUMBER_OF_CA_Pr:   66      PERCENT_OF_CA:  13.39  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      13      24      28      29      30      32      36      40      44      45      47      49      50      52      54      54      55      57      57      57  
 GDT PERCENT_OF_CA_Pr   19.70   36.36   42.42   43.94   45.45   48.48   54.55   60.61   66.67   68.18   71.21   74.24   75.76   78.79   81.82   81.82   83.33   86.36   86.36   86.36 
 GDT PERCENT_OF_CA_Tg    2.64    4.87    5.68    5.88    6.09    6.49    7.30    8.11    8.92    9.13    9.53    9.94   10.14   10.55   10.95   10.95   11.16   11.56   11.56   11.56 
 GDT FRAGMENT: Beg-End 177-208 168-210 168-211 168-211 168-212 168-220 168-220 168-224 168-224 168-224 168-224 168-224 168-224 168-235 168-235 168-235 168-235 168-235 168-235 168-235 
 GDT RMS_LOCAL           0.29    0.61    0.75    0.83    1.03    1.59    1.97    2.41    2.88    2.93    3.06    3.24    3.44    3.65    3.94    3.94    4.08    4.35    4.35    4.35 
 GDT RMS_ALL_CA          8.13    8.24    8.25    8.22    8.18    7.80    7.79    7.49    7.47    7.45    7.44    7.43    7.31    7.19    7.18    7.18    7.17    7.30    7.30    7.30 
 
 
 TEST (CA)  RMS =   6.77               (Number of atoms:   66) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    6.77         66    13.4   493     CRMSCA  
     CRN = ALL/NP  . . . . .    0.1026                            CRMSCA  
     SECONDARY STRUCTURE . .    4.18         33    13.3   249     CRMSCA  
     SURFACE . . . . . . . .    8.64         26    10.5   248     CRMSCA  
     BURIED  . . . . . . . .    5.21         40    16.3   245     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    6.84        319    13.2  2415     CRMSMC  
     SECONDARY STRUCTURE . .    4.15        160    13.0  1230     CRMSMC  
     SURFACE . . . . . . . .    8.71        126    10.4  1209     CRMSMC  
     BURIED  . . . . . . . .    5.27        193    16.0  1206     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    7.65         55     3.4  1617     CRMSSC  
     RELIABLE SIDE CHAINS  .    7.65         55     4.1  1329     CRMSSC  
     SECONDARY STRUCTURE . .    4.66         28     3.1   891     CRMSSC  
     SURFACE . . . . . . . .    9.61         22     2.5   869     CRMSSC  
     BURIED  . . . . . . . .    5.99         33     4.4   748     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    6.84        319     8.9  3589     CRMSALL 
     SECONDARY STRUCTURE . .    4.15        160     8.5  1887     CRMSALL 
     SURFACE . . . . . . . .    8.71        126     6.8  1861     CRMSALL 
     BURIED  . . . . . . . .    5.27        193    11.2  1728     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.666      1.000       0.500     66    13.4   493     ERRCA  
     SECONDARY STRUCTURE . .    3.896      1.000       0.500     33    13.3   249     ERRCA  
     SURFACE . . . . . . . .    7.385      1.000       0.500     26    10.5   248     ERRCA  
     BURIED  . . . . . . . .    4.548      1.000       0.500     40    16.3   245     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.678      1.000       0.500    319    13.2  2415     ERRMC  
     SECONDARY STRUCTURE . .    3.829      1.000       0.500    160    13.0  1230     ERRMC  
     SURFACE . . . . . . . .    7.435      1.000       0.500    126    10.4  1209     ERRMC  
     BURIED  . . . . . . . .    4.530      1.000       0.500    193    16.0  1206     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    6.373      1.000       0.500     55     3.4  1617     ERRSC  
     RELIABLE SIDE CHAINS  .    6.373      1.000       0.500     55     4.1  1329     ERRSC  
     SECONDARY STRUCTURE . .    4.254      1.000       0.500     28     3.1   891     ERRSC  
     SURFACE . . . . . . . .    8.172      1.000       0.500     22     2.5   869     ERRSC  
     BURIED  . . . . . . . .    5.174      1.000       0.500     33     4.4   748     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    5.678      1.000       0.500    319     8.9  3589     ERRALL 
     SECONDARY STRUCTURE . .    3.829      1.000       0.500    160     8.5  1887     ERRALL 
     SURFACE . . . . . . . .    7.435      1.000       0.500    126     6.8  1861     ERRALL 
     BURIED  . . . . . . . .    4.530      1.000       0.500    193    11.2  1728     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)         1         3        14        42        57      66     493   DISTCA 
CA  (P)      0.20      0.61      2.84      8.52     11.56             493   DISTCA 
CA  (RMS)    0.95      1.38      2.41      3.68      4.85                   DISTCA 
 
ALL (N)         3        21        69       192       273     319    3589   DISTALL 
ALL (P)      0.08      0.59      1.92      5.35      7.61            3589   DISTALL 
ALL (RMS)    0.77      1.55      2.37      3.53      4.75                   DISTALL 
 
 
 
 
END of the results output 
