 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 157 , MODEL 157 , TARGET 157 
#          The number of residues possible to evaluate: 157 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     2     E     C     C             1.00 
 SSP     3     L     E     E             1.00 
 SSP     4     V     E     E             1.00 
 SSP     5     S     E     E             1.00 
 SSP     6     V     E     E             1.00 
 SSP     7     A     E     E             1.00 
 SSP     8     A     E     E             1.00 
 SSP     9     L     E     E             1.00 
 SSP    10     A     E     C             1.00 
 SSP    11     E     E     C             1.00 
 SSP    12     N     C     C             1.00 
 SSP    13     R     C     C             1.00 
 SSP    14     V     E     E             1.00 
 SSP    15     I     E     E             1.00 
 SSP    16     G     E     E             1.00 
 SSP    17     R     E     E             1.00 
 SSP    18     D     C     C             1.00 
 SSP    19     G     C     C             1.00 
 SSP    20     E     E     E             1.00 
 SSP    21     L     C     C             1.00 
 SSP    22     P     C     C             1.00 
 SSP    23     W     C     C             1.00 
 SSP    24     P     C     C             1.00 
 SSP    25     S     C     C             1.00 
 SSP    26     I     C     C             1.00 
 SSP    27     P     H     H             1.00 
 SSP    28     A     H     H             1.00 
 SSP    29     D     H     H             1.00 
 SSP    30     K     H     H             1.00 
 SSP    31     K     H     H             1.00 
 SSP    32     Q     H     H             1.00 
 SSP    33     Y     H     H             1.00 
 SSP    34     R     H     H             1.00 
 SSP    35     S     H     H             1.00 
 SSP    36     R     H     H             1.00 
 SSP    37     I     C     H             1.00 
 SSP    38     A     C     C             1.00 
 SSP    39     D     C     C             1.00 
 SSP    40     D     C     C             1.00 
 SSP    41     P     C     C             1.00 
 SSP    42     V     E     E             1.00 
 SSP    43     V     E     E             1.00 
 SSP    44     L     E     E             1.00 
 SSP    45     G     E     E             1.00 
 SSP    46     R     H     H             1.00 
 SSP    47     T     H     H             1.00 
 SSP    48     T     H     H             1.00 
 SSP    49     F     H     H             1.00 
 SSP    50     E     H     H             1.00 
 SSP    51     S     H     H             1.00 
 SSP    52     M     C     H             1.00 
 SSP    53     R     C     C             1.00 
 SSP    54     D     C     C             1.00 
 SSP    55     D     C     C             1.00 
 SSP    56     L     C     C             1.00 
 SSP    57     P     C     C             1.00 
 SSP    58     G     C     C             1.00 
 SSP    59     S     C     C             1.00 
 SSP    60     A     C     C             1.00 
 SSP    61     Q     E     E             1.00 
 SSP    62     I     E     E             1.00 
 SSP    63     V     E     E             1.00 
 SSP    64     M     E     E             1.00 
 SSP    65     S     C     C             1.00 
 SSP    66     R     C     C             1.00 
 SSP    67     S     C     C             1.00 
 SSP    68     E     C     C             1.00 
 SSP    69     R     C     C             1.00 
 SSP    70     S     C     C             1.00 
 SSP    71     F     C     C             1.00 
 SSP    72     S     C     C             1.00 
 SSP    73     V     C     C             1.00 
 SSP    74     D     C     C             1.00 
 SSP    75     T     C     C             1.00 
 SSP    76     A     C     C             1.00 
 SSP    77     H     C     E             1.00 
 SSP    78     R     E     E             1.00 
 SSP    79     A     E     E             1.00 
 SSP    80     A     C     C             1.00 
 SSP    81     S     C     C             1.00 
 SSP    82     V     H     H             1.00 
 SSP    83     E     H     H             1.00 
 SSP    84     E     H     H             1.00 
 SSP    85     A     H     H             1.00 
 SSP    86     V     H     H             1.00 
 SSP    87     D     H     H             1.00 
 SSP    88     I     H     H             1.00 
 SSP    89     A     H     H             1.00 
 SSP    90     A     H     H             1.00 
 SSP    91     S     H     H             1.00 
 SSP    92     L     C     C             1.00 
 SSP    93     D     C     C             1.00 
 SSP    94     A     C     C             1.00 
 SSP    95     E     C     C             1.00 
 SSP    96     T     C     C             1.00 
 SSP    97     A     E     E             1.00 
 SSP    98     Y     E     E             1.00 
 SSP    99     V     E     E             1.00 
 SSP   100     I     E     C             1.00 
 SSP   101     G     E     C             1.00 
 SSP   102     G     C     C             1.00 
 SSP   103     A     H     H             1.00 
 SSP   104     A     H     H             1.00 
 SSP   105     I     H     H             1.00 
 SSP   106     Y     H     H             1.00 
 SSP   107     A     H     H             1.00 
 SSP   108     L     H     H             1.00 
 SSP   109     F     H     C             1.00 
 SSP   110     Q     H     H             1.00 
 SSP   111     P     H     H             1.00 
 SSP   112     H     H     H             1.00 
 SSP   113     L     C     C             1.00 
 SSP   114     D     C     C             1.00 
 SSP   115     R     E     E             1.00 
 SSP   116     M     E     E             1.00 
 SSP   117     V     E     E             1.00 
 SSP   118     L     E     E             1.00 
 SSP   119     S     E     E             1.00 
 SSP   120     R     E     E             1.00 
 SSP   121     V     E     C             1.00 
 SSP   122     P     E     C             1.00 
 SSP   123     G     E     C             1.00 
 SSP   124     E     E     C             1.00 
 SSP   125     Y     C     C             1.00 
 SSP   126     E     C     C             1.00 
 SSP   127     G     C     C             1.00 
 SSP   128     D     C     C             1.00 
 SSP   129     T     E     E             1.00 
 SSP   130     Y     E     E             1.00 
 SSP   131     Y     C     C             1.00 
 SSP   132     P     C     C             1.00 
 SSP   133     E     C     C             1.00 
 SSP   134     W     C     C             1.00 
 SSP   135     D     C     C             1.00 
 SSP   136     A     C     H             1.00 
 SSP   137     A     C     H             1.00 
 SSP   138     E     C     H             1.00 
 SSP   139     W     E     C             1.00 
 SSP   140     E     E     E             1.00 
 SSP   141     L     E     E             1.00 
 SSP   142     D     E     E             1.00 
 SSP   143     A     E     E             1.00 
 SSP   144     E     E     E             1.00 
 SSP   145     T     E     E             1.00 
 SSP   146     D     E     E             1.00 
 SSP   147     H     C     E             1.00 
 SSP   148     E     C     C             1.00 
 SSP   149     G     C     C             1.00 
 SSP   150     F     C     C             1.00 
 SSP   151     T     E     E             1.00 
 SSP   152     L     E     E             1.00 
 SSP   153     Q     E     E             1.00 
 SSP   154     E     E     E             1.00 
 SSP   155     W     E     E             1.00 
 SSP   156     V     E     E             1.00 
 SSP   157     R     E     E             1.00 
 SSP   158     S     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              89.2      97.2     83.9     89.2    100.0 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        92.7      84.8     96.4     95.1    100.0 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           14             100.0               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            1                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     157    100.0     89.2 
 
 BIN  0.00 - 1.00      1.00     157    100.0     89.2 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         154             154           158            154 
 ALL CONTACTS (< 8.0A)     718             720           733            720 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       718        606   84.40   84.17   84.17       0     0.00         720       720  |   1-9999 
 RES CONTACTS       370        344   92.97   95.03   95.03       0     0.00         362       362  |   1-4    
 RES CONTACTS        41         26   63.41   74.29   74.29       0     0.00          35        35  |   5-8    
 RES CONTACTS       307        236   76.87   73.07   73.07       0     0.00         323       323  |   9-9999 
 
 
 
# WARNING! TARGET 1211 atoms, MODEL 1266 atoms, 1211 common with TARGET 
           Number of atoms possible to evaluate: 1211 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    51.47           71.5   312   100.0   312     ARMSMC  
     SECONDARY STRUCTURE . .    24.43           86.2   174   100.0   174     ARMSMC  
     SURFACE . . . . . . . .    56.41           66.5   176   100.0   176     ARMSMC  
     BURIED  . . . . . . . .    44.28           77.9   136   100.0   136     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    77.95           53.6   125   100.0   125     ARMSSC1 
     RELIABLE SIDE CHAINS  .    77.81           53.6   112   100.0   112     ARMSSC1 
     SECONDARY STRUCTURE . .    77.30           58.6    70   100.0    70     ARMSSC1 
     SURFACE . . . . . . . .    82.09           50.0    72   100.0    72     ARMSSC1 
     BURIED  . . . . . . . .    71.94           58.5    53   100.0    53     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    72.81           48.9    92   100.0    92     ARMSSC2 
     RELIABLE SIDE CHAINS  .    64.69           53.2    77   100.0    77     ARMSSC2 
     SECONDARY STRUCTURE . .    78.22           51.0    49   100.0    49     ARMSSC2 
     SURFACE . . . . . . . .    75.15           36.4    55   100.0    55     ARMSSC2 
     BURIED  . . . . . . . .    69.17           67.6    37   100.0    37     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    68.52           45.5    33   100.0    33     ARMSSC3 
     RELIABLE SIDE CHAINS  .    57.72           48.3    29   100.0    29     ARMSSC3 
     SECONDARY STRUCTURE . .    78.29           42.9    21   100.0    21     ARMSSC3 
     SURFACE . . . . . . . .    56.31           52.0    25   100.0    25     ARMSSC3 
     BURIED  . . . . . . . .    97.25           25.0     8   100.0     8     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    56.17           30.8    13   100.0    13     ARMSSC4 
     RELIABLE SIDE CHAINS  .    56.17           30.8    13   100.0    13     ARMSSC4 
     SECONDARY STRUCTURE . .    53.89           44.4     9   100.0     9     ARMSSC4 
     SURFACE . . . . . . . .    57.24           36.4    11   100.0    11     ARMSSC4 
     BURIED  . . . . . . . .    49.86            0.0     2   100.0     2     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    2 - 158  157  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   157      2 - 158      2.05     2.05 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    2 - 158  157  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   152      2 - 153      1.99     2.05 
  LCS LOCAL_SCORE:             95.46 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    2 - 158  157  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    51     96 - 146      0.98     2.18 
  LCS LOCAL_SCORE:             22.09 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       2       E    45  152  157       C       10  41  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS       3       L    45  152  157       E       12  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS       4       V    45  152  157       E        9  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS       5       S    45  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS       6       V    45  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS       7       A    45  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS       8       A    45  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS       9       L    45  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      10       A    45  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      11       E    45  152  157       E       10  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      12       N    45  152  157       C        8  38  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      13       R    45  152  157       C       13  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      14       V    45  152  157       E       17  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      15       I    45  152  157       E       17  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      16       G    45  152  157       E       10  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      17       R    45  152  157       E        9  42  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      18       D    45  152  157       C        8  33  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      19       G    45  152  157       C       10  33  65  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      20       E    45  152  157       E       10  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      21       L    45  152  157       C       10  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      22       P    45  152  157       C        3  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      23       W    45  152  157       C       10  38  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      24       P    45  152  157       C       10  36  65  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      25       S    45  152  157       C        3  14  47  66  80  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      26       I    45  152  157       C       10  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      27       P    45  152  157       H        9  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      28       A    45  152  157       H       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      29       D    45  152  157       H       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      30       K    45  152  157       H       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      31       K    45  152  157       H       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      32       Q    45  152  157       H       10  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      33       Y    45  152  157       H       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      34       R    45  152  157       H        6  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      35       S    45  152  157       H       10  36  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      36       R    45  152  157       H       13  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      37       I    45  152  157       C       10  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      38       A    45  152  157       C       13  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      39       D    45  152  157       C       17  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      40       D    45  152  157       C       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      41       P    45  152  157       C       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      42       V    45  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      43       V    45  152  157       E       18  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      44       L    45  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      45       G    45  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      46       R    45  152  157       H        7  32  57  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      47       T    24  152  157       H        7  24  49  70  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      48       T    24  152  157       H        7  26  52  74  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      49       F    24  152  157       H        7  28  57  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      50       E    24  152  157       H        7  24  39  60  80  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      51       S    23  152  157       H        5  24  38  60  73  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      52       M    23  152  157       C        7  26  51  70  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      53       R    23  152  157       C        7  24  40  61  77  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      54       D     4  152  157       C        1   1   4  56  78  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      55       D     4  152  157       C        1  10  15  29  61  76  87  94  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      56       L     4  152  157       C       10  35  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      57       P     4  152  157       C        1   2   3   5  15  24  67  85  94  98  98 100 100 100 100 100 100 100 100 100  
 LCS      58       G     4  152  157       C        1   2   3   5  24  57  85  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      59       S     9  152  157       C        3  26  57  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      60       A     9  152  157       C       15  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      61       Q     9  152  157       E       13  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      62       I     9  152  157       E        9  37  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      63       V     9  152  157       E       17  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      64       M     9  152  157       E       15  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      65       S     9  152  157       C       18  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      66       R     9  152  157       C       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      67       S     9  152  157       C        4  26  56  74  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      68       E     8  152  157       C        1   5  13  45  67  84  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      69       R     3  152  157       C        1  21  50  73  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      70       S     4  152  157       C        5  24  54  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      71       F     4  152  157       C        1   1  42  68  82  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      72       S     4  152  157       C        1   1   2   5  11  19  60  84  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      73       V     4  152  157       C        1   5  15  48  65  76  91  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      74       D     3  152  157       C        1   1   3   8  37  64  82  92  95  98  99 100 100 100 100 100 100 100 100 100  
 LCS      75       T     3  152  157       C        1   7  10  27  46  74  86  94  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      76       A    18  152  157       C        6  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      77       H    18  152  157       C       15  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      78       R    18  152  157       E       13  41  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      79       A    18  152  157       E       12  42  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      80       A    18  152  157       C       13  39  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      81       S    18  152  157       C       13  33  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      82       V    18  152  157       H        7  19  48  71  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      83       E    18  152  157       H        8  22  48  71  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      84       E    18  152  157       H        9  29  57  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      85       A    18  152  157       H       13  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      86       V    18  152  157       H        8  31  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      87       D    18  152  157       H        8  29  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      88       I    18  152  157       H       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      89       A    18  152  157       H        8  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      90       A    18  152  157       H        8  28  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      91       S    18  152  157       H       17  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      92       L    18  152  157       C        8  38  65  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      93       D    18  152  157       C        3  33  63  75  82  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      94       A     3  152  157       C        1   8  29  63  78  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      95       E    27  152  157       C        1   2  21  52  67  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      96       T    51  152  157       C        9  42  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      97       A    51  152  157       E       18  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      98       Y    51  152  157       E       17  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS      99       V    51  152  157       E       13  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     100       I    51  152  157       E       12  42  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     101       G    51  152  157       E       12  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     102       G    51  152  157       C        9  36  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     103       A    51  152  157       H       12  42  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     104       A    51  152  157       H       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     105       I    51  152  157       H       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     106       Y    51  152  157       H       12  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     107       A    51  152  157       H        9  33  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     108       L    51  152  157       H        9  33  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     109       F    51  152  157       H        9  33  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     110       Q    51  152  157       H        8  29  63  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     111       P    51  152  157       H        9  35  62  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     112       H    51  152  157       H       12  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     113       L    51  152  157       C       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     114       D    51  152  157       C       14  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     115       R    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     116       M    51  152  157       E       14  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     117       V    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     118       L    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     119       S    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     120       R    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     121       V    51  152  157       E       13  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     122       P    51  152  157       E        7  42  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     123       G    51  152  157       E       14  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     124       E    51  152  157       E        8  42  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     125       Y    51  152  157       C        8  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     126       E    51  152  157       C        8  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     127       G    51  152  157       C       12  40  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     128       D    51  152  157       C        8  42  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     129       T    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     130       Y    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     131       Y    51  152  157       C       11  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     132       P    51  152  157       C       13  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     133       E    51  152  157       C       13  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     134       W    51  152  157       C        7  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     135       D    51  152  157       C       10  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     136       A    51  152  157       C        7  42  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     137       A    51  152  157       C        7  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     138       E    51  152  157       C       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     139       W    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     140       E    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     141       L    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     142       D    51  152  157       E        8  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     143       A    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     144       E    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     145       T    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     146       D    51  152  157       E       19  43  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     147       H    38  152  157       C        2  18  59  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     148       E    38  152  157       C        1  10  49  74  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     149       G    38  152  157       C        2  28  66  75  83  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     150       F     5  152  157       C        2   3   5  30  73  86  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     151       T     5  152  157       E        2   3  24  57  78  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     152       L     6  152  157       E        2   3   3  26  61  85  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     153       Q     6  152  157       E        2   5  19  43  77  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     154       E     6   85  157       E        2   5  21  46  78  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     155       W     6   85  157       E        2  12  27  56  76  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     156       V     6   85  157       E        2   8  18  66  82  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     157       R     6   85  157       E        2   8  32  62  81  87  92  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS     158       S     6   85  157       C        1   3  10  16  47  72  89  95  96  98  99 100 100 100 100 100 100 100 100 100  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  22.09 
 
 NUMBER_OF_CA_Tg:  157      NUMBER_OF_CA_Pr:  157      PERCENT_OF_CA: 100.00  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      31      69     105     119     131     138     146     150     152     154     156     157     157     157     157     157     157     157     157     157  
 GDT PERCENT_OF_CA_Pr   19.75   43.95   66.88   75.80   83.44   87.90   92.99   95.54   96.82   98.09   99.36  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   19.75   43.95   66.88   75.80   83.44   87.90   92.99   95.54   96.82   98.09   99.36  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT FRAGMENT: Beg-End   5-145   3-146   2-146   2-149   2-149   2-157   2-157   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158 
 GDT RMS_LOCAL           0.36    0.66    0.96    1.08    1.29    1.44    1.61    1.72    1.81    1.88    2.00    2.05    2.05    2.05    2.05    2.05    2.05    2.05    2.05    2.05 
 GDT RMS_ALL_CA          2.07    2.08    2.13    2.14    2.09    2.08    2.06    2.05    2.05    2.05    2.05    2.05    2.05    2.05    2.05    2.05    2.05    2.05    2.05    2.05 
 
 
 TEST (CA)  RMS =   2.05               (Number of atoms:  157) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    2.05        157   100.0   157     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0130                            CRMSCA  
     SECONDARY STRUCTURE . .    1.56         87   100.0    87     CRMSCA  
     SURFACE . . . . . . . .    2.27         89   100.0    89     CRMSCA  
     BURIED  . . . . . . . .    1.71         68   100.0    68     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    2.18        773   100.0   773     CRMSMC  
     SECONDARY STRUCTURE . .    1.69        431   100.0   431     CRMSMC  
     SURFACE . . . . . . . .    2.41        439   100.0   439     CRMSMC  
     BURIED  . . . . . . . .    1.83        334   100.0   334     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    4.13        583   100.0   583     CRMSSC  
     RELIABLE SIDE CHAINS  .    4.18        513   100.0   513     CRMSSC  
     SECONDARY STRUCTURE . .    3.73        328   100.0   328     CRMSSC  
     SURFACE . . . . . . . .    4.38        327   100.0   327     CRMSSC  
     BURIED  . . . . . . . .    3.79        256   100.0   256     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    3.21       1211   100.0  1211     CRMSALL 
     SECONDARY STRUCTURE . .    2.83        676   100.0   676     CRMSALL 
     SURFACE . . . . . . . .    3.43        683   100.0   683     CRMSALL 
     BURIED  . . . . . . . .    2.91        528   100.0   528     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.626      1.000       0.500    157   100.0   157     ERRCA  
     SECONDARY STRUCTURE . .    1.275      1.000       0.500     87   100.0    87     ERRCA  
     SURFACE . . . . . . . .    1.854      1.000       0.500     89   100.0    89     ERRCA  
     BURIED  . . . . . . . .    1.327      1.000       0.500     68   100.0    68     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.702      1.000       0.500    773   100.0   773     ERRMC  
     SECONDARY STRUCTURE . .    1.353      1.000       0.500    431   100.0   431     ERRMC  
     SURFACE . . . . . . . .    1.925      1.000       0.500    439   100.0   439     ERRMC  
     BURIED  . . . . . . . .    1.408      1.000       0.500    334   100.0   334     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    3.106      1.000       0.500    583   100.0   583     ERRSC  
     RELIABLE SIDE CHAINS  .    3.103      1.000       0.500    513   100.0   513     ERRSC  
     SECONDARY STRUCTURE . .    2.743      1.000       0.500    328   100.0   328     ERRSC  
     SURFACE . . . . . . . .    3.434      1.000       0.500    327   100.0   327     ERRSC  
     BURIED  . . . . . . . .    2.687      1.000       0.500    256   100.0   256     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    2.332      1.000       0.500   1211   100.0  1211     ERRALL 
     SECONDARY STRUCTURE . .    1.990      1.000       0.500    676   100.0   676     ERRALL 
     SURFACE . . . . . . . .    2.586      1.000       0.500    683   100.0   683     ERRALL 
     BURIED  . . . . . . . .    2.002      1.000       0.500    528   100.0   528     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        56       114       136       153       157     157     157   DISTCA 
CA  (P)     35.67     72.61     86.62     97.45    100.00             157   DISTCA 
CA  (RMS)    0.62      1.13      1.43      1.84      2.05                   DISTCA 
 
ALL (N)       323       737       935      1085      1193    1211    1211   DISTALL 
ALL (P)     26.67     60.86     77.21     89.60     98.51            1211   DISTALL 
ALL (RMS)    0.64      1.20      1.56      2.03      2.90                   DISTALL 
 
 
 
 
END of the results output 
