 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
#          The number of residues in SS section: 157 , MODEL 157 , TARGET 157 
#          The number of residues possible to evaluate: 157 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     2     E     C     C             1.00 
 SSP     3     L     E     E             1.00 
 SSP     4     V     E     E             1.00 
 SSP     5     S     E     E             1.00 
 SSP     6     V     E     E             1.00 
 SSP     7     A     E     E             1.00 
 SSP     8     A     E     E             1.00 
 SSP     9     L     E     E             1.00 
 SSP    10     A     E     C             1.00 
 SSP    11     E     E     C             1.00 
 SSP    12     N     C     C             1.00 
 SSP    13     R     C     C             1.00 
 SSP    14     V     E     E             1.00 
 SSP    15     I     E     E             1.00 
 SSP    16     G     E     E             1.00 
 SSP    17     R     E     E             1.00 
 SSP    18     D     C     C             1.00 
 SSP    19     G     C     C             1.00 
 SSP    20     E     E     E             1.00 
 SSP    21     L     C     C             1.00 
 SSP    22     P     C     C             1.00 
 SSP    23     W     C     C             1.00 
 SSP    24     P     C     C             1.00 
 SSP    25     S     C     C             1.00 
 SSP    26     I     C     C             1.00 
 SSP    27     P     H     H             1.00 
 SSP    28     A     H     H             1.00 
 SSP    29     D     H     H             1.00 
 SSP    30     K     H     H             1.00 
 SSP    31     K     H     H             1.00 
 SSP    32     Q     H     H             1.00 
 SSP    33     Y     H     H             1.00 
 SSP    34     R     H     H             1.00 
 SSP    35     S     H     H             1.00 
 SSP    36     R     H     H             1.00 
 SSP    37     I     C     H             1.00 
 SSP    38     A     C     C             1.00 
 SSP    39     D     C     C             1.00 
 SSP    40     D     C     C             1.00 
 SSP    41     P     C     E             1.00 
 SSP    42     V     E     E             1.00 
 SSP    43     V     E     E             1.00 
 SSP    44     L     E     E             1.00 
 SSP    45     G     E     E             1.00 
 SSP    46     R     H     H             1.00 
 SSP    47     T     H     H             1.00 
 SSP    48     T     H     H             1.00 
 SSP    49     F     H     H             1.00 
 SSP    50     E     H     H             1.00 
 SSP    51     S     H     H             1.00 
 SSP    52     M     C     H             1.00 
 SSP    53     R     C     C             1.00 
 SSP    54     D     C     C             1.00 
 SSP    55     D     C     C             1.00 
 SSP    56     L     C     C             1.00 
 SSP    57     P     C     C             1.00 
 SSP    58     G     C     C             1.00 
 SSP    59     S     C     C             1.00 
 SSP    60     A     C     E             1.00 
 SSP    61     Q     E     E             1.00 
 SSP    62     I     E     E             1.00 
 SSP    63     V     E     E             1.00 
 SSP    64     M     E     E             1.00 
 SSP    65     S     C     C             1.00 
 SSP    66     R     C     C             1.00 
 SSP    67     S     C     C             1.00 
 SSP    68     E     C     H             1.00 
 SSP    69     R     C     H             1.00 
 SSP    70     S     C     H             1.00 
 SSP    71     F     C     H             1.00 
 SSP    72     S     C     C             1.00 
 SSP    73     V     C     C             1.00 
 SSP    74     D     C     C             1.00 
 SSP    75     T     C     C             1.00 
 SSP    76     A     C     C             1.00 
 SSP    77     H     C     E             1.00 
 SSP    78     R     E     E             1.00 
 SSP    79     A     E     E             1.00 
 SSP    80     A     C     C             1.00 
 SSP    81     S     C     C             1.00 
 SSP    82     V     H     H             1.00 
 SSP    83     E     H     H             1.00 
 SSP    84     E     H     H             1.00 
 SSP    85     A     H     H             1.00 
 SSP    86     V     H     H             1.00 
 SSP    87     D     H     H             1.00 
 SSP    88     I     H     H             1.00 
 SSP    89     A     H     H             1.00 
 SSP    90     A     H     H             1.00 
 SSP    91     S     H     H             1.00 
 SSP    92     L     C     H             1.00 
 SSP    93     D     C     C             1.00 
 SSP    94     A     C     C             1.00 
 SSP    95     E     C     C             1.00 
 SSP    96     T     C     C             1.00 
 SSP    97     A     E     E             1.00 
 SSP    98     Y     E     E             1.00 
 SSP    99     V     E     E             1.00 
 SSP   100     I     E     C             1.00 
 SSP   101     G     E     C             1.00 
 SSP   102     G     C     C             1.00 
 SSP   103     A     H     H             1.00 
 SSP   104     A     H     H             1.00 
 SSP   105     I     H     H             1.00 
 SSP   106     Y     H     H             1.00 
 SSP   107     A     H     H             1.00 
 SSP   108     L     H     H             1.00 
 SSP   109     F     H     H             1.00 
 SSP   110     Q     H     H             1.00 
 SSP   111     P     H     H             1.00 
 SSP   112     H     H     H             1.00 
 SSP   113     L     C     C             1.00 
 SSP   114     D     C     C             1.00 
 SSP   115     R     E     E             1.00 
 SSP   116     M     E     E             1.00 
 SSP   117     V     E     E             1.00 
 SSP   118     L     E     E             1.00 
 SSP   119     S     E     E             1.00 
 SSP   120     R     E     E             1.00 
 SSP   121     V     E     C             1.00 
 SSP   122     P     E     C             1.00 
 SSP   123     G     E     C             1.00 
 SSP   124     E     E     C             1.00 
 SSP   125     Y     C     C             1.00 
 SSP   126     E     C     C             1.00 
 SSP   127     G     C     C             1.00 
 SSP   128     D     C     C             1.00 
 SSP   129     T     E     E             1.00 
 SSP   130     Y     E     E             1.00 
 SSP   131     Y     C     C             1.00 
 SSP   132     P     C     C             1.00 
 SSP   133     E     C     C             1.00 
 SSP   134     W     C     C             1.00 
 SSP   135     D     C     C             1.00 
 SSP   136     A     C     C             1.00 
 SSP   137     A     C     C             1.00 
 SSP   138     E     C     C             1.00 
 SSP   139     W     E     C             1.00 
 SSP   140     E     E     E             1.00 
 SSP   141     L     E     E             1.00 
 SSP   142     D     E     E             1.00 
 SSP   143     A     E     E             1.00 
 SSP   144     E     E     E             1.00 
 SSP   145     T     E     E             1.00 
 SSP   146     D     E     E             1.00 
 SSP   147     H     C     E             1.00 
 SSP   148     E     C     C             1.00 
 SSP   149     G     C     C             1.00 
 SSP   150     F     C     C             1.00 
 SSP   151     T     E     E             1.00 
 SSP   152     L     E     E             1.00 
 SSP   153     Q     E     E             1.00 
 SSP   154     E     E     E             1.00 
 SSP   155     W     E     E             1.00 
 SSP   156     V     E     E             1.00 
 SSP   157     R     E     E             1.00 
 SSP   158     S     C     C             1.00 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              87.3     100.0     83.9     83.1    100.0 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        88.1     100.0     96.4     76.7    100.0 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           14             100.0               0.0 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     157    100.0     87.3 
 
 BIN  0.00 - 1.00      1.00     157    100.0     87.3 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         154             154           159            154 
 ALL CONTACTS (< 8.0A)     720             720           747            720 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       720        625   86.81   86.81   86.81       0     0.00         720       720  |   1-9999 
 RES CONTACTS       366        345   94.26   95.30   95.30       0     0.00         362       362  |   1-4    
 RES CONTACTS        36         25   69.44   71.43   71.43       0     0.00          35        35  |   5-8    
 RES CONTACTS       318        255   80.19   78.95   78.95       0     0.00         323       323  |   9-9999 
 
 
 
# WARNING! TARGET 1211 atoms, MODEL 1266 atoms, 1211 common with TARGET 
           Number of atoms possible to evaluate: 1201 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    44.65           77.2   312   100.0   312     ARMSMC  
     SECONDARY STRUCTURE . .    22.09           90.2   174   100.0   174     ARMSMC  
     SURFACE . . . . . . . .    48.54           72.7   176   100.0   176     ARMSMC  
     BURIED  . . . . . . . .    39.05           83.1   136   100.0   136     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    73.70           52.8   125   100.0   125     ARMSSC1 
     RELIABLE SIDE CHAINS  .    70.16           54.5   112   100.0   112     ARMSSC1 
     SECONDARY STRUCTURE . .    75.62           51.4    70   100.0    70     ARMSSC1 
     SURFACE . . . . . . . .    74.18           45.8    72   100.0    72     ARMSSC1 
     BURIED  . . . . . . . .    73.03           62.3    53   100.0    53     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    68.04           55.4    92   100.0    92     ARMSSC2 
     RELIABLE SIDE CHAINS  .    65.69           55.8    77   100.0    77     ARMSSC2 
     SECONDARY STRUCTURE . .    72.81           53.1    49   100.0    49     ARMSSC2 
     SURFACE . . . . . . . .    66.86           49.1    55   100.0    55     ARMSSC2 
     BURIED  . . . . . . . .    69.75           64.9    37   100.0    37     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    75.53           36.4    33   100.0    33     ARMSSC3 
     RELIABLE SIDE CHAINS  .    74.50           37.9    29   100.0    29     ARMSSC3 
     SECONDARY STRUCTURE . .    80.85           47.6    21   100.0    21     ARMSSC3 
     SURFACE . . . . . . . .    76.04           36.0    25   100.0    25     ARMSSC3 
     BURIED  . . . . . . . .    73.90           37.5     8   100.0     8     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    56.01           46.2    13   100.0    13     ARMSSC4 
     RELIABLE SIDE CHAINS  .    56.01           46.2    13   100.0    13     ARMSSC4 
     SECONDARY STRUCTURE . .    53.02           55.6     9   100.0     9     ARMSSC4 
     SURFACE . . . . . . . .    58.07           54.5    11   100.0    11     ARMSSC4 
     BURIED  . . . . . . . .    42.99            0.0     2   100.0     2     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    2 - 158  157  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   157      2 - 158      2.28     2.28 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    2 - 158  157  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    86     73 - 158      1.99     2.36 
  LCS LOCAL_SCORE:             48.77 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    2 - 158  157  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    55     92 - 146      0.96     2.64 
  LONGEST_CONTINUOUS_SEGMENT    55     93 - 147      0.98     2.61 
  LCS LOCAL_SCORE:             23.17 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       2       E    44   66  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS       3       L    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS       4       V    44   66  157       E       21  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS       5       S    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS       6       V    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS       7       A    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS       8       A    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS       9       L    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      10       A    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      11       E    44   66  157       E       12  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      12       N    44   66  157       C       10  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      13       R    44   66  157       C       22  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      14       V    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      15       I    44   66  157       E       22  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      16       G    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      17       R    44   66  157       E       15  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      18       D    44   66  157       C        3  34  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      19       G    44   66  157       C       22  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      20       E    44   66  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      21       L    44   66  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      22       P    44   66  157       C        4  44  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      23       W    44   66  157       C       21  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      24       P    44   66  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      25       S    44   66  157       C        1  21  43  62  72  84  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      26       I    44   66  157       C       14  46  60  74  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      27       P    44   66  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      28       A    44   66  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      29       D    44   66  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      30       K    44   66  157       H       21  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      31       K    44   66  157       H       12  45  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      32       Q    44   66  157       H        7  45  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      33       Y    44   66  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      34       R    44   66  157       H        6  26  60  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      35       S    44   66  157       H        6  31  51  74  79  85  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      36       R    44   66  157       H       10  45  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      37       I    44   66  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      38       A    44   66  157       C       15  47  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      39       D    44   66  157       C       19  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      40       D    44   66  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      41       P    44   66  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      42       V    44   66  157       E       23  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      43       V    44   66  157       E       11  47  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      44       L    44   66  157       E       15  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      45       G    44   66  157       E       17  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      46       R    21   66  157       H        7  29  58  74  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      47       T    21   66  157       H        7  27  47  70  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      48       T    21   66  157       H        8  33  60  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      49       F    21   66  157       H        8  35  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      50       E    21   66  157       H        7  27  47  68  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      51       S    21   66  157       H        7  27  42  59  77  84  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      52       M    21   66  157       C       10  33  57  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      53       R    21   66  157       C        7  29  49  70  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      54       D     4   66  157       C        1  14  51  61  72  83  90  92  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      55       D     4   66  157       C        1   2  28  45  59  67  80  90  93  96  98  99 100 100 100 100 100 100 100 100  
 LCS      56       L     4   66  157       C        1  31  60  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      57       P     4   66  157       C        1   2   3   3   9  21  33  59  87  92  97  99 100 100 100 100 100 100 100 100  
 LCS      58       G     4   66  157       C        1   2   3   7  12  22  51  91  92  97  98  99 100 100 100 100 100 100 100 100  
 LCS      59       S    10   66  157       C        8  29  57  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      60       A    10   66  157       C       12  47  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      61       Q    10   66  157       E       11  44  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      62       I    10   66  157       E       10  36  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      63       V    10   66  157       E       11  43  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      64       M    10   66  157       E       14  47  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      65       S    10   66  157       C        8  42  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      66       R    10   66  157       C        4  27  57  74  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      67       S    10   66  157       C        3   5  19  42  59  78  84  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      68       E    10   12  157       C        3   5   7  15  29  59  75  87  92  97  98  99 100 100 100 100 100 100 100 100  
 LCS      69       R    10   12  157       C        3   5   7  15  26  53  75  87  91  96  98  99 100 100 100 100 100 100 100 100  
 LCS      70       S     3   79  157       C        1   1   1   1   5   6  13  44  60  68  94  99 100 100 100 100 100 100 100 100  
 LCS      71       F     7   83  157       C        1   9  26  49  66  77  87  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      72       S     7   84  157       C        4   9  15  26  58  75  85  92  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      73       V     7   86  157       C        2   5  15  36  53  77  85  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      74       D     7   86  157       C        2   3  22  38  53  72  87  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      75       T    16   86  157       C        3   5  23  42  60  76  88  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      76       A    16   86  157       C        2  20  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      77       H    16   86  157       C       11  35  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      78       R    16   86  157       E       10  33  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      79       A    16   86  157       E       10  29  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      80       A    16   86  157       C       10  29  57  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      81       S    16   86  157       C        8  28  55  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      82       V    16   86  157       H        8  29  55  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      83       E    16   86  157       H       10  33  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      84       E    16   86  157       H       10  34  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      85       A    16   86  157       H       10  35  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      86       V    16   86  157       H        8  35  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      87       D    16   86  157       H        8  35  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      88       I    16   86  157       H        8  35  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      89       A    16   86  157       H       11  43  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      90       A    16   86  157       H       10  33  59  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      91       S    34   86  157       H        3  21  42  67  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      92       L    55   86  157       C        3   8  43  66  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      93       D    55   86  157       C       19  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      94       A    55   86  157       C       19  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      95       E    55   86  157       C       19  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      96       T    55   86  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      97       A    55   86  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      98       Y    55   86  157       E       20  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS      99       V    55   86  157       E       22  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     100       I    55   86  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     101       G    55   86  157       E       12  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     102       G    55   86  157       C       11  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     103       A    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     104       A    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     105       I    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     106       Y    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     107       A    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     108       L    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     109       F    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     110       Q    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     111       P    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     112       H    55   86  157       H       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     113       L    55   86  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     114       D    55   86  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     115       R    55   86  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     116       M    55   86  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     117       V    55   86  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     118       L    55   86  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     119       S    55   86  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     120       R    55   86  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     121       V    55   86  157       E       10  47  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     122       P    55   86  157       E        8  47  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     123       G    55   86  157       E       14  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     124       E    55   86  157       E        5  36  59  74  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     125       Y    55   86  157       C        7  33  60  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     126       E    55   86  157       C       10  44  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     127       G    55   86  157       C       15  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     128       D    55   86  157       C       13  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     129       T    55   86  157       E        7  47  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     130       Y    55   86  157       E       14  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     131       Y    55   86  157       C        9  47  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     132       P    55   86  157       C       14  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     133       E    55   86  157       C       19  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     134       W    55   86  157       C       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     135       D    55   86  157       C        9  46  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     136       A    55   86  157       C        3   7  18  63  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     137       A    55   86  157       C        3  10  54  70  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     138       E    55   86  157       C       17  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     139       W    55   86  157       E       22  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     140       E    55   86  157       E       21  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     141       L    55   86  157       E       21  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     142       D    55   86  157       E       19  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     143       A    55   86  157       E       22  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     144       E    55   86  157       E       24  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     145       T    55   86  157       E       23  48  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     146       D    55   86  157       E       19  47  61  75  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     147       H    55   86  157       C        3  12  42  67  80  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     148       E    12   86  157       C        2   3   7  14  53  81  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     149       G    12   86  157       C        2   5   8  19  63  82  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     150       F     6   86  157       C        2   3   3   9  73  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     151       T     6   86  157       E        1   5   8  24  63  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     152       L     6   86  157       E        1   3   3  18  64  85  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     153       Q     6   86  157       E        1   3   7  26  63  84  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     154       E     6   86  157       E        2  10  15  36  72  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     155       W     6   86  157       E        2   3  10  31  64  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     156       V     6   86  157       E        2   3  15  38  72  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     157       R     6   86  157       E        2   3  11  45  74  86  90  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS     158       S     5   86  157       C        1   3   6  15  26  71  89  94  96  97  98  99 100 100 100 100 100 100 100 100  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  23.17 
 
 NUMBER_OF_CA_Tg:  157      NUMBER_OF_CA_Pr:  157      PERCENT_OF_CA: 100.00  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      39      76      97     118     126     136     142     149     151     153     155     156     157     157     157     157     157     157     157     157  
 GDT PERCENT_OF_CA_Pr   24.84   48.41   61.78   75.16   80.25   86.62   90.45   94.90   96.18   97.45   98.73   99.36  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   24.84   48.41   61.78   75.16   80.25   86.62   90.45   94.90   96.18   97.45   98.73   99.36  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT FRAGMENT: Beg-End   2-134   2-145   2-146   2-146   2-147   2-157   2-157   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158   2-158 
 GDT RMS_LOCAL           0.34    0.65    0.93    1.18    1.30    1.55    1.67    1.93    1.98    2.07    2.17    2.21    2.28    2.28    2.28    2.28    2.28    2.28    2.28    2.28 
 GDT RMS_ALL_CA          2.63    2.60    2.36    2.36    2.32    2.32    2.33    2.28    2.28    2.28    2.28    2.28    2.28    2.28    2.28    2.28    2.28    2.28    2.28    2.28 
 
 
 TEST (CA)  RMS =   2.28               (Number of atoms:  157) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    2.28        157   100.0   157     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0145                            CRMSCA  
     SECONDARY STRUCTURE . .    1.64         87   100.0    87     CRMSCA  
     SURFACE . . . . . . . .    2.59         89   100.0    89     CRMSCA  
     BURIED  . . . . . . . .    1.79         68   100.0    68     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    2.36        773   100.0   773     CRMSMC  
     SECONDARY STRUCTURE . .    1.76        431   100.0   431     CRMSMC  
     SURFACE . . . . . . . .    2.68        439   100.0   439     CRMSMC  
     BURIED  . . . . . . . .    1.88        334   100.0   334     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    4.09        573    98.3   583     CRMSSC  
     RELIABLE SIDE CHAINS  .    4.13        503    98.1   513     CRMSSC  
     SECONDARY STRUCTURE . .    3.96        323    98.5   328     CRMSSC  
     SURFACE . . . . . . . .    4.37        322    98.5   327     CRMSSC  
     BURIED  . . . . . . . .    3.70        251    98.0   256     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    3.25       1201    99.2  1211     CRMSALL 
     SECONDARY STRUCTURE . .    2.99        671    99.3   676     CRMSALL 
     SURFACE . . . . . . . .    3.52        678    99.3   683     CRMSALL 
     BURIED  . . . . . . . .    2.87        523    99.1   528     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.787      0.225       0.135    157   100.0   157     ERRCA  
     SECONDARY STRUCTURE . .    0.586      0.208       0.129     87   100.0    87     ERRCA  
     SURFACE . . . . . . . .    0.928      0.238       0.133     89   100.0    89     ERRCA  
     BURIED  . . . . . . . .    0.603      0.209       0.139     68   100.0    68     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    0.846      0.234       0.140    773   100.0   773     ERRMC  
     SECONDARY STRUCTURE . .    0.643      0.216       0.129    431   100.0   431     ERRMC  
     SURFACE . . . . . . . .    0.993      0.248       0.140    439   100.0   439     ERRMC  
     BURIED  . . . . . . . .    0.653      0.216       0.140    334   100.0   334     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.806      0.317       0.182    573    98.3   583     ERRSC  
     RELIABLE SIDE CHAINS  .    1.810      0.312       0.180    503    98.1   513     ERRSC  
     SECONDARY STRUCTURE . .    1.803      0.329       0.185    323    98.5   328     ERRSC  
     SURFACE . . . . . . . .    1.996      0.327       0.180    322    98.5   327     ERRSC  
     BURIED  . . . . . . . .    1.562      0.304       0.184    251    98.0   256     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.270      0.269       0.157   1201    99.2  1211     ERRALL 
     SECONDARY STRUCTURE . .    1.176      0.267       0.154    671    99.3   676     ERRALL 
     SURFACE . . . . . . . .    1.427      0.281       0.157    678    99.3   683     ERRALL 
     BURIED  . . . . . . . .    1.067      0.254       0.157    523    99.1   528     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        47       108       129       152       157     157     157   DISTCA 
CA  (P)     29.94     68.79     82.17     96.82    100.00             157   DISTCA 
CA  (RMS)    0.75      1.15      1.42      2.02      2.28                   DISTCA 
 
ALL (N)       273       731       887      1057      1185    1201    1211   DISTALL 
ALL (P)     22.54     60.36     73.25     87.28     97.85            1211   DISTALL 
ALL (RMS)    0.73      1.22      1.51      2.08      2.97                   DISTALL 
 
 
 
 
END of the results output 
