 
####################################################### 
#                                                     # 
#                        ACE                          # 
#                                                     # 
#        Ab-initio protein structure prediction       # 
#                         &                           # 
#               Comparative modeling                  # 
#                                                     # 
#                     Evaluator                       # 
#                                                     # 
#                ----------------- 11/1998            # 
#                                                     # 
#                         by                          # 
#           Adam Zemla & Ceslovas Venclovas           # 
#                                                     # 
#         Protein Structure Prediction Center         # 
#      Lawrence Livermore National Laboratory, CA     # 
#                                                     # 
####################################################### 
########################## 
#                        # 
#    ACE parameters:     # 
#                        # 
########################## 
# 
# MEASURES: 
# 
# For AB: 0 3 9 13 14 
# For CM: 0 1 2 3 6 7 8 9 10 11 12 13 14 18 
# 
ARMSMC  0 1 2     7 8 9    11 12 13 14 18 
ARMSSC  0 1 2 3 6 7 8 9    11 12 13 14 18 
# 
CRMSCA  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSMC  0 1 2     7 8 9 10 11 12 13 14 18 
CRMSSC  0 1 2 3 6     9    11 12 13 14 18 
CRMSALL 0 1 2     7 8 9    11 12 13 14 18 
# 
D-E_CA  0 1 2     7 8 9    11 12 13 14 18 
D-E_MC  0 1 2     7 8 9    11 12 13 14 18 
D-E_SC  0 1 2 3 6 7 8 9    11 12 13 14 18 
D-E_ALL 0 1 2     7 8 9    11 12 13 14 18 
# 
# Output parameters 
# 
DIHED-OUTPUT        0         #    1 - ON, 0 - OFF 
RES-CONTACTS        0         #    1 - ON, 0 - OFF 
SS-OUTPUT           1         #    1 - ON, 0 - OFF 
PHI-PSI             0         #    1 - SEPARATELY, 0 - NO  
# 
# Calculation parameters 
# 
SOV-METHOD          1         #    0 - SOV 94,  1 - SOV 
# 
TEMP-FACTOR         30.0      #    Target structure temperature factor cutoff 
ACCESS-CUTOFF       0.20      #    Solvent accessibility cutoff   
ANGLES-CORRECT      30.0      #    target-model  (diff < 30.0)    
DSSP-HELIX          6         #    Secondary Structure subset: helix cutoff  
DSSP-STRAND         3         #    Secondary Structure subset: strand cutoff 
ROTAMERS-LIMIT      30.0      #    target-parent (diff > 30.0) 
ROTATION-MATRIX     0         #    1 - ON, 0 - OFF   
SC-SWAPPING         1         #    1 - ON, 0 - OFF    
SEP-CONTACTS        1         #    Separation interval along the chain 
RESIDUE-CONTACTS    8.0       #    Contact definition between two C-beta atoms 
# 
CRMS-METHOD         1         #    0 - ALL, 1 - CA, 2 - MC+CB, 3 - CA (iter)  
ITER-CUTOFF         2.5       #    DISTANCE cutoff (for CA (iter))  
LCS_GDT             1         #    LCS and GDT calculations (1 - ON, 0 - OFF) 
########################## 
#                        # 
#      ACE results:      # 
#                        # 
########################## 
 
 
 
# WARNING! The number of residues in SS section: 155 , MODEL 155 , TARGET 157 
#          The number of residues possible to evaluate: 155 
 
 
 SECONDARY STRUCTURE PREDICTION: 
       NUM    RES   SS   Prediction   Probability 
 SSP     2     E     C     C             1.00 
 SSP     3     L     E     E             1.00 
 SSP     4     V     E     E             1.00 
 SSP     5     S     E     E             1.00 
 SSP     6     V     E     E             1.00 
 SSP     7     A     E     E             1.00 
 SSP     8     A     E     E             1.00 
 SSP     9     L     E     E             1.00 
 SSP    10     A     E     C             1.00 
 SSP    11     E     E     H             1.00 
 SSP    12     N     C     H             1.00 
 SSP    13     R     C     H             1.00 
 SSP    14     V     E     E             1.00 
 SSP    15     I     E     E             1.00 
 SSP    16     G     E     E             1.00 
 SSP    17     R     E     E             1.00 
 SSP    18     D     C     C             1.00 
 SSP    19     G     C     C             1.00 
 SSP    20     E     E     E             1.00 
 SSP    21     L     C     C             1.00 
 SSP    22     P     C     C             1.00 
 SSP    23     W     C     C             1.00 
 SSP    24     P     C     C             1.00 
 SSP    25     S     C     C             1.00 
 SSP    26     I     C     C             1.00 
 SSP    27     P     H     H             1.00 
 SSP    28     A     H     H             1.00 
 SSP    29     D     H     H             1.00 
 SSP    30     K     H     H             1.00 
 SSP    31     K     H     H             1.00 
 SSP    32     Q     H     H             1.00 
 SSP    33     Y     H     H             1.00 
 SSP    34     R     H     H             1.00 
 SSP    35     S     H     H             1.00 
 SSP    36     R     H     C             1.00 
 SSP    37     I     C     C             1.00 
 SSP    38     A     C     C             1.00 
 SSP    39     D     C     C             1.00 
 SSP    40     D     C     C             1.00 
 SSP    41     P     C     E             1.00 
 SSP    42     V     E     E             1.00 
 SSP    43     V     E     E             1.00 
 SSP    44     L     E     E             1.00 
 SSP    45     G     E     E             1.00 
 SSP    46     R     H     H             1.00 
 SSP    47     T     H     H             1.00 
 SSP    48     T     H     H             1.00 
 SSP    49     F     H     H             1.00 
 SSP    50     E     H     H             1.00 
 SSP    51     S     H     H             1.00 
 SSP    52     M     C     C             1.00 
 SSP    53     R     C     C             1.00 
 SSP    54     D     C     C             1.00 
 SSP    55     D     C     C             1.00 
 SSP    56     L     C     C             1.00 
 SSP    57     P     C     C             1.00 
 SSP    58     G     C     C             1.00 
 SSP    59     S     C     C             1.00 
 SSP    60     A     C     E             1.00 
 SSP    61     Q     E     E             1.00 
 SSP    62     I     E     E             1.00 
 SSP    63     V     E     E             1.00 
 SSP    64     M     E     E             1.00 
 SSP    65     S     C     C             1.00 
 SSP    66     R     C     C             1.00 
 SSP    67     S     C     C             1.00 
 SSP    68     E     C     C             1.00 
 SSP    69     R     C     C             1.00 
 SSP    70     S     C     C             1.00 
 SSP    71     F     C     C             1.00 
 SSP    72     S     C     C             1.00 
 SSP    73     V     C     C             1.00 
 SSP    74     D     C     C             1.00 
 SSP    75     T     C     C             1.00 
 SSP    76     A     C     C             1.00 
 SSP    77     H     C     E             1.00 
 SSP    78     R     E     E             1.00 
 SSP    79     A     E     E             1.00 
 SSP    80     A     C     C             1.00 
 SSP    81     S     C     C             1.00 
 SSP    82     V     H     H             1.00 
 SSP    83     E     H     H             1.00 
 SSP    84     E     H     H             1.00 
 SSP    85     A     H     H             1.00 
 SSP    86     V     H     H             1.00 
 SSP    87     D     H     H             1.00 
 SSP    88     I     H     H             1.00 
 SSP    89     A     H     H             1.00 
 SSP    90     A     H     H             1.00 
 SSP    91     S     H     H             1.00 
 SSP    92     L     C     C             1.00 
 SSP    93     D     C     C             1.00 
 SSP    94     A     C     C             1.00 
 SSP    95     E     C     C             1.00 
 SSP    96     T     C     C             1.00 
 SSP    97     A     E     E             1.00 
 SSP    98     Y     E     E             1.00 
 SSP    99     V     E     E             1.00 
 SSP   100     I     E     E             1.00 
 SSP   101     G     E     E             1.00 
 SSP   102     G     C     C             1.00 
 SSP   103     A     H     H             1.00 
 SSP   104     A     H     H             1.00 
 SSP   105     I     H     H             1.00 
 SSP   106     Y     H     H             1.00 
 SSP   107     A     H     H             1.00 
 SSP   108     L     H     H             1.00 
 SSP   109     F     H     H             1.00 
 SSP   110     Q     H     H             1.00 
 SSP   111     P     H     H             1.00 
 SSP   112     H     H     H             1.00 
 SSP   113     L     C     C             1.00 
 SSP   114     D     C     C             1.00 
 SSP   115     R     E     C             1.00 
 SSP   116     M     E     E             1.00 
 SSP   117     V     E     E             1.00 
 SSP   118     L     E     E             1.00 
 SSP   119     S     E     E             1.00 
 SSP   120     R     E     E             1.00 
 SSP   121     V     E     C             1.00 
 SSP   122     P     E     C             1.00 
 SSP   123     G     E     C             1.00 
 SSP   124     E     E     C             1.00 
 SSP   125     Y     C     C             1.00 
 SSP   126     E     C     C             1.00 
 SSP   127     G     C     C             1.00 
 SSP   128     D     C     C             1.00 
 SSP   129     T     E     E             1.00 
 SSP   130     Y     E     E             1.00 
 SSP   131     Y     C     C             1.00 
 SSP   132     P     C     C             1.00 
 SSP   133     E     C     C             1.00 
 SSP   134     W     C     C             1.00 
 SSP   135     D     C     C             1.00 
 SSP   136     A     C     H             1.00 
 SSP   137     A     C     H             1.00 
 SSP   138     E     C     H             1.00 
 SSP   139     W     E     C             1.00 
 SSP   140     E     E     C             1.00 
 SSP   141     L     E     C             1.00 
 SSP   142     D     E     C             1.00 
 SSP   143     A     E     E             1.00 
 SSP   144     E     E     E             1.00 
 SSP   145     T     E     E             1.00 
 SSP   146     D     E     E             1.00 
 SSP   147     H     C     C             1.00 
 SSP   148     E     C     C             1.00 
 SSP   149     G     C     C             1.00 
 SSP   150     F     C     C             1.00 
 SSP   151     T     E     E             1.00 
 SSP   152     L     E     E             1.00 
 SSP   153     Q     E     E             1.00 
 SSP   154     E     E     E             1.00 
 SSP   155     W     E     E             1.00 
 SSP   156     V     E     C             1.00 
 SSP  BREAK 
 
 NP      - Number of predicted residues 
 PP      - Percent of predicted residues 
 Q3      - Residues predicted correctly (H, E, C) 
 Qhelix  - Residues predicted correctly (HELIX) 
 Qstrand - Residues predicted correctly (STRAND) 
 Qcoil   - Residues predicted correctly (COIL) 
 SOV     - Segment overlap quantity 
 
                     Q3      Qhelix   Qstrand   Qcoil      PP 
 Qindex              86.5      97.2     78.2     87.5     98.7 
 
                     ALL      HELIX    STRAND    COIL      PP 
 SOV observed        94.2     100.0     90.9     93.8     98.7 
 
           Considered    Percent predicted   Percent predicted 
            segments        correctly         as wrong type 
 SEG           14              99.1               0.9 
 
         Number of wrong    Number of wrong 
             breaks             joins 
 B/J            0                 0 
 
  CONFIDENCE (P)     Average     NP    PP/BIN     Q3 
 BIN  0.90 - 1.00      1.00     155    100.0     86.5 
 
 BIN  0.00 - 1.00      1.00     155    100.0     86.5 
 
 
 
 
              predicted        number of target      total number   total number 
                as a         contacts possible in         of             of 
               contact         predicted subset:       contacts       contacts 
            percent  number    percent    number       in target    in prediction 
 CONTACTS:     0.0      0         0.0        0             0              0 
 
 
 
 CONSIDERED - explicitly provided contacts (with positive confidence) or 
              non contacts (with negative confidence) possible to evaluate 
 SEP      - Minimum separation between residues considered 
 NPC      - Number of contacts predicted correctly 
 PC(P)    - Percent of contacts predicted correctly from CONSIDERED in PREDICTION 
 PC(T)    - Percent of contacts predicted correctly from CONSIDERED in TARGET with SEP limit 
 PC(TT)   - Percent of contacts predicted correctly from TOTAL in TARGET with SEP limit 
 
                        CONSIDERED     CONSIDERED       TOTAL          TOTAL 
                      in PREDICTION    in TARGET    in PREDICTION    in TARGET 
 ALL RESIDUES USED         152             152           156            154 
 ALL CONTACTS (< 8.0A)     696             709           710            720 
 
               in PREDICTION      Predicted correctly          Submitted as        in TARGET 
                CONSIDERED     NPC   PC(P)   PC(T)   PC(TT)    NOT  predicted   CONSIDERED  TOTAL  |   SEP 
 RES CONTACTS       696        616   88.51   86.88   85.56       0     0.00         709       720  |   1-9999 
 RES CONTACTS       365        343   93.97   95.54   94.75       0     0.00         359       362  |   1-4    
 RES CONTACTS        38         27   71.05   77.14   77.14       0     0.00          35        35  |   5-8    
 RES CONTACTS       293        246   83.96   78.10   76.16       0     0.00         315       323  |   9-9999 
 
 
 
# WARNING! TARGET 1211 atoms, MODEL 1264 atoms, 1209 common with TARGET 
           Number of atoms possible to evaluate: 1192 
 
MEASURES: 
 
 
ANGLES RMS : model <-> target 
 
 (MC: PHI+PSI) DIHED RMS:      ARMSMC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    47.56           76.6   308    98.7   312     ARMSMC  
     SECONDARY STRUCTURE . .    19.44           90.1   171    98.3   174     ARMSMC  
     SURFACE . . . . . . . .    52.82           72.7   172    97.7   176     ARMSMC  
     BURIED  . . . . . . . .    39.93           81.6   136   100.0   136     ARMSMC  
 (SC: CHI1) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    70.10           55.3   123    98.4   125     ARMSSC1 
     RELIABLE SIDE CHAINS  .    71.36           52.7   110    98.2   112     ARMSSC1 
     SECONDARY STRUCTURE . .    64.62           58.0    69    98.6    70     ARMSSC1 
     SURFACE . . . . . . . .    72.53           51.4    70    97.2    72     ARMSSC1 
     BURIED  . . . . . . . .    66.75           60.4    53   100.0    53     ARMSSC1 
 (SC: CHI2) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    72.62           45.6    90    97.8    92     ARMSSC2 
     RELIABLE SIDE CHAINS  .    67.08           46.1    76    98.7    77     ARMSSC2 
     SECONDARY STRUCTURE . .    78.68           50.0    48    98.0    49     ARMSSC2 
     SURFACE . . . . . . . .    80.01           34.0    53    96.4    55     ARMSSC2 
     BURIED  . . . . . . . .    60.50           62.2    37   100.0    37     ARMSSC2 
 (SC: CHI3) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .    66.63           18.8    32    97.0    33     ARMSSC3 
     RELIABLE SIDE CHAINS  .    64.15           21.4    28    96.6    29     ARMSSC3 
     SECONDARY STRUCTURE . .    70.91           15.0    20    95.2    21     ARMSSC3 
     SURFACE . . . . . . . .    67.04           25.0    24    96.0    25     ARMSSC3 
     BURIED  . . . . . . . .    65.39            0.0     8   100.0     8     ARMSSC3 
 (SC: CHI4) DIHED RMS:         ARMSSC            PC     NP     PP     TN 
     ALL . . . . . . . . . .   100.93           16.7    12    92.3    13     ARMSSC4 
     RELIABLE SIDE CHAINS  .   100.93           16.7    12    92.3    13     ARMSSC4 
     SECONDARY STRUCTURE . .    99.30           12.5     8    88.9     9     ARMSSC4 
     SURFACE . . . . . . . .   107.43           20.0    10    90.9    11     ARMSSC4 
     BURIED  . . . . . . . .    58.41            0.0     2   100.0     2     ARMSSC4 
 
COORDINATES RMS : model <-> target 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   5.00): 
 FRAGMENT  1    2 - 156  155  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   155      2 - 156      1.97     1.97 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   2.00): 
 FRAGMENT  1    2 - 156  155  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT   155      2 - 156      1.97     1.97 
  LCS LOCAL_SCORE:            100.00 
 
 
LONGEST_CONTINUOUS_SEGMENT (Longest continuous sequence under CA RMS cutoff   1.00): 
 FRAGMENT  1    2 - 156  155  Length     Seq        L_RMS   ALL_CA_RMS 
  LONGEST_CONTINUOUS_SEGMENT    51     96 - 146      0.96     2.17 
  LCS LOCAL_SCORE:             22.51 
 
 
 LCS                   LENGTH_OF_THE 
 LCS  RESIDUE  RESIDUE    CONTINUOUS  SECONDARY 
 LCS   NUMBER     NAME       SEGMENT  STRUCTURE   GDT_DATA_COLUMNS (PERCENT OF THE TARGET) 
 LCS       2       E    45  155  155       C       15  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS       3       L    45  155  155       E       15  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS       4       V    45  155  155       E        7  45  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS       5       S    45  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS       6       V    45  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS       7       A    45  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS       8       A    45  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS       9       L    45  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      10       A    45  155  155       E       16  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      11       E    45  155  155       E       15  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      12       N    45  155  155       C       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      13       R    45  155  155       C       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      14       V    45  155  155       E       20  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      15       I    45  155  155       E       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      16       G    45  155  155       E       16  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      17       R    45  155  155       E       16  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      18       D    45  155  155       C       10  41  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      19       G    45  155  155       C       15  48  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      20       E    45  155  155       E       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      21       L    45  155  155       C       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      22       P    45  155  155       C        8  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      23       W    45  155  155       C       14  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      24       P    45  155  155       C       14  48  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      25       S    45  155  155       C        1  31  56  71  81  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      26       I    45  155  155       C       14  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      27       P    45  155  155       H       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      28       A    45  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      29       D    45  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      30       K    45  155  155       H       18  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      31       K    45  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      32       Q    45  155  155       H        7  46  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      33       Y    45  155  155       H       14  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      34       R    45  155  155       H       16  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      35       S    45  155  155       H       11  34  66  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      36       R    45  155  155       H        7  43  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      37       I    45  155  155       C       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      38       A    45  155  155       C       16  48  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      39       D    45  155  155       C       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      40       D    45  155  155       C       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      41       P    45  155  155       C       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      42       V    45  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      43       V    45  155  155       E       14  48  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      44       L    45  155  155       E       17  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      45       G    45  155  155       E       16  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      46       R    45  155  155       H       12  40  66  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      47       T    23  155  155       H       12  27  58  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      48       T    23  155  155       H       12  27  58  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      49       F    23  155  155       H       12  28  60  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      50       E    21  155  155       H       12  27  54  74  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      51       S    21  155  155       H       12  27  48  67  85  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      52       M    21  155  155       C       11  27  56  75  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      53       R    20  155  155       C        1   3  30  40  70  86  90  92  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      54       D     5  155  155       C        1   3   3   3  64  80  91  92  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      55       D     5  155  155       C        5  13  22  50  64  78  84  91  94  97  98  98  98  98  98  98  98  98  98  98  
 LCS      56       L     5  155  155       C        7  42  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      57       P     5  155  155       C        1   3   3   3  12  34  77  89  92  96  98  98  98  98  98  98  98  98  98  98  
 LCS      58       G     5  155  155       C        1   2   3   4  24  54  85  91  94  97  98  98  98  98  98  98  98  98  98  98  
 LCS      59       S    11  155  155       C        7  26  61  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      60       A    11  155  155       C       12  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      61       Q    11  155  155       E       10  44  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      62       I    11  155  155       E       14  38  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      63       V    11  155  155       E       14  43  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      64       M    11  155  155       E       13  48  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      65       S    11  155  155       C       14  45  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      66       R    11  155  155       C       13  43  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      67       S    11  155  155       C       12  33  64  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      68       E    11  155  155       C        3  27  57  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      69       R    11  155  155       C        0  40  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      70       S     4  155  155       C        0   1  13  36  55  82  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      71       F     4  155  155       C        1   1   5  10  33  52  75  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      72       S     6  155  155       C        1   7  14  29  40  75  85  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      73       V     6  155  155       C        1   7  14  29  40  75  89  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      74       D     6  155  155       C        2   7  16  40  56  74  89  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      75       T    12  155  155       C        1  16  31  56  75  87  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      76       A    16  155  155       C       14  33  64  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      77       H    17  155  155       C       14  37  66  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      78       R    17  155  155       E       12  26  57  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      79       A    17  155  155       E       10  29  57  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      80       A    17  155  155       C        8  29  56  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      81       S    17  155  155       C        8  26  54  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      82       V    17  155  155       H        7  27  56  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      83       E    17  155  155       H        7  29  63  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      84       E    17  155  155       H       14  29  64  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      85       A    17  155  155       H       13  48  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      86       V    17  155  155       H        7  38  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      87       D    17  155  155       H        7  39  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      88       I    17  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      89       A    17  155  155       H       11  48  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      90       A    17  155  155       H        7  35  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      91       S    17  155  155       H       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      92       L    17  155  155       C       12  44  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      93       D    17  155  155       C        3  35  66  77  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      94       A    28  155  155       C        1   1   1  65  77  88  91  92  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      95       E    31  155  155       C        1  14  31  57  80  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      96       T    51  155  155       C       16  46  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      97       A    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      98       Y    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS      99       V    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     100       I    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     101       G    51  155  155       E       12  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     102       G    51  155  155       C       14  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     103       A    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     104       A    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     105       I    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     106       Y    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     107       A    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     108       L    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     109       F    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     110       Q    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     111       P    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     112       H    51  155  155       H       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     113       L    51  155  155       C       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     114       D    51  155  155       C       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     115       R    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     116       M    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     117       V    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     118       L    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     119       S    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     120       R    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     121       V    51  155  155       E        8  47  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     122       P    51  155  155       E        3  47  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     123       G    51  155  155       E       16  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     124       E    51  155  155       E        8  47  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     125       Y    51  155  155       C        8  40  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     126       E    51  155  155       C       10  40  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     127       G    51  155  155       C       10  40  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     128       D    51  155  155       C        9  43  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     129       T    51  155  155       E       17  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     130       Y    51  155  155       E       17  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     131       Y    51  155  155       C        9  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     132       P    51  155  155       C        7  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     133       E    51  155  155       C       10  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     134       W    51  155  155       C       22  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     135       D    51  155  155       C       15  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     136       A    51  155  155       C        3  14  64  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     137       A    51  155  155       C        3  18  64  76  85  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     138       E    51  155  155       C        5  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     139       W    51  155  155       E       15  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     140       E    51  155  155       E       17  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     141       L    51  155  155       E       17  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     142       D    51  155  155       E       12  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     143       A    51  155  155       E       15  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     144       E    51  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     145       T    51  155  155       E       12  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     146       D    51  155  155       E        5  39  63  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     147       H    10  155  155       C        3  17  46  75  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     148       E     8  155  155       C        2   3   8  33  61  81  87  92  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     149       G     8  155  155       C        2   8  33  64  82  88  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     150       F     8  155  155       C       11  46  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     151       T     8  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     152       L     8  155  155       E       23  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     153       Q     8  155  155       E       16  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     154       E     8  155  155       E       15  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     155       W     8  155  155       E       21  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS     156       V     8  155  155       E       15  49  68  78  86  89  91  94  96  97  98  98  98  98  98  98  98  98  98  98  
 LCS TOTAL_SCORE (RMS CUTOFF   1.00):  21.94 
 
 NUMBER_OF_CA_Tg:  157      NUMBER_OF_CA_Pr:  155      PERCENT_OF_CA:  98.73  
 
GLOBAL_DISTANCE_TEST (the largest set of residues under DISTANCE_CUTOFF (using LCS results)): 
 GDT DISTANCE_CUTOFF     0.50    1.00    1.50    2.00    2.50    3.00    3.50    4.00    4.50    5.00    5.50    6.00    6.50    7.00    7.50    8.00    8.50    9.00    9.50   10.00  
 GDT NUMBER_OF_CA_max      37      78     108     124     136     140     144     148     152     153     155     155     155     155     155     155     155     155     155     155  
 GDT PERCENT_OF_CA_Pr   23.87   50.32   69.68   80.00   87.74   90.32   92.90   95.48   98.06   98.71  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00  100.00 
 GDT PERCENT_OF_CA_Tg   23.57   49.68   68.79   78.98   86.62   89.17   91.72   94.27   96.82   97.45   98.73   98.73   98.73   98.73   98.73   98.73   98.73   98.73   98.73   98.73 
 GDT FRAGMENT: Beg-End   5-152   2-153   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156   2-156 
 GDT RMS_LOCAL           0.36    0.68    0.92    1.11    1.27    1.35    1.50    1.74    1.86    1.89    1.97    1.97    1.97    1.97    1.97    1.97    1.97    1.97    1.97    1.97 
 GDT RMS_ALL_CA          2.12    2.19    2.08    2.03    2.02    2.01    1.98    1.97    1.97    1.97    1.97    1.97    1.97    1.97    1.97    1.97    1.97    1.97    1.97    1.97 
 
 
 TEST (CA)  RMS =   1.97               (Number of atoms:  155) 
 
 (CA)  RMS:                   CRMSCA         NP     PP     TN 
     ALL . . . . . . . . . .    1.97        155    98.7   157     CRMSCA  
     CRN = ALL/NP  . . . . .    0.0127                            CRMSCA  
     SECONDARY STRUCTURE . .    1.16         86    98.9    87     CRMSCA  
     SURFACE . . . . . . . .    2.29         87    97.8    89     CRMSCA  
     BURIED  . . . . . . . .    1.47         68   100.0    68     CRMSCA  
 (MC)  RMS:                   CRMSMC         NP     PP     TN 
     ALL . . . . . . . . . .    2.04        763    98.7   773     CRMSMC  
     SECONDARY STRUCTURE . .    1.21        426    98.8   431     CRMSMC  
     SURFACE . . . . . . . .    2.40        429    97.7   439     CRMSMC  
     BURIED  . . . . . . . .    1.46        334   100.0   334     CRMSMC  
 (SC)  RMS:                   CRMSSC         NP     PP     TN 
     ALL . . . . . . . . . .    3.23        572    98.1   583     CRMSSC  
     RELIABLE SIDE CHAINS  .    3.27        504    98.2   513     CRMSSC  
     SECONDARY STRUCTURE . .    2.17        321    97.9   328     CRMSSC  
     SURFACE . . . . . . . .    3.69        316    96.6   327     CRMSSC  
     BURIED  . . . . . . . .    2.56        256   100.0   256     CRMSSC  
 (ALL) RMS:                   CRMSALL        NP     PP     TN 
     ALL . . . . . . . . . .    2.64       1192    98.4  1211     CRMSALL 
     SECONDARY STRUCTURE . .    1.73        665    98.4   676     CRMSALL 
     SURFACE . . . . . . . .    3.03        664    97.2   683     CRMSALL 
     BURIED  . . . . . . . .    2.06        528   100.0   528     CRMSALL 
 
Accuracy of estimates of atomic coordinate errors: model <-> target 
 
 (CA)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.180      0.368       0.324    155    98.7   157     ERRCA  
     SECONDARY STRUCTURE . .    0.814      0.313       0.340     86    98.9    87     ERRCA  
     SURFACE . . . . . . . .    1.263      0.346       0.273     87    97.8    89     ERRCA  
     BURIED  . . . . . . . .    1.074      0.397       0.390     68   100.0    68     ERRCA  
 (MC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.194      0.365       0.319    763    98.7   773     ERRMC  
     SECONDARY STRUCTURE . .    0.803      0.306       0.326    426    98.8   431     ERRMC  
     SURFACE . . . . . . . .    1.324      0.352       0.280    429    97.7   439     ERRMC  
     BURIED  . . . . . . . .    1.028      0.382       0.368    334   100.0   334     ERRMC  
 (SC)  ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.643      0.339       0.281    572    98.1   583     ERRSC  
     RELIABLE SIDE CHAINS  .    1.684      0.343       0.288    504    98.2   513     ERRSC  
     SECONDARY STRUCTURE . .    1.020      0.275       0.270    321    97.9   328     ERRSC  
     SURFACE . . . . . . . .    1.886      0.334       0.254    316    96.6   327     ERRSC  
     BURIED  . . . . . . . .    1.344      0.345       0.314    256   100.0   256     ERRSC  
 (ALL) ERRORS:                  |D-E|   |D-E|/|D+E|   SR(D,E)    NP     PP     TN 
     ALL . . . . . . . . . .    1.394      0.353       0.303   1192    98.4  1211     ERRALL 
     SECONDARY STRUCTURE . .    0.913      0.294       0.304    665    98.4   676     ERRALL 
     SURFACE . . . . . . . .    1.560      0.342       0.268    664    97.2   683     ERRALL 
     BURIED  . . . . . . . .    1.185      0.367       0.346    528   100.0   528     ERRALL 
 
 
 
DISTANCES: Percent of total atoms where distance (target <-> model) in global 
           superposition is less than: 1 , 2 , 3 , 5 , 10 Angstroms 
            D < 1     D < 2     D < 3     D < 5    D < 10      NP      TN 
CA  (N)        60       120       139       148       155     155     157   DISTCA 
CA  (P)     38.22     76.43     88.54     94.27     98.73             157   DISTCA 
CA  (RMS)    0.68      1.14      1.37      1.65      1.97                   DISTCA 
 
ALL (N)       377       810       989      1101      1184    1192    1211   DISTALL 
ALL (P)     31.13     66.89     81.67     90.92     97.77            1211   DISTALL 
ALL (RMS)    0.70      1.18      1.48      1.87      2.49                   DISTALL 
 
 
 
 
END of the results output 
