

PFRMAT ABF1
TARGET T0020
AUTHOR 6792-8330-8583 D.Gerloff & F.Cohen, UCSF, gerloff@cgl.ucsf.edu
AUTHOR 9774-5781-2699 S.Benner, UF and ETH, benner@chem.ethz.ch
REMARK (This prediction results from collaboration between the two groups Benner&Cohen.)
REMARK Secondary structure was predicted according to Benner & Gerloff REMARK Probabilities for the three-state secondary structure prediction reflect
REMARK (a) center or ending positions in a predicted sec.str. element,
REMARK (b) possible sec.str. alternatives
REMARK Due to lack of time, this secondary structure is predicted first
REMARK followed by a supersecondary structure suggestion in a few minutes
REMARK (no computer modeling, only an educated guess... computer trouble!
BEGDAT 1.1  1  1.00 
SS 310
M C  0.00
S C  0.00
R C  0.00
K C  0.00
K H  0.50
M H  0.60
G H  0.60
L H  0.60
L H  0.60
V H  0.60
M H  0.60
A H  0.60
Y H  0.60
G H  0.60
T C  0.40
P C  1.00
Y C  1.00
K H  0.70
E H  1.00
E H  1.00
D H  1.00
I H  1.00
E H  1.00
R H  1.00
Y H  1.00
Y H  1.00
T H  1.00
H H  1.00
I H  1.00
R H  0.70
R H  0.70
G C  0.60
R C  0.60
K C  0.80
P C  0.80
E C  0.80
P C  0.80
E H  0.50
M H  0.50
L H  0.50
Q H  0.50
D H  0.50
L H  1.00
K H  1.00
D H  1.00
R H  1.00
Y H  0.80
E H  0.70
A H  0.70
I H  0.70
G H  0.50
G C  0.90
I C  1.00
S C  1.00
P H  0.60
L H  1.00
A H  1.00
Q H  1.00
I H  1.00
T H  1.00
E H  1.00
Q H  1.00
Q H  1.00
A H  1.00
H H  1.00
N H  1.00
L H  1.00
E H  1.00
Q H  1.00
H H  1.00
L H  1.00
N H  1.00
E H  1.00
I H  1.00
Q C  0.60
D C  0.80
E C  0.80
I C  0.80
T C  0.80
F C  0.50
K E  0.60
A E  0.60
Y E  0.60
I E  0.60
G E  0.60
L E  0.60
K C  0.60
H C  0.60
I C  1.00
E C  1.00
P C  0.90
F H  0.50
I H  1.00
E H  1.00
D H  1.00
A H  1.00
V H  1.00
A H  1.00
E H  1.00
M H  1.00
H H  1.00
K H  1.00
D H  0.60
G C  0.60
I C  0.40
T C  0.40
E C  0.40
A E  0.50
V E  0.60
S E  0.60
I E  0.60
V C  0.50
L C  0.50
A C  0.50
P C  0.50
H C  0.50
F C  0.50
S C  0.50
T C  0.50
F C  0.50
S C  0.50
V C  0.50
Q C  0.60
S C  0.60
Y C  0.60
N C  0.70
K C  0.70
R H  1.00
A H  1.00
K H  1.00
E H  1.00
E H  1.00
A H  1.00
E H  0.90
K H  0.90
L H  0.60
G C  0.80
G C  0.80
L C  0.60
T C  0.50
I E  0.60
T E  0.60
S E  0.60
V E  0.60
E E  0.60
S E  0.60
W E  0.60
Y C  0.60
D C  0.60
E C  0.50
P H  0.60
K H  1.00
F H  1.00
V H  1.00
T H  1.00
Y H  1.00
W H  1.00
V H  1.00
D H  1.00
R H  1.00
V H  1.00
K H  1.00
E H  1.00
T C  0.70
Y C  0.70
A C  0.70
S C  0.70
M C  0.70
P C  1.00
E C  1.00
D C  1.00
E C  1.00
R C  1.00
E C  1.00
N C  1.00
A C  0.50
M E  0.50
L E  0.50
I E  0.50
V E  0.50
S C  0.50
A C  0.50
H C  0.50
S C  0.50
L C  0.50
P C  1.00
E C  0.50
K C  0.50
I C  0.50
K C  0.50
E C  1.00
F C  1.00
G C  1.00
D C  1.00
P C  1.00
Y C  1.00
P C  0.60
D H  1.00
Q H  1.00
L H  1.00
H H  1.00
E H  1.00
S H  1.00
A H  1.00
K H  1.00
L H  1.00
I H  1.00
A H  1.00
E H  1.00
G H  1.00
A H  1.00
G H  1.00
V C  0.50
S C  0.70
E C  0.70
Y E  0.70
A E  0.70
V E  0.70
G E  0.70
W E  0.70
Q C  0.50
S C  0.50
E C  0.50
G C  0.50
N C  0.50
T C  0.80
P C  0.80
D C  0.80
P C  0.60
W C  0.50
L C  0.50
G C  0.80
P C  0.50
D H  1.00
V H  1.00
Q H  1.00
D H  1.00
L H  1.00
T H  1.00
R H  1.00
D H  1.00
L H  1.00
F H  1.00
E C  0.50
Q C  0.90
K C  0.90
G C  0.90
Y C  0.90
Q C  0.90
A C  0.50
F E  0.80
V E  0.80
Y E  0.80
V E  0.80
P C  0.80
V C  0.80
G C  0.60
F H  0.80
V H  1.00
A H  1.00
D H  1.00
H H  1.00
L H  1.00
E H  1.00
V H  1.00
L H  1.00
Y H  1.00
D H  1.00
N H  1.00
D H  0.60
Y C  1.00
E C  0.40
C C  1.00
K C  1.00
V C  0.60
V H  0.60
T H  0.60
D H  0.60
D H  0.60
I H  0.60
G H  0.70
A H  0.70
S H  0.70
Y H  0.70
Y H  0.70
R H  0.70
P H  0.50
E C  1.00
M C  1.00
P C  1.00
N C  1.00
A C  1.00
K C  1.00
P H  0.50
E H  1.00
F H  1.00
I H  1.00
D H  1.00
A H  1.00
L H  1.00
A H  1.00
T H  1.00
V H  1.00
V H  1.00
L H  0.70
K H  0.70
K C  0.00
L C  0.00
G C  0.00
R C  0.00
ENDDAT 1.1
END
