PFRMAT ABF1
TARGET T0008
AUTHOR 7051-9610-4897 Maxim Totrov, Ruben Abagyan
AUTHOR 7051-9610-4897 The Skirball Institute, NYU Medical Center
BEGDAT 3.1  1  1.0
REMARK  This model of csvl was built with the ICM program 
REMARK  by global optimization of side-chains. 
REMARK              Sequence alignment methods
REMARK  PROGRAM ICM 2.5 (Molsoft, LLC, 1994) 
REMARK  SCORING_MATRIX blosum45
REMARK  GAP_PENALTY 2.8 GAP_EXTENSION 0.15
REMARK                  Core choice methods
REMARK  Core regions were built by the ICM regularization procedure
REMARK  [Abagyan,Totrov,Kuznetsov (1994),  J.Comp.Chem. 15, 488-506]
REMARK                 Side chain building methods
REMARK  The Biased Probability Monte Carlo procedure was used to predict
REMARK  side-chains [Abagyan&Totrov, 1994, JMB, 235, 983-1002].
REMARK  Rotamers assigned from a library depending on residue type 
REMARK  Local energy minimization of full-atom models
REMARK  in the internal coordinate space. Both conjugate gradients and
REMARK  a quasi-Newton algorithms are used for minimization.
REMARK  [Abagyan,Totrov,Kuznetsov (1994),  J.Comp.Chem. 15, 488-506]
REMARK              Error assessment method:
REMARK  analysis of energetic strain [unpublished]
REMARK  Cavities are analyzied with ICM molecular surface 
REMARK  [Totrov&Abagyan,(1996),JSB,116,138-143]
REMARK  Binding energy was evaluated with ICM
ATOM    214  CA  VAL     1      30.181  14.720  19.632  1.00  1.00              
ATOM    215  CB  VAL     1      31.249  13.756  20.154  1.00  1.00              
ATOM    216  CG1 VAL     1      31.427  12.569  19.205  1.00  1.00              
ATOM    217  CG2 VAL     1      32.577  14.480  20.381  1.00  1.00              
ATOM    218  C   VAL     1      28.908  14.008  19.172  1.00  1.00              
ATOM    219  O   VAL     1      28.709  13.795  17.977  1.00  1.00              
ATOM    220  N   GLU     2      28.078  13.661  20.144  1.00  1.00              
ATOM    221  CA  GLU     2      26.816  13.002  19.852  1.00  1.00              
ATOM    222  CB  GLU     2      26.092  12.607  21.141  1.00  1.00              
ATOM    223  CG  GLU     2      26.954  11.671  21.990  1.00  1.00              
ATOM    224  CD  GLU     2      27.701  12.448  23.076  1.00  1.00              
ATOM    225  OE1 GLU     2      27.363  12.235  24.260  1.00  1.00              
ATOM    226  OE2 GLU     2      28.594  13.237  22.697  1.00  1.00              
ATOM    227  C   GLU     2      25.936  13.902  18.982  1.00  1.00              
ATOM    228  O   GLU     2      25.313  13.434  18.030  1.00  1.00              
ATOM    229  N   ALA     3      25.913  15.177  19.340  1.00  1.00              
ATOM    230  CA  ALA     3      25.060  16.132  18.654  1.00  1.00              
ATOM    231  CB  ALA     3      25.070  17.462  19.410  1.00  1.00              
ATOM    232  C   ALA     3      25.531  16.282  17.206  1.00  1.00              
ATOM    233  O   ALA     3      24.721  16.259  16.280  1.00  1.00              
ATOM    234  N   LEU     4      26.839  16.431  17.055  1.00  1.00              
ATOM    235  CA  LEU     4      27.422  16.630  15.739  1.00  1.00              
ATOM    236  CB  LEU     4      28.901  17.002  15.860  1.00  1.00              
ATOM    237  CG  LEU     4      29.200  18.385  16.441  1.00  1.00              
ATOM    238  CD1 LEU     4      30.620  18.447  17.008  1.00  1.00              
ATOM    239  CD2 LEU     4      28.949  19.482  15.403  1.00  1.00              
ATOM    240  C   LEU     4      27.168  15.390  14.880  1.00  1.00              
ATOM    241  O   LEU     4      26.765  15.504  13.723  1.00  1.00              
ATOM    242  N   GLU     5      27.414  14.234  15.478  1.00  1.00              
ATOM    243  CA  GLU     5      27.220  12.974  14.781  1.00  1.00              
ATOM    244  CB  GLU     5      27.652  11.793  15.652  1.00  1.00              
ATOM    245  CG  GLU     5      27.574  10.479  14.873  1.00  1.00              
ATOM    246  CD  GLU     5      28.183   9.328  15.676  1.00  1.00              
ATOM    247  OE1 GLU     5      28.043   9.366  16.917  1.00  1.00              
ATOM    248  OE2 GLU     5      28.775   8.436  15.030  1.00  1.00              
ATOM    249  C   GLU     5      25.761  12.828  14.344  1.00  1.00              
ATOM    250  O   GLU     5      25.485  12.392  13.227  1.00  1.00              
ATOM    251  N   LYS     6      24.866  13.201  15.247  1.00  1.00              
ATOM    252  CA  LYS     6      23.443  13.129  14.964  1.00  1.00              
ATOM    253  CB  LYS     6      22.630  13.452  16.219  1.00  1.00              
ATOM    254  CG  LYS     6      21.129  13.346  15.943  1.00  1.00              
ATOM    255  CD  LYS     6      20.325  13.422  17.243  1.00  1.00              
ATOM    256  CE  LYS     6      20.373  14.832  17.835  1.00  1.00              
ATOM    257  NZ  LYS     6      19.436  14.947  18.975  1.00  1.00              
ATOM    258  C   LYS     6      23.118  14.030  13.771  1.00  1.00              
ATOM    259  O   LYS     6      22.363  13.641  12.882  1.00  1.00              
ATOM    260  N   LYS     7      23.704  15.218  13.792  1.00  1.00              
ATOM    261  CA  LYS     7      23.454  16.194  12.745  1.00  1.00              
ATOM    262  CB  LYS     7      24.074  17.544  13.111  1.00  1.00              
ATOM    263  CG  LYS     7      23.695  18.617  12.088  1.00  1.00              
ATOM    264  CD  LYS     7      24.214  19.991  12.517  1.00  1.00              
ATOM    265  CE  LYS     7      23.870  21.057  11.475  1.00  1.00              
ATOM    266  NZ  LYS     7      24.410  22.373  11.882  1.00  1.00              
ATOM    267  C   LYS     7      23.941  15.636  11.406  1.00  1.00              
ATOM    268  O   LYS     7      23.246  15.738  10.397  1.00  1.00              
ATOM    269  N   VAL     8      25.133  15.058  11.441  1.00  1.00              
ATOM    270  CA  VAL     8      25.716  14.471  10.246  1.00  1.00              
ATOM    271  CB  VAL     8      27.101  13.904  10.564  1.00  1.00              
ATOM    272  CG1 VAL     8      27.541  12.902   9.495  1.00  1.00              
ATOM    273  CG2 VAL     8      28.130  15.026  10.721  1.00  1.00              
ATOM    274  C   VAL     8      24.757  13.424   9.678  1.00  1.00              
ATOM    275  O   VAL     8      24.463  13.429   8.483  1.00  1.00              
ATOM    276  N   ALA     9      24.296  12.549  10.560  1.00  1.00              
ATOM    277  CA  ALA     9      23.430  11.457  10.149  1.00  1.00              
ATOM    278  CB  ALA     9      23.162  10.540  11.344  1.00  1.00              
ATOM    279  C   ALA     9      22.142  12.029   9.553  1.00  1.00              
ATOM    280  O   ALA     9      21.669  11.559   8.520  1.00  1.00              
ATOM    281  N   ALA    10      21.611  13.037  10.231  1.00  1.00              
ATOM    282  CA  ALA    10      20.347  13.628   9.825  1.00  1.00              
ATOM    283  CB  ALA    10      19.939  14.703  10.834  1.00  1.00              
ATOM    284  C   ALA    10      20.480  14.182   8.405  1.00  1.00              
ATOM    285  O   ALA    10      19.619  13.945   7.560  1.00  1.00              
ATOM    286  N   LEU    11      21.567  14.908   8.187  1.00  1.00              
ATOM    287  CA  LEU    11      21.814  15.513   6.889  1.00  1.00              
ATOM    288  CB  LEU    11      22.992  16.486   6.967  1.00  1.00              
ATOM    289  CG  LEU    11      22.781  17.727   7.836  1.00  1.00              
ATOM    290  CD1 LEU    11      24.119  18.348   8.240  1.00  1.00              
ATOM    291  CD2 LEU    11      21.868  18.736   7.138  1.00  1.00              
ATOM    292  C   LEU    11      21.996  14.410   5.844  1.00  1.00              
ATOM    293  O   LEU    11      21.449  14.494   4.746  1.00  1.00              
ATOM    294  N   GLU    12      22.767  13.401   6.223  1.00  1.00              
ATOM    295  CA  GLU    12      23.133  12.348   5.291  1.00  1.00              
ATOM    296  CB  GLU    12      24.039  11.313   5.961  1.00  1.00              
ATOM    297  CG  GLU    12      24.563  10.300   4.941  1.00  1.00              
ATOM    298  CD  GLU    12      25.588   9.361   5.579  1.00  1.00              
ATOM    299  OE1 GLU    12      26.795   9.646   5.420  1.00  1.00              
ATOM    300  OE2 GLU    12      25.143   8.378   6.210  1.00  1.00              
ATOM    301  C   GLU    12      21.879  11.689   4.715  1.00  1.00              
ATOM    302  O   GLU    12      21.796  11.450   3.511  1.00  1.00              
ATOM    303  N   SER    13      20.934  11.412   5.602  1.00  1.00              
ATOM    304  CA  SER    13      19.681  10.801   5.194  1.00  1.00              
ATOM    305  CB  SER    13      18.804  10.481   6.406  1.00  1.00              
ATOM    306  OG  SER    13      18.209  11.652   6.958  1.00  1.00              
ATOM    307  C   SER    13      18.936  11.726   4.229  1.00  1.00              
ATOM    308  O   SER    13      18.344  11.265   3.255  1.00  1.00              
ATOM    309  N   LYS    14      18.991  13.014   4.535  1.00  1.00              
ATOM    310  CA  LYS    14      18.272  14.001   3.747  1.00  1.00              
ATOM    311  CB  LYS    14      18.233  15.345   4.478  1.00  1.00              
ATOM    312  CG  LYS    14      17.196  16.279   3.852  1.00  1.00              
ATOM    313  CD  LYS    14      17.182  17.635   4.561  1.00  1.00              
ATOM    314  CE  LYS    14      16.220  18.605   3.871  1.00  1.00              
ATOM    315  NZ  LYS    14      16.289  19.941   4.502  1.00  1.00              
ATOM    316  C   LYS    14      18.888  14.079   2.349  1.00  1.00              
ATOM    317  O   LYS    14      18.171  14.204   1.357  1.00  1.00              
ATOM    318  N   VAL    15      20.210  14.002   2.314  1.00  1.00              
ATOM    319  CA  VAL    15      20.928  14.019   1.051  1.00  1.00              
ATOM    320  CB  VAL    15      22.436  14.002   1.307  1.00  1.00              
ATOM    321  CG1 VAL    15      23.202  13.610   0.041  1.00  1.00              
ATOM    322  CG2 VAL    15      22.917  15.353   1.842  1.00  1.00              
ATOM    323  C   VAL    15      20.455  12.851   0.185  1.00  1.00              
ATOM    324  O   VAL    15      20.185  13.023  -1.003  1.00  1.00              
ATOM    325  N   GLN    16      20.370  11.687   0.812  1.00  1.00              
ATOM    326  CA  GLN    16      19.991  10.479   0.099  1.00  1.00              
ATOM    327  CB  GLN    16      20.109   9.249   1.003  1.00  1.00              
ATOM    328  CG  GLN    16      19.790   7.968   0.230  1.00  1.00              
ATOM    329  CD  GLN    16      20.755   7.780  -0.943  1.00  1.00              
ATOM    330  OE1 GLN    16      21.878   7.330  -0.790  1.00  1.00              
ATOM    331  NE2 GLN    16      20.256   8.150  -2.119  1.00  1.00              
ATOM    332  C   GLN    16      18.572  10.614  -0.458  1.00  1.00              
ATOM    333  O   GLN    16      18.298  10.185  -1.578  1.00  1.00              
ATOM    334  N   ALA    17      17.708  11.213   0.348  1.00  1.00              
ATOM    335  CA  ALA    17      16.332  11.434  -0.061  1.00  1.00              
ATOM    336  CB  ALA    17      15.532  11.991   1.119  1.00  1.00              
ATOM    337  C   ALA    17      16.308  12.366  -1.274  1.00  1.00              
ATOM    338  O   ALA    17      15.640  12.082  -2.266  1.00  1.00              
ATOM    339  N   LEU    18      17.045  13.460  -1.154  1.00  1.00              
ATOM    340  CA  LEU    18      17.052  14.476  -2.193  1.00  1.00              
ATOM    341  CB  LEU    18      17.770  15.736  -1.706  1.00  1.00              
ATOM    342  CG  LEU    18      17.053  16.539  -0.618  1.00  1.00              
ATOM    343  CD1 LEU    18      18.038  17.424   0.149  1.00  1.00              
ATOM    344  CD2 LEU    18      15.895  17.346  -1.206  1.00  1.00              
ATOM    345  C   LEU    18      17.646  13.886  -3.473  1.00  1.00              
ATOM    346  O   LEU    18      17.214  14.223  -4.575  1.00  1.00              
ATOM    347  N   GLU    19      18.627  13.015  -3.286  1.00  1.00              
ATOM    348  CA  GLU    19      19.275  12.364  -4.412  1.00  1.00              
ATOM    349  CB  GLU    19      20.278  11.312  -3.934  1.00  1.00              
ATOM    350  CG  GLU    19      21.150  10.821  -5.091  1.00  1.00              
ATOM    351  CD  GLU    19      22.017   9.636  -4.659  1.00  1.00              
ATOM    352  OE1 GLU    19      21.440   8.537  -4.506  1.00  1.00              
ATOM    353  OE2 GLU    19      23.236   9.856  -4.493  1.00  1.00              
ATOM    354  C   GLU    19      18.230  11.744  -5.341  1.00  1.00              
ATOM    355  O   GLU    19      18.326  11.870  -6.561  1.00  1.00              
ATOM    356  N   LYS    20      17.255  11.088  -4.728  1.00  1.00              
ATOM    357  CA  LYS    20      16.269  10.335  -5.485  1.00  1.00              
ATOM    358  CB  LYS    20      15.594   9.290  -4.594  1.00  1.00              
ATOM    359  CG  LYS    20      16.611   8.271  -4.077  1.00  1.00              
ATOM    360  CD  LYS    20      16.941   7.232  -5.151  1.00  1.00              
ATOM    361  CE  LYS    20      18.421   6.847  -5.105  1.00  1.00              
ATOM    362  NZ  LYS    20      19.247   7.889  -5.755  1.00  1.00              
ATOM    363  C   LYS    20      15.289  11.306  -6.145  1.00  1.00              
ATOM    364  O   LYS    20      14.814  11.057  -7.252  1.00  1.00              
ATOM    365  N   LYS    21      15.014  12.392  -5.438  1.00  1.00              
ATOM    366  CA  LYS    21      14.151  13.433  -5.969  1.00  1.00              
ATOM    367  CB  LYS    21      13.870  14.493  -4.902  1.00  1.00              
ATOM    368  CG  LYS    21      12.935  15.578  -5.440  1.00  1.00              
ATOM    369  CD  LYS    21      11.547  15.008  -5.736  1.00  1.00              
ATOM    370  CE  LYS    21      10.484  16.108  -5.707  1.00  1.00              
ATOM    371  NZ  LYS    21       9.230  15.634  -6.333  1.00  1.00              
ATOM    372  C   LYS    21      14.768  13.998  -7.250  1.00  1.00              
ATOM    373  O   LYS    21      14.075  14.177  -8.251  1.00  1.00              
ATOM    374  N   VAL    22      16.064  14.263  -7.177  1.00  1.00              
ATOM    375  CA  VAL    22      16.781  14.810  -8.316  1.00  1.00              
ATOM    376  CB  VAL    22      18.138  15.356  -7.867  1.00  1.00              
ATOM    377  CG1 VAL    22      19.015  15.703  -9.072  1.00  1.00              
ATOM    378  CG2 VAL    22      17.966  16.567  -6.948  1.00  1.00              
ATOM    379  C   VAL    22      16.897  13.740  -9.403  1.00  1.00              
ATOM    380  O   VAL    22      16.809  14.044 -10.591  1.00  1.00              
ATOM    381  N   GLU    23      17.093  12.508  -8.957  1.00  1.00              
ATOM    382  CA  GLU    23      17.168  11.383  -9.873  1.00  1.00              
ATOM    383  CB  GLU    23      17.399  10.073  -9.116  1.00  1.00              
ATOM    384  CG  GLU    23      17.800   8.949 -10.074  1.00  1.00              
ATOM    385  CD  GLU    23      18.042   7.643  -9.316  1.00  1.00              
ATOM    386  OE1 GLU    23      18.870   7.675  -8.379  1.00  1.00              
ATOM    387  OE2 GLU    23      17.395   6.641  -9.689  1.00  1.00              
ATOM    388  C   GLU    23      15.901  11.307 -10.726  1.00  1.00              
ATOM    389  O   GLU    23      15.972  11.064 -11.930  1.00  1.00              
ATOM    390  N   ALA    24      14.770  11.519 -10.069  1.00  1.00              
ATOM    391  CA  ALA    24      13.487  11.468 -10.750  1.00  1.00              
ATOM    392  CB  ALA    24      12.359  11.511  -9.718  1.00  1.00              
ATOM    393  C   ALA    24      13.402  12.618 -11.755  1.00  1.00              
ATOM    394  O   ALA    24      13.118  12.399 -12.932  1.00  1.00              
ATOM    395  N   LEU    25      13.653  13.819 -11.255  1.00  1.00              
ATOM    396  CA  LEU    25      13.403  15.021 -12.032  1.00  1.00              
ATOM    397  CB  LEU    25      13.318  16.243 -11.116  1.00  1.00              
ATOM    398  CG  LEU    25      12.142  16.267 -10.137  1.00  1.00              
ATOM    399  CD1 LEU    25      12.328  17.361  -9.083  1.00  1.00              
ATOM    400  CD2 LEU    25      10.812  16.408 -10.880  1.00  1.00              
ATOM    401  C   LEU    25      14.464  15.146 -13.127  1.00  1.00              
ATOM    402  O   LEU    25      14.154  15.040 -14.312  1.00  1.00              
ATOM    403  N   GLU    26      15.695  15.369 -12.690  1.00  1.00              
ATOM    404  CA  GLU    26      16.751  15.771 -13.603  1.00  1.00              
ATOM    405  CB  GLU    26      17.987  16.248 -12.837  1.00  1.00              
ATOM    406  CG  GLU    26      19.067  16.750 -13.796  1.00  1.00              
ATOM    407  CD  GLU    26      20.251  17.341 -13.028  1.00  1.00              
ATOM    408  OE1 GLU    26      20.948  16.548 -12.360  1.00  1.00              
ATOM    409  OE2 GLU    26      20.432  18.574 -13.127  1.00  1.00              
ATOM    410  C   GLU    26      17.103  14.620 -14.548  1.00  1.00              
ATOM    411  O   GLU    26      17.032  14.770 -15.767  1.00  1.00              
ATOM    412  N   HIS    27      17.475  13.498 -13.950  1.00  1.00              
ATOM    413  CA  HIS    27      18.045  12.399 -14.710  1.00  1.00              
ATOM    414  CB  HIS    27      18.883  11.492 -13.806  1.00  1.00              
ATOM    415  CG  HIS    27      20.094  12.169 -13.209  1.00  1.00              
ATOM    416  ND1 HIS    27      20.020  12.995 -12.101  1.00  1.00              
ATOM    417  CE1 HIS    27      21.240  13.432 -11.824  1.00  1.00              
ATOM    418  NE2 HIS    27      22.098  12.897 -12.739  1.00  1.00              
ATOM    419  CD2 HIS    27      21.407  12.134 -13.576  1.00  1.00              
ATOM    420  C   HIS    27      16.930  11.644 -15.437  1.00  1.00              
ATOM    421  O   HIS    27      17.047  11.350 -16.625  1.00  1.00              
ATOM    422  N   GLY    28      15.874  11.352 -14.692  1.00  1.00              
ATOM    423  CA  GLY    28      14.737  10.642 -15.252  1.00  1.00              
ATOM    424  C   GLY    28      13.993  11.533 -16.249  1.00  1.00              
ATOM    425  O   GLY    28      13.856  11.174 -17.418  1.00  1.00              
ATOM    426  NT  GLY    28      13.535  12.669 -15.744  1.00  1.00              
ENDDAT
END
