
PFRMAT ABF1
TARGET T0008
AUTHOR 7051-9610-4897 Maxim Totrov, Ruben Abagyan
AUTHOR 7051-9610-4897 The Skirball Institute, NYU Medical Center
BEGDAT 3.1  1  1.0
REMARK  This model of csvl was built with the ICM program 
REMARK  by global optimization of side-chains. 
REMARK              Sequence alignment methods
REMARK  PROGRAM ICM 2.5 (Molsoft, LLC, 1994) 
REMARK  SCORING_MATRIX blosum45
REMARK  GAP_PENALTY 2.8 GAP_EXTENSION 0.15
REMARK                  Core choice methods
REMARK  Core regions were built by the ICM regularization procedure
REMARK  [Abagyan,Totrov,Kuznetsov (1994),  J.Comp.Chem. 15, 488-506]
REMARK                 Side chain building methods
REMARK  The Biased Probability Monte Carlo procedure was used to predict
REMARK  side-chains [Abagyan&Totrov, 1994, JMB, 235, 983-1002].
REMARK  Rotamers assigned from a library depending on residue type 
REMARK  Local energy minimization of full-atom models
REMARK  in the internal coordinate space. Both conjugate gradients and
REMARK  a quasi-Newton algorithms are used for minimization.
REMARK  [Abagyan,Totrov,Kuznetsov (1994),  J.Comp.Chem. 15, 488-506]
REMARK              Error assessment method:
REMARK  analysis of energetic strain [unpublished]
REMARK  Cavities are analyzied with ICM molecular surface 
REMARK  [Totrov&Abagyan,(1996),JSB,116,138-143]
REMARK  Binding energy was evaluated with ICM
ATOM      1  CA  VAL     1      36.509  17.925  15.895  1.00  1.00
ATOM      2  CB  VAL     1      37.040  18.895  16.952  1.00  1.00
ATOM      3  CG1 VAL     1      36.338  20.251  16.855  1.00  1.00
ATOM      4  CG2 VAL     1      36.900  18.305  18.357  1.00  1.00
ATOM      5  C   VAL     1      36.468  18.534  14.492  1.00  1.00
ATOM      6  O   VAL     1      35.399  18.882  13.993  1.00  1.00
ATOM      7  N   GLU     2      37.646  18.644  13.895  1.00  1.00
ATOM      8  CA  GLU     2      37.753  19.154  12.538  1.00  1.00
ATOM      9  CB  GLU     2      39.214  19.214  12.089  1.00  1.00
ATOM     10  CG  GLU     2      39.361  20.042  10.811  1.00  1.00
ATOM     11  CD  GLU     2      40.713  19.784  10.142  1.00  1.00
ATOM     12  OE1 GLU     2      40.693  19.294   8.993  1.00  1.00
ATOM     13  OE2 GLU     2      41.736  20.083  10.796  1.00  1.00
ATOM     14  C   GLU     2      36.920  18.297  11.583  1.00  1.00
ATOM     15  O   GLU     2      36.222  18.825  10.719  1.00  1.00
ATOM     16  N   ALA     3      37.022  16.989  11.770  1.00  1.00
ATOM     17  CA  ALA     3      36.339  16.053  10.894  1.00  1.00
ATOM     18  CB  ALA     3      36.721  14.622  11.279  1.00  1.00
ATOM     19  C   ALA     3      34.830  16.294  10.973  1.00  1.00
ATOM     20  O   ALA     3      34.160  16.400   9.947  1.00  1.00
ATOM     21  N   LEU     4      34.339  16.375  12.201  1.00  1.00
ATOM     22  CA  LEU     4      32.914  16.546  12.428  1.00  1.00
ATOM     23  CB  LEU     4      32.593  16.443  13.920  1.00  1.00
ATOM     24  CG  LEU     4      32.668  15.040  14.527  1.00  1.00
ATOM     25  CD1 LEU     4      32.858  15.109  16.044  1.00  1.00
ATOM     26  CD2 LEU     4      31.444  14.208  14.139  1.00  1.00
ATOM     27  C   LEU     4      32.454  17.858  11.789  1.00  1.00
ATOM     28  O   LEU     4      31.489  17.877  11.028  1.00  1.00
ATOM     29  N   GLU     5      33.168  18.924  12.124  1.00  1.00
ATOM     30  CA  GLU     5      32.804  20.247  11.647  1.00  1.00
ATOM     31  CB  GLU     5      33.739  21.313  12.222  1.00  1.00
ATOM     32  CG  GLU     5      33.446  21.556  13.704  1.00  1.00
ATOM     33  CD  GLU     5      32.123  22.301  13.887  1.00  1.00
ATOM     34  OE1 GLU     5      31.153  21.639  14.315  1.00  1.00
ATOM     35  OE2 GLU     5      32.111  23.516  13.595  1.00  1.00
ATOM     36  C   GLU     5      32.811  20.280  10.117  1.00  1.00
ATOM     37  O   GLU     5      31.924  20.870   9.501  1.00  1.00
ATOM     38  N   LYS     6      33.821  19.640   9.547  1.00  1.00
ATOM     39  CA  LYS     6      33.986  19.636   8.104  1.00  1.00
ATOM     40  CB  LYS     6      35.347  19.049   7.722  1.00  1.00
ATOM     41  CG  LYS     6      35.625  19.237   6.229  1.00  1.00
ATOM     42  CD  LYS     6      36.917  18.526   5.819  1.00  1.00
ATOM     43  CE  LYS     6      38.137  19.193   6.457  1.00  1.00
ATOM     44  NZ  LYS     6      38.688  18.342   7.535  1.00  1.00
ATOM     45  C   LYS     6      32.802  18.912   7.461  1.00  1.00
ATOM     46  O   LYS     6      32.233  19.394   6.482  1.00  1.00
ATOM     47  N   LYS     7      32.466  17.767   8.037  1.00  1.00
ATOM     48  CA  LYS     7      31.354  16.976   7.537  1.00  1.00
ATOM     49  CB  LYS     7      31.247  15.657   8.304  1.00  1.00
ATOM     50  CG  LYS     7      32.337  14.677   7.864  1.00  1.00
ATOM     51  CD  LYS     7      32.388  13.462   8.792  1.00  1.00
ATOM     52  CE  LYS     7      33.546  12.534   8.417  1.00  1.00
ATOM     53  NZ  LYS     7      33.271  11.858   7.129  1.00  1.00
ATOM     54  C   LYS     7      30.076  17.817   7.578  1.00  1.00
ATOM     55  O   LYS     7      29.356  17.908   6.585  1.00  1.00
ATOM     56  N   VAL     8      29.833  18.410   8.738  1.00  1.00
ATOM     57  CA  VAL     8      28.626  19.194   8.940  1.00  1.00
ATOM     58  CB  VAL     8      28.593  19.746  10.366  1.00  1.00
ATOM     59  CG1 VAL     8      27.599  20.903  10.483  1.00  1.00
ATOM     60  CG2 VAL     8      28.271  18.641  11.374  1.00  1.00
ATOM     61  C   VAL     8      28.550  20.288   7.873  1.00  1.00
ATOM     62  O   VAL     8      27.536  20.424   7.190  1.00  1.00
ATOM     63  N   ALA     9      29.635  21.040   7.763  1.00  1.00
ATOM     64  CA  ALA     9      29.661  22.191   6.876  1.00  1.00
ATOM     65  CB  ALA     9      31.014  22.896   6.995  1.00  1.00
ATOM     66  C   ALA     9      29.365  21.734   5.446  1.00  1.00
ATOM     67  O   ALA     9      28.547  22.339   4.755  1.00  1.00
ATOM     68  N   ALA    10      30.046  20.670   5.046  1.00  1.00
ATOM     69  CA  ALA    10      29.928  20.175   3.685  1.00  1.00
ATOM     70  CB  ALA    10      30.928  19.039   3.466  1.00  1.00
ATOM     71  C   ALA    10      28.484  19.738   3.429  1.00  1.00
ATOM     72  O   ALA    10      27.906  20.067   2.394  1.00  1.00
ATOM     73  N   LEU    11      27.942  19.005   4.390  1.00  1.00
ATOM     74  CA  LEU    11      26.653  18.361   4.204  1.00  1.00
ATOM     75  CB  LEU    11      26.427  17.294   5.277  1.00  1.00
ATOM     76  CG  LEU    11      27.246  16.010   5.129  1.00  1.00
ATOM     77  CD1 LEU    11      27.312  15.246   6.452  1.00  1.00
ATOM     78  CD2 LEU    11      26.705  15.142   3.991  1.00  1.00
ATOM     79  C   LEU    11      25.557  19.428   4.158  1.00  1.00
ATOM     80  O   LEU    11      24.618  19.326   3.371  1.00  1.00
ATOM     81  N   GLU    12      25.714  20.429   5.013  1.00  1.00
ATOM     82  CA  GLU    12      24.784  21.545   5.036  1.00  1.00
ATOM     83  CB  GLU    12      25.176  22.562   6.110  1.00  1.00
ATOM     84  CG  GLU    12      24.768  22.074   7.502  1.00  1.00
ATOM     85  CD  GLU    12      25.240  23.048   8.584  1.00  1.00
ATOM     86  OE1 GLU    12      26.422  23.448   8.512  1.00  1.00
ATOM     87  OE2 GLU    12      24.407  23.370   9.459  1.00  1.00
ATOM     88  C   GLU    12      24.711  22.205   3.658  1.00  1.00
ATOM     89  O   GLU    12      23.623  22.439   3.134  1.00  1.00
ATOM     90  N   SER    13      25.884  22.485   3.108  1.00  1.00
ATOM     91  CA  SER    13      25.967  23.124   1.806  1.00  1.00
ATOM     92  CB  SER    13      27.416  23.464   1.451  1.00  1.00
ATOM     93  OG  SER    13      27.519  24.097   0.178  1.00  1.00
ATOM     94  C   SER    13      25.358  22.214   0.737  1.00  1.00
ATOM     95  O   SER    13      24.641  22.682  -0.146  1.00  1.00
ATOM     96  N   LYS    14      25.666  20.931   0.853  1.00  1.00
ATOM     97  CA  LYS    14      25.204  19.959  -0.124  1.00  1.00
ATOM     98  CB  LYS    14      25.844  18.594   0.134  1.00  1.00
ATOM     99  CG  LYS    14      25.558  17.628  -1.018  1.00  1.00
ATOM    100  CD  LYS    14      26.302  16.306  -0.822  1.00  1.00
ATOM    101  CE  LYS    14      25.979  15.323  -1.949  1.00  1.00
ATOM    102  NZ  LYS    14      26.703  15.695  -3.185  1.00  1.00
ATOM    103  C   LYS    14      23.674  19.931  -0.125  1.00  1.00
ATOM    104  O   LYS    14      23.050  19.944  -1.184  1.00  1.00
ATOM    105  N   VAL    15      23.114  19.893   1.076  1.00  1.00
ATOM    106  CA  VAL    15      21.670  19.864   1.227  1.00  1.00
ATOM    107  CB  VAL    15      21.301  19.708   2.704  1.00  1.00
ATOM    108  CG1 VAL    15      19.862  20.158   2.961  1.00  1.00
ATOM    109  CG2 VAL    15      21.518  18.268   3.174  1.00  1.00
ATOM    110  C   VAL    15      21.069  21.119   0.591  1.00  1.00
ATOM    111  O   VAL    15      20.103  21.035  -0.165  1.00  1.00
ATOM    112  N   GLN    16      21.667  22.255   0.921  1.00  1.00
ATOM    113  CA  GLN    16      21.178  23.530   0.424  1.00  1.00
ATOM    114  CB  GLN    16      22.044  24.685   0.931  1.00  1.00
ATOM    115  CG  GLN    16      21.432  26.035   0.554  1.00  1.00
ATOM    116  CD  GLN    16      22.248  27.189   1.140  1.00  1.00
ATOM    117  OE1 GLN    16      23.050  27.819   0.471  1.00  1.00
ATOM    118  NE2 GLN    16      21.998  27.431   2.424  1.00  1.00
ATOM    119  C   GLN    16      21.122  23.517  -1.105  1.00  1.00
ATOM    120  O   GLN    16      20.127  23.932  -1.697  1.00  1.00
ATOM    121  N   ALA    17      22.204  23.036  -1.701  1.00  1.00
ATOM    122  CA  ALA    17      22.312  23.013  -3.149  1.00  1.00
ATOM    123  CB  ALA    17      23.716  22.554  -3.549  1.00  1.00
ATOM    124  C   ALA    17      21.218  22.112  -3.725  1.00  1.00
ATOM    125  O   ALA    17      20.548  22.480  -4.689  1.00  1.00
ATOM    126  N   LEU    18      21.069  20.948  -3.109  1.00  1.00
ATOM    127  CA  LEU    18      20.124  19.959  -3.597  1.00  1.00
ATOM    128  CB  LEU    18      20.295  18.638  -2.843  1.00  1.00
ATOM    129  CG  LEU    18      21.530  17.812  -3.210  1.00  1.00
ATOM    130  CD1 LEU    18      21.846  16.786  -2.119  1.00  1.00
ATOM    131  CD2 LEU    18      21.363  17.156  -4.582  1.00  1.00
ATOM    132  C   LEU    18      18.707  20.531  -3.520  1.00  1.00
ATOM    133  O   LEU    18      17.932  20.408  -4.467  1.00  1.00
ATOM    134  N   GLU    19      18.412  21.145  -2.383  1.00  1.00
ATOM    135  CA  GLU    19      17.095  21.717  -2.162  1.00  1.00
ATOM    136  CB  GLU    19      16.983  22.308  -0.755  1.00  1.00
ATOM    137  CG  GLU    19      16.829  21.204   0.293  1.00  1.00
ATOM    138  CD  GLU    19      16.766  21.792   1.704  1.00  1.00
ATOM    139  OE1 GLU    19      15.811  21.432   2.426  1.00  1.00
ATOM    140  OE2 GLU    19      17.673  22.588   2.028  1.00  1.00
ATOM    141  C   GLU    19      16.789  22.773  -3.226  1.00  1.00
ATOM    142  O   GLU    19      15.673  22.839  -3.738  1.00  1.00
ATOM    143  N   LYS    20      17.801  23.574  -3.528  1.00  1.00
ATOM    144  CA  LYS    20      17.659  24.615  -4.531  1.00  1.00
ATOM    145  CB  LYS    20      18.898  25.512  -4.552  1.00  1.00
ATOM    146  CG  LYS    20      18.689  26.714  -5.476  1.00  1.00
ATOM    147  CD  LYS    20      19.926  27.614  -5.493  1.00  1.00
ATOM    148  CE  LYS    20      19.645  28.919  -6.239  1.00  1.00
ATOM    149  NZ  LYS    20      19.360  28.649  -7.666  1.00  1.00
ATOM    150  C   LYS    20      17.341  23.974  -5.883  1.00  1.00
ATOM    151  O   LYS    20      16.457  24.439  -6.602  1.00  1.00
ATOM    152  N   LYS    21      18.079  22.917  -6.189  1.00  1.00
ATOM    153  CA  LYS    21      17.894  22.215  -7.448  1.00  1.00
ATOM    154  CB  LYS    21      18.950  21.120  -7.610  1.00  1.00
ATOM    155  CG  LYS    21      20.289  21.711  -8.054  1.00  1.00
ATOM    156  CD  LYS    21      20.324  21.912  -9.571  1.00  1.00
ATOM    157  CE  LYS    21      20.690  20.612 -10.288  1.00  1.00
ATOM    158  NZ  LYS    21      20.613  20.789 -11.755  1.00  1.00
ATOM    159  C   LYS    21      16.456  21.699  -7.533  1.00  1.00
ATOM    160  O   LYS    21      15.776  21.907  -8.537  1.00  1.00
ATOM    161  N   VAL    22      16.034  21.037  -6.465  1.00  1.00
ATOM    162  CA  VAL    22      14.711  20.437  -6.431  1.00  1.00
ATOM    163  CB  VAL    22      14.523  19.659  -5.127  1.00  1.00
ATOM    164  CG1 VAL    22      13.044  19.356  -4.878  1.00  1.00
ATOM    165  CG2 VAL    22      15.353  18.374  -5.131  1.00  1.00
ATOM    166  C   VAL    22      13.656  21.526  -6.635  1.00  1.00
ATOM    167  O   VAL    22      12.708  21.342  -7.395  1.00  1.00
ATOM    168  N   GLU    23      13.858  22.637  -5.941  1.00  1.00
ATOM    169  CA  GLU    23      12.953  23.768  -6.060  1.00  1.00
ATOM    170  CB  GLU    23      13.430  24.944  -5.206  1.00  1.00
ATOM    171  CG  GLU    23      12.351  26.025  -5.110  1.00  1.00
ATOM    172  CD  GLU    23      12.313  26.876  -6.380  1.00  1.00
ATOM    173  OE1 GLU    23      13.377  27.439  -6.718  1.00  1.00
ATOM    174  OE2 GLU    23      11.221  26.945  -6.985  1.00  1.00
ATOM    175  C   GLU    23      12.808  24.180  -7.527  1.00  1.00
ATOM    176  O   GLU    23      11.694  24.298  -8.035  1.00  1.00
ATOM    177  N   ALA    24      13.950  24.386  -8.166  1.00  1.00
ATOM    178  CA  ALA    24      13.965  24.915  -9.519  1.00  1.00
ATOM    179  CB  ALA    24      15.403  25.255  -9.919  1.00  1.00
ATOM    180  C   ALA    24      13.321  23.901 -10.466  1.00  1.00
ATOM    181  O   ALA    24      12.495  24.264 -11.302  1.00  1.00
ATOM    182  N   LEU    25      13.724  22.649 -10.304  1.00  1.00
ATOM    183  CA  LEU    25      13.344  21.612 -11.249  1.00  1.00
ATOM    184  CB  LEU    25      14.197  20.360 -11.040  1.00  1.00
ATOM    185  CG  LEU    25      15.675  20.484 -11.415  1.00  1.00
ATOM    186  CD1 LEU    25      16.514  19.423 -10.701  1.00  1.00
ATOM    187  CD2 LEU    25      15.862  20.436 -12.933  1.00  1.00
ATOM    188  C   LEU    25      11.840  21.357 -11.142  1.00  1.00
ATOM    189  O   LEU    25      11.129  21.385 -12.145  1.00  1.00
ATOM    190  N   GLU    26      11.399  21.112  -9.917  1.00  1.00
ATOM    191  CA  GLU    26      10.038  20.658  -9.688  1.00  1.00
ATOM    192  CB  GLU    26       9.808  20.338  -8.209  1.00  1.00
ATOM    193  CG  GLU    26       8.425  19.721  -7.991  1.00  1.00
ATOM    194  CD  GLU    26       8.290  19.167  -6.571  1.00  1.00
ATOM    195  OE1 GLU    26       8.459  19.971  -5.629  1.00  1.00
ATOM    196  OE2 GLU    26       8.021  17.951  -6.460  1.00  1.00
ATOM    197  C   GLU    26       9.038  21.705 -10.184  1.00  1.00
ATOM    198  O   GLU    26       8.111  21.382 -10.924  1.00  1.00
ATOM    199  N   HIS    27       9.261  22.939  -9.756  1.00  1.00
ATOM    200  CA  HIS    27       8.370  24.029 -10.117  1.00  1.00
ATOM    201  CB  HIS    27       8.548  25.214  -9.165  1.00  1.00
ATOM    202  CG  HIS    27       8.298  24.879  -7.714  1.00  1.00
ATOM    203  ND1 HIS    27       9.043  25.420  -6.681  1.00  1.00
ATOM    204  CE1 HIS    27       8.584  24.935  -5.536  1.00  1.00
ATOM    205  NE2 HIS    27       7.552  24.090  -5.820  1.00  1.00
ATOM    206  CD2 HIS    27       7.377  24.056  -7.135  1.00  1.00
ATOM    207  C   HIS    27       8.590  24.407 -11.583  1.00  1.00
ATOM    208  O   HIS    27       7.646  24.423 -12.372  1.00  1.00
ATOM    209  N   GLY    28       9.841  24.704 -11.903  1.00  1.00
ATOM    210  CA  GLY    28      10.198  25.071 -13.263  1.00  1.00
ATOM    211  C   GLY    28      10.475  23.817 -14.096  1.00  1.00
ATOM    212  O   GLY    28      11.631  23.506 -14.379  1.00  1.00
ATOM    213  NT  GLY    28       9.395  23.139 -14.454  1.00  1.00
ENDDAT
END

