
PFRMAT ABF1
TARGET T0008
AUTHOR 7051-9610-4897 Maxim Totrov, Ruben Abagyan
AUTHOR 7051-9610-4897 The Skirball Institute, NYU Medical Center
BEGDAT 3.1  1  1.0
REMARK  This model of csvl was built with the ICM program 
REMARK  by global optimization of side-chains. 
REMARK              Sequence alignment methods
REMARK  PROGRAM ICM 2.5 (Molsoft, LLC, 1994) 
REMARK  SCORING_MATRIX blosum45
REMARK  GAP_PENALTY 2.8 GAP_EXTENSION 0.15
REMARK                  Core choice methods
REMARK  Core regions were built by the ICM regularization procedure
REMARK  [Abagyan,Totrov,Kuznetsov (1994),  J.Comp.Chem. 15, 488-506]
REMARK                 Side chain building methods
REMARK  The Biased Probability Monte Carlo procedure was used to predict
REMARK  side-chains [Abagyan&Totrov, 1994, JMB, 235, 983-1002].
REMARK  Rotamers assigned from a library depending on residue type 
REMARK  Local energy minimization of full-atom models
REMARK  in the internal coordinate space. Both conjugate gradients and
REMARK  a quasi-Newton algorithms are used for minimization.
REMARK  [Abagyan,Totrov,Kuznetsov (1994),  J.Comp.Chem. 15, 488-506]
REMARK              Error assessment method:
REMARK  analysis of energetic strain [unpublished]
REMARK  Cavities are analyzied with ICM molecular surface 
REMARK  [Totrov&Abagyan,(1996),JSB,116,138-143]
ATOM      5  CA  VAL     1      36.576  17.968  15.777  1.00  1.00
ATOM      6  CB  VAL     1      37.224  19.014  16.686  1.00  1.00
ATOM      7  CG1 VAL     1      36.519  20.365  16.557  1.00  1.00
ATOM      8  CG2 VAL     1      37.241  18.541  18.141  1.00  1.00
ATOM      9  C   VAL     1      36.370  18.466  14.345  1.00  1.00
ATOM     10  O   VAL     1      35.251  18.795  13.953  1.00  1.00
ATOM     11  N   GLU     2      37.467  18.506  13.602  1.00  1.00
ATOM     12  CA  GLU     2      37.411  18.903  12.206  1.00  1.00
ATOM     13  CB  GLU     2      38.801  18.864  11.569  1.00  1.00
ATOM     14  CG  GLU     2      38.787  19.508  10.181  1.00  1.00
ATOM     15  CD  GLU     2      40.140  19.345   9.487  1.00  1.00
ATOM     16  OE1 GLU     2      41.108  19.969   9.974  1.00  1.00
ATOM     17  OE2 GLU     2      40.177  18.599   8.484  1.00  1.00
ATOM     18  C   GLU     2      36.431  18.013  11.439  1.00  1.00
ATOM     19  O   GLU     2      35.624  18.506  10.652  1.00  1.00
ATOM     20  N   ALA     3      36.534  16.717  11.695  1.00  1.00
ATOM     21  CA  ALA     3      35.715  15.747  10.988  1.00  1.00
ATOM     22  CB  ALA     3      36.144  14.333  11.383  1.00  1.00
ATOM     23  C   ALA     3      34.239  16.015  11.291  1.00  1.00
ATOM     24  O   ALA     3      33.405  16.009  10.387  1.00  1.00
ATOM     25  N   LEU     4      33.962  16.243  12.566  1.00  1.00
ATOM     26  CA  LEU     4      32.596  16.476  13.005  1.00  1.00
ATOM     27  CB  LEU     4      32.527  16.537  14.532  1.00  1.00
ATOM     28  CG  LEU     4      32.633  15.197  15.263  1.00  1.00
ATOM     29  CD1 LEU     4      33.110  15.394  16.703  1.00  1.00
ATOM     30  CD2 LEU     4      31.310  14.431  15.197  1.00  1.00
ATOM     31  C   LEU     4      32.049  17.726  12.314  1.00  1.00
ATOM     32  O   LEU     4      30.939  17.711  11.784  1.00  1.00
ATOM     33  N   GLU     5      32.853  18.779  12.342  1.00  1.00
ATOM     34  CA  GLU     5      32.451  20.044  11.751  1.00  1.00
ATOM     35  CB  GLU     5      33.529  21.110  11.951  1.00  1.00
ATOM     36  CG  GLU     5      33.536  21.620  13.393  1.00  1.00
ATOM     37  CD  GLU     5      34.642  22.656  13.603  1.00  1.00
ATOM     38  OE1 GLU     5      34.284  23.838  13.797  1.00  1.00
ATOM     39  OE2 GLU     5      35.821  22.242  13.566  1.00  1.00
ATOM     40  C   GLU     5      32.131  19.858  10.266  1.00  1.00
ATOM     41  O   GLU     5      31.106  20.336   9.784  1.00  1.00
ATOM     42  N   LYS     6      33.029  19.163   9.583  1.00  1.00
ATOM     43  CA  LYS     6      32.875  18.940   8.156  1.00  1.00
ATOM     44  CB  LYS     6      34.131  18.284   7.577  1.00  1.00
ATOM     45  CG  LYS     6      35.255  19.308   7.408  1.00  1.00
ATOM     46  CD  LYS     6      36.539  18.636   6.916  1.00  1.00
ATOM     47  CE  LYS     6      37.604  19.677   6.569  1.00  1.00
ATOM     48  NZ  LYS     6      38.889  19.017   6.248  1.00  1.00
ATOM     49  C   LYS     6      31.593  18.143   7.904  1.00  1.00
ATOM     50  O   LYS     6      30.845  18.441   6.975  1.00  1.00
ATOM     51  N   LYS     7      31.380  17.144   8.748  1.00  1.00
ATOM     52  CA  LYS     7      30.220  16.281   8.608  1.00  1.00
ATOM     53  CB  LYS     7      30.296  15.117   9.598  1.00  1.00
ATOM     54  CG  LYS     7      29.213  14.076   9.305  1.00  1.00
ATOM     55  CD  LYS     7      29.035  13.122  10.488  1.00  1.00
ATOM     56  CE  LYS     7      30.270  12.238  10.670  1.00  1.00
ATOM     57  NZ  LYS     7      30.019  11.203  11.699  1.00  1.00
ATOM     58  C   LYS     7      28.947  17.119   8.741  1.00  1.00
ATOM     59  O   LYS     7      28.056  17.038   7.897  1.00  1.00
ATOM     60  N   VAL     8      28.902  17.905   9.807  1.00  1.00
ATOM     61  CA  VAL     8      27.723  18.702  10.100  1.00  1.00
ATOM     62  CB  VAL     8      27.900  19.425  11.436  1.00  1.00
ATOM     63  CG1 VAL     8      26.889  20.565  11.581  1.00  1.00
ATOM     64  CG2 VAL     8      27.794  18.446  12.607  1.00  1.00
ATOM     65  C   VAL     8      27.457  19.657   8.934  1.00  1.00
ATOM     66  O   VAL     8      26.317  19.805   8.497  1.00  1.00
ATOM     67  N   ALA     9      28.528  20.280   8.464  1.00  1.00
ATOM     68  CA  ALA     9      28.418  21.247   7.385  1.00  1.00
ATOM     69  CB  ALA     9      29.780  21.901   7.145  1.00  1.00
ATOM     70  C   ALA     9      27.877  20.550   6.135  1.00  1.00
ATOM     71  O   ALA     9      26.992  21.076   5.461  1.00  1.00
ATOM     72  N   ALA    10      28.431  19.378   5.863  1.00  1.00
ATOM     73  CA  ALA    10      28.080  18.646   4.657  1.00  1.00
ATOM     74  CB  ALA    10      28.948  17.390   4.552  1.00  1.00
ATOM     75  C   ALA    10      26.585  18.322   4.680  1.00  1.00
ATOM     76  O   ALA    10      25.888  18.523   3.686  1.00  1.00
ATOM     77  N   LEU    11      26.137  17.827   5.824  1.00  1.00
ATOM     78  CA  LEU    11      24.744  17.441   5.978  1.00  1.00
ATOM     79  CB  LEU    11      24.547  16.649   7.272  1.00  1.00
ATOM     80  CG  LEU    11      25.284  15.311   7.357  1.00  1.00
ATOM     81  CD1 LEU    11      25.326  14.800   8.799  1.00  1.00
ATOM     82  CD2 LEU    11      24.670  14.285   6.403  1.00  1.00
ATOM     83  C   LEU    11      23.861  18.687   5.878  1.00  1.00
ATOM     84  O   LEU    11      22.823  18.665   5.218  1.00  1.00
ATOM     85  N   GLU    12      24.304  19.742   6.545  1.00  1.00
ATOM     86  CA  GLU    12      23.521  20.964   6.619  1.00  1.00
ATOM     87  CB  GLU    12      24.214  22.008   7.497  1.00  1.00
ATOM     88  CG  GLU    12      23.330  23.242   7.683  1.00  1.00
ATOM     89  CD  GLU    12      24.000  24.262   8.605  1.00  1.00
ATOM     90  OE1 GLU    12      24.382  25.333   8.085  1.00  1.00
ATOM     91  OE2 GLU    12      24.117  23.949   9.810  1.00  1.00
ATOM     92  C   GLU    12      23.259  21.513   5.216  1.00  1.00
ATOM     93  O   GLU    12      22.136  21.899   4.895  1.00  1.00
ATOM     94  N   SER    13      24.316  21.532   4.416  1.00  1.00
ATOM     95  CA  SER    13      24.218  22.043   3.059  1.00  1.00
ATOM     96  CB  SER    13      25.576  22.001   2.356  1.00  1.00
ATOM     97  OG  SER    13      25.939  20.676   1.974  1.00  1.00
ATOM     98  C   SER    13      23.186  21.236   2.269  1.00  1.00
ATOM     99  O   SER    13      22.384  21.804   1.529  1.00  1.00
ATOM    100  N   LYS    14      23.240  19.925   2.453  1.00  1.00
ATOM    101  CA  LYS    14      22.299  19.037   1.790  1.00  1.00
ATOM    102  CB  LYS    14      22.645  17.576   2.082  1.00  1.00
ATOM    103  CG  LYS    14      23.677  17.046   1.084  1.00  1.00
ATOM    104  CD  LYS    14      23.975  15.567   1.337  1.00  1.00
ATOM    105  CE  LYS    14      24.748  14.956   0.166  1.00  1.00
ATOM    106  NZ  LYS    14      23.823  14.577  -0.924  1.00  1.00
ATOM    107  C   LYS    14      20.873  19.423   2.188  1.00  1.00
ATOM    108  O   LYS    14      20.017  19.622   1.327  1.00  1.00
ATOM    109  N   VAL    15      20.662  19.518   3.492  1.00  1.00
ATOM    110  CA  VAL    15      19.342  19.826   4.016  1.00  1.00
ATOM    111  CB  VAL    15      19.397  19.933   5.542  1.00  1.00
ATOM    112  CG1 VAL    15      18.135  20.603   6.090  1.00  1.00
ATOM    113  CG2 VAL    15      19.609  18.559   6.180  1.00  1.00
ATOM    114  C   VAL    15      18.817  21.097   3.347  1.00  1.00
ATOM    115  O   VAL    15      17.732  21.095   2.767  1.00  1.00
ATOM    116  N   GLN    16      19.611  22.153   3.448  1.00  1.00
ATOM    117  CA  GLN    16      19.190  23.456   2.961  1.00  1.00
ATOM    118  CB  GLN    16      20.281  24.504   3.187  1.00  1.00
ATOM    119  CG  GLN    16      20.389  24.874   4.667  1.00  1.00
ATOM    120  CD  GLN    16      21.561  25.827   4.910  1.00  1.00
ATOM    121  OE1 GLN    16      22.191  26.324   3.992  1.00  1.00
ATOM    122  NE2 GLN    16      21.817  26.053   6.196  1.00  1.00
ATOM    123  C   GLN    16      18.807  23.372   1.482  1.00  1.00
ATOM    124  O   GLN    16      17.772  23.896   1.074  1.00  1.00
ATOM    125  N   ALA    17      19.664  22.708   0.719  1.00  1.00
ATOM    126  CA  ALA    17      19.489  22.645  -0.722  1.00  1.00
ATOM    127  CB  ALA    17      20.731  22.020  -1.360  1.00  1.00
ATOM    128  C   ALA    17      18.213  21.864  -1.043  1.00  1.00
ATOM    129  O   ALA    17      17.382  22.321  -1.827  1.00  1.00
ATOM    130  N   LEU    18      18.097  20.700  -0.421  1.00  1.00
ATOM    131  CA  LEU    18      17.133  19.707  -0.865  1.00  1.00
ATOM    132  CB  LEU    18      17.520  18.318  -0.352  1.00  1.00
ATOM    133  CG  LEU    18      18.839  17.751  -0.883  1.00  1.00
ATOM    134  CD1 LEU    18      19.356  16.630   0.020  1.00  1.00
ATOM    135  CD2 LEU    18      18.694  17.296  -2.337  1.00  1.00
ATOM    136  C   LEU    18      15.728  20.146  -0.449  1.00  1.00
ATOM    137  O   LEU    18      14.761  19.910  -1.173  1.00  1.00
ATOM    138  N   GLU    19      15.658  20.776   0.714  1.00  1.00
ATOM    139  CA  GLU    19      14.385  21.236   1.241  1.00  1.00
ATOM    140  CB  GLU    19      14.585  22.068   2.509  1.00  1.00
ATOM    141  CG  GLU    19      14.700  21.170   3.743  1.00  1.00
ATOM    142  CD  GLU    19      14.937  22.001   5.006  1.00  1.00
ATOM    143  OE1 GLU    19      15.805  22.898   4.940  1.00  1.00
ATOM    144  OE2 GLU    19      14.244  21.720   6.007  1.00  1.00
ATOM    145  C   GLU    19      13.625  22.031   0.177  1.00  1.00
ATOM    146  O   GLU    19      12.418  21.860   0.013  1.00  1.00
ATOM    147  N   LYS    20      14.364  22.884  -0.518  1.00  1.00
ATOM    148  CA  LYS    20      13.764  23.751  -1.517  1.00  1.00
ATOM    149  CB  LYS    20      14.785  24.771  -2.024  1.00  1.00
ATOM    150  CG  LYS    20      15.154  25.771  -0.925  1.00  1.00
ATOM    151  CD  LYS    20      16.115  26.837  -1.453  1.00  1.00
ATOM    152  CE  LYS    20      17.557  26.324  -1.450  1.00  1.00
ATOM    153  NZ  LYS    20      18.128  26.391  -0.087  1.00  1.00
ATOM    154  C   LYS    20      13.147  22.896  -2.625  1.00  1.00
ATOM    155  O   LYS    20      12.023  23.147  -3.056  1.00  1.00
ATOM    156  N   LYS    21      13.911  21.902  -3.056  1.00  1.00
ATOM    157  CA  LYS    21      13.479  21.045  -4.147  1.00  1.00
ATOM    158  CB  LYS    21      14.628  20.147  -4.610  1.00  1.00
ATOM    159  CG  LYS    21      15.721  20.967  -5.299  1.00  1.00
ATOM    160  CD  LYS    21      16.907  20.082  -5.689  1.00  1.00
ATOM    161  CE  LYS    21      16.536  19.142  -6.837  1.00  1.00
ATOM    162  NZ  LYS    21      16.436  17.747  -6.354  1.00  1.00
ATOM    163  C   LYS    21      12.229  20.273  -3.720  1.00  1.00
ATOM    164  O   LYS    21      11.244  20.224  -4.454  1.00  1.00
ATOM    165  N   VAL    22      12.310  19.689  -2.533  1.00  1.00
ATOM    166  CA  VAL    22      11.238  18.841  -2.041  1.00  1.00
ATOM    167  CB  VAL    22      11.658  18.173  -0.731  1.00  1.00
ATOM    168  CG1 VAL    22      10.451  17.567  -0.012  1.00  1.00
ATOM    169  CG2 VAL    22      12.738  17.116  -0.975  1.00  1.00
ATOM    170  C   VAL    22       9.959  19.670  -1.907  1.00  1.00
ATOM    171  O   VAL    22       8.874  19.203  -2.251  1.00  1.00
ATOM    172  N   GLU    23      10.129  20.884  -1.405  1.00  1.00
ATOM    173  CA  GLU    23       9.009  21.799  -1.265  1.00  1.00
ATOM    174  CB  GLU    23       9.453  23.116  -0.625  1.00  1.00
ATOM    175  CG  GLU    23       8.255  24.030  -0.362  1.00  1.00
ATOM    176  CD  GLU    23       8.683  25.295   0.383  1.00  1.00
ATOM    177  OE1 GLU    23       8.616  25.268   1.631  1.00  1.00
ATOM    178  OE2 GLU    23       9.068  26.260  -0.311  1.00  1.00
ATOM    179  C   GLU    23       8.351  22.045  -2.625  1.00  1.00
ATOM    180  O   GLU    23       7.131  21.954  -2.754  1.00  1.00
ATOM    181  N   ALA    24       9.189  22.353  -3.604  1.00  1.00
ATOM    182  CA  ALA    24       8.698  22.709  -4.924  1.00  1.00
ATOM    183  CB  ALA    24       9.866  23.176  -5.795  1.00  1.00
ATOM    184  C   ALA    24       7.961  21.512  -5.529  1.00  1.00
ATOM    185  O   ALA    24       6.880  21.666  -6.095  1.00  1.00
ATOM    186  N   LEU    25       8.576  20.347  -5.389  1.00  1.00
ATOM    187  CA  LEU    25       8.042  19.141  -5.999  1.00  1.00
ATOM    188  CB  LEU    25       9.072  18.011  -5.942  1.00  1.00
ATOM    189  CG  LEU    25      10.326  18.203  -6.796  1.00  1.00
ATOM    190  CD1 LEU    25      11.506  17.416  -6.222  1.00  1.00
ATOM    191  CD2 LEU    25      10.055  17.843  -8.258  1.00  1.00
ATOM    192  C   LEU    25       6.706  18.790  -5.339  1.00  1.00
ATOM    193  O   LEU    25       5.720  18.529  -6.027  1.00  1.00
ATOM    194  N   GLU    26       6.718  18.795  -4.014  1.00  1.00
ATOM    195  CA  GLU    26       5.562  18.351  -3.254  1.00  1.00
ATOM    196  CB  GLU    26       5.892  18.248  -1.764  1.00  1.00
ATOM    197  CG  GLU    26       4.746  17.591  -0.992  1.00  1.00
ATOM    198  CD  GLU    26       5.125  17.374   0.474  1.00  1.00
ATOM    199  OE1 GLU    26       4.643  18.171   1.308  1.00  1.00
ATOM    200  OE2 GLU    26       5.888  16.418   0.727  1.00  1.00
ATOM    201  C   GLU    26       4.378  19.291  -3.490  1.00  1.00
ATOM    202  O   GLU    26       3.262  18.839  -3.739  1.00  1.00
ATOM    203  N   HIS    27       4.663  20.582  -3.403  1.00  1.00
ATOM    204  CA  HIS    27       3.640  21.591  -3.623  1.00  1.00
ATOM    205  CB  HIS    27       4.170  22.985  -3.285  1.00  1.00
ATOM    206  CG  HIS    27       3.169  24.094  -3.507  1.00  1.00
ATOM    207  ND1 HIS    27       3.037  24.753  -4.717  1.00  1.00
ATOM    208  CE1 HIS    27       2.082  25.664  -4.595  1.00  1.00
ATOM    209  NE2 HIS    27       1.598  25.599  -3.321  1.00  1.00
ATOM    210  CD2 HIS    27       2.253  24.650  -2.663  1.00  1.00
ATOM    211  C   HIS    27       3.116  21.487  -5.057  1.00  1.00
ATOM    212  O   HIS    27       1.916  21.329  -5.274  1.00  1.00
ATOM    213  N   GLY    28       4.043  21.579  -5.999  1.00  1.00
ATOM    214  CA  GLY    28       3.689  21.505  -7.407  1.00  1.00
ATOM    215  C   GLY    28       3.600  20.045  -7.856  1.00  1.00
ATOM    216  O   GLY    28       4.486  19.557  -8.556  1.00  1.00
ATOM    217  NT  GLY    28       2.526  19.397  -7.427  1.00  1.00
ENDDAT
END
END

