7th Community Wide Experiment on the
Critical Assessment of Techniques for Protein Structure Prediction
Asilomar Conference Center, Pacific Grove, CA
November 26-30, 2006

CASP 7 targets (T0283-T0386): short description

Target

# res

Resolution

Domain definition

Classification

Description

T0283

112

2.04

1-97

TBM

JCSG target 10176605, Bacillus halodurans, PDB code 2HH6

T0284

287

N/A

4-253

TBM

Hypothetical protein, Pseudomonas aeruginosa PAO1

T0285

125

2.6

7-105

TBM

Extracytoplasmic domain from histidine kinase, Cellvibrio japonicus

T0286

205

1.2

3-204

TBM

Cellulose esterase family, Clostridium thermocellum

T0287

199

2.3

21-181

FM

HP0534, cag pathogenicity island protein, Helicobacter pylori

T0288

93

1.12

1-88

HA-TBM

SGC target PRKCAB, Homo sapiens, PDB code 2GZV

T0289

312

1.8

D1: 4-223,298-310

TBM

CESG target, Rattus norvegicus, PDB code 2GU2

D2: 224-297

TBM

T0290

173

1.8

1-173

HA-TBM

SGC target PPI64, Homo sapiens, PDB code 2GW2

T0291

310

1.77

1-310

HA-TBM

SGC target EPHA3, Homo sapiens, PDB code 2GSF

T0292

277

2.2

D1: 1-86

HA-TBM

SGC target NEK2A, Homo sapiens, PDB code 2CL1

D2: 87-277

HA-TBM

T0293

250

2

4-53,61-127,135-147,182-249

TBM

SGC target MGC3329, Homo sapiens, PDB code 2H00

T0295

275

1.89

D1: 1-180

HA-TBM

SGC target Pf-Ksga, Plasmodium falciparum, PDB code 2H1R

D2: 181-275

HA-TBM

T0296

445

2.7

1-440

FM

MCSG target UPF0210, Streptococcus pneumoniae, PDB code 2HA9

T0297

211

1.5

1-211

TBM

MCSG target APC80509, Streptococcus pneumoniae, PDB code 2HSJ

T0298

336

2.2

D1: 3-129,316-336

TBM

MCSG target apc5631, Pseudomonas aeruginosa PAO1, PDB code 2HJS

D2: 130-315

TBM

T0299

180

1.4

D1: 1-78,168-180

TBM

MCSG target APC80351, Streptococcus pneumoniae TIGR4, PDB code 2HIY

D2: 79-167

TBM

T0300

102

2.7

7-102

FM

NESG target BQLF2, Murine herpesvirus, PDB code 2H3R

T0301

395

1.95

D1: 1-182,378-395

TBM

JCSG target, Pseudomonas aeruginosa, PDB code 2H9F

D2: 187-377

TBM

T0302

132

NMR

3-131

HA-TBM

SGC target RGS18A, Homo sapiens, PDB code 2JM5

T0303

224

1.9

D1: 1-17,95-224

HA-TBM

JCSG target COG0546, Haemophilus somnus, PDB code 2HSZ

D2: 18-94

TBM

T0304

122

2.1

17-117

TBM/FM

NESG target, Escherichia coli, PDB code 2H28

T0305

297

1.55

3-297

HA-TBM

SGC target PTPRGA, Homo sapiens, PDB code 2H4V

T0306

95

2.4

1-95

TBM

NESG target ER316, Escherichia coli, PDB code 2HD3

T0307

133

2.01

10-132

FM

MCSG target PG_1108, Porphyromonas gingivalis, PDB code 2H5N

T0308

165

2

1-165

HA-TBM

SGC target ARL6, Homo sapiens, PDB code 2H57

T0309

76

2.8

2-63

FM

NESG target SR415, Bacillus subtilis, PDB code 2H4O

T0311

97

1.88

8-71

HA-TBM

NESG target ER390, Escherichia coli, PDB codes 2ICP or 2ICT

T0312

146

2

9-140

TBM

NESG target GR103, Archaeoglobus fulgidus, PDB code 2H6L

T0313

322

1.85

1-322

HA-TBM

SGC target KIFC3, Homo sapiens, PDB code 2H58

T0314

106

NMR

1-103

FM

NESG target PaT4, Pseudomonas aeruginosa, PDB code 2HG6

T0315

257

2.2

2-254

HA-TBM

NESG target, Staphylococcus aureus, PDB code 2GZX

T0316

373

2.41

D1: 2-193

TBM

MCSG target, Streptococcus pneumoniae, PDB code 2HMA

D2: 220-283

FM

D3: 284-373

TBM

T0317

163

2

10-158

HA-TBM

Hypothetical protein LOC67446, Mus musculus, PDB code 2HCM

T0318

491

2

D1: 2-155

TBM

Predicted aminopeptidase, Caenorhabditis elegans, PDB code 2HB6

D2: 156-490

TBM

T0319

135

N/A

1-135

FM

YSG target TRM112, Saccharomyces cerevisiae, PDB code 2J6A

T0320

306

1.9

D1: 1-227

TBM

YSG target FAD1, Saccharomyces cerevisiae

D2: 228-304

decoration

T0321

251

2.01

D1: 1-96

TBM

JCSG target, Desulfitobacterium hafniense, PDB code 2H1Q

D2: 97-251

TBM/FM

T0322

157

1.85

16-143

TBM

JCSG target, Caulobacter crescentus, PDB code 2HBO

T0323

221

2.55

D1: 1-33,150-217

TBM

JCSG target, Bacillus halodurans, PDB code 2H56

D2: 34-149

TBM

T0324

208

1.5

D1: 1-16,82-207

HA-TBM

JCSG target, Lactobacillus plantarum, PDB code 2HDO

D2: 17-81

HA-TBM

T0325

262

1.7

2-262

TBM

JCSG target, Enterococcus faecalis, PDB code 2I5I

T0326

304

2.52

2-296

HA-TBM

JCSG target, Thermotoga maritima, PDB code 2H2W

T0327

102

NMR

5-77

TBM

NESG target, Bacillus subtlis, PDB code 2HGC

T0328

311

2.75

5-311

HA-TBM

JCSG target, Shewanella oneidensis, PDB code 2HAG

T0329

239

1.51

D1: 1-16,109-156,163-239

TBM

JCSG target, Lactobacillus delbrueckii, PDB code 2HI0

D2: 17-108

TBM

T0330

233

1.8

D1: 2-16,92-229

TBM

JCSG target, Chlorobium tepidum, PDB code 2HCF

D2: 17-91

TBM

T0331

149

2

1-149

TBM

JCSG target, Streptococcus suis, PDB code 2HHZ

T0332

159

1.6

7-159

HA-TBM

SGC target, Homo sapiens, PDB code 2HA8

T0333

376

1.9

D1: 1-190,360-375

TBM

CESG target, Micromonospora echinospora

D2: 212-359

TBM

T0334

530

2.49

3-528

HA-TBM

CESG target, Saccharothrix aerocolonigenes

T0335

85

NMR

5-40

TBM

NESG target, Bacillus subtilis, PDB code 2HEP

T0338

256

1.8

D1: 1-143

TBM

SGC target, Homo sapiens, PDB code 2IVX

D2: 144-256

TBM

T0339

416

2.1

D1: 1-8,289-416

TBM

SGC target, Homo sapiens, PDB code 2HDY

D2: 9-288

HA-TBM

T0340

90

1.45

4-85

HA-TBM

SGC target, Homo sapiens, PDB code 2HE4

T0341

259

2.2

D1: 7-74,179-259

TBM

CESG target, Mus musculus, PDB code 2HO4

D2: 75-178

TBM

T0342

188

2.01

14-135

TBM

CESG target, Homo sapiens, PDB code 2I5T

T0345

185

2.1

1-185

HA-TBM

SGC target, Homo sapiens, PDB code 2HE3

T0346

172

2

1-172

HA-TBM

SGC target, Homo sapiens, PDB code 2HE9

T0347

205

2.61

D1: 7-37,51-108

TBM

MCSG target, Agrobacterium tumefaciens, PDB code 2HWJ

D2: 134-204

FM

T0348

68

1.9

2-62

TBM/FM

NESG target, Chromobacterium violaceum, PDB code 2HF1

T0349

75

NMR

1-29,45-72

TBM

NESG target, Pseudomonas aeruginosa, PDB code 2HFV

T0350

117

NMR

1-21,36-105

FM

NESG target, Bacillus subtilis, PDB code 2HC5

T0351

117

NMR

1-56

TBM

NESG target, Bacillus subtilis, PDB code 2HG7

T0353

85

NMR

1-83

FM

NESG target, Nitrosomonas europaea, PDB code 2HFQ

T0354

130

2.8

1-122

TBM

NESG target, Chromobacterium violaceum, PDB code 2ID1

T0356

505

2.9

D1: 7-96,314-347

FM

NESG target, Escherichia coli, 2IDB

D2: 122-313

TBM

D3: 348-467

FM

T0357

141

NMR

2-133

TBM

NESG target, Archaeoglobus fulgidus, PDB code 2HI6

T0358

87

NMR

10-74

TBM

NESG target, Escherichia coli, PDB code 2HJJ

T0359

97

1.35

1-94

HA-TBM

SGC target, Homo sapiens, PDB code 2IWN

T0360

141


20-116

TBM

MCSG target, Neisseria meningitidis, PDB code 2HXJ

T0361

169

2.5

3-136,145-168

FM

MCSG target, Shigella flexneri, PDB code 2HKT

T0362

151

1.5

1-144

TBM

JCSG target, Prochlorococcus marinus, PDB code 2HX5

T0363

97

2.1

11-56

TBM

Hypothetical protein, Haemophilus influenzae, PDB code 2HJ1

T0364

156

2

1-150

TBM

JCSG target, Pseudomonas putida, PDB code 2HLJ

T0365

226

2.32

14-226

TBM

JCSG target, Shewanella oneidensis, PDB code 2IIU

T0366

106

1.7

11-18,23-98

HA-TBM

SGC target, Homo sapiens, PDB codes 2IWO or 2IWP

T0367

125

2.15

1-123

HA-TBM

JCSG target, Archaeoglobus fulgidus, PDB code 2HSB

T0368

174

1.95

1-157

TBM

JCSG target, Chlorobium tepidum, PDB code 2HR2

T0369

148

2.54

1-147

TBM

JCSG target, Exiguobacterium, PDB code 2HKV

T0370

154

1.7

8-151

TBM

JCSG target, Streptomyces avermitilis, PDB code 2IAB

T0371

283

2

D1: 1-81,203-283

TBM

JCSG target, Cytophaga hutchinsoni, PDB code 2HX1

D2: 82-202

TBM

T0372

305

2.1

D1: 1-117,290-298

TBM

MCSG target, Bacteroides thetaiotaomicron, PDB code 2HQY

D2: 118-289

TBM

T0373

147

1.8

2-145

TBM

MCSG target, Pseudomonas aeruginosa, PDB code 2HR3

T0374

160

2.4

1-160

TBM

MCSG target, Pseudomonas aeruginosa, PDB code 2I6C

T0375

296

1.3

1-296

TBM

SGC target, Homo sapiens, PDB code 2HLZ

T0376

321

1.85

4-309

TBM

MCSG target, Agrobacterium tumefaciens, PDB code 2HMC

T0378

254

1.85

D1: 1-89

TBM

MCSG target, Porphyromonas gingivalis, PDB code 2I6D

D2: 100-223,237-254

TBM

T0379

208

2.4

D1: 1-16,84-207

TBM

MCSG target, Porphyromonas gingivalis, PDB code 2I6X

D2: 17-83

TBM

T0380

145

2

2-143

TBM

JCSG target, Clostridium acetobutylicum, PDB code 2HQ7

T0381

265

2.1

D1: 17-77

TBM

MCSG target, Rhodococcus sp. DK17, PDB code 2IA2

D2: 90-265

TBM

T0382

123

2

4-122

TBM/FM

MCSG target, Rhodopseudomonas palustris, PDB code 2I9C

T0383

127

1.63

3-127

TBM

MCSG target, Streptococcus pneumoniae, PDB code 2HNG

T0384

325

2

1-152,172-320

TBM

MCSG target, Streptococcus pneumoniae, PDB codes 2HO3 or 2HO5

T0385

162

2

17-151

TBM

LANL target, Mycobacterium tuberculosis, PDB code 2IB0

T0386

299

2.8

D1: 13-218

TBM

Putative cell filamentation protein, Bartonella henselae

D2: 219-299

FM