3D Structures - Sequence Dependent Analysis
All 3D models for target: T0133
Group name: 039
Total number of ALL models submitted for target T0133 : 386
Number of models submitted by group 039 : 5
BLUE - Model -
T0133TS039_4
CYAN - Other models submitted by group: 039
BROWN - Models submitted by other groups
GDT analysis: largest set of CA atoms (percent of the modeled structure) that can fit under
DISTANCE cutoff: 0.5A, 1.0A, 1.5A, ... , 10.0A
Largest set of residues from the Model T0133TS039_4 that can fit under DISTANCE cutoff :
19 percent of residues ( 55 residues ) fits under 1A with local RMSD 0.64
34 percent of residues ( 100 residues ) fits under 2A with local RMSD 1.32
48 percent of residues ( 142 residues ) fits under 4A with local RMSD 2.00
55 percent of residues ( 162 residues ) fits under 6A with local RMSD 2.68
Percent of the structure predicted: 85.32 ( CA atoms: Model 250 , Target 293 )
Each residue in the prediction is assigned to the largest set of residues containing that residue and deviating from the target by no more than a specified CA distance cutoff.
For a given residue the distance cutoff under which the set of 5, 10 and 50 percent of the modeled structure can be fitted
is used for graphical presentation (three blue lines).
Target (top row): helices - PURPLE , strands - GREEN
Model (second row): helices - PURPLE , strands - GREEN
Target-Model GDT(5,10,50): BLUE
Bad model or residues not predicted: BLACK
TXT results,
LCS results (see GDT and LCS description),
Rasmol Plot
Adam Zemla, 10/21/2002, adamz@llnl.gov